>ref|NP_223749.1| putative lipopolysaccharide biosynthesis protein [Helicobacter
           pylori J99]
          Length = 398

 Score =  618 bits (1593), Expect = e-178
 Identities = 315/431 (73%), Positives = 340/431 (78%), Gaps = 35/431 (8%)

Query: 1   MTSASSHSFKEQDFHIPIAFAFDKNYLIPAGACLYSLLESIAKANKKIRYTLHALVVGLN 60
           MTSASSHSFKEQDFHIPIAFAFDKNYLIPAGAC+YSLLESIAKANKKIRYTLHALVVGLN
Sbjct: 1   MTSASSHSFKEQDFHIPIAFAFDKNYLIPAGACIYSLLESIAKANKKIRYTLHALVVGLN 60

Query: 61  EEDKAKLNQITEPFKEFAALEVRDIESFLDTIPNPFDEDFTKRFSKMVLVKYFLADLFPK 120
           EEDK KLNQITEPFKEFA LEV+DIE FLDTIPNPFDEDFTKRFSKMVLVKYFLADLFPK
Sbjct: 61  EEDKTKLNQITEPFKEFAVLEVKDIEPFLDTIPNPFDEDFTKRFSKMVLVKYFLADLFPK 120

Query: 121 YSKMVWSDVDVIFCNEFSADFLNLEENDENYFYGVLEVEKHHMMEGFLFCNLDYQRKKNF 180
           YSKMVWSDVDVIFCNEFSADFLN++ENDENYFYGVLEVEKHHMMEGFLFCNLDYQRKKNF
Sbjct: 121 YSKMVWSDVDVIFCNEFSADFLNIKENDENYFYGVLEVEKHHMMEGFLFCNLDYQRKKNF 180

Query: 181 TLRMHELLRGNEAKGELDFTKWCWPNMKALGIEYCVFPYYYTIKDFSNAYLNENYKKTIL 240
           TLRMHELL+GNEAKGELDFTKWCWPNMKALGIEYCVFPYYYTIKDFSNAYLNENYKKTIL
Sbjct: 181 TLRMHELLKGNEAKGELDFTKWCWPNMKALGIEYCVFPYYYTIKDFSNAYLNENYKKTIL 240

Query: 241 EARENPTIIHYDAWWGAVKPWDYPFGLKADLWLNALAKTPFMSDWIDSIARVEIGSEKWH 300
           EARENPTIIHYDAWWGAVKPWDYPFGLKADLWLNALAKTPFMSD+   +   E       
Sbjct: 241 EARENPTIIHYDAWWGAVKPWDYPFGLKADLWLNALAKTPFMSDYTKKMHTNE------S 294

Query: 301 RYHSIVAYHYYFPLWKTEEQIAHDALKTFLDHYFSCIHAAIKQENLGMFLNHYFSHAHA- 359
            Y + +A  +YF   K+ ++I   A   F   Y   +    K+  +         H+   
Sbjct: 295 FYTTKMAEQHYFSSVKSSKEIVFKAPYLFFKSY---LFVVFKERKI---------HSRVF 342

Query: 360 EIKENSLEMFLNHYFSHVYRLPKKARKRLFRVFVKHCILIPLKSLVGKTLRLLKLHALAK 419
           E+  N ++ F N     V+ +PK   KR                 V K LR+L LH + K
Sbjct: 343 ELTCNLVKKFFNKLIYFVFLMPKALVKR----------------AVSKILRVLGLHGIVK 386

Query: 420 KILIQLKLLKK 430
           KILI+LKLLKK
Sbjct: 387 KILIKLKLLKK 397