>ref|NP_224082.1| putative TYPE II RESTRICTION ENZYME [Helicobacter pylori J99]
          Length = 406

 Score =  517 bits (1332), Expect = e-148
 Identities = 284/391 (72%), Positives = 306/391 (77%), Gaps = 24/391 (6%)

Query: 15  IHDTQIENSYPYVVRAA-TNNGIKGFIIDDPTFANKKNTLSFAQDTF-TVFYQKQPY--F 70
           I    I +   +V+ A  +NNG+ G   D      + +T++   D F   FY+   Y   
Sbjct: 32  IQKRHINHKGEFVITAGLSNNGVLGQS-DIKAKVFESHTITI--DMFGCAFYRSFAYKMV 88

Query: 71  TGNKVKILKPKFAFKSPKILHSISAILQFIL----KPLTWGLGSTTESIAEFKFSLPLKP 126
           T  +V  LKPKF     +I H I   L  +     K   +    +   I   K  LPLKP
Sbjct: 89  THARVFSLKPKF-----EINHKIGLFLSTLFFGYHKKFGYENMCSWAKIKNDKVILPLKP 143

Query: 127 TANAQTLEDIDFDFMEKFIAELEQCRLAELEQCRLAELQAYLKATGLENTTLSNDEENAL 186
           TAN QTLE IDFDFMEKFIAELEQCRLAEL        QAYLKATGLENTTLSNDEENAL
Sbjct: 144 TANTQTLEGIDFDFMEKFIAELEQCRLAEL--------QAYLKATGLENTTLSNDEENAL 195

Query: 187 NVFNNSGGGGGNTPCGLTWQSFRLGDLFEIEKTLSFNKDALTQGEDYDYITRTSQNQGVL 246
           NVFNNSGGGGGNTPCGLTWQ F+LGDLFEIEKTLSFNKDALTQG+DYDYITRTSQNQGVL
Sbjct: 196 NVFNNSGGGGGNTPCGLTWQHFKLGDLFEIEKTLSFNKDALTQGQDYDYITRTSQNQGVL 255

Query: 247 QTTGFVNAENLNPPFTWSLGLLQMDFFYRKKSWYAGQFMRKITPKTEIENKIDLRIANYF 306
           QTTGFVNAENLNPPFTWSLGLLQMDFFYRKKSWYAGQFMRKITPKTEI+NKI+ RIA+YF
Sbjct: 256 QTTGFVNAENLNPPFTWSLGLLQMDFFYRKKSWYAGQFMRKITPKTEIKNKINSRIAHYF 315

Query: 307 TTLLNALKRPLLSVLVRDIDKTFREQKIQLPLKPTAKTQTLDGIDFDFMHTLINALMKQT 366
           TTLLNALKRPLLSVLVRDIDKTFREQKIQLPLKPTAKTQ+LDGIDFDFMHTLINALMKQT
Sbjct: 316 TTLLNALKRPLLSVLVRDIDKTFREQKIQLPLKPTAKTQSLDGIDFDFMHTLINALMKQT 375

Query: 367 IQGVAQYCDAKIQATKEVISQEAPVQKDSLF 397
           IQGV QYCDAKIQATKEVISQE P+QKDSLF
Sbjct: 376 IQGVVQYCDAKIQATKEVISQETPIQKDSLF 406