>ref|NP_223377.1| putative Outer membrane protein [Helicobacter pylori J99]
          Length = 638

 Score = 1043 bits (2697), Expect = 0.0
 Identities = 521/608 (85%), Positives = 557/608 (90%), Gaps = 8/608 (1%)

Query: 1   MVKNTGELKNLNEKYEQLSQSLAQLASLKKSIQTANNIQAVNNALSDLKSFASNNHTNKE 60
           MVKNTGELKNLN+KYEQLSQSLAQLASLKKSIQTANNIQAVNNALSDLKSFASNNHTNKE
Sbjct: 39  MVKNTGELKNLNDKYEQLSQSLAQLASLKKSIQTANNIQAVNNALSDLKSFASNNHTNKE 98

Query: 61  TSPIYNTAQAVITSVLAFWSLYAGNATSFHVTGLNDGSNAPLGRIHQDGNCTGLQQCFMN 120
           TSPIYNTAQAVITSVLAFWSLYAGNA SFHVTGLNDGSN+PLGRIH+DGNCTGLQQCFM+
Sbjct: 99  TSPIYNTAQAVITSVLAFWSLYAGNALSFHVTGLNDGSNSPLGRIHRDGNCTGLQQCFMS 158

Query: 121 KETYDKMKALAENLQKAQGNLCALSECPSDQLNGNNGNKTSMTKALETAQQLMDLIANTK 180
           KETYDKMK LAENLQKAQGNLCALSEC S+Q   +NG KTSMT AL+TAQQLMDLI  TK
Sbjct: 159 KETYDKMKTLAENLQKAQGNLCALSECSSNQ---SNGGKTSMTTALQTAQQLMDLIEQTK 215

Query: 181 TAMMWKNIVIAGVTNRPGGAGAITSTGPVTDYAVFNNIKAMIPILQQAVTLSQSNHTLSA 240
            +M+WKNIVIAGVTN+P GAGAITSTG VTDYAVFNNIKAM+PILQQA+TLSQSNHTLS 
Sbjct: 216 VSMVWKNIVIAGVTNKPNGAGAITSTGHVTDYAVFNNIKAMLPILQQALTLSQSNHTLST 275

Query: 241 SLQAQATGSQTNPKFAKDIYTFAQNQKQVISYAQDIFNLFNSIPAEQYKYLEKAYLKIPN 300
            LQA+A GSQTN +FAKDIY  AQNQKQ++S A  IFNLFNSIP +Q KYLE AYLK+P+
Sbjct: 276 QLQARAMGSQTNREFAKDIYALAQNQKQILSNASSIFNLFNSIPKDQLKYLENAYLKVPH 335

Query: 301 AGSTPTNPYRQVVNLNQEVQTIKNNVSYYGNRVDAALSVARDVYNLKSNQAEIVTAYNDA 360
            G TPTNPYRQ VNLN+E+  +++NV+ YGNR+D+ALSVA+DVYNLKSNQ EIVT YNDA
Sbjct: 336 LGKTPTNPYRQNVNLNKEINAVQDNVANYGNRLDSALSVAKDVYNLKSNQTEIVTTYNDA 395

Query: 361 KTLSEEISKLPHNQVNTKDIVTLPYDKNAPAAGQSNYQINPEQQSNLNQALAAMSNNPFK 420
           K LSEEISKLP+NQVN  +IV  P D  A       YQINPEQQSNLNQALAAMSNNPFK
Sbjct: 396 KNLSEEISKLPYNQVNVTNIVMSPKDSTA-----GQYQINPEQQSNLNQALAAMSNNPFK 450

Query: 421 KVGMISSQNNNGALNGLGVQVGYKQFFGESKRWGLRYYGFFDYNHGYIKSSFFNSSSDIW 480
           KVGMISSQNNNGALNGLGVQVGYKQFFGESKRWGLRYYGFFDYNHGYIKSSFFNSSSDIW
Sbjct: 451 KVGMISSQNNNGALNGLGVQVGYKQFFGESKRWGLRYYGFFDYNHGYIKSSFFNSSSDIW 510

Query: 481 TYGGGSDLLVNIINDSITRKNNKLSVGLFGGIQLAGTTWLNSQYVNLTAFNNPYSAKVNA 540
           TYGGGSDLLVN INDSITRKNNKLSVGLFGGIQLAGTTWLNSQY+NLTAFNNPYSAKVNA
Sbjct: 511 TYGGGSDLLVNFINDSITRKNNKLSVGLFGGIQLAGTTWLNSQYMNLTAFNNPYSAKVNA 570

Query: 541 TNFQFLFNLGLRTNLATARKKDSEHSAQHGIELGIKIPTITTNYYSFLGTQLQYRRLYSV 600
           +NFQFLFNLGLRTNLATA+KKDSE SAQHG+ELGIKIPTI TNYYSFLGT+L+YRRLYSV
Sbjct: 571 SNFQFLFNLGLRTNLATAKKKDSERSAQHGVELGIKIPTINTNYYSFLGTKLEYRRLYSV 630

Query: 601 YLNYVFAY 608
           YLNYVFAY
Sbjct: 631 YLNYVFAY 638