BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644663|ref|NP_206832.1| hypothetical protein
[Helicobacter pylori 26695]
(593 letters)
Database: NC_000921.faa
1491 sequences; 494,079 total letters
Searching...done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_222748.1| putative [Helicobacter pylori J99] 575 e-165
ref|NP_223632.1| putative [Helicobacter pylori J99] 306 1e-84
ref|NP_224022.1| putative [Helicobacter pylori J99] 188 3e-49
ref|NP_224023.1| putative [Helicobacter pylori J99] 108 5e-25
ref|NP_223334.1| putative [Helicobacter pylori J99] 64 1e-11
ref|NP_223242.1| METHYLENETETRAHYDROFOLATE DEHYDROGENASE/ME... 28 0.65
ref|NP_222990.1| putative [Helicobacter pylori J99] 27 1.9
ref|NP_222886.1| putative [Helicobacter pylori J99] 26 2.5
ref|NP_223617.1| putative [Helicobacter pylori J99] 26 3.2
ref|NP_224091.1| SERYL-TRNA SYNTHETASE [Helicobacter pylori... 25 4.2
ref|NP_223823.1| putative nucleoside transporter [Helicobac... 25 4.2
ref|NP_223054.1| septum formation protein [Helicobacter pyl... 25 4.2
ref|NP_224179.1| Ubiquinol cytochrome c oxidoreductase, cyt... 25 7.2
ref|NP_223501.1| HYDROXYETHYLTHIAZOLE KINASE [Helicobacter ... 24 9.4
ref|NP_222978.1| putative [Helicobacter pylori J99] 24 9.4
ref|NP_222939.1| putative [Helicobacter pylori J99] 24 9.4
>ref|NP_222748.1| putative [Helicobacter pylori J99]
Length = 565
Score = 575 bits (1481), Expect = e-165
Identities = 326/595 (54%), Positives = 413/595 (68%), Gaps = 41/595 (6%)
Query: 1 MLLNYDFLEFVD-EPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGD 59
MLLNYDFLE VD EP+RNTSLT++IDKALAD+KLARQNKP VRV + LS+ LDA G
Sbjct: 1 MLLNYDFLELVDDEPQRNTSLTSAIDKALADKKLARQNKPRVRVKDN-LSLSETLDAYGR 59
Query: 60 EISRLKYDMSHKTIKGSTIESSNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQN 119
E+SRLK +TIK STIESSNL SI KI SGLPFGTISAFRPFK+AF KDFT+ E+
Sbjct: 60 ELSRLKNQQ--ETIKASTIESSNLNSIVNKIKSGLPFGTISAFRPFKEAFIKDFTQDERE 117
Query: 120 ALIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFFHPQPENGKETTKFKNYKDR 179
L+ AYKSG D ++K W D +P D + D F + Y+
Sbjct: 118 LLVEAYKSGYKASQLDKVSKKWRD---DPNPIDASYLADAF------------LREYR-- 160
Query: 180 IENIYATLYNTLGRGYVDKFF--KKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIM 237
I L LG+ +V+KF K E TM+DFMSS+KFV++YR+T+K+N+ RTQ LK ++
Sbjct: 161 --TIALKLSTALGKPFVNKFLNPKSETTMKDFMSSEKFVKKYRFTQKDNIKRTQELKSLL 218
Query: 238 NIDRDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVA 297
+ R F+GY++V GYWKD D +LP KEVSFFVFQNEPS++F+LK+ LL K F Q A
Sbjct: 219 DQKRHFLGYLQVTGYWKDKLNDPLLPSKEVSFFVFQNEPSNSFNLKDQLLDLAKYFNQEA 278
Query: 298 ICYGGQLIANKNKTYRIDLISCRPDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFL 357
ICY +T ++DL+ +FG+V FTGI F++P L Q++TR+++ VYTF
Sbjct: 279 ICY-----CQNAETGKVDLVLATEKDFGKVDMTFTGITFTIP--LTQSITRLHNKVYTFF 331
Query: 358 SRNKEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDIRSNIKALQKMSRGYGHP 417
+K+G + +++ T+LKA +P K+ E + + +K+ + + +G P
Sbjct: 332 --DKQGKDNYGVFFDELSTTKLKAMSIP----KIADEFY-RHLENRVKSFIRARQYHGSP 384
Query: 418 KEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAK 477
+ F D + K + AIKR++ ++CA S FK NIK+NNL A+RQGK+VS+TLI K
Sbjct: 385 RTFDADDIEKYELQAIKRLDLQRCAKSKSFKASYNHNIKINNLANALRQGKEVSKTLITK 444
Query: 478 VLANTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYALIDKITYNSL 537
VLANTIDTDAGYCFIS DLATQLGNISPRLSKSIVTAIEQAEG+RL YALIDK++YNSL
Sbjct: 445 VLANTIDTDAGYCFIS--DLATQLGNISPRLSKSIVTAIEQAEGIRLLYALIDKVSYNSL 502
Query: 538 HNILSFIFDIDNPLSDQVFERLVIEVPREALKNVKLPQIKNVLTSQIFDGAYHFK 592
HN L+FIFDIDNP+SDQ LV+EVPREALKNVKLPQIKN LTSQIFDGAY F+
Sbjct: 503 HNTLNFIFDIDNPMSDQSLNELVVEVPREALKNVKLPQIKNELTSQIFDGAYQFR 557
>ref|NP_223632.1| putative [Helicobacter pylori J99]
Length = 411
Score = 306 bits (784), Expect = 1e-84
Identities = 197/471 (41%), Positives = 256/471 (53%), Gaps = 64/471 (13%)
Query: 1 MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDAVGDE 60
MLLNYDFLE ++ K VR + + M KFL +
Sbjct: 1 MLLNYDFLERMEGSK-------------------------VRAIDEKM---KFLHC-SNS 31
Query: 61 ISRLKYDMSHKTIKGSTIESSNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEKEQNA 120
I RL IKGSTIES+NL + KI +GLPFGTISAFRPFK F DFTE+E+
Sbjct: 32 IDRLILSYKMNLIKGSTIESANLSRVVNKIKNGLPFGTISAFRPFKPEFITDFTEEEREK 91
Query: 121 LIYAYKSGADPKNADIIAKYWLSQSVDLDPYDPIKVVDFFHPQPENGKETTKFKNYKDRI 180
LI AY SG AD + K W S +D Y D F G T
Sbjct: 92 LIEAYMSGYKHSKADRVTKNWNGNSNFIDAYYD---ADAFL----RGNGT---------- 134
Query: 181 ENIYATLYNTLGRGYVDKFF--KKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMN 238
IYA L LG+ +V+KF K EA M+DFMSS +FV+RYRYT K+NM RT+ K +N
Sbjct: 135 --IYAKLCKGLGKLFVNKFLNPKSEAPMKDFMSSKEFVKRYRYTSKDNMERTRQPKSFLN 192
Query: 239 IDRDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQFRQVAI 298
RDF+GYIEV+GYW + KD +L DKE SFFVFQNEPS TF+LK LL+ + F Q AI
Sbjct: 193 FKRDFLGYIEVVGYW--SLKDGLLTDKETSFFVFQNEPSDTFNLKKTLLVLARAFSQAAI 250
Query: 299 CYGGQLIANKNKTYRIDLISCRPDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLS 358
CY AN+ +DLIS P ++GEVW F GI FS P LPQ LTR+ D VYTF
Sbjct: 251 CYCQNASANE-----VDLISTEPGSYGEVWDTFNGIAFSAPVQLPQFLTRLKDKVYTFFK 305
Query: 359 RN-KEGIGLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDIRSNIKALQKMSRGYGHP 417
+ G G + + + KT++KA +P D E+ I +IK Q M+R YG+P
Sbjct: 306 KQPNSGYGTD---FDGIAKTQIKAAILPIDRLSEPFESY---IVGSIKGRQSMARAYGYP 359
Query: 418 KEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGK 468
K F +D + ++ IK + + +S ++ K+N+++ + A+ QGK
Sbjct: 360 KVFTIDEISGWEKETIKSRDYERRNLSKTYRLSAKQNLEIIKISNALAQGK 410
>ref|NP_224022.1| putative [Helicobacter pylori J99]
Length = 309
Score = 188 bits (478), Expect = 3e-49
Identities = 121/312 (38%), Positives = 175/312 (55%), Gaps = 33/312 (10%)
Query: 1 MLLNYDFLEFVDE----PKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFLDA 56
MLL+YDFL +++ P R L +K ++A QN+ R K + SK
Sbjct: 1 MLLDYDFLLLLNDESGKPTRYYYLLQDFEKDFVASEVA-QNR--ARQFVKEIIGSKKASK 57
Query: 57 VGDEISRLKYDMSHKTIKGSTIESSNLISIYKKIASGLPFGTISAFRPFKDAFYKDFTEK 116
+ ++ + + I TI S +L +KI SGLPFG ISAF+PFKDAFY+DF
Sbjct: 58 TKNSAIKVSHTKA-SAIGSETIGSCDLKKACEKIKSGLPFGIISAFKPFKDAFYRDFNHN 116
Query: 117 EQNALIYAYKSGADPKNADIIAK------YWLSQSVDLDPYDPIKVVDFFHPQPENGKET 170
EQ LI A KSG +AD +A+ YW +SV +D PI + DFF
Sbjct: 117 EQKLLIGAAKSGCIQSSADKLAQLKTRLIYWQDKSVKVDWDKPILIKDFF---------- 166
Query: 171 TKFKNYKDRIENIYATLYNTLGRGYVDKFFKK--EATMRDFMSSDKFVERYRYTRKENMA 228
K NY +Y L LG+ ++D+F K +A+++DFMSS +FV +YRYT K+N
Sbjct: 167 -KGNNY------LYRRLCFLLGKHFMDRFLKNNAKASVKDFMSSKEFVNKYRYTPKQNTE 219
Query: 229 RTQALKDIMNIDRDFIGYIEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLI 288
R + L+ + RDFIG+++ L KD+P+D LP++E+SF VF NEP+ F+L+++LL+
Sbjct: 220 RAKKLQSYLESKRDFIGFVQTLNSLKDSPQDPFLPNEEISFLVFANEPTIIFNLRDYLLV 279
Query: 289 WGKQFRQVAICY 300
+ F Q AICY
Sbjct: 280 LAQIFNQQAICY 291
>ref|NP_224023.1| putative [Helicobacter pylori J99]
Length = 243
Score = 108 bits (269), Expect = 5e-25
Identities = 74/228 (32%), Positives = 110/228 (47%), Gaps = 51/228 (22%)
Query: 408 QKMSRGYGHPKEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQG 467
++ YG P+ F + + +++ I+ E +K + KQ K+N+++N + +++
Sbjct: 19 ERKKNRYGFPRIFDVADIEQEEREVIEWREKKKAS-----KQSYKQNLQINKIANDLKRD 73
Query: 468 KKVSRTLIAKVLANTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLNYA 527
K V + I V ID D FI P DL QL IS LSK IV I+Q E + LNYA
Sbjct: 74 KIVDKRTILSV----IDADIERGFIPPKDLLKQLEKISASLSKDIVITIKQVEKLELNYA 129
Query: 528 LIDKITYNSLHNILSFIF-------------------DIDNPLSDQVFE----------- 557
LID I +N+L + L F F DID P+S+Q
Sbjct: 130 LIDNIQHNTLDDTLDFTFIVGDSLSVQSLYVTFNLVIDIDRPMSEQFLNHIGKLGSFESR 189
Query: 558 ------------RLVIEVPREALKNVKLPQIKNVLTSQIFDGAYHFKS 593
+L+IE P+EALKN +L QI+ +LT IF+GAY ++
Sbjct: 190 EQALEWVRLSQTKLIIETPKEALKNAELSQIEEILTGCIFNGAYRLQN 237
>ref|NP_223334.1| putative [Helicobacter pylori J99]
Length = 263
Score = 63.9 bits (154), Expect = 1e-11
Identities = 66/295 (22%), Positives = 116/295 (38%), Gaps = 66/295 (22%)
Query: 187 LYNTLGRGYVDKFFKKEATMRDFMSSDKFVERYRYTRKENMARTQALKDIMNIDRDFIGY 246
L+N + G F+ + +S K V R Y E + +K + R+FIG+
Sbjct: 17 LFNKINNGSP---FRVITFIGPILSHFKNVMRSGYLSSEP-TKQDRIKSFLINKREFIGF 72
Query: 247 IEVLGYWKDNPKDNILPDKEVSFFVFQNEPSSTFDLKNHLLIWGKQF-RQVAICY-GGQL 304
+E+ ++ E FFV++NEPS+TF+LK++LL+ K AICY G +
Sbjct: 73 VEI-----------VIGPSESLFFVYENEPSATFNLKSYLLVLAKMHCNPTAICYCGNKQ 121
Query: 305 IANKNKTYRIDLISCRPDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRNKEGI 364
A T I +S + +FG+ ++ S + Q+L ++ ++
Sbjct: 122 DAQNTNTKEIKFLSAKSHDFGKEMDS-KSVELSNSNTFIQSLLKLGSFLH---------- 170
Query: 365 GLNKLALNKVVKTELKATCMPYDYSKLGIETIGEDIRSNIKALQKMSRGYGHPKEFFLDA 424
K +++ T P P +
Sbjct: 171 -------GKTIESLNNPTNYP-------------------------------PINLVVTP 192
Query: 425 MIKKQENAIKRIEARKCAVSDDFKQGMKRNIKVNNLVKAMRQGKKVSRTLIAKVL 479
+ + ++ E RK D ++Q +NIK+N + ++QG+ VS LIA L
Sbjct: 193 ALAPWKTTVEIEEHRKNITFDHYRQSSAQNIKINEIANDLKQGEVVSNKLIANTL 247
>ref|NP_223242.1| METHYLENETETRAHYDROFOLATE DEHYDROGENASE/METHENYLTETRAHYDROFOLATE
CYCLOHYDROLASE [Helicobacter pylori J99]
Length = 290
Score = 28.1 bits (61), Expect = 0.65
Identities = 20/56 (35%), Positives = 30/56 (52%), Gaps = 6/56 (10%)
Query: 111 KDFTEKEQNALIYAYKSGADPKNADIIAKYWLSQSVD----LDPYDPIKVVDFFHP 162
++ TE E +LI Y + D + I+ + L +S+D L+ DP K VD FHP
Sbjct: 75 ENITEAELLSLIKDYNT--DQNISGILVQLPLPRSIDTKMILEAIDPNKDVDGFHP 128
>ref|NP_222990.1| putative [Helicobacter pylori J99]
Length = 523
Score = 26.6 bits (57), Expect = 1.9
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 8/110 (7%)
Query: 1 MLLNYDFLEFVDEPKRNTSLTASIDKALADRKLARQNKPSVRVLGKAMPLSKFL---DAV 57
+LL + FL E K + AL D+KLA+ + ++ ++ ++V
Sbjct: 5 VLLFFCFLFLQAEDKSQELSSIQKQMALVDKKLAKDDNVWLKKFENYKIYNQIYTEKESV 64
Query: 58 GDEISRLKYDMSHKTIKGSTIESSNLISIYKKIASGLPFGTISAFRPFKD 107
E+ RLK S +K ST+E + K + S PFKD
Sbjct: 65 RQELRRLKNKKSKDLLKISTLEHT-----LKALESQQKMFESYGVNPFKD 109
>ref|NP_222886.1| putative [Helicobacter pylori J99]
Length = 406
Score = 26.2 bits (56), Expect = 2.5
Identities = 28/97 (28%), Positives = 44/97 (44%), Gaps = 10/97 (10%)
Query: 246 YIEVLGYWKDNPKDNILPDKEVSFFVFQNEPS-STFDLKNHLLIWGKQFRQVAICYGGQL 304
Y E Y+++N K I K + +N P TF+ KN + Q ++ I +L
Sbjct: 97 YSENKSYYENNAKGRINFSKTIK----KNRPIIQTFNNKNSFVYTRFQVKRKMI-NENEL 151
Query: 305 IANKNKTYRIDLISCRPDNFGEVWAKFTGIKFSVPSD 341
I NK + S FG V++ F KF++P+D
Sbjct: 152 ITAINKYCVHEAFS----KFGFVFSSFMPPKFNLPTD 184
>ref|NP_223617.1| putative [Helicobacter pylori J99]
Length = 500
Score = 25.8 bits (55), Expect = 3.2
Identities = 18/100 (18%), Positives = 41/100 (41%), Gaps = 1/100 (1%)
Query: 402 SNIKALQKMSRGYGHPKEFFLDAMIKKQENAIKRIEARKCAVSDDFKQGMKR-NIKVNNL 460
S++ ++S G + +F+ + ++ +E + F+ K + ++NN+
Sbjct: 296 SDMSLFDRVSHKEGLQEIYFVASQADSAVGSMSEVEKSNHHLPTAFENAQKSLSSQLNNI 355
Query: 461 VKAMRQGKKVSRTLIAKVLANTIDTDAGYCFISPTDLATQ 500
+ A+ + R + K N + +G CF D Q
Sbjct: 356 MGALIEKYPNQREVFEKAKQNGVILTSGVCFSMHKDFENQ 395
>ref|NP_224091.1| SERYL-TRNA SYNTHETASE [Helicobacter pylori J99]
Length = 415
Score = 25.4 bits (54), Expect = 4.2
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 28 LADRKLARQNKPSVRVLGKAMPLSKFLDAVGDEISRLKYDMSHKTIKGSTIESSNLISIY 87
+ DRKL Q+ V A+ L K A+ DE+ RL+ ++H K IE L +
Sbjct: 1 MIDRKLLLQDFDKV-----ALSLKKRNHAMDDELERLREAIAH--YKKQLIELEGLQAFQ 53
Query: 88 KKIA 91
K++
Sbjct: 54 NKVS 57
>ref|NP_223823.1| putative nucleoside transporter [Helicobacter pylori J99]
Length = 418
Score = 25.4 bits (54), Expect = 4.2
Identities = 12/31 (38%), Positives = 19/31 (60%), Gaps = 1/31 (3%)
Query: 242 DFIGYIEVLGYWKDNPKDNILPDKEVSFFVF 272
+F+GY+++L Y DNP IL +K + F
Sbjct: 329 EFVGYMQLLPYLGDNP-PLILSEKTKAIITF 358
>ref|NP_223054.1| septum formation protein [Helicobacter pylori J99]
Length = 844
Score = 25.4 bits (54), Expect = 4.2
Identities = 22/83 (26%), Positives = 36/83 (42%), Gaps = 11/83 (13%)
Query: 321 PDNFGEVWAKFTGIKFSVPSDLPQALTRINDSVYTFLSRNKEGIGLNKLALNKVVKTELK 380
PD V ++FS+ +D+P LT I ++ K+ IG AL V K +
Sbjct: 558 PDQLKLVMIDPKMVEFSIYADIPHLLTPI-------ITDPKKAIG----ALQSVAKEMER 606
Query: 381 ATCMPYDYSKLGIETIGEDIRSN 403
+ +Y I++ E +SN
Sbjct: 607 RYSLMSEYKVKTIDSYNEQAQSN 629
>ref|NP_224179.1| Ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit
[Helicobacter pylori J99]
Length = 285
Score = 24.6 bits (52), Expect = 7.2
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 481 NTIDTDAGYCFISPTDLATQLGNISPRLSKSIVTAIEQAEGVRLN 525
+++D F P DLA LG+ +P LS I E V +N
Sbjct: 172 HSLDYAKDKAFSDPKDLANYLGSHAPDLSMMIRAKGEHGLNVFIN 216
>ref|NP_223501.1| HYDROXYETHYLTHIAZOLE KINASE [Helicobacter pylori J99]
Length = 259
Score = 24.3 bits (51), Expect = 9.4
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Query: 46 KAMPLSKFLDAVGDEISRLKYDMSHK--------TIKGSTIESSNLISI 86
KA+ LD VG S L+YD S + T++G+ E +L+ I
Sbjct: 77 KALNKPIVLDPVGCSASALRYDTSLELLESKGISTLRGNAAELGSLVGI 125
>ref|NP_222978.1| putative [Helicobacter pylori J99]
Length = 177
Score = 24.3 bits (51), Expect = 9.4
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 263 PDKEVSFFVFQNEPSSTFD 281
P KE +F+FQN+ + FD
Sbjct: 125 PSKEAFYFLFQNKLNPMFD 143
>ref|NP_222939.1| putative [Helicobacter pylori J99]
Length = 390
Score = 24.3 bits (51), Expect = 9.4
Identities = 25/131 (19%), Positives = 55/131 (41%), Gaps = 5/131 (3%)
Query: 450 GMKRNIKVNNLVKAMRQGKKVSRTLIAKVLANTIDTDAGYCFISPTDLATQLGNISPRLS 509
G N + NNL +A+ + K TL + + + G+ + ++ GNI +
Sbjct: 138 GYDENKQFNNLYEALGENFKRMVTL-GEDTSRFEEMYEGWKIL----FSSVRGNIEEERT 192
Query: 510 KSIVTAIEQAEGVRLNYALIDKITYNSLHNILSFIFDIDNPLSDQVFERLVIEVPREALK 569
+ + Q+ G +++ ID++ +N + + + +E + I+ P AL
Sbjct: 193 MRFLQDVAQSVGFETDFSYIDEVEFNVEEGVFKNGLNHEFLFKLIPWENIAIDEPELALL 252
Query: 570 NVKLPQIKNVL 580
+ + KN +
Sbjct: 253 MQGMMENKNTI 263
Database: NC_000921.faa
Posted date: Dec 10, 2001 4:36 PM
Number of letters in database: 494,079
Number of sequences in database: 1491
Lambda K H
0.319 0.137 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 626,757
Number of Sequences: 1491
Number of extensions: 29823
Number of successful extensions: 116
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 88
Number of HSP's gapped (non-prelim): 19
length of query: 593
length of database: 494,079
effective HSP length: 83
effective length of query: 510
effective length of database: 370,326
effective search space: 188866260
effective search space used: 188866260
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)