>ref|NP_224176.1| TRANSCRIPTION-REPAIR COUPLING FACTOR [Helicobacter pylori J99]
          Length = 1001

 Score = 28.5 bits (62), Expect = 0.22
 Identities = 31/107 (28%), Positives = 51/107 (46%), Gaps = 14/107 (13%)

Query: 34  KDVAIKVVLRDGDF-IKDKESLKQYEKSV--LNLSFKPIESHFPMSIPLVTLKEKQGYVM 90
           K++ + VV  +  F +K KE+LK+  KSV  L++S  PI     M++  +   +    + 
Sbjct: 603 KNLGLMVVDEEHKFGVKQKEALKELSKSVHFLSMSATPIPRTLNMALSQI---KGISSLK 659

Query: 91  KMAEGYEPLKTFLK-------KPSILENEEKDG-IFRINNAIQELCK 129
                 +P +TFLK       K  I     ++G IF I+N I  + K
Sbjct: 660 TPPTDRKPSRTFLKEKNDELLKEIIYRELRRNGQIFYIHNHIASISK 706