>pdb|1EG0|E Chain E, Fitting Of Components With Known Structure Into An 11.5 A
           Cryo-Em Map Of The E.Coli 70s Ribosome
 pdb|1FJG|H Chain H, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotics Streptomycin,
           Spectinomycin And Paromomycin
 pdb|1IBL|H Chain H, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site And With The Antibiotic Paromomycin
 pdb|1HR0|H Chain H, Crystal Structure Of Initiation Factor If1 Bound To The
           30s Ribosomal Subunit
 pdb|1HNZ|H Chain H, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Hygromycin B
 pdb|1IBM|H Chain H, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With A Messenger Rna Fragment And
           Cognate Transfer Rna Anticodon Stem-Loop Bound At The A
           Site
 pdb|1IBK|H Chain H, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With The Antibiotic Paromomycin
 pdb|1HNW|H Chain H, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Tetracycline
 pdb|1HNX|H Chain H, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit In Complex With Pactamycin
 pdb|1FKA|H Chain H, Structure Of Functionally Activated Small Ribosomal
           Subunit At 3.3 A Resolution
 pdb|1JGQ|K Chain K, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgq, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 pdb|1GIX|K Chain K, Crystal Structure Of The Ribosome At 5.5 A Resolution.
           This File, 1gix, Contains The 30s Ribosome Subunit,
           Three Trna, And Mrna Molecules. 50s Ribosome Subunit Is
           In The File 1giy
 pdb|1JGO|K Chain K, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgo, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 pdb|1JGP|K Chain K, The Path Of Messenger Rna Through The Ribosome. This File,
           1jgp, Contains The 30s Ribosome Subunit, Three Trna, And
           Mrna Molecules. 50s Ribosome Subunit Is In The File 1giy
 pdb|1J5E|H Chain H, Structure Of The Thermus Thermophilus 30s Ribosomal
           Subunit
          Length = 138

 Score =  103 bits (257), Expect = 6e-24
 Identities = 56/138 (40%), Positives = 80/138 (57%), Gaps = 7/138 (5%)

Query: 1   MVNDIIADSLTRLRNASMRRLEFTQLYYAKIVVSILEIFKEKGFIKDFNVKDKDKKQSVY 60
           M+ D IAD LTR+RNA+    E T +  ++    IL I   +GFIK +   D D K  + 
Sbjct: 1   MLTDPIADMLTRIRNATRVYKESTDVPASRFKEEILRILAREGFIKGYERVDVDGKPYLR 60

Query: 61  VQLAY-------DEKGHSKISEVKRLSKPGRRVYKQKNELKRFKNGYGVIVVSTSKGVIT 113
           V L Y       D +    I  ++R+SKPGRRVY    E+ R + G G+ ++STSKGV+T
Sbjct: 61  VYLKYGPRRQGPDPRPEQVIHHIRRISKPGRRVYVGVKEIPRVRRGLGIAILSTSKGVLT 120

Query: 114 NEEAYRQNVGGEVLCSIW 131
           + EA +  VGGE++C +W
Sbjct: 121 DREARKLGVGGELICEVW 138