>ref|NP_224003.1| putative [Helicobacter pylori J99]
          Length = 972

 Score = 1748 bits (4528), Expect = 0.0
 Identities = 868/965 (89%), Positives = 920/965 (94%), Gaps = 2/965 (0%)

Query: 1   MAKKKDLTTDNEIFVAQKLAEEELNTNEINEPLERLDFKSFDNNKELLDYQQQALINAFR 60
           MAKKK    +NEIFVAQKLAEEELN NEIN+PLE LDFKSFD+NKELLDYQQQALINAFR
Sbjct: 1   MAKKKQEVRNNEIFVAQKLAEEELNANEINDPLEMLDFKSFDDNKELLDYQQQALINAFR 60

Query: 61  MLVAYFRDFKENKKEFYAFYQKHYSFAHCDFAKKKLNPLLKSHFKVENHCVSFENFINRL 120
           +LVAYFRDFKE+KKEFYAFYQKHYSFA+CDFAKKKLN LLKSHFKVENHCV FENFINRL
Sbjct: 61  VLVAYFRDFKESKKEFYAFYQKHYSFANCDFAKKKLNHLLKSHFKVENHCVRFENFINRL 120

Query: 121 AFYMATGSGKTIVIIKLVELLSVAIRMGLIPKKNIMFFSANENLIQQFEKEIEKYNRNKD 180
           AFYMATGSGKTIVIIKLVELLSVA+ MGLIPKKNIMFFSANE+LI+QFEKEIEKYNRNKD
Sbjct: 121 AFYMATGSGKTIVIIKLVELLSVAMGMGLIPKKNIMFFSANEHLIKQFEKEIEKYNRNKD 180

Query: 181 YFKQIDFKSLKSVTHKDFYRAPKDSVIKQITLFYYRADLMNDEESKENLLNYKDYWDNGE 240
           Y KQIDFK+LKSV +KDFYRAPKDS++K+I LFYYRADLM+DEESKENLLNYKD WDNGE
Sbjct: 181 YSKQIDFKNLKSVKNKDFYRAPKDSLMKEIALFYYRADLMSDEESKENLLNYKDCWDNGE 240

Query: 241 NYVILDEAHKGNKSESKRQAIFSLLSLKGFLFNFSATFTEESDLITAVYNLSVGEWVKLG 300
           NYVILDEAHKGNK+ESKRQAIFSLLSLKGFLFNFSATFTEESDLITAVYNLSVGEWVKLG
Sbjct: 241 NYVILDEAHKGNKTESKRQAIFSLLSLKGFLFNFSATFTEESDLITAVYNLSVGEWVKLG 300

Query: 301 YGKESVLLKKNNLNAFKELKDLNDREKEIALLKALLLLGMQKRYKTEGYFYDPLMLVFTH 360
           YGKESVLLKKNNLNAFKELKDLNDREKEIALLKALLLLGMQKRYK EGYF+DPLMLVFTH
Sbjct: 301 YGKESVLLKKNNLNAFKELKDLNDREKEIALLKALLLLGMQKRYKVEGYFHDPLMLVFTH 360

Query: 361 SVNVKNSDAEIFFKTLARVIENDDGSDFLKAKEDLLEELKNPEFLFSD--DKDKDYKVKV 418
           SVN++NSDAEIFFKTLARVIENDD SDF KAK+DLLEELKNPEFLFSD  DK+KDYK++V
Sbjct: 361 SVNMENSDAEIFFKTLARVIENDDESDFSKAKDDLLEELKNPEFLFSDGKDKEKDYKIEV 420

Query: 419 FKEGLKSMDFKGLKEEVFYANNGHIEVIINPKNNQEIAFKLNTSDKVFCLIRIGDITEWI 478
           FKE LK MDFKGLKE VFYA+NGHIEVIINPKNNQEIAFKLNTSDKVFCLIRIGDITEWI
Sbjct: 421 FKESLKGMDFKGLKEAVFYASNGHIEVIINPKNNQEIAFKLNTSDKVFCLIRIGDITEWI 480

Query: 479 CEKLKSVKVVSKNLSFKEESYFSQIDKSSINILVGSRTFDTGWDSTRPSVILFLNIGLDD 538
            EKLKSVKVVSKNLSFKEESYFSQIDKSSINILVGSR FDTGWDSTRPSVILFLNIGLDD
Sbjct: 481 REKLKSVKVVSKNLSFKEESYFSQIDKSSINILVGSRAFDTGWDSTRPSVILFLNIGLDD 540

Query: 539 DAKKLVKQSFGRGVRIESVKNQRQRLAYLDIDGAIKKALKPNAAMLETLFVIPTNYASLE 598
           DAKKLVKQSFGRGVRIESVKNQRQRLAYL+ID AIK  LKPNAAMLE LFVIPTN+ASLE
Sbjct: 541 DAKKLVKQSFGRGVRIESVKNQRQRLAYLEIDEAIKDKLKPNAAMLEMLFVIPTNHASLE 600

Query: 599 AILKFQKESENKGENRGSWREIKLEKTPIKHALFVPCYRKEQTSILELPESASFKMSEKN 658
           AILKFQKESEN GENRG WREIKLEKT I+HALFVPCYRKEQT+ L++ +SASFKMSEKN
Sbjct: 601 AILKFQKESENGGENRGPWREIKLEKTRIEHALFVPCYRKEQTNALKISQSASFKMSEKN 660

Query: 659 FKDLKEYFNLMSEKHFILKHEIYDPKDYMQLKKMTQEAHFNKVSTWHYKDLDYMISEIKG 718
           FKDLKE+F+LMSEKHFILKHEIYDPKDY  LK+M Q AHF KVSTWHYKDLDYMISEIKG
Sbjct: 661 FKDLKEHFHLMSEKHFILKHEIYDPKDYALLKEMIQTAHFKKVSTWHYKDLDYMISEIKG 720

Query: 719 KLYPNQKVPKDEFNALDSEKIVHFKRIKVKADKKEELVKTIQEVKEYAPLDKETLIKKIA 778
           KLYPNQKVPKDEFNALD+EKIVHFKR+KVKADKKE+L++TIQEVKE+APLDKETL KKIA
Sbjct: 721 KLYPNQKVPKDEFNALDNEKIVHFKRVKVKADKKEKLIQTIQEVKEHAPLDKETLRKKIA 780

Query: 779 QGEIDPYDTEKHKQNKTFKVGGAELLKLKEHYYTPLIKAKNCDWLKHVVKVESESDFLEE 838
           QGEIDPYDTEKHKQ++TFKVG AELLKLKEHYYTPLIKAKNCDWLKHVVKV+SESDFLEE
Sbjct: 781 QGEIDPYDTEKHKQDRTFKVGDAELLKLKEHYYTPLIKAKNCDWLKHVVKVKSESDFLEE 840

Query: 839 LLKITETLQENYDFWAFSKIDEHLDNLFIPYFNNAAERKFFPDFIFWLEKGGTQIICFID 898
           LLKITETLQENYDFWAFSKIDEHLDNLFIPY +NA ER+FFPDFIFWL+KGGTQIICFID
Sbjct: 841 LLKITETLQENYDFWAFSKIDEHLDNLFIPYIDNATERRFFPDFIFWLQKGGTQIICFID 900

Query: 899 PKGSKHTDYEHKADAYQLFKDKIFNPKDNPNLKIKVVLKFYGDKDEVADGYRDYWIKKGK 958
           PKGSKHTDYEHKADAYQLF+DK+FNPKD+PNLKIKVVLKFYGDKD+V + YRD WI+KGK
Sbjct: 901 PKGSKHTDYEHKADAYQLFEDKVFNPKDDPNLKIKVVLKFYGDKDDVGERYRDLWIEKGK 960

Query: 959 LEDFF 963
           LE FF
Sbjct: 961 LEYFF 965