>pdb|1C7Y|A Chain A, E.Coli Ruva-Holliday Junction Complex
 pdb|1HJP|   Holliday Junction Binding Protein Ruva From E. Coli
 pdb|1BDX|A Chain A, E. Coli Ruva With Bound Dna Holliday Junction, Alpha
           Carbons And Phosphate Atoms Only
 pdb|1BDX|B Chain B, E. Coli Ruva With Bound Dna Holliday Junction, Alpha
           Carbons And Phosphate Atoms Only
 pdb|1BDX|C Chain C, E. Coli Ruva With Bound Dna Holliday Junction, Alpha
           Carbons And Phosphate Atoms Only
 pdb|1BDX|D Chain D, E. Coli Ruva With Bound Dna Holliday Junction, Alpha
           Carbons And Phosphate Atoms Only
          Length = 203

 Score =  103 bits (256), Expect = 2e-23
 Identities = 74/200 (37%), Positives = 108/200 (54%), Gaps = 21/200 (10%)

Query: 1   MIVGLIGVVEKISALEVHIEVQGVVYGVQVSMRTA-ALLEAGQKARLKILQVIKEDAHLL 59
           MI  L G++ +     V IEV GV Y V + M     L EAGQ+A +    V++EDA LL
Sbjct: 1   MIGRLRGIIIEKQPPLVLIEVGGVGYEVHMPMTCFYELPEAGQEAIVFTHFVVREDAQLL 60

Query: 60  YGFLEEGEKILFERLLKINGVGGRIALAILSSFSPNEFESIIATKEVKRLQQVPGIGKKL 119
           YGF  + E+ LF+ L+K NGVG ++ALAILS  S  +F + +  +EV  L ++PGIGKK 
Sbjct: 61  YGFNNKQERTLFKELIKTNGVGPKLALAILSGMSAQQFVNAVEREEVGALVKLPGIGKKT 120

Query: 120 ADKIMVDLIGFF-------------------IQDENRPARNEVFLALESLGFKSAEINQ- 159
           A++++V++   F                          A  E   AL +LG+K  E ++ 
Sbjct: 121 AERLIVEMKDRFKGLHGDLFTPAADLVLTSPASPATDDAEQEAVAALVALGYKPQEASRM 180

Query: 160 VLKTLKPNLSIEAAIKEALQ 179
           V K  +P+ S E  I+EAL+
Sbjct: 181 VSKIARPDASSETLIREALR 200