>pdb|1D9Z|A Chain A, Crystal Structure Of The Dna Repair Protein Uvrb In
           Complex With Atp
          Length = 657

 Score =  692 bits (1786), Expect = 0.0
 Identities = 357/655 (54%), Positives = 468/655 (70%), Gaps = 7/655 (1%)

Query: 4   FDLKSPYPPAGDQPQAIEALTKSLKNNNHYQTLVGVTGSGKTYTMANIIAQTNKPALIMS 63
           F L +PY P GDQPQAI  L   L+    +QTL+G TG+GKT+T++N+IAQ NKP L+++
Sbjct: 5   FQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISNVIAQVNKPTLVIA 64

Query: 64  HNKTLCAQLYSEFKAFFPHNRVEYFISHFDYYQPESYIPRRDLFIEKDSSINDDLERLRL 123
           HNKTL  QLYSE K FFPHN VEYF+S++DYYQPE+Y+P+ D +IEKD+ IND++++LR 
Sbjct: 65  HNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEAYVPQTDTYIEKDAKINDEIDKLRH 124

Query: 124 SATTSLLGYDDVIVIASVSANYGLGNPEEYLKVMEKIKVGEKRAYKSFLLKLVEMGYSRN 183
           SAT++L    DVI++ASVS  YGLG+PEEY +++  ++VG +    + L +LV++ Y RN
Sbjct: 125 SATSALFERRDVIIVASVSCIYGLGSPEEYRELVVSLRVGMEIERNALLRRLVDIQYDRN 184

Query: 184 EVVFDRGSFRATGECVDIFPAYNDAEFIRIEFFGDEIERIAVFDALEKNEIKRLDSVMLY 243
           ++ F RG+FR  G+ V+IFPA  D   IR+EFFGDEIERI   DAL    +   + V ++
Sbjct: 185 DIDF-RGTFRVRGDVVEIFPASRDEHCIRVEFFGDEIERIREVDALTGKVLGEREHVAIF 243

Query: 244 AASQFAVGSERLNLAIKSIEDELALRLKFFKEQDKMLEYNRLKQRTEHDLEMISATGVCK 303
            AS F    E++ LAI++IE EL  RL   + Q K+LE  RL+QRT +DLEM+   G C 
Sbjct: 244 PASHFVTREEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREMGFCS 303

Query: 304 GIENYARHFTGKAPNETPFCLFDYLGIFEREFLVIVDESHVSLPQFGGMYAGDMSRKSVL 363
           GIENY+RH   + P  TP+ L DY   F  +FL+IVDESHV+LPQ  GMY GD +RK VL
Sbjct: 304 GIENYSRHLALRPPGSTPYTLLDY---FPDDFLIIVDESHVTLPQLRGMYNGDRARKQVL 360

Query: 364 VEYGFRLPSALDNRPLKFDEFIHKNCQFLFVSATPNKLELELSKKNVAEQIIRPTGLLDP 423
           V++GFRLPSALDNRPL F+EF  K  Q ++VSATP   ELE S   V EQIIRPTGLLDP
Sbjct: 361 VDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYELEHSP-GVVEQIIRPTGLLDP 419

Query: 424 KFEVRDSDKQVQDLFDEIKLVVARGERVLITTLTKKMAEELCKYYAEWGLKARYMHSEID 483
             +VR +  Q+ DL  EI+  V R ER L+TTLTKKMAE+L  Y  E G+K  Y+HSEI 
Sbjct: 420 TIDVRPTKGQIDDLIGEIRERVERNERTLVTTLTKKMAEDLTDYLKEAGIKVAYLHSEIK 479

Query: 484 AIERNHIIRSLRLKEFDILIGINLLREGLDLPEVSLVAIMDADKEGFLRSETSLIQTMGR 543
            +ER  IIR LRL ++D+L+GINLLREGLD+PEVSLVAI+DADKEGFLRSE SLIQT+GR
Sbjct: 480 TLERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGR 539

Query: 544 AARNANGKVLLYAKKITQSMQKAFEITSYRRAKQEEFNKIHNITPKTVTRALEEELK--L 601
           AARNANG V++YA  IT+SM+ A + T  RRA QEE+N+ H I P+TV + + + ++   
Sbjct: 540 AARNANGHVIMYADTITKSMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIRDVIRATY 599

Query: 602 RDDEIRIAKALKKDKMPKSEREKIIKELDKKMRECTKNLDFEEAMRLRDEIAQLR 656
             +E  + +A     M K ERE++I+ L+ +M+E  K LDFE A +LRD I +L+
Sbjct: 600 AAEETEMYEAKPAAAMTKQEREELIRTLEAEMKEAAKALDFERAAQLRDIIFELK 654