>ref|NP_222912.1| putative [Helicobacter pylori J99]
          Length = 916

 Score = 1004 bits (2597), Expect = 0.0
 Identities = 532/846 (62%), Positives = 621/846 (72%), Gaps = 98/846 (11%)

Query: 1   MSELVTEYANATNNLLFKELIKHVSGNSEGIKNFCQCVKEIKKCNTPNKKYNSDEFFIMG 60
           +SELVTEYAN TNNLLFK+LIKH+SGN++ +KNF QC++EI K N PNK+Y  ++FFI+G
Sbjct: 83  LSELVTEYANVTNNLLFKKLIKHLSGNNQLVKNFYQCIREIIKYNAPNKEYKPNQFFIIG 142

Query: 61  KHKQNQLAKIYSYFKKLSEGEIKPQN-EDILKKLKSLDEIFKTTDFTKFTPETEVKDIIK 119
           K KQ QLAKIYS+ K+LS  EIKPQ+ EDILKKL+ LD+IFKTTDFTKFTP+TE+KDIIK
Sbjct: 143 KGKQKQLAKIYSHLKELSASEIKPQDMEDILKKLEELDKIFKTTDFTKFTPKTEIKDIIK 202

Query: 120 EIDEKYPINENFKQQFRTFRLNIGNLKKKIKNSLKYLEKTRKNFERKKESLIREIEYYCK 179
           EIDEKYPINENFK+QF  F  NI           +  ++ +K+FER KESLIREIE +CK
Sbjct: 203 EIDEKYPINENFKRQFNEFESNI-----------EKHDEIKKDFERNKESLIREIENHCK 251

Query: 180 NQ----KTLEFDYDVLLDNIQQICKKYIASHVVNDASKDIKSMMCQFYLEKIDLLFNSEI 235
           N+    +  E+  + LL NIQQICK YI SH VND SKDIKSMMCQFYL++IDLL NSEI
Sbjct: 252 NECNSEEEPEYKINDLLKNIQQICKNYIESHAVNDVSKDIKSMMCQFYLKQIDLLVNSEI 311

Query: 236 EQYRYSDFLESARKFLWEDIKTLDEKSGVHLFPKNIGEIKDKFETNKEKFKQSKNYSEFA 295
            +YRYS+  E  ++ LWE IK LD +SG++LFPKNIGEIKDKFE NKEKFKQSKN SEFA
Sbjct: 312 VRYRYSNLFEPIQRSLWESIKILDNESGIYLFPKNIGEIKDKFEANKEKFKQSKNVSEFA 371

Query: 296 EYCRECNPYTAFQNLRNKVQFPLSGGLSYKSYKLVPTMKEYKEPKITDNDLKTALFTLFD 355
           EYCRECNPYTAF    N     ++ GLS++  K VP MKEYKEPKITDNDL+        
Sbjct: 372 EYCRECNPYTAFNFHLN-----INNGLSHQFEKFVPIMKEYKEPKITDNDLEAISTKETG 426

Query: 356 YSSPSEFDQWDWFFRNSLFRKMDFNPYNIWKNLNLDDK------KDFAEILEYNMQLKIN 409
            +S        WFF+ SLF K +FNP  IW  L  + +      KD     + +    I+
Sbjct: 427 LASQL---SGHWFFQLSLFNKTNFNPNKIWIPLEFNKRSKIKFDKDLEIYFDSHESFNIS 483

Query: 410 SLITKEFNKLLAIAEDSSQDSYQL-KIRVRHNN------KFYD------YSKKSTA---- 452
               +E ++        S+D + + KI  +H+N      +F++      ++K S A    
Sbjct: 484 KKYLQEIDQESLKKIKQSKDFFSIQKIESKHDNNDILQLEFFENDTSFLFAKGSFAEILE 543

Query: 453 -----------------------------YEIKLEI--------------------HDCR 463
                                        Y++K+ +                    +DCR
Sbjct: 544 YNMQLKIDSLITKEFNKLLAIVQDSPQDSYQLKIRVRHNNKLPREKYTEHEIKLEVYDCR 603

Query: 464 KSHDQNEPIILSQQSTGFQWAFNFMFGFLYNVGSDFSLNKNIIYVMDEPATHLSVPARKE 523
           KSHD NEPIILSQQSTGFQWAFNFMFGFLYNVGS FS N NIIYVMDEPATHLSVPARKE
Sbjct: 604 KSHDHNEPIILSQQSTGFQWAFNFMFGFLYNVGSHFSFNHNIIYVMDEPATHLSVPARKE 663

Query: 524 FRRFLKEYAHKNHVTFVLATHDPFLVDTDHLDEIRIVEKETEGSVIKNHFNYPLNNAGKD 583
           FR+FLKEYAHKNHVTFVLATHDPFLVDTDHLDEIRIVEKETEGSVIKNHFNYPLNNA KD
Sbjct: 664 FRKFLKEYAHKNHVTFVLATHDPFLVDTDHLDEIRIVEKETEGSVIKNHFNYPLNNASKD 723

Query: 584 SDALDKIKRSLGVGQHVFHNPKKHQIIFVEGITDYCYLSAFKLYFNEREFKENPIPFTFL 643
           SDALDKIKRSLGVGQHVFHNP+KH+IIFVEGITDYCYLSAFKLY   +E+K+NPIPFTFL
Sbjct: 724 SDALDKIKRSLGVGQHVFHNPQKHRIIFVEGITDYCYLSAFKLYLRYKEYKDNPIPFTFL 783

Query: 644 PISGLKNNPNEMKETIQKLCELDNHPIVLTDDDRKDGSDPQRAKSEQFKNANEEMHDPIR 703
           PISGLKN+ N+MKETI+KLCELDNHPIVLTDDDRK   + Q+A SE+FK ANEEMHDPI 
Sbjct: 784 PISGLKNDSNDMKETIEKLCELDNHPIVLTDDDRKCVFN-QQATSERFKRANEEMHDPIT 842

Query: 704 ILQLSDCDRHFKQIEDCFSANDRKKYAKNKQMELAMAFKTRLLYGEKDDVMSEETKKNFL 763
           ILQLSDCDRHFKQIEDCFSANDR KYAKNKQMEL+MAFKTRLLYG  +D + ++TK+NFL
Sbjct: 843 ILQLSDCDRHFKQIEDCFSANDRNKYAKNKQMELSMAFKTRLLYG-GEDAIEKQTKRNFL 901

Query: 764 KLFEWI 769
           KLF+WI
Sbjct: 902 KLFKWI 907