>ref|NP_224002.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
           pylori J99]
          Length = 649

 Score =  833 bits (2153), Expect = 0.0
 Identities = 454/696 (65%), Positives = 517/696 (74%), Gaps = 65/696 (9%)

Query: 132 VKSETIYKDFCFELEDILFNFDASLLESKKYNEKVDLVFNLK----DTDKKTNTLNFSVT 187
           +KSETIYKDFCFELE ILFNFD SLLESKKYNEKVDL+F+LK    D D KTNTLNFSVT
Sbjct: 1   MKSETIYKDFCFELEGILFNFDTSLLESKKYNEKVDLIFDLKSIVKDKDTKTNTLNFSVT 60

Query: 188 LSSKGNQTKISEILKECFNQSVKLDEEILKKAFGKFKKQGSMDYFIHKNALGFLKEQLDL 247
           LSSKG QTK +EILKEC NQ VKLDEEILKKAF KFKKQGSMDYFIHKNA GFLKEQLDL
Sbjct: 61  LSSKGTQTKTNEILKECSNQGVKLDEEILKKAFVKFKKQGSMDYFIHKNAQGFLKEQLDL 120

Query: 248 YLFEYLFKEMTAFDAKRLNEINTIKEVALEVVSLVSEFENELCKIWNKPRFVLNSHFIVS 307
           YLFEYLFKEMTAFD KRLN INTIKEVALEV++LVSEFENELCKIWNKPR VLNSHFIVS
Sbjct: 121 YLFEYLFKEMTAFDHKRLNGINTIKEVALEVIALVSEFENELCKIWNKPRLVLNSHFIVS 180

Query: 308 LDQLKAKNYDLNKITNHPNYPKQVKEWQDLNLKITDNFLENEFLPLDTIYFKDLEEEVTN 367
           LD+LKAKNYDL+KITNHPNYPKQVKEWQDLNL+I DN L NEFLPLDT+YFKDLEEEV +
Sbjct: 181 LDKLKAKNYDLSKITNHPNYPKQVKEWQDLNLEIADNLLGNEFLPLDTLYFKDLEEEVKS 240

Query: 368 LFNEDEINGTLIKSENYQALNSLKNRYKEAIDCIYIDPPYNTQNNEFIYADNFKRSSWLS 427
           LFNE+EINGTLIKSENYQALNSLKNRYKEAIDCIYIDPP+NT  ++F Y D F+ S+WLS
Sbjct: 241 LFNENEINGTLIKSENYQALNSLKNRYKEAIDCIYIDPPFNT-GSDFAYIDRFQDSTWLS 299

Query: 428 MMENRLELARKLLNDKGAMFVSIDDNEQAYLKVLMDEVFNGGGGDNFVASISWKQFHSVK 487
           +M NRL+LA   L+ +G  ++ +D       ++L++++F+    +NF   I W  F + +
Sbjct: 300 LMHNRLQLAYDFLSPQGNFYLHLDYRANYLGRMLLNDIFS---KENFRNEIIW-HFRTYQ 355

Query: 488 ND-AANFSKNIEYILCYCKNFSKNLISNEPFDKSNLYKLKDENGFYKLDPVWAKSGNNFS 546
               +NF +  + +L Y KN + N          N +K+   + +   D V  +    F 
Sbjct: 356 GQIQSNFPRKHDSLLWYSKNCNVN----------NFFKITYSDNY--KDTVDYRRWREF- 402

Query: 547 PYTFLNGKTWSPPSGTFWRYSIGTLKDMEQNNRIVF-------NGKNPMAKRYLSEVAEG 599
                                      +  NN+IV+       +  +   KRYL    E 
Sbjct: 403 ---------------------------IVDNNKIVYPNYPKADSRFDGYLKRYLQSTKEP 435

Query: 600 RKSSTFWDGSEVGYNLNGDAEIKQLFNGNKVFN------NPKPEALLQRILEISTKENDL 653
           +        +  GY ++      Q  +  K           KPE LL+RI++ S+ EN +
Sbjct: 436 KNGDII--ATINGYVIDDVWTDIQAIDPKKADERLQGTLTQKPEKLLERIIKASSNENSI 493

Query: 654 VLDFFAGSGTTCAVAHKMKRKYIGIEMGEHFESVILPRLKKVIGGFKSGAAKEFDGGGVI 713
           V DFFAGSGTTCAVAHK+KRKYIG+EMGEHFESVILPRLKKVIGGFKSGA KEF+GGGVI
Sbjct: 494 VCDFFAGSGTTCAVAHKLKRKYIGVEMGEHFESVILPRLKKVIGGFKSGALKEFNGGGVI 553

Query: 714 KVYELESYEEILRKIKYEDNDKPLAYDEQYSDLVERKNESYTLNIEALEKMGVDIKETLE 773
           KVYELESYEEILRKIKYEDNDKPLAY+EQYSDLVERKNESYTLNIEALE MGVDIKETLE
Sbjct: 554 KVYELESYEEILRKIKYEDNDKPLAYEEQYSDLVERKNESYTLNIEALENMGVDIKETLE 613

Query: 774 NLWGVGVEFFNEKVVKFKGNDKEVEILKALKEALIW 809
           NL GVGVEFFNEKVVKFKGNDKEV ILKALKEALIW
Sbjct: 614 NLHGVGVEFFNEKVVKFKGNDKEVSILKALKEALIW 649