BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645967|ref|NP_208147.1| nicotinate-nucleotide
pyrophosphorylase (nadC) [Helicobacter pylori 26695]
(273 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1QPO|A Chain A, Quinolinate Phosphoribosyl Transferase ... 165 5e-42
pdb|1QAP|A Chain A, Quinolinic Acid Phosphoribosyltransfera... 155 6e-39
pdb|1ZFJ|A Chain A, Inosine Monophosphate Dehydrogenase (Im... 39 6e-04
pdb|1G5N|A Chain A, Annexin V Complex With Heparin Oligosac... 30 0.39
pdb|2RAN| Annexin V 30 0.39
pdb|1BCW| Recombinant Rat Annexin V, T72a Mutant 30 0.39
pdb|1BCY| Recombinant Rat Annexin V, T72k Mutant 30 0.39
pdb|1BCZ| Recombinant Rat Annexin V, T72s Mutant 30 0.39
pdb|1BC0| Recombinant Rat Annexin V, W185a Mutant 30 0.39
pdb|1BC1| Recombinant Rat Annexin V, Quadruple Mutant (T7... 29 0.66
pdb|1BC3| Recombinant Rat Annexin V, Triple Mutant (T72k,... 29 0.66
pdb|1SAV| Human Annexin V With Proline Substitution By Th... 27 1.9
pdb|1M43|A Chain A, Crystal Structure Of Pmii In Complex Wi... 27 2.5
pdb|1ALA| Annexin V 27 2.5
pdb|1HVD| Annexin V (Lipocortin V, Endonexin Ii, Placenta... 27 3.3
pdb|1ANW|A Chain A, Annexin V >gi|809186|pdb|1ANW|B Chain B... 27 3.3
pdb|1AVH|A Chain A, Annexin V (Hexagonal Crystal Form) >gi|... 27 3.3
pdb|1HVF| Annexin V (Lipocortin V, Endonexin Ii, Placenta... 27 3.3
pdb|1HVG| Annexin V (Lipocortin V, Endonexin Ii, Placenta... 27 3.3
pdb|2PIA| Phthalate Dioxygenase Reductase (E.C.1.18.1.) 25 7.3
pdb|1AMF| Crystal Structure Of Moda, A Molybdate Transpor... 25 7.3
pdb|1BIF| 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphospha... 25 9.5
pdb|1B9M|A Chain A, Regulator From Escherichia Coli >gi|754... 25 9.5
pdb|1CF7|A Chain A, Structural Basis Of Dna Recognition By ... 25 9.5
pdb|2BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bi... 25 9.5
pdb|3BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bi... 25 9.5
>pdb|1QPO|A Chain A, Quinolinate Phosphoribosyl Transferase (Qaprtase) Apo-
Enzyme From Mycobacterium Tuberculosis
pdb|1QPO|B Chain B, Quinolinate Phosphoribosyl Transferase (Qaprtase) Apo-
Enzyme From Mycobacterium Tuberculosis
pdb|1QPO|C Chain C, Quinolinate Phosphoribosyl Transferase (Qaprtase) Apo-
Enzyme From Mycobacterium Tuberculosis
pdb|1QPO|D Chain D, Quinolinate Phosphoribosyl Transferase (Qaprtase) Apo-
Enzyme From Mycobacterium Tuberculosis
pdb|1QPO|E Chain E, Quinolinate Phosphoribosyl Transferase (Qaprtase) Apo-
Enzyme From Mycobacterium Tuberculosis
pdb|1QPO|F Chain F, Quinolinate Phosphoribosyl Transferase (Qaprtase) Apo-
Enzyme From Mycobacterium Tuberculosis
pdb|1QPR|A Chain A, Quinolinate Phosphoribosyltransferase (Qaprtase) From
Mycobacterium Tuberculosis In Complex With Phthalate And
Prpcp
pdb|1QPR|B Chain B, Quinolinate Phosphoribosyltransferase (Qaprtase) From
Mycobacterium Tuberculosis In Complex With Phthalate And
Prpcp
pdb|1QPR|C Chain C, Quinolinate Phosphoribosyltransferase (Qaprtase) From
Mycobacterium Tuberculosis In Complex With Phthalate And
Prpcp
pdb|1QPR|D Chain D, Quinolinate Phosphoribosyltransferase (Qaprtase) From
Mycobacterium Tuberculosis In Complex With Phthalate And
Prpcp
pdb|1QPR|E Chain E, Quinolinate Phosphoribosyltransferase (Qaprtase) From
Mycobacterium Tuberculosis In Complex With Phthalate And
Prpcp
pdb|1QPR|F Chain F, Quinolinate Phosphoribosyltransferase (Qaprtase) From
Mycobacterium Tuberculosis In Complex With Phthalate And
Prpcp
pdb|1QPQ|A Chain A, Structure Of Quinolinic Acid Phosphoribosyltransferase
From Mycobacterium Tuberculosis: A Potential Tb Drug
Target
pdb|1QPQ|B Chain B, Structure Of Quinolinic Acid Phosphoribosyltransferase
From Mycobacterium Tuberculosis: A Potential Tb Drug
Target
pdb|1QPQ|C Chain C, Structure Of Quinolinic Acid Phosphoribosyltransferase
From Mycobacterium Tuberculosis: A Potential Tb Drug
Target
pdb|1QPQ|D Chain D, Structure Of Quinolinic Acid Phosphoribosyltransferase
From Mycobacterium Tuberculosis: A Potential Tb Drug
Target
pdb|1QPQ|E Chain E, Structure Of Quinolinic Acid Phosphoribosyltransferase
From Mycobacterium Tuberculosis: A Potential Tb Drug
Target
pdb|1QPQ|F Chain F, Structure Of Quinolinic Acid Phosphoribosyltransferase
From Mycobacterium Tuberculosis: A Potential Tb Drug
Target
pdb|1QPN|A Chain A, Quinolinate Phosphoribosyl Transferase From Mycobacterium
Tuberculosis In Complex With Ncnn
pdb|1QPN|B Chain B, Quinolinate Phosphoribosyl Transferase From Mycobacterium
Tuberculosis In Complex With Ncnn
pdb|1QPN|C Chain C, Quinolinate Phosphoribosyl Transferase From Mycobacterium
Tuberculosis In Complex With Ncnn
pdb|1QPN|D Chain D, Quinolinate Phosphoribosyl Transferase From Mycobacterium
Tuberculosis In Complex With Ncnn
pdb|1QPN|E Chain E, Quinolinate Phosphoribosyl Transferase From Mycobacterium
Tuberculosis In Complex With Ncnn
pdb|1QPN|F Chain F, Quinolinate Phosphoribosyl Transferase From Mycobacterium
Tuberculosis In Complex With Ncnn
Length = 284
Score = 165 bits (418), Expect = 5e-42
Identities = 99/275 (36%), Positives = 150/275 (54%), Gaps = 7/275 (2%)
Query: 4 RTFLERALKEDLGHGDLFERVLEKDFKAT--AFVRAKQEGVFSGEKYAL----ELLEMTG 57
R + R L EDL +G + AT A + ++ GV +G AL E+L G
Sbjct: 11 RAAIARGLDEDLRYGPDVTTLATVPASATTTASLVTREAGVVAGLDVALLTLNEVLGTNG 70
Query: 58 IECVQTIKDKERFKPKDALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVEALNSH 117
+ ++D R P +ALM + LL ERT+LNL+ H SGIAT T+ +V+A+
Sbjct: 71 YRVLDRVEDGARVPPGEALMTLEAQTRGLLTAERTMLNLVGHLSGIATATAAWVDAVRGT 130
Query: 118 KVRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARK 177
K ++ DTRKT P LR +KY+V GG NHRLGL DA ++KD H+ + L R
Sbjct: 131 KAKIRDTRKTLPGLRALQKYAVRTGGGVNHRLGLGDAALIKDNHVAAAGSVVDALRAVRN 190
Query: 178 NLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYRDAHYPFVLLEASGN 237
P E+E +S E+ + ++++ DN +V +T+ RD+ P V+LE+SG
Sbjct: 191 AAP-DLPCEVEVDSLEQLDAVLPEKPELILLDNFAVWQTQTAVQRRDSRAPTVMLESSGG 249
Query: 238 ISLESINAYAKSGVDAISVGALIHQATFIDMHMKM 272
+SL++ YA++GVD ++VGAL H +D+ + M
Sbjct: 250 LSLQTAATYAETGVDYLAVGALTHSVRVLDIGLDM 284
>pdb|1QAP|A Chain A, Quinolinic Acid Phosphoribosyltransferase With Bound
Quinolinic Acid
pdb|1QAP|B Chain B, Quinolinic Acid Phosphoribosyltransferase With Bound
Quinolinic Acid
Length = 296
Score = 155 bits (391), Expect = 6e-39
Identities = 97/279 (34%), Positives = 159/279 (56%), Gaps = 12/279 (4%)
Query: 1 MEIRTFLERALKEDLGH-----GDLFERVLEKDFKATAFVRAKQEGVFSGEKYALEL-LE 54
++I + +AL+EDLG D+ ++L D +A A V +++GVF G+++ E+ ++
Sbjct: 20 LDIPAAVAQALREDLGGEVDAGNDITAQLLPADTQAHATVITREDGVFCGKRWVEEVFIQ 79
Query: 55 MTGIECVQT--IKDKERFKPKDALMEIRGDFSMLLKVERTLLNLLQHSSGIATLTSRFVE 112
+ G + T + D + + E++G +LL ERT LN +Q SG+A+ R+V
Sbjct: 80 LAGDDVRLTWHVDDGDAIHANQTVFELQGPARVLLTGERTALNFVQTLSGVASEVRRYVG 139
Query: 113 ALNSHKVRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFL 172
L + +LLDTRKT P LR KY+VL GG +NHRLGL DA ++K+ H+ ++ +
Sbjct: 140 LLAGTQTQLLDTRKTLPGLRTALKYAVLCGGGANHRLGLTDAFLIKENHIIASGSVRQAV 199
Query: 173 THARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAYRDAHYPFVLL 232
A P +E+E E+ +E +A+ AGADI+M DN + + +E + L
Sbjct: 200 EKAFWLHP-DVPVEVEVENLDELDDALKAGADIIMLDNFNTDQMREAVKRVNGQ---ARL 255
Query: 233 EASGNISLESINAYAKSGVDAISVGALIHQATFIDMHMK 271
E SGN++ E++ +A++GVD ISVGAL +D+ M+
Sbjct: 256 EVSGNVTAETLREFAETGVDFISVGALTKHVRALDLSMR 294
>pdb|1ZFJ|A Chain A, Inosine Monophosphate Dehydrogenase (Impdh; Ec 1.1.1.205)
From Streptococcus Pyogenes
Length = 491
Score = 38.9 bits (89), Expect = 6e-04
Identities = 31/102 (30%), Positives = 49/102 (47%), Gaps = 10/102 (9%)
Query: 165 VKDLKSFLT--HARKN----LPFTAKIEIECESFEEAKNAMNAGADIVMCDNL---SVLE 215
+KD++ + HA K+ L A + + ++FE A+ AGAD ++ D S
Sbjct: 202 IKDIEKVIEFPHAAKDEFGRLLVAAAVGVTSDTFERAEALFEAGADAIVIDTAHGHSAGV 261
Query: 216 TKEIAAYRDAHYPFVLLEASGNISLESINAYAKSGVDAISVG 257
++IA R AH+P L A + E A +GVD + VG
Sbjct: 262 LRKIAEIR-AHFPNRTLIAGNIATAEGARALYDAGVDVVKVG 302
>pdb|1G5N|A Chain A, Annexin V Complex With Heparin Oligosaccharides
pdb|1A8A| Rat Annexin V Complexed With Glycerophosphoserine
pdb|1A8B| Rat Annexin V Complexed With Glycerophosphoethanolamine
Length = 318
Score = 29.6 bits (65), Expect = 0.39
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ +L TR L R+F+KY ++G + + + L++ L VK ++S + +
Sbjct: 192 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAYLAET 251
Query: 179 LPFTAK 184
L + K
Sbjct: 252 LYYAMK 257
>pdb|2RAN| Annexin V
Length = 316
Score = 29.6 bits (65), Expect = 0.39
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ +L TR L R+F+KY ++G + + + L++ L VK ++S + +
Sbjct: 192 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAYLAET 251
Query: 179 LPFTAK 184
L + K
Sbjct: 252 LYYAMK 257
>pdb|1BCW| Recombinant Rat Annexin V, T72a Mutant
Length = 319
Score = 29.6 bits (65), Expect = 0.39
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ +L TR L R+F+KY ++G + + + L++ L VK ++S + +
Sbjct: 193 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAYLAET 252
Query: 179 LPFTAK 184
L + K
Sbjct: 253 LYYAMK 258
>pdb|1BCY| Recombinant Rat Annexin V, T72k Mutant
Length = 319
Score = 29.6 bits (65), Expect = 0.39
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ +L TR L R+F+KY ++G + + + L++ L VK ++S + +
Sbjct: 193 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAYLAET 252
Query: 179 LPFTAK 184
L + K
Sbjct: 253 LYYAMK 258
>pdb|1BCZ| Recombinant Rat Annexin V, T72s Mutant
Length = 319
Score = 29.6 bits (65), Expect = 0.39
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ +L TR L R+F+KY ++G + + + L++ L VK ++S + +
Sbjct: 193 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAYLAET 252
Query: 179 LPFTAK 184
L + K
Sbjct: 253 LYYAMK 258
>pdb|1BC0| Recombinant Rat Annexin V, W185a Mutant
Length = 319
Score = 29.6 bits (65), Expect = 0.39
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ +L TR L R+F+KY ++G + + + L++ L VK ++S + +
Sbjct: 193 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGNLENLLLAVVKSIRSIPAYLAET 252
Query: 179 LPFTAK 184
L + K
Sbjct: 253 LYYAMK 258
>pdb|1BC1| Recombinant Rat Annexin V, Quadruple Mutant (T72k, S144k, S228k,
S303k)
Length = 319
Score = 28.9 bits (63), Expect = 0.66
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ +L TR L R+F+KY ++G + + L++ L VK ++S + +
Sbjct: 193 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETKGNLENLLLAVVKSIRSIPAYLAET 252
Query: 179 LPFTAK 184
L + K
Sbjct: 253 LYYAMK 258
>pdb|1BC3| Recombinant Rat Annexin V, Triple Mutant (T72k, S144k, S228k)
Length = 319
Score = 28.9 bits (63), Expect = 0.66
Identities = 16/66 (24%), Positives = 31/66 (46%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ +L TR L R+F+KY ++G + + L++ L VK ++S + +
Sbjct: 193 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETKGNLENLLLAVVKSIRSIPAYLAET 252
Query: 179 LPFTAK 184
L + K
Sbjct: 253 LYYAMK 258
>pdb|1SAV| Human Annexin V With Proline Substitution By Thioproline
Length = 320
Score = 27.3 bits (59), Expect = 1.9
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ + TR L ++F+KY ++G + + + L+ L VK ++S + +
Sbjct: 195 ITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVKSIRSIXAYLAET 254
Query: 179 LPFTAK 184
L + K
Sbjct: 255 LYYAMK 260
>pdb|1M43|A Chain A, Crystal Structure Of Pmii In Complex With Pepstatin A To
2.4 A
pdb|1M43|B Chain B, Crystal Structure Of Pmii In Complex With Pepstatin A To
2.4 A
pdb|1LEE|A Chain A, Crystal Structure Of Plasmepsin From P. Falciparum In
Complex With Inhibitor Rs367
pdb|1LF2|A Chain A, Crystal Structure Of Plasmepsin Ii From P Falciparum In
Complex With Inhibitor Rs370
Length = 331
Score = 26.9 bits (58), Expect = 2.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 224 DAHYPFVLLEASGNISLESINAYAKSGVDAISV 256
D ++ L GNISLE N SG AI+V
Sbjct: 192 DLYWQITLDAHVGNISLEKANCIVDSGTSAITV 224
>pdb|1ALA| Annexin V
Length = 321
Score = 26.9 bits (58), Expect = 2.5
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ +L TR L R+F+KY ++G + + + L+ L VK ++S + +
Sbjct: 195 ITILGTRSVSHLRRVFDKYMTISGFQIEETIDRETSGDLEKLLLAVVKCIRSVPAYFAET 254
Query: 179 LPFTAK 184
L ++ K
Sbjct: 255 LYYSMK 260
>pdb|1HVD| Annexin V (Lipocortin V, Endonexin Ii, Placental Anticoagulant
Protein) (Calcium Ions Are Visible) Mutation With Glu 17
Replaced By Gly (E17g)
Length = 319
Score = 26.6 bits (57), Expect = 3.3
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ + TR L ++F+KY ++G + + + L+ L VK ++S + +
Sbjct: 194 ITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVKSIRSIPAYLAET 253
Query: 179 LPFTAK 184
L + K
Sbjct: 254 LYYAMK 259
>pdb|1ANW|A Chain A, Annexin V
pdb|1ANW|B Chain B, Annexin V
pdb|1ANX|A Chain A, Annexin V
pdb|1ANX|B Chain B, Annexin V
pdb|1ANX|C Chain C, Annexin V
Length = 319
Score = 26.6 bits (57), Expect = 3.3
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ + TR L ++F+KY ++G + + + L+ L VK ++S + +
Sbjct: 194 ITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVKSIRSIPAYLAET 253
Query: 179 LPFTAK 184
L + K
Sbjct: 254 LYYAMK 259
>pdb|1AVH|A Chain A, Annexin V (Hexagonal Crystal Form)
pdb|1AVH|B Chain B, Annexin V (Hexagonal Crystal Form)
pdb|1HAK|A Chain A, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1HAK|B Chain B, Crystal Structure Of Recombinant Human Placental Annexin V
Complexed With K-201 As A Calcium Channel Activity
Inhibitor
pdb|1AVR| Annexin V (Rhombohedral Crystal Form)
Length = 320
Score = 26.6 bits (57), Expect = 3.3
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ + TR L ++F+KY ++G + + + L+ L VK ++S + +
Sbjct: 195 ITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVKSIRSIPAYLAET 254
Query: 179 LPFTAK 184
L + K
Sbjct: 255 LYYAMK 260
>pdb|1HVF| Annexin V (Lipocortin V, Endonexin Ii, Placental Anticoagulant
Protein) Mutant With Glu 17 Replaced By Gly, Glu 78
Replaced By Gln (E17g,E78q) Complexed With Calcium
Length = 319
Score = 26.6 bits (57), Expect = 3.3
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ + TR L ++F+KY ++G + + + L+ L VK ++S + +
Sbjct: 194 ITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVKSIRSIPAYLAET 253
Query: 179 LPFTAK 184
L + K
Sbjct: 254 LYYAMK 259
>pdb|1HVG| Annexin V (Lipocortin V, Endonexin Ii, Placental Anticoagulant
Protein) (Calcium Ions Are Visible) Mutant With Glu 78
Replaced By Gln (E78q) (Second Crystal Form)
pdb|1HVE| Annexin V (Lipocortin V, Endonexin Ii, Placental Anticoagulant
Protein) (Calcium Ions Are Visible) Mutant With Glu 78
Replaced By Gln (E78q)
Length = 319
Score = 26.6 bits (57), Expect = 3.3
Identities = 14/66 (21%), Positives = 30/66 (45%)
Query: 119 VRLLDTRKTRPLLRIFEKYSVLNGGASNHRLGLDDALMLKDTHLRHVKDLKSFLTHARKN 178
+ + TR L ++F+KY ++G + + + L+ L VK ++S + +
Sbjct: 194 ITIFGTRSVSHLRKVFDKYMTISGFQIEETIDRETSGNLEQLLLAVVKSIRSIPAYLAET 253
Query: 179 LPFTAK 184
L + K
Sbjct: 254 LYYAMK 259
>pdb|2PIA| Phthalate Dioxygenase Reductase (E.C.1.18.1.)
Length = 321
Score = 25.4 bits (54), Expect = 7.3
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 164 HVKDLKSFLTHARKNLPFTAKIEIECESFEEAKN 197
H + + T+AR+N PFT ++ SFE N
Sbjct: 221 HFESFGATNTNARENTPFTVRLSRSGTSFEIPAN 254
>pdb|1AMF| Crystal Structure Of Moda, A Molybdate Transport Protein,
Complexed With Molybdate
pdb|1WOD| Crystal Structure Of Moda, A Molybdate Protein, Complexed With
Tungstate
Length = 233
Score = 25.4 bits (54), Expect = 7.3
Identities = 13/55 (23%), Positives = 26/55 (46%)
Query: 194 EAKNAMNAGADIVMCDNLSVLETKEIAAYRDAHYPFVLLEASGNISLESINAYAK 248
EA + G+D V + V+ T +++ YP ++E N ++++ Y K
Sbjct: 163 EAPLGIVYGSDAVASKGVKVVATFPEDSHKKVEYPVAVVEGHNNATVKAFYDYLK 217
>pdb|1BIF| 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase Bifunctional
Enzyme Complexed With Atp-G-S And Phosphate
Length = 469
Score = 25.0 bits (53), Expect = 9.5
Identities = 15/66 (22%), Positives = 33/66 (49%), Gaps = 12/66 (18%)
Query: 163 RHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAY 222
+++KDLK F + ++ + + + E F + N ++AG +C+ ++ E ++
Sbjct: 292 QNIKDLKVFTSQMKRTIQTAEALSVPYEQF-KVLNEIDAG----VCEEMTYEEIQD---- 342
Query: 223 RDAHYP 228
HYP
Sbjct: 343 ---HYP 345
>pdb|1B9M|A Chain A, Regulator From Escherichia Coli
pdb|1B9M|B Chain B, Regulator From Escherichia Coli
Length = 265
Score = 25.0 bits (53), Expect = 9.5
Identities = 35/150 (23%), Positives = 63/150 (41%), Gaps = 17/150 (11%)
Query: 84 SMLLKVERTLLNLLQHSSGIATLTSRFVEALNSHKVRLLDTRKTRPLLRIFEKYSVLNGG 143
S+L + R L + T+T+R + + H LL KTR + I +
Sbjct: 116 SLLAAISRFSLQTSARNQWFGTITARDHDDVQQHVDVLLADGKTRLKVAITAQ------- 168
Query: 144 ASNHRLGLDDA----LMLKDTHLRHVKDLKSFLTHARKNLP-FTAKIE---IECESFEEA 195
S RLGLD+ ++LK + +D ++ +A LP + IE +CE
Sbjct: 169 -SGARLGLDEGKEVLILLKAPWVGITQD-EAVAQNADNQLPGIISHIERGAEQCEVLXAL 226
Query: 196 KNAMNAGADIVMCDNLSVLETKEIAAYRDA 225
+ A + + + S+ + + + AY +A
Sbjct: 227 PDGQTLCATVPVNEATSLQQGQNVTAYFNA 256
>pdb|1CF7|A Chain A, Structural Basis Of Dna Recognition By The Heterodimeric
Cell Cycle Transcription Factor E2f-Dp
Length = 76
Score = 25.0 bits (53), Expect = 9.5
Identities = 16/51 (31%), Positives = 24/51 (46%), Gaps = 6/51 (11%)
Query: 98 QHSSGIATLTSRFVEALNSHKVRLL------DTRKTRPLLRIFEKYSVLNG 142
+H + LT++FV L K +L DT R RI++ +VL G
Sbjct: 7 RHEKSLGLLTTKFVSLLQEAKDGVLDLKLAADTLAVRQKRRIYDITNVLEG 57
>pdb|2BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase H256a
Mutant With F6p In Phosphatase Active Site
pdb|2BIF|B Chain B, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase H256a
Mutant With F6p In Phosphatase Active Site
Length = 469
Score = 25.0 bits (53), Expect = 9.5
Identities = 15/66 (22%), Positives = 33/66 (49%), Gaps = 12/66 (18%)
Query: 163 RHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAY 222
+++KDLK F + ++ + + + E F + N ++AG +C+ ++ E ++
Sbjct: 292 QNIKDLKVFTSQMKRTIQTAEALSVPYEQF-KVLNEIDAG----VCEEMTYEEIQD---- 342
Query: 223 RDAHYP 228
HYP
Sbjct: 343 ---HYP 345
>pdb|3BIF|A Chain A, 6-Phosphofructo-2-KinaseFRUCTOSE-2,6-Bisphosphatase Empty
6-Pf-2k Active Site
Length = 468
Score = 25.0 bits (53), Expect = 9.5
Identities = 15/66 (22%), Positives = 33/66 (49%), Gaps = 12/66 (18%)
Query: 163 RHVKDLKSFLTHARKNLPFTAKIEIECESFEEAKNAMNAGADIVMCDNLSVLETKEIAAY 222
+++KDLK F + ++ + + + E F + N ++AG +C+ ++ E ++
Sbjct: 291 QNIKDLKVFTSQMKRTIQTAEALSVPYEQF-KVLNEIDAG----VCEEMTYEEIQD---- 341
Query: 223 RDAHYP 228
HYP
Sbjct: 342 ---HYP 344
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.321 0.136 0.374
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,374,727
Number of Sequences: 13198
Number of extensions: 51678
Number of successful extensions: 137
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 112
Number of HSP's gapped (non-prelim): 26
length of query: 273
length of database: 2,899,336
effective HSP length: 87
effective length of query: 186
effective length of database: 1,751,110
effective search space: 325706460
effective search space used: 325706460
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)