>pdb|1KSF|X Chain X, Crystal Structure Of Clpa, An Hsp100 Chaperone And
           Regulator Of Clpap Protease: Structural Basis Of
           Differences In Function Of The Two Aaa+ Atpase Domains
          Length = 758

 Score =  545 bits (1403), Expect = e-156
 Identities = 300/757 (39%), Positives = 471/757 (61%), Gaps = 30/757 (3%)

Query: 5   NQDLNEVLNQALNLALDLNHALCTTEHVLLVILEHESGEKIIGTLERDDYDKLKQILKDY 64
           NQ+L   LN A   A +  H   T EH+LL +L + S  + +     D    L+Q L+ +
Sbjct: 3   NQELELSLNMAFARAREHRHEFMTVEHLLLALLSNPSAREALEACSVD-LVALRQELEAF 61

Query: 65  LLQYVPL----KSDPAKMPARSF--VLLRMLKRMYASCFESVGVEELLILMLDHPDCYAS 118
           + Q  P+    + +    P  SF  VL R +  + +S    V    +L+ +    +  A+
Sbjct: 62  IEQTTPVLPASEEERDTQPTLSFQRVLQRAVFHVQSSGRNEVTGANVLVAIFSEQESQAA 121

Query: 119 KLMDSFGIARLYSNPALLDLDNHGIPNDI-----------NDNEEAPKNTPLKKYAKNLS 167
            L+    ++RL     +++  +HG   D            N  E+A     L+ +  NL+
Sbjct: 122 YLLRKHEVSRL----DVVNFISHGTRKDEPTQSSDPGSQPNSEEQAGGEERLENFTTNLN 177

Query: 168 ALAQDNALDPVIGREEEILRVIEILGRRKKNNPLLIGEAGVGKTSIAEALALKIAQKEVP 227
            LA+   +DP+IGRE+E+ R I++L RR+KNNPLL+GE+GVGKT+IAE LA +I Q +VP
Sbjct: 178 QLARVGGIDPLIGREKELERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRIVQGDVP 237

Query: 228 EFLQEYEVYSLDLALMVAGAKYRGDFEKRLKKTLKEIQQNGRIILFIDEIHTLLGTGSSN 287
           E + +  +YSLD+  ++AG KYRGDFEKR K  LK+++Q+   ILFIDEIHT++G G+++
Sbjct: 238 EVMADCTIYSLDIGSLLAGTKYRGDFEKRFKALLKQLEQDTNSILFIDEIHTIIGAGAAS 297

Query: 288 AGSLDAANILKPVLTDGSLKCLGATTFEEYRSVFEKDKAFNRRFSVIKVEEPSKEACYLI 347
            G +DAAN++KP+L+ G ++ +G+TT++E+ ++FEKD+A  RRF  I + EPS E    I
Sbjct: 298 GGQVDAANLIKPLLSSGKIRVIGSTTYQEFSNIFEKDRALARRFQKIDITEPSIEETVQI 357

Query: 348 LKKIAPLYEEHHQVRYDESVFKACVDLTSDYMHDKFLPDKAIELLDEVGSRKKISP--KK 405
           +  + P YE HH VRY     +A V+L   Y++D+ LPDKAI+++DE G+R ++ P  K+
Sbjct: 358 INGLKPKYEAHHDVRYTAKAVRAAVELAVKYINDRHLPDKAIDVIDEAGARARLMPVSKR 417

Query: 406 GKKIGVDDVKETLALKLKIPKMRLSSDKKALLRNLEKSLKNKIFAQAEAISLVSNAIKIQ 465
            K + V D++  +A   +IP+  +S   +  L+NL   LK  +F Q +AI  ++ AIK+ 
Sbjct: 418 KKTVNVADIESVVARIARIPEKSVSQSDRDTLKNLGDRLKMLVFGQDKAIEALTEAIKMA 477

Query: 466 HCGLSAKNKPVGSFLFVGPSGVGKTELAKELALNLNLHFERFDMSEYKEAHSVAKLIGSP 525
             GL  ++KPVGSFLF GP+GVGKTE+  +L+  L +   RFDMSEY E H+V++LIG+P
Sbjct: 478 RAGLGHEHKPVGSFLFAGPTGVGKTEVTVQLSKALGIELLRFDMSEYMERHTVSRLIGAP 537

Query: 526 SGYVGFEQGGLLVNAIKKHPHCLLLLDEIEKAHSNVYDLLLQVMDNATLSDNLGNQASFK 585
            GYVGF+QGGLL +A+ KHPH +LLLDEIEKAH +V+++LLQVMDN TL+DN G +A F+
Sbjct: 538 PGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHPDVFNILLQVMDNGTLTDNNGRKADFR 597

Query: 586 HVILIMTSNVGSK--DKDTLGFFSAKN-TKYDKAVKELLTPELRSRIDAIVPFNALSLED 642
           +V+L+MT+N G +  ++ ++G     N T   + +K++ TPE R+R+D I+ F+ LS + 
Sbjct: 598 NVVLVMTTNAGVRETERKSIGLIHQDNSTDAMEEIKKIFTPEFRNRLDNIIWFDHLSTDV 657

Query: 643 FERIVSVELDKLKALALEQDITLKFHKEVVKFIAQKSYQTTLGAREIKKIIHNEIKTKLS 702
             ++V   + +L+    ++ ++L+  +E   ++A+K Y   +GAR + ++I + +K  L+
Sbjct: 658 IHQVVDKFIVELQVQLDQKGVSLEVSQEARNWLAEKGYDRAMGARPMARVIQDNLKKPLA 717

Query: 703 DILLLQSFKKPCKIACLL--EKNQLVLKEIKRAQKVK 737
           + LL  S     ++   L  EKN+L     + AQK K
Sbjct: 718 NELLFGSLVDGGQVTVALDKEKNELTY-GFQSAQKHK 753