BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645780|ref|NP_207957.1| glucose-6-phosphate
isomerase (pgi) [Helicobacter pylori 26695]
(545 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1GZD|A Chain A, Crystal Structure Of Pig Phosphoglucose... 564 e-162
pdb|1KOJ|A Chain A, Crystal Structure Of Rabbit Phosphogluc... 558 e-160
pdb|1HM5|A Chain A, Crystal Structure Analysis Of The Rabbi... 558 e-160
pdb|1IAT|A Chain A, Crystal Structure Of Human Phosphogluco... 557 e-160
pdb|1IRI|A Chain A, Crystal Structure Of Human Autocrine Mo... 557 e-160
pdb|1C7Q|A Chain A, The Crystal Structure Of Phosphoglucose... 73 7e-14
pdb|1BUU|A Chain A, One Ho3+ Form Of Rat Mannose-Binding Pr... 28 3.4
pdb|1GO3|F Chain F, Structure Of An Archeal Homolog Of The ... 27 7.6
pdb|1BCH|1 Chain 1, Mannose-Binding Protein-A Mutant (Qpdwg... 26 9.9
pdb|1AFB|1 Chain 1, C-Type Lectin, Calcium-Binding Protein ... 26 9.9
pdb|1KX0|A Chain A, Rat Mannose Protein A (H189v I207v) Com... 26 9.9
pdb|1FIH|A Chain A, N-Acetylgalactosamine Binding Mutant Of... 26 9.9
pdb|1KWT|A Chain A, Rat Mannose Binding Protein A (Native, ... 26 9.9
pdb|1KWZ|A Chain A, Rat Mannose Protein A (H189v) Complexed... 26 9.9
pdb|3KMB|1 Chain 1, Complex Of 3'-Sulfo-Lewis-X With A Sele... 26 9.9
pdb|1BCJ|1 Chain 1, Mannose-Binding Protein-A Mutant (Qpdwg... 26 9.9
>pdb|1GZD|A Chain A, Crystal Structure Of Pig Phosphoglucose Isomerase
pdb|1GZV|A Chain A, The Crystal Structure Of Phosphoglucose Isomerase From Pig
Muscle Complexed With 5-Phosphoarabinonate
Length = 557
Score = 564 bits (1454), Expect = e-162
Identities = 287/547 (52%), Positives = 381/547 (69%), Gaps = 7/547 (1%)
Query: 2 LTQLKTYPKLLKHYEEIK-EVHMRDWFFKDKERASRYFLQFES----LSLDYSKNRLNDT 56
LTQ + KL Y E + ++++R F DK+R + + L + + LDYSKN + +
Sbjct: 3 LTQNPQFKKLQTWYHEHRSDLNLRRLFEGDKDRFNHFSLNLNTNHGRILLDYSKNLVTEA 62
Query: 57 TLKLLFELANDCSLKEKIEAMFKGEKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIR 116
+++L +LA ++ E MF GEKIN TE RAVLH ALR+ ++T IL+D +V+ +
Sbjct: 63 VMQMLVDLAKSRGVEAARERMFNGEKINFTEDRAVLHVALRNRSNTPILVDGKDVMPEVN 122
Query: 117 SVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMVCTALKRYAHPRLKMHF 176
VL++M++F VRSG+ GY+ + ITD++NIGIGGSDLG LMV ALK Y+ ++ F
Sbjct: 123 RVLEKMKSFCKRVRSGEWKGYSGKSITDVINIGIGGSDLGPLMVTEALKPYSAEGPRVWF 182
Query: 177 VSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHF 236
VSN+DGT I L LNP S+LFI+ASKTF+TQET+TNA TA++WF++ + D +AKHF
Sbjct: 183 VSNIDGTHIAKTLATLNPESSLFIIASKTFTTQETITNAETAKEWFLQSAKDPSAVAKHF 242
Query: 237 VAVSTNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLM 296
VA+STN V++FGID NMFEFWD+VGGRYSLWSAIGLSI +++G NF LL GA+ M
Sbjct: 243 VALSTNTTKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDNFEQLLSGAHWM 302
Query: 297 DEHFRNAPFESNLPVLMGLIGVWYINFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKR 356
D+HFR P E N PVL+ L+G+WYINFF ++H + PYDQYL F + QQ DMESNGK
Sbjct: 303 DQHFRTTPLEKNAPVLLALLGIWYINFFGCETHAMLPYDQYLHRFAAYFQQGDMESNGKY 362
Query: 357 ISKKGEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFIASLD-KKPNAKG-HHE 414
I+K G + + T P+VWG+ G N QHAF+QL+HQGT +IP DF+ + + P KG HH+
Sbjct: 363 ITKSGTRVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHK 422
Query: 415 ILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKIS 474
IL +N LAQ +A MKGKS EEA EL G ++ + L H+VF GNRP+N ++ K++
Sbjct: 423 ILLANFLAQTEALMKGKSTEEARKELQAAGKSPEDFEKLLPHKVFEGNRPTNSIVFTKLT 482
Query: 475 PSNIGALVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTK 534
P +GAL+A+YEHK+FVQGVIWDINSFDQWGVELGK+LA I EL+G DSST
Sbjct: 483 PFILGALIAMYEHKIFVQGVIWDINSFDQWGVELGKQLAKKIEPELDGSSPVTSHDSSTN 542
Query: 535 HLIELYK 541
LI K
Sbjct: 543 GLINFIK 549
>pdb|1KOJ|A Chain A, Crystal Structure Of Rabbit Phosphoglucose Isomerase
Complexed With 5-Phospho-D-Arabinonohydroxamic Acid
pdb|1KOJ|B Chain B, Crystal Structure Of Rabbit Phosphoglucose Isomerase
Complexed With 5-Phospho-D-Arabinonohydroxamic Acid
pdb|1DQR|A Chain A, Crystal Structure Of Rabbit Phosphoglucose Isomerase, A
Glycolytic Enzyme That Moonlights As Neuroleukin,
Autocrine Motility Factor, And Differentiation Mediator
pdb|1DQR|B Chain B, Crystal Structure Of Rabbit Phosphoglucose Isomerase, A
Glycolytic Enzyme That Moonlights As Neuroleukin,
Autocrine Motility Factor, And Differentiation Mediator
Length = 557
Score = 558 bits (1439), Expect = e-160
Identities = 285/551 (51%), Positives = 376/551 (67%), Gaps = 7/551 (1%)
Query: 2 LTQLKTYPKLLK-HYEEIKEVHMRDWFFKDKERASRYFLQFES----LSLDYSKNRLNDT 56
LT+ + KL + H E E+++R F DKER + + L + + LDYSKN + +
Sbjct: 3 LTRNPQFQKLQQWHREHGSELNLRHLFDTDKERFNHFSLTLNTNHGHILLDYSKNLVTEE 62
Query: 57 TLKLLFELANDCSLKEKIEAMFKGEKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIR 116
+ +L +LA ++ E+MF GEKIN+TE RAVLH ALR+ ++T I++D +V+ +
Sbjct: 63 VMHMLLDLAKSRGVEAARESMFNGEKINSTEDRAVLHVALRNRSNTPIVVDGKDVMPEVN 122
Query: 117 SVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMVCTALKRYAHPRLKMHF 176
VL +M+AF VRSG GYT + ITD++NIGIGGSDLG LMV ALK Y+ ++ F
Sbjct: 123 KVLDKMKAFCQRVRSGDWKGYTGKTITDVINIGIGGSDLGPLMVTEALKPYSSGGPRVWF 182
Query: 177 VSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHF 236
VSN+DGT I L LNP S+LFI+ASKTF+TQET+TNA TA+ WF+ + D +AKHF
Sbjct: 183 VSNIDGTHIAKTLACLNPESSLFIIASKTFTTQETITNAKTAKDWFLLSAKDPSTVAKHF 242
Query: 237 VAVSTNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLM 296
VA+STN V++FGID NMFEFWD+VGGRYSLWSAIGLSI +++G NF LL GA+ M
Sbjct: 243 VALSTNTAKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDNFEQLLSGAHWM 302
Query: 297 DEHFRNAPFESNLPVLMGLIGVWYINFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKR 356
D+HFR P E N PVL+ ++G+WYIN F ++ + PYDQYL F + QQ DMESNGK
Sbjct: 303 DQHFRTTPLEKNAPVLLAMLGIWYINCFGCETQAVLPYDQYLHRFAAYFQQGDMESNGKY 362
Query: 357 ISKKGEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFIASLD-KKPNAKG-HHE 414
I+K G + + T P+VWG+ G N QHAF+QL+HQGT +IP DF+ + + P KG HH+
Sbjct: 363 ITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHK 422
Query: 415 ILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKIS 474
IL +N LAQ +A MKGKS EEA EL G ++ L H+VF GNRP+N ++ K++
Sbjct: 423 ILLANFLAQTEALMKGKSTEEARKELQAAGKSPEDLMKLLPHKVFEGNRPTNSIVFTKLT 482
Query: 475 PSNIGALVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTK 534
P +GAL+A+YEHK+FVQGV+WDINSFDQWGVELGK+LA I EL+G DSST
Sbjct: 483 PFILGALIAMYEHKIFVQGVVWDINSFDQWGVELGKQLAKKIEPELDGSSPVTSHDSSTN 542
Query: 535 HLIELYKNYNQ 545
LI K +
Sbjct: 543 GLINFIKQQRE 553
>pdb|1HM5|A Chain A, Crystal Structure Analysis Of The Rabbit D-Glucose 6-
Phosphate Isomerase (No Ligand Bound)
pdb|1HM5|B Chain B, Crystal Structure Analysis Of The Rabbit D-Glucose 6-
Phosphate Isomerase (No Ligand Bound)
pdb|1G98|A Chain A, Crystal Structure Analysis Of Rabbit Phosphoglucose
Isomerase Complexed With 5-Phosphoarabinonate, A
Transition State Analogue
pdb|1G98|B Chain B, Crystal Structure Analysis Of Rabbit Phosphoglucose
Isomerase Complexed With 5-Phosphoarabinonate, A
Transition State Analogue
pdb|1HOX|A Chain A, Crystal Structure Of Rabbit Phosphoglucose Isomerase
Complexed With Fructose-6-Phosphate
pdb|1HOX|B Chain B, Crystal Structure Of Rabbit Phosphoglucose Isomerase
Complexed With Fructose-6-Phosphate
Length = 558
Score = 558 bits (1439), Expect = e-160
Identities = 285/551 (51%), Positives = 376/551 (67%), Gaps = 7/551 (1%)
Query: 2 LTQLKTYPKLLK-HYEEIKEVHMRDWFFKDKERASRYFLQFES----LSLDYSKNRLNDT 56
LT+ + KL + H E E+++R F DKER + + L + + LDYSKN + +
Sbjct: 4 LTRNPQFQKLQQWHREHGSELNLRHLFDTDKERFNHFSLTLNTNHGHILLDYSKNLVTEE 63
Query: 57 TLKLLFELANDCSLKEKIEAMFKGEKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIR 116
+ +L +LA ++ E+MF GEKIN+TE RAVLH ALR+ ++T I++D +V+ +
Sbjct: 64 VMHMLLDLAKSRGVEAARESMFNGEKINSTEDRAVLHVALRNRSNTPIVVDGKDVMPEVN 123
Query: 117 SVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMVCTALKRYAHPRLKMHF 176
VL +M+AF VRSG GYT + ITD++NIGIGGSDLG LMV ALK Y+ ++ F
Sbjct: 124 KVLDKMKAFCQRVRSGDWKGYTGKTITDVINIGIGGSDLGPLMVTEALKPYSSGGPRVWF 183
Query: 177 VSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHF 236
VSN+DGT I L LNP S+LFI+ASKTF+TQET+TNA TA+ WF+ + D +AKHF
Sbjct: 184 VSNIDGTHIAKTLACLNPESSLFIIASKTFTTQETITNAKTAKDWFLLSAKDPSTVAKHF 243
Query: 237 VAVSTNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLM 296
VA+STN V++FGID NMFEFWD+VGGRYSLWSAIGLSI +++G NF LL GA+ M
Sbjct: 244 VALSTNTAKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDNFEQLLSGAHWM 303
Query: 297 DEHFRNAPFESNLPVLMGLIGVWYINFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKR 356
D+HFR P E N PVL+ ++G+WYIN F ++ + PYDQYL F + QQ DMESNGK
Sbjct: 304 DQHFRTTPLEKNAPVLLAMLGIWYINCFGCETQAVLPYDQYLHRFAAYFQQGDMESNGKY 363
Query: 357 ISKKGEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFIASLD-KKPNAKG-HHE 414
I+K G + + T P+VWG+ G N QHAF+QL+HQGT +IP DF+ + + P KG HH+
Sbjct: 364 ITKSGARVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHK 423
Query: 415 ILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKIS 474
IL +N LAQ +A MKGKS EEA EL G ++ L H+VF GNRP+N ++ K++
Sbjct: 424 ILLANFLAQTEALMKGKSTEEARKELQAAGKSPEDLMKLLPHKVFEGNRPTNSIVFTKLT 483
Query: 475 PSNIGALVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTK 534
P +GAL+A+YEHK+FVQGV+WDINSFDQWGVELGK+LA I EL+G DSST
Sbjct: 484 PFILGALIAMYEHKIFVQGVVWDINSFDQWGVELGKQLAKKIEPELDGSSPVTSHDSSTN 543
Query: 535 HLIELYKNYNQ 545
LI K +
Sbjct: 544 GLINFIKQQRE 554
>pdb|1IAT|A Chain A, Crystal Structure Of Human Phosphoglucose
IsomeraseNEUROLEUKINAUTOCRINE MOTILITY FACTORMATURATION
Factor
Length = 557
Score = 557 bits (1436), Expect = e-160
Identities = 282/551 (51%), Positives = 381/551 (68%), Gaps = 7/551 (1%)
Query: 2 LTQLKTYPKLLKHYEEIK-EVHMRDWFFKDKERASRYFLQFES----LSLDYSKNRLNDT 56
LT+ + KL + Y E + E+++R F +K+R + + L + + +DYSKN + +
Sbjct: 3 LTRDPQFQKLQQWYREHRSELNLRRLFDANKDRFNHFSLTLNTNHGHILVDYSKNLVTED 62
Query: 57 TLKLLFELANDCSLKEKIEAMFKGEKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIR 116
+++L +LA ++ E MF GEKIN TE RAVLH ALR+ ++T IL+D +V+ +
Sbjct: 63 VMRMLVDLAKSRGVEAARERMFNGEKINYTEGRAVLHVALRNRSNTPILVDGKDVMPEVN 122
Query: 117 SVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMVCTALKRYAHPRLKMHF 176
VL +M++F VRSG GYT + ITD++NIGIGGSDLG LMV ALK Y+ ++ +
Sbjct: 123 KVLDKMKSFCQRVRSGDWKGYTGKTITDVINIGIGGSDLGPLMVTEALKPYSSGGPRVWY 182
Query: 177 VSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHF 236
VSN+DGT I L +LNP S+LFI+ASKTF+TQET+TNA TA++WF++ + D +AKHF
Sbjct: 183 VSNIDGTHIAKTLAQLNPESSLFIIASKTFTTQETITNAETAKEWFLQAAKDPSAVAKHF 242
Query: 237 VAVSTNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLM 296
VA+STN V++FGID NMFEFWD+VGGRYSLWSAIGLSI +++G NF LL GA+ M
Sbjct: 243 VALSTNTTKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDNFEQLLSGAHWM 302
Query: 297 DEHFRNAPFESNLPVLMGLIGVWYINFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKR 356
D+HFR P E N PVL+ L+G+WYIN F ++H + PYDQYL F + QQ DMESNGK
Sbjct: 303 DQHFRTTPLEKNAPVLLALLGIWYINCFGCETHAMLPYDQYLHRFAAYFQQGDMESNGKY 362
Query: 357 ISKKGEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFIASLD-KKPNAKG-HHE 414
I+K G + + T P+VWG+ G N QHAF+QL+HQGT +IP DF+ + + P KG HH+
Sbjct: 363 ITKSGTRVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHK 422
Query: 415 ILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKIS 474
IL +N LAQ +A M+GKS EEA EL G ++ + L H+VF GNRP+N ++ K++
Sbjct: 423 ILLANFLAQTEALMRGKSTEEARKELQAAGKSPEDLERLLPHKVFEGNRPTNSIVFTKLT 482
Query: 475 PSNIGALVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTK 534
P +GALVA+YEHK+FVQG+IWDINSFDQWGVELGK+LA I EL+G D+ST
Sbjct: 483 PFMLGALVAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPELDGSAQVTSHDASTN 542
Query: 535 HLIELYKNYNQ 545
LI K +
Sbjct: 543 GLINFIKQQRE 553
>pdb|1IRI|A Chain A, Crystal Structure Of Human Autocrine Motility Factor
Complexed With An Inhibitor
pdb|1IRI|B Chain B, Crystal Structure Of Human Autocrine Motility Factor
Complexed With An Inhibitor
pdb|1IRI|C Chain C, Crystal Structure Of Human Autocrine Motility Factor
Complexed With An Inhibitor
pdb|1IRI|D Chain D, Crystal Structure Of Human Autocrine Motility Factor
Complexed With An Inhibitor
pdb|1JIQ|A Chain A, Crystal Structure Of Human Autocrine Motility Factor
pdb|1JIQ|B Chain B, Crystal Structure Of Human Autocrine Motility Factor
pdb|1JIQ|C Chain C, Crystal Structure Of Human Autocrine Motility Factor
pdb|1JIQ|D Chain D, Crystal Structure Of Human Autocrine Motility Factor
Length = 558
Score = 557 bits (1436), Expect = e-160
Identities = 282/551 (51%), Positives = 381/551 (68%), Gaps = 7/551 (1%)
Query: 2 LTQLKTYPKLLKHYEEIK-EVHMRDWFFKDKERASRYFLQFES----LSLDYSKNRLNDT 56
LT+ + KL + Y E + E+++R F +K+R + + L + + +DYSKN + +
Sbjct: 4 LTRDPQFQKLQQWYREHRSELNLRRLFDANKDRFNHFSLTLNTNHGHILVDYSKNLVTED 63
Query: 57 TLKLLFELANDCSLKEKIEAMFKGEKINTTEKRAVLHTALRSLNDTEILLDNMEVLKSIR 116
+++L +LA ++ E MF GEKIN TE RAVLH ALR+ ++T IL+D +V+ +
Sbjct: 64 VMRMLVDLAKSRGVEAARERMFNGEKINYTEGRAVLHVALRNRSNTPILVDGKDVMPEVN 123
Query: 117 SVLKRMRAFSDSVRSGKRLGYTNQVITDIVNIGIGGSDLGALMVCTALKRYAHPRLKMHF 176
VL +M++F VRSG GYT + ITD++NIGIGGSDLG LMV ALK Y+ ++ +
Sbjct: 124 KVLDKMKSFCQRVRSGDWKGYTGKTITDVINIGIGGSDLGPLMVTEALKPYSSGGPRVWY 183
Query: 177 VSNVDGTQILDVLEKLNPASTLFIVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHF 236
VSN+DGT I L +LNP S+LFI+ASKTF+TQET+TNA TA++WF++ + D +AKHF
Sbjct: 184 VSNIDGTHIAKTLAQLNPESSLFIIASKTFTTQETITNAETAKEWFLQAAKDPSAVAKHF 243
Query: 237 VAVSTNKEAVQQFGIDEHNMFEFWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLM 296
VA+STN V++FGID NMFEFWD+VGGRYSLWSAIGLSI +++G NF LL GA+ M
Sbjct: 244 VALSTNTTKVKEFGIDPQNMFEFWDWVGGRYSLWSAIGLSIALHVGFDNFEQLLSGAHWM 303
Query: 297 DEHFRNAPFESNLPVLMGLIGVWYINFFQSKSHLIAPYDQYLRHFPKFIQQLDMESNGKR 356
D+HFR P E N PVL+ L+G+WYIN F ++H + PYDQYL F + QQ DMESNGK
Sbjct: 304 DQHFRTTPLEKNAPVLLALLGIWYINCFGCETHAMLPYDQYLHRFAAYFQQGDMESNGKY 363
Query: 357 ISKKGEIIPYDTCPVVWGDMGINAQHAFFQLLHQGTHLIPIDFIASLD-KKPNAKG-HHE 414
I+K G + + T P+VWG+ G N QHAF+QL+HQGT +IP DF+ + + P KG HH+
Sbjct: 364 ITKSGTRVDHQTGPIVWGEPGTNGQHAFYQLIHQGTKMIPCDFLIPVQTQHPIRKGLHHK 423
Query: 415 ILFSNVLAQAQAFMKGKSYEEALGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKIS 474
IL +N LAQ +A M+GKS EEA EL G ++ + L H+VF GNRP+N ++ K++
Sbjct: 424 ILLANFLAQTEALMRGKSTEEARKELQAAGKSPEDLERLLPHKVFEGNRPTNSIVFTKLT 483
Query: 475 PSNIGALVALYEHKVFVQGVIWDINSFDQWGVELGKELAVPILQELEGHKSNAYFDSSTK 534
P +GALVA+YEHK+FVQG+IWDINSFDQWGVELGK+LA I EL+G D+ST
Sbjct: 484 PFMLGALVAMYEHKIFVQGIIWDINSFDQWGVELGKQLAKKIEPELDGSAQVTSHDASTN 543
Query: 535 HLIELYKNYNQ 545
LI K +
Sbjct: 544 GLINFIKQQRE 554
>pdb|1C7Q|A Chain A, The Crystal Structure Of Phosphoglucose IsomeraseAUTOCRINE
Motility FactorNEUROLEUKIN COMPLEXED WITH ITS
CARBOHYDRATE Phosphate Inhibitors And Its Substrate
Recognition Mechanis
pdb|1B0Z|A Chain A, The Crystal Structure Of Phosphoglucose Isomerase-An
Enzyme With Autocrine Motility Factor Activity In Tumor
Cells
pdb|2PGI| The Crystal Structure Of Phosphoglucose Isomerase - An Enzyme With
Autocrine Motility Factor Activity In Tumor Cells
pdb|1C7R|A Chain A, The Crystal Structure Of Phosphoglucose IsomeraseAUTOCRINE
Motility FactorNEUROLEUKIN COMPLEXED WITH ITS
CARBOHYDRATE Phosphate Inhibitors And Its Substrate
Recognition Mechanis
Length = 445
Score = 73.2 bits (178), Expect = 7e-14
Identities = 94/375 (25%), Positives = 161/375 (42%), Gaps = 36/375 (9%)
Query: 145 IVNIGIGGSDLGALMVCTALKRYAHPRL----KMHFVS-NVDGTQILDVLEKLNPASTLF 199
+V IGIGGS LGA AL H ++ +++F N+ T I +L+ L
Sbjct: 75 LVVIGIGGSYLGARAAIEALSHTFHNQMNDTTQIYFAGQNISSTYISHLLDVLEGKDLSI 134
Query: 200 IVASKTFSTQETLTNALTARKWFVERSGDEKHIAKHFVAVSTNKEAVQQFGIDE-HNMFE 258
V SK+ +T E R + ++ G E+ + +V K A+++ E + F
Sbjct: 135 NVISKSGTTTEPAIAFRIFRDYMEKKYGKEEARKRIYVTTDRTKGALKKLADQEGYETFV 194
Query: 259 FWDFVGGRYSLWSAIGLSIMIYLGKKNFNALLKGAYLMDEHFRNAPFESNLPVLMGLIGV 318
D +GGRYS+ +A+GL + I + N + +++GA + N +N V
Sbjct: 195 IPDNIGGRYSVLTAVGL-LPIAVAGLNIDRMMEGAASAYHKYNNPDLLTNESYQYA--AV 251
Query: 319 WYINFFQSKS-HLIAPYDQYLRHFPKFIQQLDMESNGKRISKKGEIIPYDTCPVVWGDMG 377
I + + K+ L+ Y+ L + ++ +QL ES GK +KG MG
Sbjct: 252 RNILYRKGKAIELLVNYEPSLHYVSEWWKQLFGESEGK--DQKGLFPASVDFTTDLHSMG 309
Query: 378 INAQHAFFQLLHQGTHLIPIDFIASLDKKP-NAKGHHEILFSNVLAQAQAFMKGKSYEEA 436
Q L+ H+ ++ + P N G + F+ GK+ +E
Sbjct: 310 QYVQEGRRNLIETVLHVKKPQIELTIQEDPENIDGLN-------------FLAGKTLDE- 355
Query: 437 LGELLFKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGALVALYEHKVFVQGVIW 496
+ + F+G LAH G P+ I+ L++++ G +V +E + G +
Sbjct: 356 VNKKAFQGTL------LAH---VDGGVPNLIVELDEMNEYTFGEMVYFFEKACGISGHLL 406
Query: 497 DINSFDQWGVELGKE 511
+N FDQ GVE K+
Sbjct: 407 GVNPFDQPGVEAYKK 421
>pdb|1BUU|A Chain A, One Ho3+ Form Of Rat Mannose-Binding Protein A
Length = 168
Score = 27.7 bits (60), Expect = 3.4
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 15/65 (23%)
Query: 79 KGEKINTTEKRAVLHTALRSLNDTEILLDNMEV----LKSIRSVLKRMRAFSDSVRSGKR 134
KG+K + + RA+ E+ L NME LKS + ++ AFS +SGK+
Sbjct: 9 KGQKGDRGDSRAI-----------EVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKK 57
Query: 135 LGYTN 139
TN
Sbjct: 58 FFVTN 62
>pdb|1GO3|F Chain F, Structure Of An Archeal Homolog Of The Eukaryotic Rna
Polymerase Ii Rpb4RPB7 COMPLEX
pdb|1GO3|N Chain N, Structure Of An Archeal Homolog Of The Eukaryotic Rna
Polymerase Ii Rpb4RPB7 COMPLEX
Length = 107
Score = 26.6 bits (57), Expect = 7.6
Identities = 14/44 (31%), Positives = 21/44 (46%)
Query: 442 FKGLDKDEAKDLAHHRVFFGNRPSNILLLEKISPSNIGALVALY 485
F LDK+EAK L + G + + I P ++ L A+Y
Sbjct: 44 FAKLDKEEAKKLVEELISLGIDEKTAVKIADILPEDLDDLRAIY 87
>pdb|1BCH|1 Chain 1, Mannose-Binding Protein-A Mutant (Qpdwgh) Complexed With
N-Acetyl-D-Galactosamine
pdb|1BCH|2 Chain 2, Mannose-Binding Protein-A Mutant (Qpdwgh) Complexed With
N-Acetyl-D-Galactosamine
pdb|1BCH|3 Chain 3, Mannose-Binding Protein-A Mutant (Qpdwgh) Complexed With
N-Acetyl-D-Galactosamine
Length = 154
Score = 26.2 bits (56), Expect = 9.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 103 EILLDNMEV----LKSIRSVLKRMRAFSDSVRSGKRLGYTN 139
E+ L NME LKS + ++ AFS +SGK+ TN
Sbjct: 3 EVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTN 43
>pdb|1AFB|1 Chain 1, C-Type Lectin, Calcium-Binding Protein Mol_id: 1;
Molecule: Mannose-Binding Protein-A; Chain: 1, 2, 3;
Fragment: Clostripain Fragment (Residues 73 - 226);
Synonym: Cl-Qpdwg; Engineered: Yes; Mutation: E185q,
N187d, H189w, G190y, S191g, Ins(H192, G193, L194, G195,
G196); Heterogen: N-Acetyl-D-Galactosamine;
Other_details: Ph 8.0, Data Collected At 100k, 20%
2-Methyl,2-4 Pentanediol (Cryoprotectant)
pdb|1AFB|2 Chain 2, C-Type Lectin, Calcium-Binding Protein Mol_id: 1;
Molecule: Mannose-Binding Protein-A; Chain: 1, 2, 3;
Fragment: Clostripain Fragment (Residues 73 - 226);
Synonym: Cl-Qpdwg; Engineered: Yes; Mutation: E185q,
N187d, H189w, G190y, S191g, Ins(H192, G193, L194, G195,
G196); Heterogen: N-Acetyl-D-Galactosamine;
Other_details: Ph 8.0, Data Collected At 100k, 20%
2-Methyl,2-4 Pentanediol (Cryoprotectant)
pdb|1AFB|3 Chain 3, C-Type Lectin, Calcium-Binding Protein Mol_id: 1;
Molecule: Mannose-Binding Protein-A; Chain: 1, 2, 3;
Fragment: Clostripain Fragment (Residues 73 - 226);
Synonym: Cl-Qpdwg; Engineered: Yes; Mutation: E185q,
N187d, H189w, G190y, S191g, Ins(H192, G193, L194, G195,
G196); Heterogen: N-Acetyl-D-Galactosamine;
Other_details: Ph 8.0, Data Collected At 100k, 20%
2-Methyl,2-4 Pentanediol (Cryoprotectant)
pdb|1AFA|1 Chain 1, C-Type Lectin, Calcium-Binding Protein Mol_id: 1;
Molecule: Mannose-Binding Protein-A; Chain: 1, 2, 3;
Fragment: Clostripain Fragment (Residues 73 - 226);
Synonym: Cl-Qpdwg; Engineered: Yes; Mutation: E185q,
N187d, H189w, G190y, S191g, Ins(H192, G193, L194, G195,
G196); Heterogen: Beta-Methyl-D-Galactoside;
Other_details: Ph 8.0, Data Collected At 100k, 20%
2-Methyl,2-4 Pentanediol (Cryoprotectant)
pdb|1AFA|2 Chain 2, C-Type Lectin, Calcium-Binding Protein Mol_id: 1;
Molecule: Mannose-Binding Protein-A; Chain: 1, 2, 3;
Fragment: Clostripain Fragment (Residues 73 - 226);
Synonym: Cl-Qpdwg; Engineered: Yes; Mutation: E185q,
N187d, H189w, G190y, S191g, Ins(H192, G193, L194, G195,
G196); Heterogen: Beta-Methyl-D-Galactoside;
Other_details: Ph 8.0, Data Collected At 100k, 20%
2-Methyl,2-4 Pentanediol (Cryoprotectant)
pdb|1AFA|3 Chain 3, C-Type Lectin, Calcium-Binding Protein Mol_id: 1;
Molecule: Mannose-Binding Protein-A; Chain: 1, 2, 3;
Fragment: Clostripain Fragment (Residues 73 - 226);
Synonym: Cl-Qpdwg; Engineered: Yes; Mutation: E185q,
N187d, H189w, G190y, S191g, Ins(H192, G193, L194, G195,
G196); Heterogen: Beta-Methyl-D-Galactoside;
Other_details: Ph 8.0, Data Collected At 100k, 20%
2-Methyl,2-4 Pentanediol (Cryoprotectant)
pdb|1AFD|1 Chain 1, C-Type Lectin, Calcium-Binding Protein Mol_id: 1;
Molecule: Mannose-Binding Protein-A; Chain: 1, 2, 3;
Fragment: Clostripain Fragment (Residues 73 - 226);
Synonym: Cl-Qpdwg; Engineered: Yes; Mutation: E185q,
N187d, H189w, G190y, S191g, Ins(H192, G193, L194, G195,
G196); Other_details: Ph 8.0, Data Collected At 100k,
20% 2-Methyl,2-4 Pentanediol (Cryoprotectant)
pdb|1AFD|2 Chain 2, C-Type Lectin, Calcium-Binding Protein Mol_id: 1;
Molecule: Mannose-Binding Protein-A; Chain: 1, 2, 3;
Fragment: Clostripain Fragment (Residues 73 - 226);
Synonym: Cl-Qpdwg; Engineered: Yes; Mutation: E185q,
N187d, H189w, G190y, S191g, Ins(H192, G193, L194, G195,
G196); Other_details: Ph 8.0, Data Collected At 100k,
20% 2-Methyl,2-4 Pentanediol (Cryoprotectant)
pdb|1AFD|3 Chain 3, C-Type Lectin, Calcium-Binding Protein Mol_id: 1;
Molecule: Mannose-Binding Protein-A; Chain: 1, 2, 3;
Fragment: Clostripain Fragment (Residues 73 - 226);
Synonym: Cl-Qpdwg; Engineered: Yes; Mutation: E185q,
N187d, H189w, G190y, S191g, Ins(H192, G193, L194, G195,
G196); Other_details: Ph 8.0, Data Collected At 100k,
20% 2-Methyl,2-4 Pentanediol (Cryoprotectant)
Length = 154
Score = 26.2 bits (56), Expect = 9.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 103 EILLDNMEV----LKSIRSVLKRMRAFSDSVRSGKRLGYTN 139
E+ L NME LKS + ++ AFS +SGK+ TN
Sbjct: 3 EVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTN 43
>pdb|1KX0|A Chain A, Rat Mannose Protein A (H189v I207v) Complexed With
Man-A13- Man
pdb|1KX0|B Chain B, Rat Mannose Protein A (H189v I207v) Complexed With
Man-A13- Man
pdb|1KX0|C Chain C, Rat Mannose Protein A (H189v I207v) Complexed With
Man-A13- Man
Length = 149
Score = 26.2 bits (56), Expect = 9.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 103 EILLDNMEV----LKSIRSVLKRMRAFSDSVRSGKRLGYTN 139
E+ L NME LKS + ++ AFS +SGK+ TN
Sbjct: 3 EVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTN 43
>pdb|1FIH|A Chain A, N-Acetylgalactosamine Binding Mutant Of Mannose-Binding
Protein A (Qpdwg-Hdrpy), Complex With
N-Acetylgalactosamine
pdb|1FIH|B Chain B, N-Acetylgalactosamine Binding Mutant Of Mannose-Binding
Protein A (Qpdwg-Hdrpy), Complex With
N-Acetylgalactosamine
pdb|1FIH|C Chain C, N-Acetylgalactosamine Binding Mutant Of Mannose-Binding
Protein A (Qpdwg-Hdrpy), Complex With
N-Acetylgalactosamine
pdb|1FIF|A Chain A, N-Acetylgalactosamine-Selective Mutant Of Mannose-Binding
Protein-A (Qpdwg-Hdrpy)
pdb|1FIF|B Chain B, N-Acetylgalactosamine-Selective Mutant Of Mannose-Binding
Protein-A (Qpdwg-Hdrpy)
pdb|1FIF|C Chain C, N-Acetylgalactosamine-Selective Mutant Of Mannose-Binding
Protein-A (Qpdwg-Hdrpy)
Length = 154
Score = 26.2 bits (56), Expect = 9.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 103 EILLDNMEV----LKSIRSVLKRMRAFSDSVRSGKRLGYTN 139
E+ L NME LKS + ++ AFS +SGK+ TN
Sbjct: 3 EVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTN 43
>pdb|1KWT|A Chain A, Rat Mannose Binding Protein A (Native, Mpd)
pdb|1KWT|B Chain B, Rat Mannose Binding Protein A (Native, Mpd)
pdb|1KWT|C Chain C, Rat Mannose Binding Protein A (Native, Mpd)
pdb|1KWU|A Chain A, Rat Mannose Binding Protein A Complexed With A-Me-Man
pdb|1KWU|B Chain B, Rat Mannose Binding Protein A Complexed With A-Me-Man
pdb|1KWU|C Chain C, Rat Mannose Binding Protein A Complexed With A-Me-Man
pdb|1KWV|A Chain A, Rat Mannose Binding Protein A Complexed With A-Me-Glcnac
pdb|1KWV|B Chain B, Rat Mannose Binding Protein A Complexed With A-Me-Glcnac
pdb|1KWV|C Chain C, Rat Mannose Binding Protein A Complexed With A-Me-Glcnac
pdb|1KWW|A Chain A, Rat Mannose Protein A Complexed With A-Me-Fuc.
pdb|1KWW|B Chain B, Rat Mannose Protein A Complexed With A-Me-Fuc.
pdb|1KWW|C Chain C, Rat Mannose Protein A Complexed With A-Me-Fuc.
pdb|1KWX|A Chain A, Rat Mannose Protein A Complexed With B-Me-Fuc.
pdb|1KWX|B Chain B, Rat Mannose Protein A Complexed With B-Me-Fuc.
pdb|1KWX|C Chain C, Rat Mannose Protein A Complexed With B-Me-Fuc.
pdb|1KWY|A Chain A, Rat Mannose Protein A Complexed With Man-A13-Man.
pdb|1KWY|B Chain B, Rat Mannose Protein A Complexed With Man-A13-Man.
pdb|1KWY|C Chain C, Rat Mannose Protein A Complexed With Man-A13-Man.
pdb|1KX1|A Chain A, Rat Mannose Protein A Complexed With Man6-Glcnac2-Asn
pdb|1KX1|B Chain B, Rat Mannose Protein A Complexed With Man6-Glcnac2-Asn
pdb|1KX1|C Chain C, Rat Mannose Protein A Complexed With Man6-Glcnac2-Asn
pdb|1KX1|D Chain D, Rat Mannose Protein A Complexed With Man6-Glcnac2-Asn
pdb|1KX1|E Chain E, Rat Mannose Protein A Complexed With Man6-Glcnac2-Asn
pdb|1KX1|F Chain F, Rat Mannose Protein A Complexed With Man6-Glcnac2-Asn
pdb|1RTM|1 Chain 1, Mannose-Binding Protein A (Clostripain Fragment)
(Cl-Mbp-A)
pdb|1RTM|2 Chain 2, Mannose-Binding Protein A (Clostripain Fragment)
(Cl-Mbp-A)
pdb|1RTM|3 Chain 3, Mannose-Binding Protein A (Clostripain Fragment)
(Cl-Mbp-A)
Length = 149
Score = 26.2 bits (56), Expect = 9.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 103 EILLDNMEV----LKSIRSVLKRMRAFSDSVRSGKRLGYTN 139
E+ L NME LKS + ++ AFS +SGK+ TN
Sbjct: 3 EVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTN 43
>pdb|1KWZ|A Chain A, Rat Mannose Protein A (H189v) Complexed With Man-A13-Man
pdb|1KWZ|B Chain B, Rat Mannose Protein A (H189v) Complexed With Man-A13-Man
pdb|1KWZ|C Chain C, Rat Mannose Protein A (H189v) Complexed With Man-A13-Man
Length = 149
Score = 26.2 bits (56), Expect = 9.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 103 EILLDNMEV----LKSIRSVLKRMRAFSDSVRSGKRLGYTN 139
E+ L NME LKS + ++ AFS +SGK+ TN
Sbjct: 3 EVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTN 43
>pdb|3KMB|1 Chain 1, Complex Of 3'-Sulfo-Lewis-X With A Selectin-Like Mutant Of
Mannose-Binding Protein A
pdb|3KMB|2 Chain 2, Complex Of 3'-Sulfo-Lewis-X With A Selectin-Like Mutant Of
Mannose-Binding Protein A
pdb|3KMB|3 Chain 3, Complex Of 3'-Sulfo-Lewis-X With A Selectin-Like Mutant Of
Mannose-Binding Protein A
pdb|2KMB|1 Chain 1, Complex Of 3'-Neuac-Lewis-X With A Selectin-Like Mutant Of
Mannose-Binding Protein A
pdb|2KMB|2 Chain 2, Complex Of 3'-Neuac-Lewis-X With A Selectin-Like Mutant Of
Mannose-Binding Protein A
pdb|2KMB|3 Chain 3, Complex Of 3'-Neuac-Lewis-X With A Selectin-Like Mutant Of
Mannose-Binding Protein A
pdb|4KMB|1 Chain 1, Complex Of 4'-Sulfo-Lewis-X With A Selectin-Like Mutant Of
Mannose-Binding Protein A
pdb|4KMB|2 Chain 2, Complex Of 4'-Sulfo-Lewis-X With A Selectin-Like Mutant Of
Mannose-Binding Protein A
pdb|4KMB|3 Chain 3, Complex Of 4'-Sulfo-Lewis-X With A Selectin-Like Mutant Of
Mannose-Binding Protein A
pdb|1KMB|1 Chain 1, Selectin-Like Mutant Of Mannose-Binding Protein A
pdb|1KMB|2 Chain 2, Selectin-Like Mutant Of Mannose-Binding Protein A
pdb|1KMB|3 Chain 3, Selectin-Like Mutant Of Mannose-Binding Protein A
Length = 149
Score = 26.2 bits (56), Expect = 9.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 103 EILLDNMEV----LKSIRSVLKRMRAFSDSVRSGKRLGYTN 139
E+ L NME LKS + ++ AFS +SGK+ TN
Sbjct: 3 EVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTN 43
>pdb|1BCJ|1 Chain 1, Mannose-Binding Protein-A Mutant (Qpdwghv) Complexed With
N-Acetyl-D-Galactosamine
pdb|1BCJ|2 Chain 2, Mannose-Binding Protein-A Mutant (Qpdwghv) Complexed With
N-Acetyl-D-Galactosamine
pdb|1BCJ|3 Chain 3, Mannose-Binding Protein-A Mutant (Qpdwghv) Complexed With
N-Acetyl-D-Galactosamine
Length = 154
Score = 26.2 bits (56), Expect = 9.9
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 4/41 (9%)
Query: 103 EILLDNMEV----LKSIRSVLKRMRAFSDSVRSGKRLGYTN 139
E+ L NME LKS + ++ AFS +SGK+ TN
Sbjct: 3 EVKLANMEAEINTLKSKLELTNKLHAFSMGKKSGKKFFVTN 43
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.321 0.138 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,118,527
Number of Sequences: 13198
Number of extensions: 129198
Number of successful extensions: 279
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 263
Number of HSP's gapped (non-prelim): 16
length of query: 545
length of database: 2,899,336
effective HSP length: 93
effective length of query: 452
effective length of database: 1,671,922
effective search space: 755708744
effective search space used: 755708744
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)