>ref|NP_223331.1| putative [Helicobacter pylori J99]
          Length = 1167

 Score = 1495 bits (3870), Expect = 0.0
 Identities = 759/916 (82%), Positives = 815/916 (88%), Gaps = 12/916 (1%)

Query: 29   EKTLFDAILLQDLADAMYNVMPTKLGDRNYWENFTKKTGNIARTLNNRLKIIFDKNPEFF 88
            +KTLFDAILLQDLA+A+YNVMPTKLGDRNYWENF KKTGNIARTLN RLK +F KNPE F
Sbjct: 253  QKTLFDAILLQDLANAVYNVMPTKLGDRNYWENFAKKTGNIARTLNERLKELFGKNPEIF 312

Query: 89   HGFLDSLRENIHQNIKEDEALDMITSHIITKPIFDALFGDNIKNPIAKALDKMVEKLSTL 148
              FL SLR NIHQ+IKE+EALDMI SHIITKPIFDA+FGDNIKNPIAKALDKMV KLS L
Sbjct: 313  DNFLTSLRGNIHQSIKEEEALDMIISHIITKPIFDAIFGDNIKNPIAKALDKMVLKLSDL 372

Query: 149  GLEGETKDLKNLYESVKTEALHAKSQKSQQELIKNLYNTFFKEAFKKQSEKLGIVYTPIE 208
            GLEGETKDLKNLYESVKTEA  AKSQKSQQELIKNLYNTFFKEAF+KQSEKLGIVYTPIE
Sbjct: 373  GLEGETKDLKNLYESVKTEAARAKSQKSQQELIKNLYNTFFKEAFRKQSEKLGIVYTPIE 432

Query: 209  VVDFILRATNGILKKHFNTDFNDQSITIFDPFTGTGSFIARLLSKENALISDEALKEKFQ 268
            VVDFILRATNGILKKHFNTDFNDQSITIFDPF GTGSFIARLLSKEN  ISDEALKEKFQ
Sbjct: 433  VVDFILRATNGILKKHFNTDFNDQSITIFDPFMGTGSFIARLLSKENDFISDEALKEKFQ 492

Query: 269  KNLFAFDIVLLSYYIALINITQAAQNRDGSLNNFKNIALTDSLDYLEEKTNKGVLP---- 324
            K LFAFDIVLLSYYIALINITQAAQNRD SL NFKNIALTDSLDYLEEK +KGV+P    
Sbjct: 493  KGLFAFDIVLLSYYIALINITQAAQNRDSSLKNFKNIALTDSLDYLEEKNDKGVIPGFEY 552

Query: 325  LYEDLKENKGIKDTLANQNIRVIIGNPPYSAGAKSQNDNNQNLSHPKLEKLVYEKYGKNS 384
            L+EDLKENK IK T+  QNIRVIIGNPPYS+GAKS+NDNNQNLSHPKLEK VYE YGKNS
Sbjct: 553  LFEDLKENKEIKTTMEKQNIRVIIGNPPYSSGAKSENDNNQNLSHPKLEKRVYETYGKNS 612

Query: 385  TSRSVGKTTRDTLIQSIRMASDVVKDRGVIGFVVNGGFIDSKSADGFRKCVAKEFSHLYV 444
            T+++   +TRDTLI SIRMASD++KD+GV+GFVVNG FIDSKSADGFRKCVA++FSHLY 
Sbjct: 613  TAQN-KNSTRDTLIHSIRMASDLLKDKGVLGFVVNGSFIDSKSADGFRKCVAQDFSHLYA 671

Query: 445  LNLRGNQRTSGEVSKKEGGKIFDSGSRATVAIIFFVKDKSTPDNTIFYYEVEDYLKREAK 504
            LNLRGN RTSGE  KK+G  IFDSGSR TVAIIFFVKDK  P++TIFYYEVEDYLKREAK
Sbjct: 672  LNLRGNARTSGEERKKQGDGIFDSGSRVTVAIIFFVKDKDAPNHTIFYYEVEDYLKREAK 731

Query: 505  LNWLANFENLDFVPFEKITPNDKGDWINQRNDAFEKLIPLKRDKTLQ-NDSVFDINSLGV 563
            LN LANFENLD VPF++ITPNDKGDWINQRND FEKLIPLKRDK  +  +++FD+NS GV
Sbjct: 732  LNLLANFENLDSVPFKEITPNDKGDWINQRNDDFEKLIPLKRDKKSKIFNAIFDLNSNGV 791

Query: 564  VSGRDPWVYNFSPNILTQSVQKCIDTYNADLKRFNARFREAFKQRAQS----VKAGDLYK 619
             + RDPWVYNFS   L QSVQ CIDTYNADLKRFN RFREAFKQR        K+ D YK
Sbjct: 792  KTSRDPWVYNFSQKTLMQSVQNCIDTYNADLKRFNERFREAFKQRTAKDKGIKKSADRYK 851

Query: 620  QLNDKEITTDKTKIAWTDGLKNKLIKNKSARESSEERVRLALYRPFNKQWLYWDKDWINR 679
             LND+EITTDKTKIAWTDGLKNKLIKN++  ES  ERVRLALYRPFNKQWLYWDK+ INR
Sbjct: 852  HLNDREITTDKTKIAWTDGLKNKLIKNENLPESGMERVRLALYRPFNKQWLYWDKNLINR 911

Query: 680  QREFSKIFPDKDAQNVVINTGVGNGKDFSALVSDFISDYSLISPNQAYPLYYYDDLGNRH 739
            Q +  KIFPDK A+NVVINTGVGNGKDFSALVSDFISD+SLISPNQAYPLYYYDDLGNR+
Sbjct: 912  QSQLPKIFPDKSARNVVINTGVGNGKDFSALVSDFISDFSLISPNQAYPLYYYDDLGNRY 971

Query: 740  YAISGYCLNLFRRHYGDNLIAEEEIFYYIYAIFHHKGYLEKYKNSLAKEAPRIALSEDFK 799
             AISGY LNLFRRHY DN I EEEIFYYIYAIFHHKGYLEKYKNSLAKEAPRIALSEDFK
Sbjct: 972  NAISGYALNLFRRHYKDNAITEEEIFYYIYAIFHHKGYLEKYKNSLAKEAPRIALSEDFK 1031

Query: 800  ELSVLGKELAELHLNYESGEMHDNIKYTTLMNAEIEGYYDVDKM--TKKGDCIIYNQNIA 857
            ELS+LGKELAELHLNYESGEMH ++K+  L +AE+EGYYDV +M   KKGD I YN +I 
Sbjct: 1032 ELSMLGKELAELHLNYESGEMHTSVKHNLLESAEMEGYYDVIQMKKDKKGDRIKYNHHIT 1091

Query: 858  ITKIPKKAFDYVINGKSAIDWVIERYQKTMDKESLIENNPNDYAGGKYVFELLCRVITLS 917
            IT+IPKKAFDYV+NGKSAIDWVIERYQ T DK+SLIENNPN YAGGKY+FELLCRVITLS
Sbjct: 1092 ITQIPKKAFDYVVNGKSAIDWVIERYQITKDKDSLIENNPNHYAGGKYIFELLCRVITLS 1151

Query: 918  VKSVDLIEKISEKRFE 933
            VKSVDLIEKISEKRFE
Sbjct: 1152 VKSVDLIEKISEKRFE 1167