BLASTP 2.2.1 [Apr-13-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15645011|ref|NP_207181.1| hypothetical protein
[Helicobacter pylori 26695]
         (174 letters)

Database: NC_000921.faa
           1491 sequences; 494,079 total letters

Searching...done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_223715.1|  putative [Helicobacter pylori J99]              324  9e-91
ref|NP_224000.1|  putative histidine kinase sensor protein [...    35  0.001
ref|NP_223991.1|  NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [H...    29  0.061
ref|NP_224084.1|  putative [Helicobacter pylori J99]               29  0.080
ref|NP_223887.1|  RIBONUCLEASE II FAMILY PROTEIN [Helicobact...    27  0.30
ref|NP_224142.1|  TYPE I RESTRICTION ENZYME (RESTRICTION SUB...    27  0.40
ref|NP_223158.1|  putative [Helicobacter pylori J99]               27  0.40
ref|NP_223463.1|  putative FLAGELLAR BIOSYNTHESIS PROTEIN [H...    26  0.52
ref|NP_224063.1|  putative thiophene/furan oxidation protein...    25  0.89
ref|NP_223261.1|  putative [Helicobacter pylori J99]               25  1.5
ref|NP_223123.1|  putative [Helicobacter pylori J99]               25  1.5
ref|NP_223197.1|  cag island protein [Helicobacter pylori J99]     24  2.0
ref|NP_223384.1|  putative [Helicobacter pylori J99]               24  2.6
ref|NP_223712.1|  putative [Helicobacter pylori J99]               23  3.4
ref|NP_223263.1|  8-amino-7-oxononanoate synthase [Helicobac...    23  3.4
ref|NP_223138.1|  putative [Helicobacter pylori J99]               23  3.4
ref|NP_223986.1|  putative [Helicobacter pylori J99]               23  4.4
ref|NP_223739.1|  putative Outer membrane protein [Helicobac...    23  4.4
ref|NP_223475.1|  putative osmoprotection binding protein [H...    23  4.4
ref|NP_223472.1|  putative osmoprotection binding protein [H...    23  4.4
ref|NP_224050.1|  putative [Helicobacter pylori J99]               23  5.7
ref|NP_223470.1|  FLAGELLAR MOTOR PROTEIN [Helicobacter pylo...    23  5.7
ref|NP_223442.1|  putative [Helicobacter pylori J99]               23  5.7
ref|NP_223089.1|  putative [Helicobacter pylori J99]               23  5.7
ref|NP_222875.1|  putative [Helicobacter pylori J99]               23  5.7
ref|NP_223854.1|  POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE ...    22  7.5
ref|NP_222895.1|  putative [Helicobacter pylori J99]               22  7.5
ref|NP_224161.1|  putative TRANSCRIPTIONAL REGULATOR [Helico...    22  9.8
ref|NP_224001.1|  putative TRANSCRIPTIONAL REGULATOR [Helico...    22  9.8
ref|NP_223849.1|  TYPE II DNA MODIFICATION ENZYME (METHYLTRA...    22  9.8
>ref|NP_223715.1| putative [Helicobacter pylori J99]
          Length = 174

 Score =  324 bits (830), Expect = 9e-91
 Identities = 166/173 (95%), Positives = 168/173 (96%)

Query: 1   MPHSFKKRFLIIYTLSTLLLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNN 60
           MPHS KKRFLI+YTLSTLLLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNN
Sbjct: 1   MPHSLKKRFLIVYTLSTLLLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNN 60

Query: 61  ASSLEPLKILEERFKNTPFVLLDADNKVKFSNIGAFVASFKNDALIKTPYFALKKQGFYL 120
           ASSLEPLKILEERFKNTPFVLLDADN+VKFSNIG FVASFKNDALIKTPYFALKKQGFYL
Sbjct: 61  ASSLEPLKILEERFKNTPFVLLDADNRVKFSNIGVFVASFKNDALIKTPYFALKKQGFYL 120

Query: 121 TDSAPTNRLGVSKIIIAEEEIQKNFIPLYKMIGYAFLGASLFVALIARWLYKI 173
           TDSAPTNRLGVSKIIIAEEEIQK FIPLYKMIGY FLGASLFVALIA WLYKI
Sbjct: 121 TDSAPTNRLGVSKIIIAEEEIQKIFIPLYKMIGYVFLGASLFVALIAMWLYKI 173
>ref|NP_224000.1| putative histidine kinase sensor protein [Helicobacter pylori J99]
          Length = 344

 Score = 34.7 bits (78), Expect = 0.001
 Identities = 35/133 (26%), Positives = 64/133 (47%), Gaps = 15/133 (11%)

Query: 48  ADAIAKSLLELN---NASSLEPLKILEERFKNTPFVLLDADNKVKFSNIGAFVASFKNDA 104
           A  IA  +++L+   +A     L  L  R+K+    L D+  +V +SNI       ++  
Sbjct: 2   ASKIASEIIQLHMQTHADYHNALNALISRYKDASIALFDSKKRVLYSNIP------ESAD 55

Query: 105 LIKT----PYFALKKQGFYLTDSAPTNRLGVSKIIIAEEEIQKNFIPLYKMIGYAFLGAS 160
           LIKT     +F+ K + +YL        LGV+K++    +   +F  LY+ +   F+ A 
Sbjct: 56  LIKTHKEGGFFSFKGE-YYLFSDETFAHLGVAKMLFKNSK-PLHFSSLYRNMVLVFVVAF 113

Query: 161 LFVALIARWLYKI 173
           L V  ++ +L ++
Sbjct: 114 LCVIGVSVFLGRL 126
>ref|NP_223991.1| NICOTINATE-NUCLEOTIDE PYROPHOSPHORYLASE [Helicobacter pylori J99]
          Length = 273

 Score = 29.3 bits (64), Expect = 0.061
 Identities = 22/82 (26%), Positives = 37/82 (44%), Gaps = 7/82 (8%)

Query: 25  LALFFFYAKNNLLENTQIRMQYTADAIAKSLLEL-------NNASSLEPLKILEERFKNT 77
           L  F  +A+ NL    +I ++  +   AK+ +         +N S  E  +I   R  + 
Sbjct: 168 LKSFLTHARKNLPFTAKIEIECESFEEAKNAMSAGADIVMCDNMSVGETKEIAAYREAHY 227

Query: 78  PFVLLDADNKVKFSNIGAFVAS 99
           PFVLL+A   +   +I A+  S
Sbjct: 228 PFVLLEASGNISLESINAYAKS 249
>ref|NP_224084.1| putative [Helicobacter pylori J99]
          Length = 191

 Score = 28.9 bits (63), Expect = 0.080
 Identities = 26/88 (29%), Positives = 47/88 (52%), Gaps = 5/88 (5%)

Query: 15  LSTLLLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNNASSLEPLKILEERF 74
           LS  L V   ++++ FYA + + E   I+ +Y     ++ L  L+  +  E +KIL+E+ 
Sbjct: 24  LSLKLRVLEGVSVYSFYAYSEIEE--LIKSKYALIG-SRILPLLSQKAGAEFVKILQEQG 80

Query: 75  KNTPFVLLDADNKVK--FSNIGAFVASF 100
            NTP   +  D+K+K  +S+  A +  F
Sbjct: 81  LNTPLYGIAIDDKIKSFYSHSAALLKGF 108
>ref|NP_223887.1| RIBONUCLEASE II FAMILY PROTEIN [Helicobacter pylori J99]
          Length = 644

 Score = 26.9 bits (58), Expect = 0.30
 Identities = 25/76 (32%), Positives = 31/76 (39%)

Query: 72  ERFKNTPFVLLDADNKVKFSNIGAFVASFKNDALIKTPYFALKKQGFYLTDSAPTNRLGV 131
           ER KN  F +  A N  K   I     SFK DALI       KK+      +A  N    
Sbjct: 51  ERVKNKAFFISLAKNYPKDPLIKNLPPSFKTDALILCQIECSKKRPIAFFKAALLNADHA 110

Query: 132 SKIIIAEEEIQKNFIP 147
               +A+E+ Q   IP
Sbjct: 111 MIAYLAKEKNQIVAIP 126
>ref|NP_224142.1| TYPE I RESTRICTION ENZYME (RESTRICTION SUBUNIT) [Helicobacter
           pylori J99]
          Length = 991

 Score = 26.6 bits (57), Expect = 0.40
 Identities = 10/21 (47%), Positives = 14/21 (66%)

Query: 138 EEEIQKNFIPLYKMIGYAFLG 158
           E E+Q   I  +K +GYA+LG
Sbjct: 4   EREVQNQVIETFKAMGYAYLG 24
>ref|NP_223158.1| putative [Helicobacter pylori J99]
          Length = 912

 Score = 26.6 bits (57), Expect = 0.40
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 4/47 (8%)

Query: 32  AKNNLLENTQIRMQYTADAIAKSLLELNNASSLEPL----KILEERF 74
           ++ +LL+NT++  + T +    SLLE  NA  L  L    K+ E+ F
Sbjct: 205 SQEDLLKNTELNNETTQEVKNLSLLEQANAEKLAKLESEAKVSEQEF 251
>ref|NP_223463.1| putative FLAGELLAR BIOSYNTHESIS PROTEIN [Helicobacter pylori J99]
          Length = 183

 Score = 26.2 bits (56), Expect = 0.52
 Identities = 28/104 (26%), Positives = 49/104 (46%), Gaps = 18/104 (17%)

Query: 19  LLVGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNNASSLEPLKILEERFKNTP 78
           L++G L A+   +A N + +N +   +Y   +I+   LEL+N   L  +K+ +   K+T 
Sbjct: 81  LVLGPLYAIDAPFAVNLVSQNGR---RYLKASIS---LELSNEKLLNEVKVKDTAIKDTI 134

Query: 79  FVLLDA-----------DNKVKFSNIGAFVASFKNDALIKTPYF 111
             +L +            NK+K   I + + SF  D  IK  +F
Sbjct: 135 IEILSSKSVEEVVTNKGKNKLK-DEIKSHLNSFLIDGFIKNVFF 177
 Score = 23.1 bits (48), Expect = 4.4
 Identities = 21/66 (31%), Positives = 34/66 (50%), Gaps = 7/66 (10%)

Query: 9  FLIIYT-LSTLLLVGVLLALFF---FYAKNNLLENTQIRMQYTADAIAKSLLELNNASSL 64
          F+II + L  LLLVGV++ L       +K N  +NTQ   +  A+ +A    E    S++
Sbjct: 21 FVIIGSVLVMLLLVGVIIMLLMGNKEESKENASKNTQ---EVQANPMANKNQEAKEGSNI 77

Query: 65 EPLKIL 70
          +   +L
Sbjct: 78 QQYLVL 83
>ref|NP_224063.1| putative thiophene/furan oxidation protein [Helicobacter pylori
           J99]
          Length = 461

 Score = 25.4 bits (54), Expect = 0.89
 Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 33  KNNLLENTQIRMQYTADAIAKSLLELNNASSLEPLKILEERFKNTPFVLLDADNKVKFSN 92
           KN+L    ++ +  +   I  S+LE N  +S   LK L ++     F  LD  NK+  ++
Sbjct: 341 KNDLAPKLELEILKSYLKIPYSILETNTLNSKACLKDLSQKISEF-FPKLDTQNKLLLTS 399

Query: 93  IGAFVA 98
           +    A
Sbjct: 400 LAQTTA 405
>ref|NP_223261.1| putative [Helicobacter pylori J99]
          Length = 192

 Score = 24.6 bits (52), Expect = 1.5
 Identities = 15/45 (33%), Positives = 23/45 (50%), Gaps = 3/45 (6%)

Query: 99  SFKNDALIKTPYFALKKQGFYLTDSAPTNRLGVSKIIIAEEEIQK 143
           S +N  L   PY+ L+ +  YLT    ++ +   K   A EEI+K
Sbjct: 31  SQRNSFLQDVPYWMLQNRSQYLTQGVDSSHIVDGK---ATEEIEK 72
>ref|NP_223123.1| putative [Helicobacter pylori J99]
          Length = 409

 Score = 24.6 bits (52), Expect = 1.5
 Identities = 17/50 (34%), Positives = 24/50 (48%)

Query: 42 IRMQYTADAIAKSLLELNNASSLEPLKILEERFKNTPFVLLDADNKVKFS 91
          IR+   A  ++   LE +   + E L+ LE   K T  VLL A    +FS
Sbjct: 4  IRVNGEAFKLSLESLEEDPFETKETLETLETLIKQTSVVLLAAGESKRFS 53
>ref|NP_223197.1| cag island protein [Helicobacter pylori J99]
          Length = 252

 Score = 24.3 bits (51), Expect = 2.0
 Identities = 17/69 (24%), Positives = 29/69 (41%), Gaps = 11/69 (15%)

Query: 25  LALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNN-----------ASSLEPLKILEER 73
           ++L F Y+KN+L +     MQY   +     + + N           A ++    I  E+
Sbjct: 102 VSLLFGYSKNSLRDRKDQLMQYCDVSFQTQAMRMFNENIRQFVDKVRAEAIISSNIQREK 161

Query: 74  FKNTPFVLL 82
            KN+P   L
Sbjct: 162 VKNSPLTRL 170
>ref|NP_223384.1| putative [Helicobacter pylori J99]
          Length = 355

 Score = 23.9 bits (50), Expect = 2.6
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 6/72 (8%)

Query: 81  LLDADNKVKFSNIGAFVASFKNDALIKTPYFALKKQGF---YLTDSAPTNRLGVSKIIIA 137
           +L   ++V F  I + +   +    ++  Y A  ++ F   +LTD A    L  +K+I  
Sbjct: 23  VLQEKSQVGFGKIRSKLNDQEKHDSLEEIYKATNEKNFLQLFLTDYA---NLFAAKVIKV 79

Query: 138 EEEIQKNFIPLY 149
            +EI ++ IP Y
Sbjct: 80  SKEIDESLIPSY 91
>ref|NP_223712.1| putative [Helicobacter pylori J99]
          Length = 78

 Score = 23.5 bits (49), Expect = 3.4
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 37 LENTQIRMQYTADAIAKSLLELNNASSLEPLKILEERFKN 76
          LEN  + + Y      +  + LNN  S E  + L+ERF N
Sbjct: 3  LENDSLEITYLGK---RYKISLNNTFSDEMKRTLKERFHN 39
>ref|NP_223263.1| 8-amino-7-oxononanoate synthase [Helicobacter pylori J99]
          Length = 373

 Score = 23.5 bits (49), Expect = 3.4
 Identities = 22/68 (32%), Positives = 32/68 (46%), Gaps = 5/68 (7%)

Query: 94  GAFVASFKND-ALIKTPYFALKKQGFYLTDSAPTNRLGVSKIIIAEEEIQKNFIPLYKMI 152
           G F   F+N+ AL+   YF LK++GF +    P     VSK ++      KN +   K +
Sbjct: 301 GFFTLEFENNPALLNAQYF-LKEKGFLVGAIRPPT---VSKPLLRVSLSLKNSLEDTKEL 356

Query: 153 GYAFLGAS 160
             A L  S
Sbjct: 357 ANALLDYS 364
>ref|NP_223138.1| putative [Helicobacter pylori J99]
          Length = 495

 Score = 23.5 bits (49), Expect = 3.4
 Identities = 9/33 (27%), Positives = 18/33 (54%)

Query: 126 TNRLGVSKIIIAEEEIQKNFIPLYKMIGYAFLG 158
           + R  +  ++I E+E+ KN+   +K + Y   G
Sbjct: 84  SKRYALKDLMIDEKEVLKNYEDFFKQVPYITKG 116
>ref|NP_223986.1| putative [Helicobacter pylori J99]
          Length = 387

 Score = 23.1 bits (48), Expect = 4.4
 Identities = 10/28 (35%), Positives = 15/28 (52%)

Query: 6   KKRFLIIYTLSTLLLVGVLLALFFFYAK 33
           K  FL+   ++ L L    LALFF + +
Sbjct: 278 KNNFLVFSNVALLALCVFFLALFFIFGR 305
>ref|NP_223739.1| putative Outer membrane protein [Helicobacter pylori J99]
          Length = 511

 Score = 23.1 bits (48), Expect = 4.4
 Identities = 8/23 (34%), Positives = 15/23 (64%)

Query: 11 IIYTLSTLLLVGVLLALFFFYAK 33
          ++YT+  LLL+G+L A    + +
Sbjct: 4  LLYTMLALLLIGLLTAYLILFTE 26
>ref|NP_223475.1| putative osmoprotection binding protein [Helicobacter pylori J99]
          Length = 553

 Score = 23.1 bits (48), Expect = 4.4
 Identities = 11/26 (42%), Positives = 18/26 (68%), Gaps = 1/26 (3%)

Query: 7  KRFLIIYTLSTLLLV-GVLLALFFFY 31
          + F+I+   S ++LV GVL+ +F FY
Sbjct: 59 QHFIIVALSSLIVLVFGVLIGVFVFY 84
>ref|NP_223472.1| putative osmoprotection binding protein [Helicobacter pylori J99]
          Length = 161

 Score = 23.1 bits (48), Expect = 4.4
 Identities = 11/26 (42%), Positives = 18/26 (68%), Gaps = 1/26 (3%)

Query: 7  KRFLIIYTLSTLLLV-GVLLALFFFY 31
          + F+I+   S ++LV GVL+ +F FY
Sbjct: 59 QHFIIVALSSLIVLVFGVLIGVFVFY 84
>ref|NP_224050.1| putative [Helicobacter pylori J99]
          Length = 141

 Score = 22.7 bits (47), Expect = 5.7
 Identities = 11/29 (37%), Positives = 16/29 (54%)

Query: 18 LLLVGVLLALFFFYAKNNLLENTQIRMQY 46
          L ++GVLLA F+      L++    R QY
Sbjct: 58 LCVLGVLLACFYLLDAYYLMQERLFREQY 86
>ref|NP_223470.1| FLAGELLAR MOTOR PROTEIN [Helicobacter pylori J99]
          Length = 257

 Score = 22.7 bits (47), Expect = 5.7
 Identities = 17/65 (26%), Positives = 26/65 (39%), Gaps = 3/65 (4%)

Query: 32  AKNNLLENTQIRMQYTADAIAKSLLELNNASSLEPLKILEERFKNTP---FVLLDADNKV 88
           A N      ++ +QY  D    S     + + + P   LE R KN     F   DA++  
Sbjct: 181 AANRAYRVMKVLIQYGVDPNQLSFSSYGSTNPIAPNDSLENRMKNNRVEIFFSTDANDLS 240

Query: 89  KFSNI 93
           K  +I
Sbjct: 241 KIHSI 245
>ref|NP_223442.1| putative [Helicobacter pylori J99]
          Length = 410

 Score = 22.7 bits (47), Expect = 5.7
 Identities = 11/37 (29%), Positives = 21/37 (56%)

Query: 137 AEEEIQKNFIPLYKMIGYAFLGASLFVALIARWLYKI 173
           +++EIQK F  L  +IG   +   + +A I+ +L  +
Sbjct: 315 SQKEIQKTFFYLGNIIGLGGVILGVVLAFISMYLLSV 351
>ref|NP_223089.1| putative [Helicobacter pylori J99]
          Length = 313

 Score = 22.7 bits (47), Expect = 5.7
 Identities = 16/63 (25%), Positives = 29/63 (45%), Gaps = 3/63 (4%)

Query: 21  VGVLLALFFFYAKNNLLENTQIRMQYTADAIAKSLLELNNASSLEPLKILEERFKNTPFV 80
           VGV L L   Y K+ L   T++ + Y    + +  +  N  +    L     +FK + F+
Sbjct: 249 VGVSLTL---YRKHRLEIGTKLPISYLRMGVEEGAIYHNKENDERLLISANNQFKRSSFL 305

Query: 81  LLD 83
           L++
Sbjct: 306 LVN 308
>ref|NP_222875.1| putative [Helicobacter pylori J99]
          Length = 87

 Score = 22.7 bits (47), Expect = 5.7
 Identities = 15/46 (32%), Positives = 19/46 (40%)

Query: 65  EPLKILEERFKNTPFVLLDADNKVKFSNIGAFVASFKNDALIKTPY 110
           E L+I     K TP          +   I    A FK+DAL+K  Y
Sbjct: 20  EALQIYTNILKKTPDNTEALKQMKRLEKIQKNCAPFKHDALLKQHY 65
>ref|NP_223854.1| POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE [Helicobacter pylori J99]
          Length = 688

 Score = 22.3 bits (46), Expect = 7.5
 Identities = 10/39 (25%), Positives = 22/39 (55%)

Query: 51  IAKSLLELNNASSLEPLKILEERFKNTPFVLLDADNKVK 89
           +AK + E ++  SLE +++  E+ K T    +   +K++
Sbjct: 276 VAKKISEAHSEFSLEEIELSLEKVKKTEIRRMIIQDKIR 314
>ref|NP_222895.1| putative [Helicobacter pylori J99]
          Length = 567

 Score = 22.3 bits (46), Expect = 7.5
 Identities = 17/74 (22%), Positives = 34/74 (44%), Gaps = 8/74 (10%)

Query: 71  EERFKNTPFVLLDADNKVKFSNIGAFVASFKNDALIKTPYFALKKQGFYLTDSAPTNRLG 130
           +E+    P  LLD DN+++   +G     F++   ++   +     G  ++   P N  G
Sbjct: 461 QEKEHIIPINLLDLDNEIEIQKLG-----FEDRKDLRAYIYT---YGNLISLEKPLNIKG 512

Query: 131 VSKIIIAEEEIQKN 144
             K +  ++EI K+
Sbjct: 513 KDKDLYEKDEIYKS 526
>ref|NP_224161.1| putative TRANSCRIPTIONAL REGULATOR [Helicobacter pylori J99]
          Length = 213

 Score = 21.9 bits (45), Expect = 9.8
 Identities = 16/42 (38%), Positives = 17/42 (40%)

Query: 68  KILEERFKNTPFVLLDADNKVKFSNIGAFVASFKNDALIKTP 109
           K   ER     F LL  D +V   N        KND LI TP
Sbjct: 36  KEAHERLSVERFNLLLLDVQVPEMNSLELFKRIKNDFLISTP 77
>ref|NP_224001.1| putative TRANSCRIPTIONAL REGULATOR [Helicobacter pylori J99]
          Length = 213

 Score = 21.9 bits (45), Expect = 9.8
 Identities = 16/42 (38%), Positives = 17/42 (40%)

Query: 68  KILEERFKNTPFVLLDADNKVKFSNIGAFVASFKNDALIKTP 109
           K   ER     F LL  D +V   N        KND LI TP
Sbjct: 36  KEAHERLSVERFNLLLLDVQVPEMNSLELFKRIKNDFLISTP 77
>ref|NP_223849.1| TYPE II DNA MODIFICATION ENZYME (METHYLTRANSFERASE) [Helicobacter
           pylori J99]
          Length = 329

 Score = 21.9 bits (45), Expect = 9.8
 Identities = 11/40 (27%), Positives = 17/40 (42%)

Query: 4   SFKKRFLIIYTLSTLLLVGVLLALFFFYAKNNLLENTQIR 43
           SF  RF I+     L+       +F  Y    L+  T+I+
Sbjct: 249 SFCSRFQILNAFENLIKKARFKYIFLSYNNEGLMSETEIK 288
  Database: NC_000921.faa
    Posted date:  Dec 10, 2001  4:36 PM
  Number of letters in database: 494,079
  Number of sequences in database:  1491
  
Lambda     K      H
   0.325    0.141    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 193,884
Number of Sequences: 1491
Number of extensions: 9251
Number of successful extensions: 60
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 41
Number of HSP's gapped (non-prelim): 32
length of query: 174
length of database: 494,079
effective HSP length: 72
effective length of query: 102
effective length of database: 386,727
effective search space: 39446154
effective search space used: 39446154
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 45 (21.9 bits)