>ref|NP_223153.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
           pylori J99]
          Length = 351

 Score = 82.4 bits (202), Expect = 4e-17
 Identities = 97/390 (24%), Positives = 158/390 (39%), Gaps = 62/390 (15%)

Query: 12  LFSGAGVGCYGLLEEG-FECVATNEILEKRLNIQRINRKCKLDESYISGDIKKPETKEKI 70
           +F GAG   YG      FE +  N+I +  +   + N K               ET+  +
Sbjct: 7   IFCGAGGLSYGFSTHPYFELIWANDIDKDAILSYQANHK---------------ETQTIL 51

Query: 71  LKQIEFYSKKFGNDRVDLVVATPPCQGMSVANHKKKNDEIKRNSLVVESIDLIKQIKPRF 130
               + +        +D+++  PPCQ  S    K+K DE  + +L  E + ++  +KP+ 
Sbjct: 52  CDIAQLHCHNLPRVPIDILLGGPPCQSYSTLG-KRKMDE--KANLFKEYLRILDLVKPKI 108

Query: 131 FILENVPSFYKTGCIDKNDNLLEIGSMIEQNLSGDYMLYDEVINFKNFGANSSRTRTLVI 190
           F+ ENV        + K      I +  ++     Y+L   ++N  ++G    R R +++
Sbjct: 109 FVFENVVGLMS---MQKGQLFQRICNAFKER---GYILEHAILNALDYGVPQVRERVILV 162

Query: 191 GVCKEFKDFISALEFFPD-FKQEKTLKEVIGSLKPLAWGEYDNTDFYHSFRTYPKHMQEW 249
           G  K FK       +FP   K   +LK+ +G L P+  GE  N D     +       E+
Sbjct: 163 GALKSFKQKF----YFPKPIKTHFSLKDALGDLPPIQSGE--NGDALGYLKNADNVFLEF 216

Query: 250 I---KDLKEGQSAFENTELNKKPHRIVG--SKIVLNVS---KNG--DKYKRQKYHSVAPC 299
           +   K+L E  S   N +L K    +    SK  L  S   K+G  + Y +  +   AP 
Sbjct: 217 VRNSKELSEHSSPKNNEKLIKIMQTLKDGQSKDDLPESLRPKSGYINTYAKMWWEKPAPT 276

Query: 300 IHTRNDQMASQNTIHPKDDRVFSIRELMLLMNIPSRFKWLDLELQELNALNQQEKEKISK 359
           I       +S   IHP+D R  SIRE   L + P  +K+        NA           
Sbjct: 277 ITRNFSTPSSSRCIHPRDSRALSIREGARLQSFPDNYKFYG----SANAK---------- 322

Query: 360 QNEMNIRQSIGEAVPTIIFKQIAIKIKNFM 389
                 R  IG AVP ++   +A  + +F+
Sbjct: 323 ------RLQIGNAVPPLLSAALAHAVFDFL 346