>ref|NP_222748.1| putative [Helicobacter pylori J99]
          Length = 565

 Score =  575 bits (1481), Expect = e-165
 Identities = 326/595 (54%), Positives = 413/595 (68%), Gaps = 41/595 (6%)

Query: 1   MLLNYDFLEFVD-EPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGD 59
           MLLNYDFLE VD EP+RNTSLT++IDKALAD+KLARQNKP VRV    + LS+ LDA G 
Sbjct: 1   MLLNYDFLELVDDEPQRNTSLTSAIDKALADKKLARQNKPRVRVKDN-LSLSETLDAYGR 59

Query: 60  EISRLKYDMSHKTIKGSTIESSNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQN 119
           E+SRLK     +TIK STIESSNL SI  KI SGLPFGTISAFRPFK+AF KDFT+ E+ 
Sbjct: 60  ELSRLKNQQ--ETIKASTIESSNLNSIVNKIKSGLPFGTISAFRPFKEAFIKDFTQDERE 117

Query: 120 ALIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFFHPQPENGKETTKFKNYKDR 179
            L+ AYKSG      D ++K W     D +P D   + D F             + Y+  
Sbjct: 118 LLVEAYKSGYKASQLDKVSKKWRD---DPNPIDASYLADAF------------LREYR-- 160

Query: 180 IENIYATLYNTLGRGYVDKFF--KKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIM 237
              I   L   LG+ +V+KF   K E TM+DFMSS+KFV++YR+T+K+N+ RTQ LK ++
Sbjct: 161 --TIALKLSTALGKPFVNKFLNPKSETTMKDFMSSEKFVKKYRFTQKDNIKRTQELKSLL 218

Query: 238 NIDRDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVA 297
           +  R F+GY++V GYWKD   D +LP KEVSFFVFQNEPS++F+LK+ LL   K F Q A
Sbjct: 219 DQKRHFLGYLQVTGYWKDKLNDPLLPSKEVSFFVFQNEPSNSFNLKDQLLDLAKYFNQEA 278

Query: 298 ICYGGQLIANKNKTYRIDLISCRPDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFL 357
           ICY         +T ++DL+     +FG+V   FTGI F++P  L Q++TR+++ VYTF 
Sbjct: 279 ICY-----CQNAETGKVDLVLATEKDFGKVDMTFTGITFTIP--LTQSITRLHNKVYTFF 331

Query: 358 SRNKEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDIRSNIKALQKMSRGYGHP 417
             +K+G     +  +++  T+LKA  +P    K+  E     + + +K+  +  + +G P
Sbjct: 332 --DKQGKDNYGVFFDELSTTKLKAMSIP----KIADEFY-RHLENRVKSFIRARQYHGSP 384

Query: 418 KEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAK 477
           + F  D + K +  AIKR++ ++CA S  FK     NIK+NNL  A+RQGK+VS+TLI K
Sbjct: 385 RTFDADDIEKYELQAIKRLDLQRCAKSKSFKASYNHNIKINNLANALRQGKEVSKTLITK 444

Query: 478 VLANTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSL 537
           VLANTIDTDAGYCFIS  DLATQLGNISPRLSKSIVTAIEQAEG+RL YALIDK++YNSL
Sbjct: 445 VLANTIDTDAGYCFIS--DLATQLGNISPRLSKSIVTAIEQAEGIRLLYALIDKVSYNSL 502

Query: 538 HNILSFIFDIDNPLSDQVFERLVIEVPREALKNVKLPQIKNVLTSQIFDGAYHFK 592
           HN L+FIFDIDNP+SDQ    LV+EVPREALKNVKLPQIKN LTSQIFDGAY F+
Sbjct: 503 HNTLNFIFDIDNPMSDQSLNELVVEVPREALKNVKLPQIKNELTSQIFDGAYQFR 557