BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644760|ref|NP_206930.1| hypothetical protein
[Helicobacter pylori 26695]
(286 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyos... 35 0.010
pdb|1MH3|A Chain A, Maltose Binding-A1 Homeodomain Protein ... 35 0.013
pdb|1JI5|A Chain A, Dlp-1 From Bacillus Anthracis >gi|21730... 30 0.24
pdb|1JI4|A Chain A, Nap Protein From Helicobacter Pylori >g... 30 0.41
pdb|1B6A| Human Methionine Aminopeptidase 2 Complexed Wit... 30 0.41
pdb|1BN5| Human Methionine Aminopeptidase 2 >gi|5821858|p... 30 0.41
pdb|1HLO|A Chain A, The Crystal Structure Of An Intact Huma... 29 0.54
pdb|2TMA|A Chain A, Tropomyosin >gi|230768|pdb|2TMA|B Chain... 29 0.71
pdb|1QGH|A Chain A, The X-Ray Structure Of The Unusual Dode... 29 0.71
pdb|1BPX|A Chain A, Human Dna Polymerase Beta Complexed Wit... 28 1.6
pdb|1MIU|A Chain A, Structure Of A Brca2-Dss1 Complex 28 1.6
pdb|1IYJ|B Chain B, Structure Of A Brca2-Dss1 Complex >gi|2... 27 2.7
pdb|1IRU|C Chain C, Crystal Structure Of The Mammalian 20s ... 27 2.7
pdb|7CEI|B Chain B, The Endonuclease Domain Of Colicin E7 I... 27 3.5
pdb|1HYR|B Chain B, Crystal Structure Of Human Mica In Comp... 26 4.6
pdb|1KIL|E Chain E, Three-Dimensional Structure Of The Comp... 26 4.6
pdb|1KCG|B Chain B, Nkg2d In Complex With Ulbp3 >gi|1815864... 26 4.6
pdb|1E7L|A Chain A, Endonuclease Vii (Endovii) N62d Mutant ... 26 6.0
pdb|1EN7|A Chain A, Endonuclease Vii (Endovii) From Phage T... 26 6.0
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|V Chain V, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 1184
Score = 35.0 bits (79), Expect = 0.010
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 164 VRISQKEKARKVDAIVLKKME-EQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNA 222
VR+ ++EK+R+ + +K+E E ++ + A + EL++ E + A
Sbjct: 1046 VRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQLAKKE---EELQAALA 1102
Query: 223 SNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFE 275
D S N NALK+ E S +E +K +K EKQ++ L +E E
Sbjct: 1103 RLEDETSQKN-NALKKIRELESHISDLQEDLESEKAARNKAEKQKRDLSEELE 1154
Score = 30.0 bits (66), Expect = 0.32
Identities = 24/126 (19%), Positives = 59/126 (46%), Gaps = 1/126 (0%)
Query: 160 LISMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRT 219
L+ + R ++ +A+ + K+ +++AE + K QK + E + + + ++
Sbjct: 849 LLKVTRQEEEMQAKDEELQRTKERQQKAEAELKELEQKHTQLCEEKNLLQEKLQAETELY 908
Query: 220 QNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQIS 279
A + L+E E EA ++E++ ++ + KK+ QQQ L E + +
Sbjct: 909 AEAEEMRVRLAAKKQELEEILH-EMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEE 967
Query: 280 DSSKSE 285
++++ +
Sbjct: 968 EAARQK 973
Score = 28.5 bits (62), Expect = 0.92
Identities = 27/122 (22%), Positives = 52/122 (42%), Gaps = 3/122 (2%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
++EKA+ + + K +E + + +++S ELE E SS Q A
Sbjct: 1023 EEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQ 1082
Query: 228 NSMTNANALKETASKEPEASSKKEKKSKKKRRLSK---KEKQQQALQQEFEKQISDSSKS 284
+ A K+ + + +++ S+K L K E LQ++ E + + +K+
Sbjct: 1083 IAELKAQLAKKEEELQAALARLEDETSQKNNALKKIRELESHISDLQEDLESEKAARNKA 1142
Query: 285 EK 286
EK
Sbjct: 1143 EK 1144
>pdb|1MH3|A Chain A, Maltose Binding-A1 Homeodomain Protein Chimera, Crystal
Form I
pdb|1MH4|A Chain A, Maltose Binding-A1 Homeodomain Protein Chimera, Crystal
Form Ii
Length = 421
Score = 34.7 bits (78), Expect = 0.013
Identities = 31/118 (26%), Positives = 57/118 (48%), Gaps = 8/118 (6%)
Query: 159 YLISMVRISQKEKARKVDAIVLKKMEEQAEKDTK--AAFQKRSSGELESHTDSPEFISSS 216
YL++ + K + + A+ LK EE+ KD + A + GE+ + +
Sbjct: 283 YLLTDEGLEAVNKDKPLGAVALKSYEEELAKDPRIAATMENAQKGEIMPNIPQMSAFWYA 342
Query: 217 KRTQ--NASNSDLNSMTNANALKETASK---EPEASSKKEKKSKKKRRLSKKEKQQQA 269
RT NA+ S ++ A A +TA+ P+A + E+ ++K+ L+ KEK++ A
Sbjct: 343 VRTAVINAA-SGRQTVDAALAAAQTAAAAAISPQARAFLEQVFRRKQSLNSKEKEEVA 399
>pdb|1JI5|A Chain A, Dlp-1 From Bacillus Anthracis
pdb|1JI5|B Chain B, Dlp-1 From Bacillus Anthracis
pdb|1JI5|C Chain C, Dlp-1 From Bacillus Anthracis
pdb|1JI5|D Chain D, Dlp-1 From Bacillus Anthracis
Length = 142
Score = 30.4 bits (67), Expect = 0.24
Identities = 24/98 (24%), Positives = 44/98 (44%), Gaps = 9/98 (9%)
Query: 133 FNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKVDAIVLKKMEEQAEKDT- 191
F+W KG F LHE+F ++Y ++ + E+ + + M+E E +
Sbjct: 23 FHWYVKGPQFFTLHEKFEELYTESATHIDEIA-----ERILAIGGKPVATMKEYLEISSI 77
Query: 192 -KAAFQKRSSGELESHTDSPE--FISSSKRTQNASNSD 226
+AA+ + + G +E+ E + K + A NSD
Sbjct: 78 QEAAYGETAEGMVEAIMKDYEMMLVELKKGMEIAQNSD 115
>pdb|1JI4|A Chain A, Nap Protein From Helicobacter Pylori
pdb|1JI4|B Chain B, Nap Protein From Helicobacter Pylori
pdb|1JI4|C Chain C, Nap Protein From Helicobacter Pylori
pdb|1JI4|D Chain D, Nap Protein From Helicobacter Pylori
pdb|1JI4|E Chain E, Nap Protein From Helicobacter Pylori
pdb|1JI4|F Chain F, Nap Protein From Helicobacter Pylori
pdb|1JI4|G Chain G, Nap Protein From Helicobacter Pylori
pdb|1JI4|H Chain H, Nap Protein From Helicobacter Pylori
pdb|1JI4|I Chain I, Nap Protein From Helicobacter Pylori
pdb|1JI4|J Chain J, Nap Protein From Helicobacter Pylori
pdb|1JI4|K Chain K, Nap Protein From Helicobacter Pylori
pdb|1JI4|L Chain L, Nap Protein From Helicobacter Pylori
Length = 144
Score = 29.6 bits (65), Expect = 0.41
Identities = 20/73 (27%), Positives = 36/73 (48%), Gaps = 14/73 (19%)
Query: 133 FNWLYKGSDFGALH-------EQFGDMYDGYIKYLISMVRISQKEKARKVDAIVLKKMEE 185
F+W KG+DF +H E+F DM+D + +V++ +AI L +++E
Sbjct: 24 FHWNVKGTDFFNVHKATEEIYEEFADMFDDLAE---RIVQLGHHPLVTLSEAIKLTRVKE 80
Query: 186 QAEKDTKAAFQKR 198
+TK +F +
Sbjct: 81 ----ETKTSFHSK 89
>pdb|1B6A| Human Methionine Aminopeptidase 2 Complexed With Tnp-470
Length = 478
Score = 29.6 bits (65), Expect = 0.41
Identities = 19/71 (26%), Positives = 36/71 (49%), Gaps = 6/71 (8%)
Query: 222 ASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRR------LSKKEKQQQALQQEFE 275
AS S LN + + +E A+ E ++KK+++ KKK + + +K+ A E
Sbjct: 9 ASGSHLNGDLDPDDREEGAASTAEEAAKKKRRKKKKSKGPSAAGEQEPDKESGASVDEVA 68
Query: 276 KQISDSSKSEK 286
+Q+ S+ +K
Sbjct: 69 RQLERSALEDK 79
Score = 25.4 bits (54), Expect = 7.8
Identities = 23/84 (27%), Positives = 37/84 (43%), Gaps = 17/84 (20%)
Query: 184 EEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKE 243
EE A+K K +K+S G + P+ + AS ++ +AL++ E
Sbjct: 32 EEAAKK--KRRKKKKSKGPSAAGEQEPD------KESGASVDEVARQLERSALEDKERDE 83
Query: 244 PE---------ASSKKEKKSKKKR 258
+ A+ KK+KK KKKR
Sbjct: 84 DDEDGDGDGDGATGKKKKKKKKKR 107
>pdb|1BN5| Human Methionine Aminopeptidase 2
pdb|1BOA| Human Methionine Aminopeptidase 2 Complexed With Angiogenesis
Inhibitor Fumagillin
Length = 478
Score = 29.6 bits (65), Expect = 0.41
Identities = 19/71 (26%), Positives = 36/71 (49%), Gaps = 6/71 (8%)
Query: 222 ASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRR------LSKKEKQQQALQQEFE 275
AS S LN + + +E A+ E ++KK+++ KKK + + +K+ A E
Sbjct: 9 ASGSHLNGDLDPDDREEGAASTAEEAAKKKRRKKKKSKGPSAAGEQEPDKESGASVDEVA 68
Query: 276 KQISDSSKSEK 286
+Q+ S+ +K
Sbjct: 69 RQLERSALEDK 79
Score = 25.4 bits (54), Expect = 7.8
Identities = 23/84 (27%), Positives = 37/84 (43%), Gaps = 17/84 (20%)
Query: 184 EEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKE 243
EE A+K K +K+S G + P+ + AS ++ +AL++ E
Sbjct: 32 EEAAKK--KRRKKKKSKGPSAAGEQEPD------KESGASVDEVARQLERSALEDKERDE 83
Query: 244 PE---------ASSKKEKKSKKKR 258
+ A+ KK+KK KKKR
Sbjct: 84 DDEDGDGDGDGATGKKKKKKKKKR 107
>pdb|1HLO|A Chain A, The Crystal Structure Of An Intact Human Max-Dna Complex:
New Insights Into Mechanisms Of Transcriptional Control
pdb|1HLO|B Chain B, The Crystal Structure Of An Intact Human Max-Dna Complex:
New Insights Into Mechanisms Of Transcriptional Control
Length = 150
Score = 29.3 bits (64), Expect = 0.54
Identities = 29/117 (24%), Positives = 51/117 (42%), Gaps = 17/117 (14%)
Query: 144 ALHEQFGDMYDGYIKYLISMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGEL 203
A Q D YI+Y+ +K + D LK+ E+ +A + RSS +L
Sbjct: 48 ASRAQILDKATEYIQYM------RRKNHTHQQDIDDLKRQNALLEQQVRALEKARSSAQL 101
Query: 204 ESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRL 260
+++ S S + NA S +++ + ++ EPE E +S+KK R+
Sbjct: 102 QTNYPS----SDNSLYTNAKGSTISAFDGGS--DSSSESEPE-----EPQSRKKLRM 147
>pdb|2TMA|A Chain A, Tropomyosin
pdb|2TMA|B Chain B, Tropomyosin
Length = 284
Score = 28.9 bits (63), Expect = 0.71
Identities = 30/125 (24%), Positives = 53/125 (42%), Gaps = 8/125 (6%)
Query: 163 MVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNA 222
M I +K + K+D EQAE D KAA + S +LE E +S K+ +
Sbjct: 1 MDAIKKKMQMLKLDKENALDRAEQAEADKKAAEDR--SKQLED-----ELVSLQKKLKGT 53
Query: 223 SNS-DLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDS 281
+ D S +A ++ E +A+ + + RR+ E++ Q+ +
Sbjct: 54 EDELDKYSEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKL 113
Query: 282 SKSEK 286
++EK
Sbjct: 114 EEAEK 118
>pdb|1QGH|A Chain A, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|B Chain B, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|C Chain C, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|D Chain D, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|E Chain E, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|F Chain F, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|G Chain G, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|H Chain H, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|I Chain I, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|J Chain J, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|K Chain K, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site.
pdb|1QGH|L Chain L, The X-Ray Structure Of The Unusual Dodecameric Ferritin
From Listeria Innocua, Reveals A Novel Intersubunit Iron
Binding Site
Length = 156
Score = 28.9 bits (63), Expect = 0.71
Identities = 12/46 (26%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 112 DREKFYKHVLKDLGT-ELSLPLFNWLYKGSDFGALHEQFGDMYDGY 156
D ++F H + +L + + +W +G +F LHE+ D+Y +
Sbjct: 8 DTKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHEKMDDLYSEF 53
>pdb|1BPX|A Chain A, Human Dna Polymerase Beta Complexed With Gapped Dna
pdb|1BPZ|A Chain A, Human Dna Polymerase Beta Complexed With Nicked Dna
pdb|9ICW|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Native Structure
pdb|9ICX|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna (Non Gapped Dna Only)
pdb|9ICV|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(0.1 Millimolar) And Zncl2 (0.2 Millimolar)
pdb|8ICK|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar), Mgcl2 (5 Millimolar), And Mncl2 (5
Millimolar)
pdb|8ICO|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of
Azt-Tp (1 Millimolar) And Mncl2 (5 Millimolar)
pdb|1ZQA|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Kcl
(150 Millimolar) At Ph 7.5
pdb|1ZQI|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Kcl
(150 Millimolar)
pdb|9ICK|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of
Artificial Mother Liquor
pdb|8ICN|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Atp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|9ICL|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of
Pyrophosphate (1 Millimolar) And Mncl2 (5 Millimolar)
pdb|7ICT|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Zncl2
(0.01 Millimolar) And Mgcl2 (1 Millimolar)
pdb|8ICI|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dgtp
(1 Millimolar) And Mgcl2 (5 Millimolar)
pdb|1ZQP|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Kcl
(75 Millimolar) And Nacl (75 Millimolar)
pdb|7ICE|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Cacl2
(0.1 Millimolar)
pdb|7ICI|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Crcl3
(0.1 Millimolar)
pdb|7ICN|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Nicl2
(0.1 Millimolar)
pdb|7ICS|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Zncl2
(0.001 Millimolar)
pdb|7ICV|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Mncl2
(0.1 Millimolar) And In The Absence Of Nacl
pdb|8ICC|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna (No 5'-Phosphate)
pdb|9ICH|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dgtp
(1 Millimolar) And Zncl2 (1 Millimolar)
pdb|8ICR|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|8ICS|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dctp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|9ICQ|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Datp (1
Millimolar) And Mncl2 (5 Millimolar)
pdb|9ICS|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Ddctp
(10 Millimolar) And Mncl2 (10 Millimolar)
pdb|8ICP|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|9ICU|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Dttp (1
Millimolar) And Mncl2 (5 Millimolar)
pdb|7ICQ|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Zncl2
(0.1 Millimolar) (Four-Day Soak)
pdb|8ICF|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(10 Millimolar) And Mgcl2 (50 Millimolar)
pdb|8ICM|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar), Mncl2 (5 Millimolar), And Ammonium
Sulfate (75 Millimolar)
pdb|1ZQF|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Cscl
(150 Millimolar)
pdb|7ICH|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Cocl2
(0.1 Millimolar)
pdb|7ICK|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Mgcl2
(0.1 Millimolar)
pdb|9ICM|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Double Stranded Dna (No 5'-Phosphate)
pdb|9ICO|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Dttp (1
Millimolar) And Mgcl2 (5 Millimolar)
pdb|9ICG|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dctp
(1 Millimolar) And Zncl2 (1 Millimolar)
pdb|8ICU|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Ddatp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|8ICX|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dttp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|9ICF|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Zncl2 (1 Millimolar)
pdb|9ICR|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Dctp (1
Millimolar) And Mncl2 (5 Millimolar)
pdb|9ICT|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Dgtp (1
Millimolar) And Mncl2 (5 Millimolar)
pdb|8ICA|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Cacl2 (5 Millimolar)
pdb|9ICN|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Ddctp
(20 Millimolar) And Mgcl2 (20 Millimolar)
pdb|7ICP|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Zncl2
(0.01 Millimolar)
pdb|7ICR|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Zncl2
(1 Millimolar)
pdb|9ICA|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of
Datp(Alpha)s (1 Millimolar) And Mncl2 (5 Millimolar)
pdb|9ICY|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna (Non Gapped Dna Only)
pdb|1ZQN|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Bacl2
(15 Millimolar) And Nacl (15 Millimolar)
pdb|7ICG|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Cdcl2
(0.01 Millimolar)
pdb|7ICM|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Mncl2
(1.0 Millimolar)
pdb|8ICQ|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Of
Datp (0.1 Millimolar) And Mncl2 (0.5 Millimolar)
pdb|8ICL|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Nicl2 (5 Millimolar)
pdb|8ICT|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dctp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|8ICY|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dttp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|9ICC|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Crcl3 (5 Millimolar)
pdb|7ICF|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Cdcl2
(0.1 Millimolar) (Four-Day Soak)
pdb|9ICI|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dttp
(1 Millimolar) And Zncl2 (1 Millimolar)
pdb|8ICZ|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Of
Datp (1 Millimolar), Mncl2 (5 Millimolar), And Lithium
Sulfate (75 Millimolar)
pdb|9ICJ|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna
pdb|1ZQG|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of A
Sodium-Free Artificial Mother Liquor At Ph 6.5
pdb|1ZQH|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of A
Sodium-Free Artificial Mother Liquor At Ph 7.5
pdb|7ICL|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Mncl2
(0.1 Millimolar)
pdb|8ICB|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of
Artificial Mother Liquor
pdb|9ICP|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of
Pyrophosphate (1 Millimolar) And Mgcl2 (5 Millimolar)
pdb|8ICE|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Cdcl2 (1 Millimolar)
pdb|9ICB|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Cocl2 (5 Millimolar)
pdb|8ICV|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dgtp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|8ICJ|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dttp
(1 Millimolar) And Mgcl2 (5 Millimolar)
pdb|1ZQB|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Bacl2
(150 Millimolar)
pdb|1ZQC|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Cacl2
(15 Millimolar)
pdb|1ZQM|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Mncl2
(15 Millimolar)
pdb|1ZQK|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Kcl
(75 Millimolar) And Mgcl2 (75 Millimolar)
pdb|1ZQO|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Cacl2
(15 Millimolar) And Nacl (15 Millimolar)
pdb|8ICW|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dttp
(1 Millimolar) And Mncl2 (5 Millimolar)
pdb|1ZQQ|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Mncl2
(15 Millimolar) And Nacl (15 Millimolar)
pdb|7ICO|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Zncl2
(0.1 Millimolar)
pdb|7ICU|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Cdcl2
(0.1 Millimolar)
pdb|1ZQL|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Mncl2
(15 Millimolar) And Mgcl2 (15 Millimolar)
pdb|1ZQJ|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Cacl2
(15 Millimolar) And Mgcl2 (15 Millimolar)
pdb|1ZQS|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Tlcl
(0.5 Millimolar)
pdb|8ICG|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Mgcl2 (5 Millimolar)
pdb|8ICH|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Dctp
(1 Millimolar) And Mgcl2 (5 Millimolar)
pdb|9ICE|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(1 Millimolar) And Cucl2 (0.1 Millimolar)
pdb|1ZQT|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Datp
(0.01 Millimolar) And Zncl2 (0.02 Millimolar)
pdb|7ICJ|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Six Base Pairs Of Dna; Soaked In The Presence Of Cucl2
(0.1 Millimolar)
pdb|1ZQD|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Cacl2
(150 Millimolar)
pdb|1ZQR|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Nicl2
(15 Millimolar)
pdb|1ZQE|A Chain A, Dna Polymerase Beta (Pol B) (E.C.2.7.7.7) Complexed With
Seven Base Pairs Of Dna; Soaked In The Presence Of Crcl3
(Saturated Solution)
pdb|1BPY|A Chain A, Human Dna Polymerase Beta Complexed With Gapped Dna And
Ddctp
Length = 335
Score = 27.7 bits (60), Expect = 1.6
Identities = 29/136 (21%), Positives = 58/136 (42%), Gaps = 16/136 (11%)
Query: 136 LYKGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKVDAIV--LKKMEEQAEKDTKA 193
L K D H++ G Y G + RI ++E + D ++ +KK++ +
Sbjct: 125 LRKNEDKLNHHQRIGLKYFGDFEK-----RIPREEMLQMQDIVLNEVKKVDSEYIATVCG 179
Query: 194 AFQK--RSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEP------- 244
+F++ SSG+++ P F S S + + + + + + +T SK
Sbjct: 180 SFRRGAESSGDMDVLLTHPSFTSESTKQPKLLHQVVEQLQKVHFITDTLSKGETKFMGVC 239
Query: 245 EASSKKEKKSKKKRRL 260
+ SK ++K RR+
Sbjct: 240 QLPSKNDEKEYPHRRI 255
>pdb|1MIU|A Chain A, Structure Of A Brca2-Dss1 Complex
Length = 738
Score = 27.7 bits (60), Expect = 1.6
Identities = 31/160 (19%), Positives = 64/160 (39%), Gaps = 7/160 (4%)
Query: 130 LPLFNWLYKGSDFGALHEQFGDMYD-GYIKYLISMVRISQKEKARKVDAIVLKKMEEQAE 188
LPL + G + G + +Y +++ +S + I + E+ + +A+ + E +
Sbjct: 347 LPLSSLFSDGGNVGCVDIIVQRVYPLQWVEKTVSGLYIFRSEREEEKEAL---RFAEAQQ 403
Query: 189 KDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPEAS- 247
K +A F K + + D+ + S+ L A + AS
Sbjct: 404 KKLEALFTKVHTEFKDHEEDTTQRCVLSRTLTRQQVHALQDGAELYAAVQYASDPDHLEA 463
Query: 248 --SKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSE 285
S+++ ++ R +K+Q +Q EF K + + K E
Sbjct: 464 CFSEEQLRALNNYRQMLNDKKQARIQSEFRKALESAEKEE 503
>pdb|1IYJ|B Chain B, Structure Of A Brca2-Dss1 Complex
pdb|1IYJ|D Chain D, Structure Of A Brca2-Dss1 Complex
Length = 817
Score = 26.9 bits (58), Expect = 2.7
Identities = 34/161 (21%), Positives = 65/161 (40%), Gaps = 9/161 (5%)
Query: 130 LPLFNWLYKGSDFGALHEQFGDMYD-GYIKYLISMVRISQKEKARKVDAIVLKKMEEQAE 188
LPL + G + G + +Y +++ +S I + E+ + +A+ + E +
Sbjct: 399 LPLSSLFSDGGNVGCVDVIVQRVYPLQWVEKTVSGSYIFRNEREEEKEAL---RFAEAQQ 455
Query: 189 KDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPE--- 245
K +A F K + E D + S+ L A + AS +PE
Sbjct: 456 KKLEALFTKVHTELKEHEEDIAQRRVLSRALTRQQVHALQDGAELYAAVQDAS-DPEHLE 514
Query: 246 -ASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSE 285
S+++ ++ R +K+Q +Q EF K + + K E
Sbjct: 515 TCFSEEQLRALNNYRQMLSDKKQARIQSEFRKALEAAEKEE 555
>pdb|1IRU|C Chain C, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
pdb|1IRU|Q Chain Q, Crystal Structure Of The Mammalian 20s Proteasome At 2.75
A Resolution
Length = 261
Score = 26.9 bits (58), Expect = 2.7
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 215 SSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQ 268
S+++ + A+ + N T LK+ KE E KK ++ + K KKEK+Q+
Sbjct: 207 SAEKVEIATLTRENGKTVIRVLKQ---KEVEQLIKKHEEEEAKAEREKKEKEQK 257
>pdb|7CEI|B Chain B, The Endonuclease Domain Of Colicin E7 In Complex With Its
Inhibitor Im7 Protein
Length = 206
Score = 26.6 bits (57), Expect = 3.5
Identities = 27/107 (25%), Positives = 40/107 (37%), Gaps = 19/107 (17%)
Query: 177 AIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTN---A 233
A+ +K +E EKD KA K S ++K NA DL S A
Sbjct: 53 ALERRKQKENKEKDAKAKLDKESKRNKPGKATGKGKPVNNKWLNNAGK-DLGSPVPDRIA 111
Query: 234 NALK---------------ETASKEPEASSKKEKKSKKKRRLSKKEK 265
N L+ E SK+PE S + + + + ++ K K
Sbjct: 112 NKLRDKEFKSFDDFRKKFWEEVSKDPELSKQFSRNNNDRMKVGKAPK 158
>pdb|1HYR|B Chain B, Crystal Structure Of Human Mica In Complex With Natural
Killer Cell Receptor Nkg2d
pdb|1HYR|A Chain A, Crystal Structure Of Human Mica In Complex With Natural
Killer Cell Receptor Nkg2d
Length = 137
Score = 26.2 bits (56), Expect = 4.6
Identities = 9/21 (42%), Positives = 15/21 (70%)
Query: 71 KMSKGDLSAFGAFFKGSLESC 91
+M KGD + + + FKG +E+C
Sbjct: 104 EMQKGDCALYASSFKGYIENC 124
>pdb|1KIL|E Chain E, Three-Dimensional Structure Of The ComplexinSNARE COMPLEX
Length = 49
Score = 26.2 bits (56), Expect = 4.6
Identities = 11/38 (28%), Positives = 26/38 (67%), Gaps = 1/38 (2%)
Query: 241 SKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQI 278
SK+P+A+ K+E++ + R+ ++ K + A + E E+++
Sbjct: 2 SKDPDAAKKEEERQEALRQAEEERKAKYA-KMEAEREV 38
>pdb|1KCG|B Chain B, Nkg2d In Complex With Ulbp3
pdb|1KCG|A Chain A, Nkg2d In Complex With Ulbp3
Length = 124
Score = 26.2 bits (56), Expect = 4.6
Identities = 9/21 (42%), Positives = 15/21 (70%)
Query: 71 KMSKGDLSAFGAFFKGSLESC 91
+M KGD + + + FKG +E+C
Sbjct: 91 EMQKGDCALYASSFKGYIENC 111
>pdb|1E7L|A Chain A, Endonuclease Vii (Endovii) N62d Mutant From Phage T4
pdb|1E7L|B Chain B, Endonuclease Vii (Endovii) N62d Mutant From Phage T4
Length = 157
Score = 25.8 bits (55), Expect = 6.0
Identities = 13/29 (44%), Positives = 18/29 (61%)
Query: 253 KSKKKRRLSKKEKQQQALQQEFEKQISDS 281
KSK+ RL K+E + LQ+ FE SD+
Sbjct: 112 KSKEFSRLGKEEMMAEMLQRGFEYNESDT 140
>pdb|1EN7|A Chain A, Endonuclease Vii (Endovii) From Phage T4
pdb|1EN7|B Chain B, Endonuclease Vii (Endovii) From Phage T4
pdb|1E7D|A Chain A, Endonuclease Vii (Endovii) From Phage T4
pdb|1E7D|B Chain B, Endonuclease Vii (Endovii) From Phage T4
Length = 157
Score = 25.8 bits (55), Expect = 6.0
Identities = 13/29 (44%), Positives = 18/29 (61%)
Query: 253 KSKKKRRLSKKEKQQQALQQEFEKQISDS 281
KSK+ RL K+E + LQ+ FE SD+
Sbjct: 112 KSKEFSRLGKEEMMAEMLQRGFEYNESDT 140
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.310 0.126 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,412,255
Number of Sequences: 13198
Number of extensions: 56748
Number of successful extensions: 189
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 165
Number of HSP's gapped (non-prelim): 30
length of query: 286
length of database: 2,899,336
effective HSP length: 87
effective length of query: 199
effective length of database: 1,751,110
effective search space: 348470890
effective search space used: 348470890
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 54 (25.4 bits)