>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
pdb|1GAX|B Chain B, Crystal Structure Of Thermus Thermophilus Valyl-Trna
Synthetase Complexed With Trna(Val) And Valyl-Adenylate
Analogue
Length = 862
Score = 637 bits (1644), Expect = 0.0
Identities = 364/882 (41%), Positives = 517/882 (58%), Gaps = 47/882 (5%)
Query: 7 PTTYQPEEIEKKIYEICSHRGYFEIDGNEAIQEKNKRFCLMMPPPNVTGVLHIGHALTLS 66
P Y P+ +E K E + + + F + MPPPNVTG LH+GHAL S
Sbjct: 4 PKAYDPKSVEPKWAEKWAKNPFVANP-----KSGKPPFVIFMPPPNVTGSLHMGHALDNS 58
Query: 67 LQDILARYKRMDGYKTLYQPGLDHAGIATQNVVEKQLLSQGIKKEDLGREEFIKKVWEWK 126
LQD L RYKRM G++ ++ PG DHAGIATQ VVE+ LL +G + DLGRE+F+++VW+WK
Sbjct: 59 LQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGKTRHDLGREKFLERVWQWK 118
Query: 127 EKSGGAILEQMKRLGVSAAFSRTRFTMDKGLQRAVKLAFLKWYEKGLIIQDNYMVNWCTK 186
E+SGG IL+Q+KRLG SA +SR FTMD+ RAV+ AF ++Y +GL + +VNWC +
Sbjct: 119 EESGGTILKQLKRLGASADWSREAFTMDEKRSRAVRYAFSRYYHEGLAYRAPRLVNWCPR 178
Query: 187 -DGALSDIEVEYEERKGALYYIRYYLENQKDYLVVATTRPETLFGDSALMVNPNDERYKH 245
+ LSD+EVE E G LY +RY +E ++ +AT RPET+F D A+ V+P DERY+H
Sbjct: 179 CETTLSDLEVETEPTPGKLYTLRYEVEG-GGFIEIATVRPETVFADQAIAVHPEDERYRH 237
Query: 246 LVGQKAILPLIHRTIPIIADEHVEMEFGTGCVKVTPGHDFNDYEVGKRHHLETIKIFDEK 305
L+G++A +PL IPI+AD VE +FGTG +KVTP HD DYE+G+RH L+ + + + +
Sbjct: 238 LLGKRARIPLTEVWIPILADPAVEKDFGTGALKVTPAHDPLDYEIGERHGLKPVSVINLE 297
Query: 306 GILNAH--CGEFENLERLEARDKVVERLKENALLEKIEEHTHQVGHCYRCHNVVEPYVSK 363
G + L+R EAR K VE +E L K E++T + C RC +E +
Sbjct: 298 GRMEGERVPEALRGLDRFEARRKAVELFREAGHLVKEEDYTIALATCSRCGTPIEYAIFP 357
Query: 364 QWFVKPE-IAQSSIEKIQQGLARFYPSNWINNYNAWMRELRPWCISRQLFWGHQIPVFTC 422
QW+++ +A+ ++ +++G F P W W+ ++ W ISRQL+WGHQIP + C
Sbjct: 358 QWWLRMRPLAEEVLKGLRRGDIAFVPERWKKVNMDWLENVKDWNISRQLWWGHQIPAWYC 417
Query: 423 ENNHQFVS-------LDTPLSCPTCKSETLEQDKDVLDTWFSSGLWAFSTLGWGQEKSGL 475
E + Q V+ L+ P SC C S L++D+DV DTWFSS LW STLGW +E
Sbjct: 418 E-DCQAVNVPRPERYLEDPTSCEACGSPRLKRDEDVFDTWFSSALWPLSTLGWPEE---- 472
Query: 476 FNESDLKDFYPNTTLITGFDILFFWVARMLFCSESLLGELPFKDIYLHALVRDEKGEKMS 535
DLK FYP L+TG+DILF WV+RM +GE PFK + LH LV DEKG+KMS
Sbjct: 473 --TEDLKAFYPGDVLVTGYDILFLWVSRMEVSGYHFMGERPFKTVLLHGLVLDEKGQKMS 530
Query: 536 KSKGNVIDPLEMIEKYGADSLRFTLANLCATGRDIKLSTTHLENNKNFANKLFNAASYLK 595
KSKGNVIDPLEM+E+YGAD+LRF L L G+DI+L LE +NFANKL+NAA ++
Sbjct: 531 KSKGNVIDPLEMVERYGADALRFALIYLATGGQDIRLDLRWLEMARNFANKLYNAARFVL 590
Query: 596 LKQESFKDKERLNEYQTPLGRYAKSRLNSATKEARNALDNYRFNDATTLLYRFLWGEFCD 655
L +E F+ KE + T R+ +SRL+ +E + A +Y +W EFCD
Sbjct: 591 LSREGFQAKE---DTPTLADRFMRSRLSRGVEEITALYEALDLAQAAREVYELVWSEFCD 647
Query: 656 WFIEFSKVENEA-----IDELGSVLKEALKLLHPFMPFISESLYHKLSNTELENTESIMV 710
W++E +K +A + L VL LKLLHP MPF++ LY L+ E + +
Sbjct: 648 WYLEAAKPALKAGNAHTLRTLEEVLAVLLKLLHPMMPFLTSELYQALT-----GKEELAL 702
Query: 711 MPYPKDLAQDEKLEHEFEVIKDCIVSLRRLKIMLETPPIVLKEASVGLR-EAIENTERLQ 769
+P+ +DE+ E FE +K + ++R LK PP +E V L E E L+
Sbjct: 703 EAWPEPGGRDEEAERAFEALKQAVTAVRALKAEAGLPP--AQEVRVYLEGETAPVEENLE 760
Query: 770 TYAQKLARLEKVSVISSKPLKSVSDVGEFCQTYANLEN-LDLSPLVARLKKQLEKL--EK 826
+ L + ++ +P K++ LE LD+ R +K+L++L
Sbjct: 761 VF----RFLSRADLLPERPAKALVKAMPRVTARMPLEGLLDVEEWRRRQEKRLKELLALA 816
Query: 827 EKLKLNLHNENFVKNAPKSVLEKAKESLKTLLEKESKIKQEL 868
E+ + L + F + APK V+E + LK LE+ +I++ L
Sbjct: 817 ERSQRKLASPGFREKAPKEVVEAEEARLKENLEQAERIREAL 858