>ref|NP_223575.1| putative Outer membrane protein [Helicobacter pylori J99]
          Length = 366

 Score =  666 bits (1718), Expect = 0.0
 Identities = 329/369 (89%), Positives = 346/369 (93%), Gaps = 3/369 (0%)

Query: 1   MQFQKALLHSSFFLPLFLSFCIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQIISNA 60
           MQFQK LL  S    LFLS+CIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQ ISNA
Sbjct: 1   MQFQKTLLSLSL---LFLSYCIAEENGAYASVGFEYSISHAVEHNNPFLNQERIQTISNA 57

Query: 61  QNKIYKLHQVKNEITSMPKTFAYINNALKNNSKLTPTEMQAEQYYLQSTFQNIEKIVMLS 120
           QNKIYKL+QVKNEIT+MP TF YINNALKNN+KLTPTE QAE YYLQST QNIEKIVMLS
Sbjct: 58  QNKIYKLNQVKNEITNMPNTFNYINNALKNNAKLTPTEKQAETYYLQSTLQNIEKIVMLS 117

Query: 121 GGVSSNPQLVQALEKMQEPITNPLEFEENLRNLEVQFAQSQNRMLSSLSSQIAAISNSLN 180
           GGV+SNP+LVQALEKMQEPITNPLE  ENL+NLE+QF+QSQN MLSSLSSQIA ISNSLN
Sbjct: 118 GGVASNPKLVQALEKMQEPITNPLELVENLKNLELQFSQSQNSMLSSLSSQIAQISNSLN 177

Query: 181 ALDPNSYSKNISSMYGVSLSVGYKHFFTKKKNQGLRYYLFYDYGYTNFGFVGNGFDGLGK 240
           ALDP+SYSKN+SSMYGV LSVGYKHFFTKKKNQG RYYLFYDYGYTNFGFVGNGFDGLGK
Sbjct: 178 ALDPSSYSKNVSSMYGVGLSVGYKHFFTKKKNQGFRYYLFYDYGYTNFGFVGNGFDGLGK 237

Query: 241 MNNHLYGLGIDYLYNFIDNAKKHSSVGFYLGFALAGSSWVGSGLSMWVSQTDFINNYLTG 300
           MNNHLYGLGIDYL+NFIDNA+KHSSVGFY+GFALAGSSWVGSGL MWVSQ DFINNYLT 
Sbjct: 238 MNNHLYGLGIDYLFNFIDNAQKHSSVGFYVGFALAGSSWVGSGLGMWVSQMDFINNYLTD 297

Query: 301 YQAKMHTSFFQIPLNFGVRVNVNRHNGFEMGLKIPLAMNSFYETHGKGLNTSLFFKRLVM 360
           Y+AKMHTSFFQIPLNFGVRVNV+RHNGFEMGLKIPLA+NSFYETHGKGLN SLFFKRLVM
Sbjct: 298 YRAKMHTSFFQIPLNFGVRVNVDRHNGFEMGLKIPLAVNSFYETHGKGLNASLFFKRLVM 357

Query: 361 FNVSYVYSF 369
           FNVSYVYSF
Sbjct: 358 FNVSYVYSF 366