BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646041|ref|NP_208223.1| histidine and
glutamine-rich protein [Helicobacter pylori 26695]
(72 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1QB3|B Chain B, Crystal Structure Of The Cell Cycle Reg... 38 2e-04
pdb|1D1D|A Chain A, Nmr Solution Structure Of The Capsid Pr... 35 0.002
pdb|1EY2|A Chain A, Human Homogentisate Dioxygenase With Fe... 34 0.003
pdb|1JXI|A Chain A, 4-Amino-5-Hydroxymethyl-2-Methylpyrimid... 33 0.006
pdb|1D0H|A Chain A, The Hc Fragment Of Tetanus Toxin Comple... 33 0.006
pdb|1JPK|A Chain A, Gly156asp Mutant Of Human Urod, Human U... 33 0.006
pdb|1JPH|A Chain A, Ile260thr Mutant Of Human Urod, Human U... 33 0.006
pdb|1JPI|A Chain A, Phe232leu Mutant Of Human Urod, Human U... 33 0.006
pdb|1K8W|A Chain A, Crystal Structure Of The E. Coli Pseudo... 33 0.008
pdb|1JR2|A Chain A, Structure Of Uroporphyrinogen Iii Synth... 33 0.008
pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) ... 32 0.017
pdb|1HCD| Hisactophilin (Nmr, 1 Structure) >gi|640444|pdb... 31 0.022
pdb|1KXU| Cyclin H, A Positive Regulatory Subunit Of Cdk ... 30 0.038
pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Sub... 28 0.19
pdb|1GV3|A Chain A, The 2.0 Angstrom Resolution Structure O... 28 0.19
pdb|1JI7|A Chain A, Crystal Structure Of Tel Sam Polymer >g... 27 0.32
pdb|1BW8|A Chain A, Mu2 Adaptin Subunit (Ap50) Of Ap2 Adapt... 27 0.32
pdb|1M0V|A Chain A, Nmr Structure Of The Type Iii Secretory... 27 0.42
pdb|1E5W|A Chain A, Structure Of Isolated Ferm Domain And F... 27 0.42
pdb|1HY5|B Chain B, Crystal Structure Of The Catalytic Doma... 27 0.42
pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinosit... 27 0.55
pdb|1HE8|A Chain A, Ras G12v - Pi 3-Kinase Gamma Complex 27 0.55
pdb|1LBD| Ligand-Binding Domain Of The Human Nuclear Rece... 27 0.55
pdb|1KKX|A Chain A, Solution Structure Of The Dna-Binding D... 26 0.72
pdb|1K7L|A Chain A, The 2.5 Angstrom Resolution Crystal Str... 26 0.72
pdb|1J5Y|A Chain A, Crystal Structure Of Transcriptional Re... 26 0.72
pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal... 26 0.93
pdb|1G8X|A Chain A, Structure Of A Genetically Engineered M... 26 0.93
pdb|1L3A|C Chain C, Structure Of The Plant Transcriptional ... 26 0.93
pdb|1B6U| Crystal Structure Of The Human Killer Cell Inhi... 26 0.93
pdb|1KZG|A Chain A, Dbscdc42(Y889f) >gi|20151150|pdb|1KZG|C... 26 0.93
pdb|1EZK|A Chain A, Crystal Structure Of Recombinant Trypar... 26 0.93
pdb|1LB1|A Chain A, Crystal Structure Of The Dbl And Plecks... 26 0.93
pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima 26 0.93
pdb|1KZ7|A Chain A, Crystal Structure Of The DhPH FRAGMENT ... 26 0.93
pdb|1ICI|A Chain A, Crystal Structure Of A Sir2 Homolog-Nad... 26 0.93
pdb|1JPE|A Chain A, Crystal Structure Of Dsbd-Alpha; The N-... 26 0.93
pdb|1FXZ|A Chain A, Crystal Structure Of Soybean Proglycini... 26 0.93
pdb|1MFQ|C Chain C, Crystal Structure Analysis Of A Ternary... 26 0.93
pdb|1LSH|A Chain A, Lipid-Protein Interactions In Lipovitellin 25 1.2
pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A ... 25 1.2
pdb|1E5K|A Chain A, Crystal Structure Of The Molybdenum Cof... 25 1.2
pdb|3GCB| Gal6 (Yeast Bleomycin Hydrolase) Mutant C73aDEL... 25 1.2
pdb|2FCP|A Chain A, Ferric Hydroxamate Uptake Receptor (Fhu... 25 1.2
pdb|1LXL| Nmr Structure Of Bcl-Xl, An Inhibitor Of Progra... 25 1.2
pdb|1BXL|A Chain A, Structure Of Bcl-XlBAK PEPTIDE COMPLEX,... 25 1.2
pdb|1KP5|A Chain A, Cyclic Green Fluorescent Protein >gi|23... 25 1.2
pdb|1PME| Structure Of Penta Mutant Human Erk2 Map Kinase... 25 1.2
pdb|1FCP|A Chain A, Ferric Hydroxamate Uptake Receptor (Fhu... 25 1.2
pdb|1I1C|A Chain A, Non-Fcrn Binding Fc Fragment Of Rat Igg... 25 1.2
pdb|1A6R| Gal6 (Yeast Bleomycin Hydrolase) Mutant C73a 25 1.2
pdb|1EGU|A Chain A, Crystal Structure Of Streptococcus Pneu... 25 1.6
pdb|1JDQ|A Chain A, Solution Structure Of Tm006 Protein Fro... 25 1.6
pdb|1EHW|A Chain A, Human Nucleoside Diphosphate Kinase 4 >... 25 1.6
pdb|1GWN|C Chain C, The Crystal Structure Of The Core Domai... 25 1.6
pdb|1KR4|A Chain A, Structure Genomics, Protein Tm1056, Cuta 25 1.6
pdb|1FG5|N Chain N, Crystal Structure Of Bovine Alpha-1,3-G... 25 1.6
pdb|1E42|B Chain B, Beta2-Adaptin Appendage Domain, From Cl... 25 1.6
pdb|1DNY|A Chain A, Solution Structure Of Pcp, A Prototype ... 25 1.6
pdb|1FI4|A Chain A, The X-Ray Crystal Structure Of Mevalona... 25 1.6
pdb|1IG3|A Chain A, Mouse Thiamin Pyrophosphokinase Complex... 25 1.6
pdb|1JT0|A Chain A, Crystal Structure Of A Cooperative Qacr... 25 1.6
pdb|1IW5|A Chain A, Solution Structure Of The Bola-Like Pro... 25 1.6
pdb|1KNA|A Chain A, Chromo Domain Of Hp1 Complexed With His... 25 1.6
pdb|1K7K|A Chain A, Putative Ribosomal Protein 25 1.6
pdb|1BB9| Crystal Structure Of The Sh3 Domain From Rat Am... 25 1.6
pdb|1CBF| The X-Ray Structure Of A Cobalamin Biosynthetic... 25 1.6
pdb|1DTO|A Chain A, Crystal Structure Of The Complete Trans... 25 1.6
pdb|4HB1| A Designed Four Helix Bundle Protein 25 1.6
pdb|1GYU|A Chain A, Gamma-Adaptin Appendage Domain From Cla... 25 1.6
pdb|1L9X|B Chain B, Structure Of Gamma-Glutamyl Hydrolase >... 25 1.6
pdb|2LBD| Ligand-Binding Domain Of The Human Retinoic Aci... 25 1.6
pdb|1JYL|A Chain A, Catalytic Mechanism Of Ctp:phosphocholi... 25 1.6
pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer 25 1.6
pdb|1FV3|A Chain A, The Hc Fragment Of Tetanus Toxin Comple... 25 1.6
pdb|1L2J|A Chain A, Human Estrogen Receptor Beta Ligand-Bin... 25 1.6
pdb|1G8O|A Chain A, Crystallographic Structure Of The Nativ... 25 1.6
pdb|1KZF|A Chain A, Crystal Structure Of The Acyl-Homoserin... 25 1.6
pdb|1K0R|A Chain A, Crystal Structure Of Mycobacterium Tube... 25 1.6
pdb|1JMA|B Chain B, Crystal Structure Of The Herpes Simplex... 25 1.6
pdb|1KU1|A Chain A, Crystal Structure Of The Sec7 Domain Of... 25 1.6
pdb|1A9U| The Complex Structure Of The Map Kinase P38SB20... 25 1.6
pdb|1JJR|A Chain A, The Three-Dimensional Structure Of The ... 25 1.6
pdb|1JYK|A Chain A, Catalytic Mechanism Of Ctp:phosphocholi... 25 1.6
pdb|1J6Y|A Chain A, Solution Structure Of Pin1at From Arabi... 25 1.6
pdb|1JUS|A Chain A, Crystal Structure Of The Multidrug Bind... 25 1.6
pdb|1A02|N Chain N, Structure Of The Dna Binding Domains Of... 25 1.6
pdb|1M1M|A Chain A, X-Ray Crystal Structure Of Mycobacteriu... 25 1.6
pdb|1E17|A Chain A, Solution Structure Of The Dna Binding D... 25 1.6
pdb|1K99|A Chain A, Solution Structure Of The First Hmg Box... 25 1.6
pdb|1UXD| Fructose Repressor Dna-Binding Domain, Nmr, 34 ... 25 1.6
pdb|2HFH| The Nmr Structures Of A Winged Helix Protein: G... 25 1.6
pdb|1P38| The Structure Of The Map Kinase P38 At 2.1 Angs... 25 1.6
pdb|1JE3|A Chain A, Solution Structure Of Ec005 From Escher... 25 1.6
pdb|1I39|A Chain A, Rnase Hii From Archaeoglobus Fulgidus >... 25 1.6
pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic ... 25 2.1
pdb|1K51|A Chain A, A G55a Mutation Induces 3d Domain Swapp... 25 2.1
pdb|1MGP|A Chain A, Hypothetical Protein Tm841 From Thermot... 25 2.1
pdb|1HZT|A Chain A, Crystal Structure Of Metal-Free Isopent... 25 2.1
pdb|1HX3|B Chain B, Crystal Structure Of E.Coli Isopentenyl... 25 2.1
pdb|1QFG|A Chain A, E. Coli Ferric Hydroxamate Receptor (Fh... 25 2.1
pdb|1AZT|B Chain B, Gs-Alpha Complexed With Gtp-Gamma-S >gi... 25 2.1
pdb|1K53|A Chain A, Monomeric Protein L B1 Domain With A G1... 25 2.1
pdb|1FI1|A Chain A, Fhua In Complex With Lipopolysaccharide... 25 2.1
pdb|1CJU|C Chain C, Complex Of Gs-Alpha With The Catalytic ... 25 2.1
pdb|1MB1| Mbp1 From Saccharomyces Cerevisiae 25 2.1
pdb|1K52|B Chain B, Monomeric Protein L B1 Domain With A K5... 25 2.1
pdb|1GV4|A Chain A, Murine Apoptosis-Inducing Factor (Aif) ... 25 2.1
pdb|1F2V|A Chain A, Crystal Structure Analysis Of Precorrin... 25 2.1
pdb|1QFF|A Chain A, E. Coli Ferric Hydroxamate Uptake Recep... 25 2.1
pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic ... 25 2.1
pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Do... 25 2.1
pdb|1DF9|A Chain A, Dengue Virus Ns3-Protease Complexed Wit... 25 2.1
pdb|1HZ5|B Chain B, Crystal Structures Of The B1 Domain Of ... 25 2.1
pdb|1MHX|A Chain A, Crystal Structures Of The Redesigned Pr... 25 2.1
pdb|1C2P|B Chain B, Hepatitis C Virus Ns5b Rna-Dependent Rn... 25 2.1
pdb|1J6U|A Chain A, Crystal Structure Of Udp-N-Acetylmurama... 25 2.1
pdb|1K92|A Chain A, Crystal Structure Of Uncomplexed E. Col... 25 2.1
pdb|1MI0|A Chain A, Crystal Structure Of The Redesigned Pro... 25 2.1
pdb|1F2X|L Chain L, Structure Of The Single-Domain Camelid ... 24 2.7
pdb|1QUV|A Chain A, Crystal Structure Of The Rna Directed R... 24 2.7
pdb|1JS1|X Chain X, Crystal Structure Of A New Transcarbamy... 24 2.7
pdb|1KIC|A Chain A, Inosine-Adenosine-Guanosine Preferring ... 24 2.7
pdb|1MHC|A Chain A, Model Of Mhc Class I H2-M3 With Nonapep... 24 2.7
pdb|1H65|A Chain A, Crystal Structure Of Pea Toc34 - A Nove... 24 2.7
pdb|1IBX|A Chain A, Nmr Structure Of Dff40 And Dff45 N-Term... 24 2.7
pdb|1K6L|M Chain M, Photosynethetic Reaction Center From Rh... 24 2.7
pdb|1HUF|A Chain A, Crystal Structure Of The N-Terminal Dom... 24 2.7
pdb|1HP0|A Chain A, Crystal Structure Of An Inosine-Adenosi... 24 2.7
pdb|1QOM|A Chain A, Murine Inducible Nitric Oxide Synthase ... 24 2.7
pdb|1DD9|A Chain A, Structure Of The Dnag Catalytic Core >g... 24 2.7
pdb|1BC9| Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Ave... 24 3.6
pdb|1LR0|A Chain A, Pseudomonas Aeruginosa Tola Domain Iii,... 24 3.6
pdb|1J8C|A Chain A, Solution Structure Of The Ubiquitin-Lik... 24 3.6
pdb|1E7Z|A Chain A, Crystal Structure Of The Emap2RNA BINDI... 24 3.6
pdb|1L5Y|A Chain A, Crystal Structure Of Mg2+ BEF3-Bound R... 24 3.6
pdb|1I3O|B Chain B, Crystal Structure Of The Complex Of Xia... 24 3.6
pdb|1GD0|A Chain A, Human Macrophage Migration Inhibitory F... 24 3.6
pdb|1A1W| Fadd Death Effector Domain, F25y Mutant, Nmr Mi... 24 3.6
pdb|1D1R|A Chain A, Nmr Solution Structure Of The Product O... 24 3.6
pdb|1PLS| Pleckstrin (N-Terminal Pleckstrin Homology Doma... 24 3.6
pdb|1FXX|A Chain A, The Structure Of Exonuclease I Suggests... 24 3.6
pdb|1M9S|A Chain A, Crystal Structure Of Internalin B (Inlb... 24 3.6
pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structur... 24 3.6
pdb|1JU3|A Chain A, Bacterial Cocaine Esterase Complex With... 24 3.6
pdb|1KBU|A Chain A, Cre Recombinase Bound To A Loxp Hollida... 24 3.6
pdb|1H6Y|A Chain A, The Role Of Conserved Amoni Acids In Th... 24 3.6
pdb|1C5K|A Chain A, The Structure Of Tolb, An Essential Com... 24 3.6
pdb|1AMU|B Chain B, Phenylalanine Activating Domain Of Gram... 24 3.6
pdb|1K3K|A Chain A, Solution Structure Of A Bcl-2 Homolog F... 24 3.6
pdb|1F17|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase Compl... 24 3.6
pdb|1IIR|A Chain A, Crystal Structure Of Udp-Glucosyltransf... 24 3.6
pdb|1RRB| The Ras-Binding Domain Of Raf-1 From Rat, Nmr, ... 24 3.6
pdb|1KXR|B Chain B, Crystal Structure Of Calcium-Bound Prot... 24 3.6
pdb|1JID|A Chain A, Human Srp19 In Complex With Helix 6 Of ... 24 3.6
pdb|1DDF| Fas Death Domain, Nmr, Minimized Average Structure 24 3.6
pdb|1KKD|A Chain A, Solution Structure Of The Calmodulin Bi... 24 3.6
pdb|1LN4|A Chain A, Crystal Structure Of E. Coli Yhby 24 3.6
pdb|1HM9|A Chain A, Crystal Structure Of S.Pneumoniae N-Ace... 24 3.6
pdb|1MSZ|A Chain A, Solution Structure Of The R3h Domain Fr... 24 3.6
pdb|1EFH|B Chain B, Crystal Structure Of The Human Hydroxys... 24 3.6
pdb|1F0K|A Chain A, The 1.9 Angstrom Crystal Structure Of E... 24 3.6
pdb|1MM4|A Chain A, Solution Nmr Structure Of The Outer Mem... 24 3.6
pdb|1KEZ|A Chain A, Crystal Structure Of The Macrocycle-For... 24 3.6
pdb|1GKL|A Chain A, S954a Mutant Of The Feruloyl Esterase M... 24 3.6
pdb|1D2D|A Chain A, Hamster Eprs Second Repeated Element; N... 24 3.6
pdb|1J6O|A Chain A, Crystal Structure Of Conserved Hypothet... 24 3.6
pdb|1GQF|A Chain A, Crystal Structure Of Human Procaspase-7... 24 3.6
pdb|1FL0|A Chain A, Crystal Structure Of The Emap2RNA-Bindi... 24 3.6
pdb|1GKK|A Chain A, Feruloyl Esterase Domain Of Xyny From C... 24 3.6
pdb|1MC0|A Chain A, Regulatory Segment Of Mouse 3',5'-Cycli... 24 3.6
pdb|1JH3|A Chain A, Solution Structure Of Tyrosyl-Trna Synt... 24 3.6
pdb|1FVR|A Chain A, Tie2 Kinase Domain >gi|15988251|pdb|1FV... 24 3.6
pdb|1JG2|A Chain A, Crystal Structure Of L-Isoaspartyl (D-A... 24 3.6
pdb|1FNO|A Chain A, Peptidase T (Tripeptidase) 24 3.6
pdb|1QKK|A Chain A, Crystal Structure Of The Receiver Domai... 24 3.6
pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpa... 24 3.6
pdb|1K8M|A Chain A, Solution Structure Of The Lipoic Acid-B... 24 3.6
pdb|1H6X|A Chain A, The Role Of Conserved Amoni Acids In Th... 24 3.6
pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79a... 24 3.6
pdb|1L8Y|A Chain A, Solution Structure Of Hmg Box 5 In Huma... 24 3.6
pdb|1A1Z| Fadd Death Effector Domain, F25g Mutant, Nmr Mi... 24 3.6
pdb|1J5W|A Chain A, Crystal Structure Of Glycyl-Trna Synthe... 24 3.6
pdb|1JYM|A Chain A, Crystals Of Peptide Deformylase From Pl... 24 3.6
pdb|1MMU|A Chain A, Crystal Structure Of Galactose Mutarota... 24 3.6
pdb|1K2E|A Chain A, Crystal Structure Of A Nudix Protein Fr... 24 3.6
pdb|1JXQ|A Chain A, Structure Of Cleaved, Card Domain Delet... 23 4.6
pdb|1E0R|B Chain B, Beta-Apical Domain Of Thermosome 23 4.6
pdb|3HAD|A Chain A, Biochemical Characterization And Struct... 23 4.6
pdb|1IK6|A Chain A, 3d Structure Of The E1beta Subunit Of P... 23 4.6
pdb|1F6L|L Chain L, Variable Light Chain Dimer Of Anti-Ferr... 23 4.6
pdb|1TNM| Titin Module M5 (Connectin) (Nmr, Minimized Ave... 23 4.6
pdb|1D8W|D Chain D, L-Rhamnose Isomerase >gi|10835502|pdb|1... 23 4.6
pdb|1GZU|A Chain A, Crystal Structure Of Human Nicotinamide... 23 4.6
pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamm... 23 4.6
pdb|1IFQ|B Chain B, Sec22b N-Terminal Domain >gi|14278236|p... 23 4.6
pdb|1FXK|A Chain A, Crystal Structure Of Archaeal Prefoldin... 23 4.6
pdb|1MO0|A Chain A, Structural Genomics Of Caenorhabditis E... 23 4.6
pdb|1HT1|E Chain E, Nucleotide-Dependent Conformational Cha... 23 4.6
pdb|1NCT| Titin Module M5, N-Terminally Extended, Nmr >gi... 23 4.6
pdb|1JFZ|B Chain B, Crystal Structure Of Mn(Ii)-Complex Of ... 23 4.6
pdb|1A1V|A Chain A, Hepatitis C Virus Ns3 Helicase Domain C... 23 4.6
pdb|1TIT| Titin, Ig Repeat 27, Nmr, Minimized Average Str... 23 4.6
pdb|1SKN|P Chain P, The Binding Domain Of Skn-1 In Complex ... 23 4.6
pdb|1CQX|A Chain A, Crystal Structure Of The Flavohemoglobi... 23 4.6
pdb|1BPV| Titin Module A71 From Human Cardiac Muscle, Nmr... 23 4.6
pdb|1GX3|A Chain A, M. Smegmatis Arylamine N-Acetyl Transfe... 23 6.1
pdb|1E5E|A Chain A, Methionine Gamma-Lyase (Mgl) From Trich... 23 6.1
pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Aut... 23 6.1
pdb|1NED|A Chain A, Crystal Structure Of Hslv (Clpq) At 3.8... 23 6.1
pdb|1JT7|D Chain D, Human Acidic Fibroblast Growth Factor. ... 23 6.1
pdb|1J6W|A Chain A, Crystal Structure Of Haemophilus Influe... 23 6.1
pdb|1KKL|A Chain A, L.Casei HprkP IN COMPLEX WITH B.SUBTILI... 23 6.1
pdb|1GPP|A Chain A, Crystal Structure Of The S.Cerevisiae H... 23 6.1
pdb|1II0|B Chain B, Crystal Structure Of The Escherichia Co... 23 6.1
pdb|1K5V|A Chain A, Human Acidic Fibroblast Growth Factor. ... 23 6.1
pdb|1E52|A Chain A, Solution Structure Of Escherichia Coli ... 23 6.1
pdb|1IM4|A Chain A, Crystal Structure Of A Dinb Homolog (Db... 23 6.1
pdb|1GOL| Coordinates Of Rat Map Kinase Erk2 With An Argi... 23 6.1
pdb|1JAK|A Chain A, Streptomyces Plicatus Beta-N-Acetylhexo... 23 6.1
pdb|1BPR| Nmr Structure Of The Substrate Binding Domain O... 23 6.1
pdb|1KW4|A Chain A, Polyhomeotic Sam Domain Structure 23 6.1
pdb|1KID| Groel (Hsp60 Class) Fragment (Apical Domain) Co... 23 6.1
pdb|1HR6|A Chain A, Yeast Mitochondrial Processing Peptidas... 23 6.1
pdb|1HSK|A Chain A, Crystal Structure Of S. Aureus Murb 23 6.1
pdb|1K5U|C Chain C, Human Acidic Fibroblast Growth Factor. ... 23 6.1
pdb|1J5H|A Chain A, Solution Structure Of Apo-Neocarzinosta... 23 6.1
pdb|1BGQ| Radicicol Bound To The Atp Binding Site Of The ... 23 6.1
pdb|1ESJ|A Chain A, Crystal Structure Of Thiazole Kinase Mu... 23 6.1
pdb|1FKM|A Chain A, Crystal Structure Of The YptRAB-Gap Dom... 23 6.1
pdb|1L8W|A Chain A, Crystal Structure Of Lyme Disease Varia... 23 6.1
pdb|1KKL|H Chain H, L.Casei HprkP IN COMPLEX WITH B.SUBTILI... 23 6.1
pdb|1JLJ|A Chain A, 1.6 Angstrom Crystal Structure Of The H... 23 6.1
pdb|1I4W|A Chain A, The Crystal Structure Of The Transcript... 23 6.1
pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Sy... 23 6.1
pdb|1D2N|A Chain A, D2 Domain Of N-Ethylmaleimide-Sensitive... 23 6.1
pdb|2IF1| Human Translation Initiation Factor Eif1, Nmr, ... 23 6.1
pdb|1ILG|A Chain A, Crystal Structure Of Apo Human Pregnane... 23 6.1
pdb|1JB1|A Chain A, Lactobacillus Casei HprkP BOUND TO PHOS... 23 6.1
pdb|1G5H|D Chain D, Crystal Structure Of The Accessory Subu... 23 6.1
pdb|1J6P|A Chain A, Crystal Structure Of Conserved Hypothet... 23 6.1
pdb|1K74|D Chain D, The 2.3 Angstrom Resolution Crystal Str... 23 6.1
pdb|1HW4|A Chain A, Structure Of Thymidylate Synthase Sugge... 23 6.1
pdb|1LRZ|A Chain A, X-Ray Crystal Structure Of Staphylococc... 23 6.1
pdb|1J5S|A Chain A, Crystal Structure Of Uronate Isomerase ... 23 6.1
pdb|1JTC|D Chain D, Human Acidic Fibroblast Growth Factor. ... 23 6.1
pdb|1J5R|A Chain A, Crystal Structure Of Alcohol Dehydrogen... 23 6.1
pdb|1IWG|A Chain A, Crystal Structure Of Bacterial Multidru... 23 6.1
pdb|1QOJ|B Chain B, Crystal Structure Of E.Coli Uvrb C-Term... 23 6.1
pdb|1C3Q|X Chain X, Crystal Structure Of Native Thiazole Ki... 23 6.1
pdb|1L6Z|A Chain A, Crystal Structure Of Murine Ceacam1a[1,... 23 6.1
pdb|1A4H| Structure Of The N-Terminal Domain Of The Yeast... 23 6.1
pdb|1GPO|H Chain H, Crystal Structure Of The Rationally Des... 23 6.1
pdb|1PSZ|A Chain A, Pneumococcal Surface Antigen Psaa 23 6.1
pdb|1QMH|B Chain B, Crystal Structure Of Rna 3'-Terminal Ph... 23 6.1
pdb|1IBA| Glucose Permease (Domain Iib), Nmr, 11 Structures 23 6.1
pdb|1JT5|A Chain A, Human Acidic Fibroblast Growth Factor. ... 23 6.1
pdb|1KQ4|C Chain C, Crystal Structure Of Thy1-Complementing... 23 6.1
pdb|1E69|A Chain A, Smc Head Domain From Thermotoga Maritim... 23 6.1
pdb|1J5P|A Chain A, Crystal Structure Of Conserved Hypothet... 23 6.1
pdb|1J5X|A Chain A, Crystal Structure Of Conserved Hypothet... 23 6.1
pdb|1I5N|D Chain D, Crystal Structure Of The P1 Domain Of C... 23 6.1
pdb|1JT4|A Chain A, Human Acidic Fibroblast Growth Factor. ... 23 6.1
pdb|1J6R|A Chain A, Crystal Structure Of Hypothetical Prote... 23 6.1
pdb|1AMX| Collagen-Binding Domain From A Staphylococcus A... 23 6.1
pdb|1JFN|A Chain A, Solution Structure Of Human Apolipoprot... 23 6.1
pdb|1J5T|A Chain A, Crystal Structure Of Indole-3-Glycerol ... 23 6.1
pdb|1INN|A Chain A, Crystal Structure Of D. Radiodurans Lux... 23 6.1
pdb|1FSZ| Crystal Structure Of The Cell-Division Protein ... 23 6.1
pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Co... 23 6.1
pdb|1TOL|A Chain A, Fusion Of N-Terminal Domain Of The Mino... 23 6.1
pdb|1QMI|A Chain A, Crystal Structure Of Rna 3'-Terminal Ph... 23 6.1
pdb|1VIN| Bovine Cyclin A3 23 6.1
pdb|1JML|A Chain A, Conversion Of Monomeric Protein L To An... 23 6.1
pdb|1G5I|D Chain D, Crystal Structure Of The Accessory Subu... 23 6.1
pdb|1EZT|A Chain A, High-Resolution Solution Structure Of F... 23 6.1
pdb|1ERK| Structure Of Signal-Regulated Kinase >gi|582250... 23 6.1
pdb|1KQ3|A Chain A, Crystal Structure Of Glycerol Dehydroge... 23 6.1
pdb|1J6N|A Chain A, Crystal Structure Of Cysteine Synthase ... 23 6.1
pdb|1I7D|A Chain A, Noncovalent Complex Of E.Coli Dna Topoi... 23 6.1
pdb|2G3P|A Chain A, Structure Of The N-Terminal Two Domains... 23 6.1
pdb|1K6Z|A Chain A, Crystal Structure Of The Yersinia Secre... 23 6.1
pdb|1NQB|A Chain A, Trivalent Antibody Fragment >gi|2392475... 23 6.1
pdb|1DK5|A Chain A, Crystal Structure Of Annexin 24(Ca32) F... 23 6.1
pdb|1FP0|A Chain A, Solution Structure Of The Phd Domain Fr... 23 6.1
pdb|1D4B|A Chain A, Cide-N Domain Of Human Cide-B 23 6.1
pdb|1H6E|A Chain A, Mu2 Adaptin Subunit (Ap50) Of Ap2 Adapt... 23 6.1
pdb|1B62|B Chain B, Mutl Complexed With Adp >gi|5107473|pdb... 23 6.1
pdb|1JE8|A Chain A, Two-Component Response Regulator NarlDN... 23 6.1
pdb|1JH7|A Chain A, Semi-Reduced Inhibitor-Bound Cyclic Nuc... 23 6.1
pdb|1ASS| Apical Domain Of The Chaperonin From Thermoplas... 23 6.1
pdb|1O0X|A Chain A, Crystal Structure Of Methionine Aminope... 23 6.1
pdb|1A1R|B Chain B, Hcv Ns3 Protease Domain:ns4a Peptide Co... 23 6.1
pdb|1JT3|A Chain A, Human Acidic Fibroblast Growth Factor. ... 23 6.1
pdb|1J6X|B Chain B, Crystal Structure Of Helicobacter Pylor... 23 6.1
pdb|1L3W|A Chain A, C-Cadherin Ectodomain 23 6.1
pdb|1HUV|A Chain A, Crystal Structure Of A Soluble Mutant O... 23 6.1
pdb|1J5V|A Chain A, Crystal Structure Of 2-Keto-3-Deoxygluc... 23 6.1
pdb|1J5U|A Chain A, Crystal Structure Of Conserved Hypothet... 23 6.1
pdb|1O0U|A Chain A, Crystal Structure Of Putative Glycerate... 23 6.1
pdb|1JQZ|A Chain A, Human Acidic Fibroblast Growth Factor. ... 23 6.1
pdb|1GKZ|A Chain A, Branched-Chain Alpha-Ketoacid Dehydroge... 23 6.1
pdb|1TOA|A Chain A, Periplasmic Zinc Binding Protein Troa F... 23 6.1
pdb|1HXV|A Chain A, Ppiase Domain Of The Mycoplasma Genital... 23 6.1
pdb|1KKM|H Chain H, L.Casei HprkP IN COMPLEX WITH B.SUBTILI... 23 6.1
pdb|1HES|A Chain A, Mu2 Adaptin Subunit (Ap50) Of Ap2 Adapt... 23 6.1
pdb|1D7Q|B Chain B, Human Translation Initiation Factor Eif1a 23 6.1
pdb|1L6N|A Chain A, Structure Of The N-Terminal 283-Residue... 23 6.1
pdb|1K28|A Chain A, The Structure Of The Bacteriophage T4 C... 23 6.1
pdb|1A1R|A Chain A, Hcv Ns3 Protease Domain:ns4a Peptide Co... 23 6.1
pdb|1KN6|A Chain A, Solution Structure Of The Mouse Prohorm... 23 6.1
pdb|1DE5|A Chain A, L-Rhamnose Isomerase >gi|10120982|pdb|1... 23 6.1
pdb|1G7K|A Chain A, Crystal Structure Of Dsred, A Red Fluor... 23 6.1
pdb|2ERK| Phosphorylated Map Kinase Erk2 23 6.1
pdb|2BSP|A Chain A, Bacillus Subtilis Pectate Lyase R279k M... 23 7.9
pdb|1BN8|A Chain A, Bacillus Subtilis Pectate Lyase 23 7.9
pdb|1KO6|B Chain B, Crystal Structure Of C-Terminal Autopro... 23 7.9
>pdb|1QB3|B Chain B, Crystal Structure Of The Cell Cycle Regulatory Protein
Cks1
pdb|1QB3|A Chain A, Crystal Structure Of The Cell Cycle Regulatory Protein
Cks1
pdb|1QB3|C Chain C, Crystal Structure Of The Cell Cycle Regulatory Protein
Cks1
Length = 150
Score = 37.7 bits (86), Expect = 2e-04
Identities = 21/57 (36%), Positives = 27/57 (46%)
Query: 10 QQANSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQ 66
Q +H+ H H ++ A+ A A QQ QQQQQQQ QQQQ + Q
Sbjct: 81 QSLGWEHYECHAPEPHILLFKRPLNYEAELRAATAAAQQQQQQQQQQQQQQQQHQTQ 137
Score = 35.8 bits (81), Expect = 0.001
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 41 AEQQAEQQAQQQQQQQAHQQQQQKAQQQNQ 70
AE +A A QQQQQQ QQQQQ+ Q Q Q
Sbjct: 108 AELRAATAAAQQQQQQQQQQQQQQQQHQTQ 137
Score = 32.7 bits (73), Expect = 0.008
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 11 QANSQHHHHHHAHHHHY--YGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQQ 68
Q+ H+ HA H + ++ + A A+QQ QQQQQQQ QQQ Q
Sbjct: 81 QSLGWEHYECHAPEPHILLFKRPLNYEAELRAATAAAQQQQQQQQQQQQQQQQHQTQSIS 140
Query: 69 N 69
N
Sbjct: 141 N 141
Score = 31.2 bits (69), Expect = 0.022
Identities = 17/47 (36%), Positives = 24/47 (50%)
Query: 24 HHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQQNQ 70
H+ + E H ++ +AE +A QQ QQQQQ+ QQQ Q
Sbjct: 87 HYECHAPEPHILLFKRPLNYEAELRAATAAAQQQQQQQQQQQQQQQQ 133
Score = 30.4 bits (67), Expect = 0.038
Identities = 15/30 (50%), Positives = 16/30 (53%)
Query: 41 AEQQAEQQAQQQQQQQAHQQQQQKAQQQNQ 70
A Q +QQ QQQQQQQ Q Q Q Q
Sbjct: 115 AAAQQQQQQQQQQQQQQQQHQTQSISNDMQ 144
Score = 27.3 bits (59), Expect = 0.32
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 38 QQHAEQQAEQQAQQQQQQQAHQQQQQKAQQ 67
QQ +QQ +QQ QQQ Q Q+ Q Q
Sbjct: 119 QQQQQQQQQQQQQQQHQTQSISNDMQVPPQ 148
Score = 23.1 bits (48), Expect = 6.1
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 2 AHHEQQQQQQANSQHHHH 19
A +QQQQQQ Q H
Sbjct: 117 AQQQQQQQQQQQQQQQQH 134
>pdb|1D1D|A Chain A, Nmr Solution Structure Of The Capsid Protein From Rous
Sarcoma Virus
Length = 262
Score = 35.0 bits (79), Expect = 0.002
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 17 HHHHHAHHHHYYGGEHHHHN 36
HHHHH HHHH G HN
Sbjct: 2 HHHHHHHHHHSSGHIEGRHN 21
Score = 28.1 bits (61), Expect = 0.19
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 10/22 (45%)
Query: 16 HHHHHHAHHHHYYGGEHHHHNA 37
HHHHHH HHHH++
Sbjct: 2 HHHHHH----------HHHHSS 13
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 30 GEHHHHNAQQHAEQQAE 46
G HHHH+ H+ E
Sbjct: 1 GHHHHHHHHHHSSGHIE 17
>pdb|1EY2|A Chain A, Human Homogentisate Dioxygenase With Fe(Ii)
pdb|1EYB|A Chain A, Crystal Structure Of Apo Human Homogentisate Dioxygenase
Length = 471
Score = 33.9 bits (76), Expect = 0.003
Identities = 14/30 (46%), Positives = 16/30 (52%), Gaps = 3/30 (10%)
Query: 17 HHHHHAHHHHYYGGEHHHHNAQQHAEQQAE 46
HHHHH HHHH G H + +H AE
Sbjct: 3 HHHHHHHHHHSSG---HIDDDDKHXGSXAE 29
>pdb|1JXI|A Chain A, 4-Amino-5-Hydroxymethyl-2-Methylpyrimidine Phosphate
Kinase From Salmonella Typhimurium Complexed With
4-Amino-5- Hydroxymethyl-2-Methylpyrimidine
pdb|1JXI|B Chain B, 4-Amino-5-Hydroxymethyl-2-Methylpyrimidine Phosphate
Kinase From Salmonella Typhimurium Complexed With
4-Amino-5- Hydroxymethyl-2-Methylpyrimidine
pdb|1JXH|A Chain A, 4-Amino-5-Hydroxymethyl-2-Methylpyrimidine Phosphate
Kinase From Salmonella Typhimurium
pdb|1JXH|B Chain B, 4-Amino-5-Hydroxymethyl-2-Methylpyrimidine Phosphate
Kinase From Salmonella Typhimurium
Length = 288
Score = 33.1 bits (74), Expect = 0.006
Identities = 10/15 (66%), Positives = 11/15 (72%)
Query: 18 HHHHAHHHHYYGGEH 32
HHHH HHHH+ G H
Sbjct: 3 HHHHHHHHHHSSGYH 17
Score = 32.3 bits (72), Expect = 0.010
Identities = 10/13 (76%), Positives = 10/13 (76%)
Query: 17 HHHHHAHHHHYYG 29
HHHHH HHHH G
Sbjct: 3 HHHHHHHHHHSSG 15
Score = 30.0 bits (66), Expect = 0.050
Identities = 10/19 (52%), Positives = 11/19 (57%)
Query: 16 HHHHHHAHHHHYYGGEHHH 34
HHHHHH HH Y + H
Sbjct: 4 HHHHHHHHHSSGYHIQGRH 22
Score = 30.0 bits (66), Expect = 0.050
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 19 HHHAHHHHYYGGEHH 33
HHH HHHH++ +H
Sbjct: 3 HHHHHHHHHHSSGYH 17
Score = 29.3 bits (64), Expect = 0.085
Identities = 13/37 (35%), Positives = 15/37 (40%), Gaps = 9/37 (24%)
Query: 1 MAHHEQQQQQQANSQHHHHHHAHHHHYYGGEHHHHNA 37
M HH HHHHHH+ +H G NA
Sbjct: 1 MGHHHH---------HHHHHHSSGYHIQGRHMQRINA 28
Score = 28.9 bits (63), Expect = 0.11
Identities = 11/28 (39%), Positives = 16/28 (56%), Gaps = 5/28 (17%)
Query: 21 HAHHHHYYGGEHHHHNAQQHAEQQAEQQ 48
H HHHH HHHH++ H + + Q+
Sbjct: 3 HHHHHH-----HHHHSSGYHIQGRHMQR 25
>pdb|1D0H|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With
N-Acetyl- Galactosamine
Length = 469
Score = 33.1 bits (74), Expect = 0.006
Identities = 10/15 (66%), Positives = 11/15 (72%)
Query: 16 HHHHHHAHHHHYYGG 30
H HHHH HHHH+ G
Sbjct: 3 HGHHHHHHHHHHSSG 17
Score = 32.7 bits (73), Expect = 0.008
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 17 HHHHHAHHHHYYGGEHHHH 35
HHHHH HHHH G H
Sbjct: 5 HHHHHHHHHHSSGHIEGRH 23
Score = 31.6 bits (70), Expect = 0.017
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 17 HHHHHAHHHHYYGGEH 32
H HHH HHHH++ H
Sbjct: 3 HGHHHHHHHHHHSSGH 18
Score = 29.3 bits (64), Expect = 0.085
Identities = 10/23 (43%), Positives = 12/23 (51%)
Query: 16 HHHHHHAHHHHYYGGEHHHHNAQ 38
HHHHHH H + G H N +
Sbjct: 7 HHHHHHHHSSGHIEGRHMLDNEE 29
Score = 29.3 bits (64), Expect = 0.085
Identities = 11/23 (47%), Positives = 13/23 (55%), Gaps = 5/23 (21%)
Query: 20 HHAHHHHYYGGEHHHHNAQQHAE 42
H HHHH HHHH++ H E
Sbjct: 3 HGHHHHH-----HHHHHSSGHIE 20
Score = 28.9 bits (63), Expect = 0.11
Identities = 8/12 (66%), Positives = 9/12 (74%)
Query: 13 NSQHHHHHHAHH 24
+ HHHHHH HH
Sbjct: 3 HGHHHHHHHHHH 14
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 30 GEHHHHNAQQHAEQQAE 46
G HHHH+ H+ E
Sbjct: 4 GHHHHHHHHHHSSGHIE 20
>pdb|1JPK|A Chain A, Gly156asp Mutant Of Human Urod, Human Uroporphyrinogen
Iii Decarboxylase
Length = 388
Score = 33.1 bits (74), Expect = 0.006
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Query: 17 HHHHHAHHHHYYG---GEHHHHN 36
HHHHH HHHH G G H N
Sbjct: 3 HHHHHHHHHHSSGHIEGRHMEAN 25
Score = 28.1 bits (61), Expect = 0.19
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 10/22 (45%)
Query: 16 HHHHHHAHHHHYYGGEHHHHNA 37
HHHHHH HHHH++
Sbjct: 3 HHHHHH----------HHHHSS 14
Score = 23.1 bits (48), Expect = 6.1
Identities = 8/20 (40%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
Query: 23 HHHHYYGGEHHHHNAQQHAE 42
HHHH++ HH++ H E
Sbjct: 4 HHHHHH-----HHHSSGHIE 18
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 30 GEHHHHNAQQHAEQQAE 46
G HHHH+ H+ E
Sbjct: 2 GHHHHHHHHHHSSGHIE 18
>pdb|1JPH|A Chain A, Ile260thr Mutant Of Human Urod, Human Uroporphyrinogen
Iii Decarboxylase
Length = 388
Score = 33.1 bits (74), Expect = 0.006
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Query: 17 HHHHHAHHHHYYG---GEHHHHN 36
HHHHH HHHH G G H N
Sbjct: 3 HHHHHHHHHHSSGHIEGRHMEAN 25
Score = 28.1 bits (61), Expect = 0.19
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 10/22 (45%)
Query: 16 HHHHHHAHHHHYYGGEHHHHNA 37
HHHHHH HHHH++
Sbjct: 3 HHHHHH----------HHHHSS 14
Score = 23.1 bits (48), Expect = 6.1
Identities = 8/20 (40%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
Query: 23 HHHHYYGGEHHHHNAQQHAE 42
HHHH++ HH++ H E
Sbjct: 4 HHHHHH-----HHHSSGHIE 18
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 30 GEHHHHNAQQHAEQQAE 46
G HHHH+ H+ E
Sbjct: 2 GHHHHHHHHHHSSGHIE 18
>pdb|1JPI|A Chain A, Phe232leu Mutant Of Human Urod, Human Uroporphyrinogen
Iii Decarboxylase
Length = 388
Score = 33.1 bits (74), Expect = 0.006
Identities = 13/23 (56%), Positives = 13/23 (56%), Gaps = 3/23 (13%)
Query: 17 HHHHHAHHHHYYG---GEHHHHN 36
HHHHH HHHH G G H N
Sbjct: 3 HHHHHHHHHHSSGHIEGRHMEAN 25
Score = 28.1 bits (61), Expect = 0.19
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 10/22 (45%)
Query: 16 HHHHHHAHHHHYYGGEHHHHNA 37
HHHHHH HHHH++
Sbjct: 3 HHHHHH----------HHHHSS 14
Score = 23.1 bits (48), Expect = 6.1
Identities = 8/20 (40%), Positives = 12/20 (60%), Gaps = 5/20 (25%)
Query: 23 HHHHYYGGEHHHHNAQQHAE 42
HHHH++ HH++ H E
Sbjct: 4 HHHHHH-----HHHSSGHIE 18
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 30 GEHHHHNAQQHAEQQAE 46
G HHHH+ H+ E
Sbjct: 2 GHHHHHHHHHHSSGHIE 18
>pdb|1K8W|A Chain A, Crystal Structure Of The E. Coli Pseudouridine Synthase
Trub Bound To A T Stem-Loop Rna
Length = 327
Score = 32.7 bits (73), Expect = 0.008
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 17 HHHHHAHHHHYYGGEHHHH 35
HHHHH HHHH G H
Sbjct: 3 HHHHHHHHHHSSGHIEGRH 21
Score = 28.1 bits (61), Expect = 0.19
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 10/22 (45%)
Query: 16 HHHHHHAHHHHYYGGEHHHHNA 37
HHHHHH HHHH++
Sbjct: 3 HHHHHH----------HHHHSS 14
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 30 GEHHHHNAQQHAEQQAE 46
G HHHH+ H+ E
Sbjct: 2 GHHHHHHHHHHSSGHIE 18
>pdb|1JR2|A Chain A, Structure Of Uroporphyrinogen Iii Synthase
pdb|1JR2|B Chain B, Structure Of Uroporphyrinogen Iii Synthase
Length = 286
Score = 32.7 bits (73), Expect = 0.008
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 17 HHHHHAHHHHYYGGEHHHH 35
HHHHH HHHH G H
Sbjct: 3 HHHHHHHHHHSSGHIEGRH 21
Score = 28.1 bits (61), Expect = 0.19
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 10/22 (45%)
Query: 16 HHHHHHAHHHHYYGGEHHHHNA 37
HHHHHH HHHH++
Sbjct: 3 HHHHHH----------HHHHSS 14
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 30 GEHHHHNAQQHAEQQAE 46
G HHHH+ H+ E
Sbjct: 2 GHHHHHHHHHHSSGHIE 18
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 31.6 bits (70), Expect = 0.017
Identities = 9/10 (90%), Positives = 9/10 (90%)
Query: 16 HHHHHHAHHH 25
HHHHHH HHH
Sbjct: 2 HHHHHHHHHH 11
Score = 31.6 bits (70), Expect = 0.017
Identities = 9/10 (90%), Positives = 9/10 (90%)
Query: 17 HHHHHAHHHH 26
HHHHH HHHH
Sbjct: 2 HHHHHHHHHH 11
Score = 29.3 bits (64), Expect = 0.085
Identities = 8/10 (80%), Positives = 9/10 (90%)
Query: 18 HHHHAHHHHY 27
HHHH HHHH+
Sbjct: 2 HHHHHHHHHH 11
Score = 26.9 bits (58), Expect = 0.42
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 19 HHHAHHHHYY 28
HHH HHHH++
Sbjct: 2 HHHHHHHHHH 11
>pdb|1HCD| Hisactophilin (Nmr, 1 Structure)
pdb|1HCE| Hisactophilin (Nmr, Minimized Average Structure)
Length = 118
Score = 31.2 bits (69), Expect = 0.022
Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 3/38 (7%)
Query: 1 MAHHEQQQQQQANSQHHHHH---HAHHHHYYGGEHHHH 35
++HH + +HH HHHHY +HH H
Sbjct: 63 LSHHLHGDHSLFHLEHHGGKVSIKGHHHHYISADHHGH 100
Score = 29.3 bits (64), Expect = 0.085
Identities = 13/36 (36%), Positives = 18/36 (49%), Gaps = 2/36 (5%)
Query: 3 HHEQQQQQQANSQHHHHHHA--HHHHYYGGEHHHHN 36
H E + + HHHH+ + HH H EHH H+
Sbjct: 75 HLEHHGGKVSIKGHHHHYISADHHGHVSTKEHHDHD 110
Score = 26.9 bits (58), Expect = 0.42
Identities = 8/16 (50%), Positives = 10/16 (62%)
Query: 17 HHHHHAHHHHYYGGEH 32
HH HH HH H++ H
Sbjct: 24 HHGHHDHHTHFHVENH 39
Score = 25.4 bits (54), Expect = 1.2
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 2 AHHEQQQQQQANSQHHHHHHAHHHHYYGGEHH 33
+HH + + HH H HH ++ E+H
Sbjct: 8 SHHGHFLSAEGEAVKTHHGHHDHHTHFHVENH 39
Score = 25.4 bits (54), Expect = 1.2
Identities = 14/47 (29%), Positives = 21/47 (43%), Gaps = 9/47 (19%)
Query: 10 QQANSQHHHH--HHAHHHHYYGGE-----HHHH--NAQQHAEQQAEQ 47
+Q HH H H H ++GG+ HHHH +A H ++
Sbjct: 59 KQVYLSHHLHGDHSLFHLEHHGGKVSIKGHHHHYISADHHGHVSTKE 105
>pdb|1KXU| Cyclin H, A Positive Regulatory Subunit Of Cdk Activating Kinase
Length = 333
Score = 30.4 bits (67), Expect = 0.038
Identities = 9/27 (33%), Positives = 19/27 (70%)
Query: 22 AHHHHYYGGEHHHHNAQQHAEQQAEQQ 48
+HHHH++G +H+ + ++H +E+Q
Sbjct: 2 SHHHHHHGSMYHNSSQKRHWTFSSEEQ 28
Score = 26.2 bits (56), Expect = 0.72
Identities = 11/37 (29%), Positives = 15/37 (39%)
Query: 18 HHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQ 54
HHHH H Y+ H EQ A +A ++
Sbjct: 3 HHHHHHGSMYHNSSQKRHWTFSSEEQLARLRADANRK 39
Score = 25.0 bits (53), Expect = 1.6
Identities = 8/26 (30%), Positives = 15/26 (56%)
Query: 14 SQHHHHHHAHHHHYYGGEHHHHNAQQ 39
S HHHHH + +H+ H ++++
Sbjct: 2 SHHHHHHGSMYHNSSQKRHWTFSSEE 27
Score = 23.1 bits (48), Expect = 6.1
Identities = 8/26 (30%), Positives = 11/26 (41%)
Query: 32 HHHHNAQQHAEQQAEQQAQQQQQQQA 57
HHHH + H Q ++Q A
Sbjct: 5 HHHHGSMYHNSSQKRHWTFSSEEQLA 30
>pdb|1LW6|E Chain E, Crystal Structure Of The Complex Of Subtilisin Bpn' With
Chymotrypsin Inhibitor 2 At 1.5 Angstrom Resolution
Length = 281
Score = 28.1 bits (61), Expect = 0.19
Identities = 9/11 (81%), Positives = 10/11 (90%)
Query: 11 QANSQHHHHHH 21
QA +QHHHHHH
Sbjct: 271 QAAAQHHHHHH 281
>pdb|1GV3|A Chain A, The 2.0 Angstrom Resolution Structure Of The Catalytic
Portion Of A Cyanobacterial Membrane-Bound Manganese
Superoxide Dismutase
pdb|1GV3|B Chain B, The 2.0 Angstrom Resolution Structure Of The Catalytic
Portion Of A Cyanobacterial Membrane-Bound Manganese
Superoxide Dismutase
Length = 248
Score = 28.1 bits (61), Expect = 0.19
Identities = 9/14 (64%), Positives = 11/14 (78%)
Query: 7 QQQQQANSQHHHHH 20
Q +Q+NS HHHHH
Sbjct: 235 QASRQSNSHHHHHH 248
Score = 25.4 bits (54), Expect = 1.2
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 5 EQQQQQQANSQHHHHHHAHH 24
E ++ QA+ Q + HHH HH
Sbjct: 229 EINRRTQASRQSNSHHHHHH 248
>pdb|1JI7|A Chain A, Crystal Structure Of Tel Sam Polymer
pdb|1JI7|B Chain B, Crystal Structure Of Tel Sam Polymer
pdb|1JI7|C Chain C, Crystal Structure Of Tel Sam Polymer
Length = 89
Score = 27.3 bits (59), Expect = 0.32
Identities = 9/17 (52%), Positives = 9/17 (52%)
Query: 10 QQANSQHHHHHHAHHHH 26
Q Q HHHH HH H
Sbjct: 72 QHILKQRDHHHHHHHRH 88
Score = 25.8 bits (55), Expect = 0.93
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 9 QQQANSQHHHHHHAHHH 25
Q + HHHHH H H
Sbjct: 72 QHILKQRDHHHHHHHRH 88
Score = 25.8 bits (55), Expect = 0.93
Identities = 9/21 (42%), Positives = 10/21 (46%)
Query: 4 HEQQQQQQANSQHHHHHHAHH 24
+E Q HHHHHH H
Sbjct: 68 YELLQHILKQRDHHHHHHHRH 88
>pdb|1BW8|A Chain A, Mu2 Adaptin Subunit (Ap50) Of Ap2 Adaptor (Second
Domain), Complexed With Egfr Internalization Peptide
Fyralm
Length = 321
Score = 27.3 bits (59), Expect = 0.32
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 24 HHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQQNQQ 71
HHH HHH N++ A + Q + Q Q ++Q Q Q Q
Sbjct: 2 HHH-----HHHQNSETGALKTFITQQGIKSQHQTKEEQSQITSQVTGQ 44
Score = 24.6 bits (52), Expect = 2.1
Identities = 11/35 (31%), Positives = 16/35 (45%)
Query: 19 HHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQ 53
HHH HH + G QQ + Q + + +Q Q
Sbjct: 2 HHHHHHQNSETGALKTFITQQGIKSQHQTKEEQSQ 36
>pdb|1M0V|A Chain A, Nmr Structure Of The Type Iii Secretory Domain Of Yersinia
Yoph Complexed With The Skap-Hom Phospho-Peptide
N-Acetyl- Depyddpf-Nh2
pdb|1K46|A Chain A, Crystal Structure Of The Type Iii Secretory Domain Of
Yersinia Yoph Reveals A Domain-Swapped Dimer
Length = 136
Score = 26.9 bits (58), Expect = 0.42
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 7 QQQQQANSQHHHHHH 21
+Q+ A HHHHHH
Sbjct: 122 RQESGARGSHHHHHH 136
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/15 (46%), Positives = 9/15 (59%)
Query: 6 QQQQQQANSQHHHHH 20
+Q+ S HHHHH
Sbjct: 122 RQESGARGSHHHHHH 136
Score = 22.7 bits (47), Expect = 7.9
Identities = 7/19 (36%), Positives = 12/19 (62%)
Query: 5 EQQQQQQANSQHHHHHHAH 23
E +Q++ ++ HHHH H
Sbjct: 118 EAALRQESGARGSHHHHHH 136
>pdb|1E5W|A Chain A, Structure Of Isolated Ferm Domain And First Long Helix Of
Moesin
Length = 346
Score = 26.9 bits (58), Expect = 0.42
Identities = 10/42 (23%), Positives = 24/42 (56%)
Query: 30 GEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQQNQQ 71
G H + ++ + QQ + Q +++ HQ+Q ++A +N++
Sbjct: 286 GNHELYMRRRKPDTIEVQQMKAQAREEKHQKQMERAMLENEK 327
>pdb|1HY5|B Chain B, Crystal Structure Of The Catalytic Domain Of Yope-Yersinia
Pestis Gap Effector Protein.
pdb|1HY5|A Chain A, Crystal Structure Of The Catalytic Domain Of Yope-Yersinia
Pestis Gap Effector Protein
Length = 136
Score = 26.9 bits (58), Expect = 0.42
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 6 QQQQQQANSQHHHHHH 21
QQ Q+ + HHHHHH
Sbjct: 121 QQXQKLLSLXHHHHHH 136
>pdb|1E8Y|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
pdb|1E8Z|A Chain A, Structure Determinants Of Phosphoinositide 3-Kinase
Inhibition By Wortmannin, Ly294002, Quercetin, Myricetin
And Staurosporine
Length = 966
Score = 26.6 bits (57), Expect = 0.55
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 8 QQQQANSQHHHHHH 21
+Q + +S HHHHHH
Sbjct: 953 KQGEKHSAHHHHHH 966
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/14 (42%), Positives = 11/14 (77%)
Query: 7 QQQQQANSQHHHHH 20
+Q ++ ++ HHHHH
Sbjct: 953 KQGEKHSAHHHHHH 966
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 20 HHAHHHHYY 28
H AHHHH++
Sbjct: 958 HSAHHHHHH 966
>pdb|1HE8|A Chain A, Ras G12v - Pi 3-Kinase Gamma Complex
Length = 965
Score = 26.6 bits (57), Expect = 0.55
Identities = 8/14 (57%), Positives = 11/14 (78%)
Query: 8 QQQQANSQHHHHHH 21
+Q + +S HHHHHH
Sbjct: 952 KQGEKHSAHHHHHH 965
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/14 (42%), Positives = 11/14 (77%)
Query: 7 QQQQQANSQHHHHH 20
+Q ++ ++ HHHHH
Sbjct: 952 KQGEKHSAHHHHHH 965
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 20 HHAHHHHYY 28
H AHHHH++
Sbjct: 957 HSAHHHHHH 965
>pdb|1LBD| Ligand-Binding Domain Of The Human Nuclear Receptor Rxr-Alpha
Length = 282
Score = 26.6 bits (57), Expect = 0.55
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 2/54 (3%)
Query: 14 SQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQ 67
S HHHHHH+ G H A Q Q+ + + + + + + + ++
Sbjct: 3 SSHHHHHHSSGLVPRGS--HKREAVQEERQRGKDRNENEVESTSSANEDMPVER 54
Score = 22.7 bits (47), Expect = 7.9
Identities = 9/42 (21%), Positives = 22/42 (51%), Gaps = 6/42 (14%)
Query: 29 GGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQQNQ 70
G HHHH+ + + +++A Q+++Q+ + +N+
Sbjct: 2 GSSHHHHH------HSSGLVPRGSHKREAVQEERQRGKDRNE 37
>pdb|1KKX|A Chain A, Solution Structure Of The Dna-Binding Domain Of Adr6
pdb|1KN5|A Chain A, Solution Structure Of Arid Domain Of Adr6 From
Saccharomyces Cerevisiae
Length = 123
Score = 26.2 bits (56), Expect = 0.72
Identities = 7/18 (38%), Positives = 11/18 (60%)
Query: 11 QANSQHHHHHHAHHHHYY 28
+ + HHHHHH ++ Y
Sbjct: 2 RGSGSHHHHHHGSNNKQY 19
>pdb|1K7L|A Chain A, The 2.5 Angstrom Resolution Crystal Structure Of The
Human Pparalpha Ligand Binding Domain Bound With
Gw409544 And A Co-Activator Peptide.
pdb|1K7L|C Chain C, The 2.5 Angstrom Resolution Crystal Structure Of The
Human Pparalpha Ligand Binding Domain Bound With
Gw409544 And A Co-Activator Peptide.
pdb|1K7L|E Chain E, The 2.5 Angstrom Resolution Crystal Structure Of The
Human Pparalpha Ligand Binding Domain Bound With
Gw409544 And A Co-Activator Peptide.
pdb|1K7L|G Chain G, The 2.5 Angstrom Resolution Crystal Structure Of The
Human Pparalpha Ligand Binding Domain Bound With
Gw409544 And A Co-Activator Peptide
Length = 288
Score = 26.2 bits (56), Expect = 0.72
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 16 HHHHHHAHH 24
HHHHHH H
Sbjct: 5 HHHHHHGEH 13
>pdb|1J5Y|A Chain A, Crystal Structure Of Transcriptional Regulator (Tm1602)
From Thermotoga Maritima At 2.3 A Resolution
Length = 187
Score = 26.2 bits (56), Expect = 0.72
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 16 HHHHHHAH 23
HHHHHH H
Sbjct: 7 HHHHHHXH 14
>pdb|1JCF|A Chain A, Mreb From Thermotoga Maritima, Trigonal
pdb|1JCG|A Chain A, Mreb From Thermotoga Maritima, Amppnp
Length = 344
Score = 25.8 bits (55), Expect = 0.93
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 10 QQANSQHHHHHH 21
Q A HHHHHH
Sbjct: 333 QGAGGSHHHHHH 344
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor
pdb|1G8X|B Chain B, Structure Of A Genetically Engineered Molecular Motor
Length = 1010
Score = 25.8 bits (55), Expect = 0.93
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 5 EQQQQQQANSQHHHHHH 21
E ++ Q+ HHHHHH
Sbjct: 993 ELERLQKIEDLHHHHHH 1009
Score = 23.9 bits (50), Expect = 3.6
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 6 QQQQQQANSQHHHHHH 21
++ Q+ + HHHHHH
Sbjct: 995 ERLQKIEDLHHHHHHH 1010
>pdb|1L3A|C Chain C, Structure Of The Plant Transcriptional Regulator Pbf-2
Length = 182
Score = 25.8 bits (55), Expect = 0.93
Identities = 8/17 (47%), Positives = 11/17 (64%)
Query: 5 EQQQQQQANSQHHHHHH 21
E + + N +HHHHHH
Sbjct: 166 ESGAELEWNLEHHHHHH 182
>pdb|1B6U| Crystal Structure Of The Human Killer Cell Inhibitory Receptor
(Kir2dl3) Specific For Hla-Cw3 Related Alleles
Length = 257
Score = 25.8 bits (55), Expect = 0.93
Identities = 7/12 (58%), Positives = 10/12 (83%)
Query: 11 QANSQHHHHHHA 22
+ +S HHHHHH+
Sbjct: 244 RGSSSHHHHHHS 255
>pdb|1KZG|A Chain A, Dbscdc42(Y889f)
pdb|1KZG|C Chain C, Dbscdc42(Y889f)
Length = 353
Score = 25.8 bits (55), Expect = 0.93
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 2 AHHEQQQQQQANSQHHHHHH 21
A + +Q + +HHHHHH
Sbjct: 334 ASQHRALEQSHSLEHHHHHH 353
Score = 25.4 bits (54), Expect = 1.2
Identities = 9/21 (42%), Positives = 11/21 (51%)
Query: 6 QQQQQQANSQHHHHHHAHHHH 26
+ Q +A Q H H HHHH
Sbjct: 333 EASQHRALEQSHSLEHHHHHH 353
Score = 24.3 bits (51), Expect = 2.7
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 2 AHHEQQQQQQANSQHHHHHHAHHH 25
A E Q + H HH HHH
Sbjct: 330 ACREASQHRALEQSHSLEHHHHHH 353
>pdb|1EZK|A Chain A, Crystal Structure Of Recombinant Tryparedoxin I
Length = 153
Score = 25.8 bits (55), Expect = 0.93
Identities = 9/17 (52%), Positives = 11/17 (63%)
Query: 5 EQQQQQQANSQHHHHHH 21
EQ + A +HHHHHH
Sbjct: 137 EQFPWKDAPLEHHHHHH 153
>pdb|1LB1|A Chain A, Crystal Structure Of The Dbl And Pleckstrin Homology
Domains Of Dbs In Complex With Rhoa
pdb|1LB1|C Chain C, Crystal Structure Of The Dbl And Pleckstrin Homology
Domains Of Dbs In Complex With Rhoa
pdb|1LB1|E Chain E, Crystal Structure Of The Dbl And Pleckstrin Homology
Domains Of Dbs In Complex With Rhoa
pdb|1LB1|G Chain G, Crystal Structure Of The Dbl And Pleckstrin Homology
Domains Of Dbs In Complex With Rhoa
Length = 353
Score = 25.8 bits (55), Expect = 0.93
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 2 AHHEQQQQQQANSQHHHHHH 21
A + +Q + +HHHHHH
Sbjct: 334 ASQHRALEQSHSLEHHHHHH 353
Score = 25.4 bits (54), Expect = 1.2
Identities = 9/21 (42%), Positives = 11/21 (51%)
Query: 6 QQQQQQANSQHHHHHHAHHHH 26
+ Q +A Q H H HHHH
Sbjct: 333 EASQHRALEQSHSLEHHHHHH 353
Score = 24.3 bits (51), Expect = 2.7
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 2 AHHEQQQQQQANSQHHHHHHAHHH 25
A E Q + H HH HHH
Sbjct: 330 ACREASQHRALEQSHSLEHHHHHH 353
>pdb|1JCE|A Chain A, Mreb From Thermotoga Maritima
Length = 344
Score = 25.8 bits (55), Expect = 0.93
Identities = 8/12 (66%), Positives = 8/12 (66%)
Query: 10 QQANSQHHHHHH 21
Q A HHHHHH
Sbjct: 333 QGAGGSHHHHHH 344
>pdb|1KZ7|A Chain A, Crystal Structure Of The DhPH FRAGMENT OF MURINE DBS IN
Complex With The Placental Isoform Of Human Cdc42
pdb|1KZ7|C Chain C, Crystal Structure Of The DhPH FRAGMENT OF MURINE DBS IN
Complex With The Placental Isoform Of Human Cdc42
Length = 353
Score = 25.8 bits (55), Expect = 0.93
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 2 AHHEQQQQQQANSQHHHHHH 21
A + +Q + +HHHHHH
Sbjct: 334 ASQHRALEQSHSLEHHHHHH 353
Score = 25.4 bits (54), Expect = 1.2
Identities = 9/21 (42%), Positives = 11/21 (51%)
Query: 6 QQQQQQANSQHHHHHHAHHHH 26
+ Q +A Q H H HHHH
Sbjct: 333 EASQHRALEQSHSLEHHHHHH 353
Score = 24.3 bits (51), Expect = 2.7
Identities = 9/24 (37%), Positives = 10/24 (41%)
Query: 2 AHHEQQQQQQANSQHHHHHHAHHH 25
A E Q + H HH HHH
Sbjct: 330 ACREASQHRALEQSHSLEHHHHHH 353
>pdb|1ICI|A Chain A, Crystal Structure Of A Sir2 Homolog-Nad Complex
pdb|1ICI|B Chain B, Crystal Structure Of A Sir2 Homolog-Nad Complex
Length = 256
Score = 25.8 bits (55), Expect = 0.93
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 16 HHHHHHAHH 24
HHHHHH H
Sbjct: 3 HHHHHHGSH 11
Score = 24.3 bits (51), Expect = 2.7
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 14 SQHHHHHHAH 23
S HHHHH +H
Sbjct: 2 SHHHHHHGSH 11
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/15 (40%), Positives = 10/15 (66%)
Query: 30 GEHHHHNAQQHAEQQ 44
G HHHH+ H +++
Sbjct: 1 GSHHHHHHGSHMDEK 15
>pdb|1JPE|A Chain A, Crystal Structure Of Dsbd-Alpha; The N-Terminal Domain
Of Dsbd
Length = 151
Score = 25.8 bits (55), Expect = 0.93
Identities = 7/13 (53%), Positives = 9/13 (68%)
Query: 16 HHHHHHAHHHHYY 28
HHHHHH + Y+
Sbjct: 5 HHHHHHGSENLYF 17
Score = 24.3 bits (51), Expect = 2.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 14 SQHHHHHHAHHHHYYGG 30
S HHHHH + + ++ G
Sbjct: 4 SHHHHHHGSENLYFQSG 20
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 22 AHHHHYYGGEH 32
+HHHH++G E+
Sbjct: 4 SHHHHHHGSEN 14
>pdb|1FXZ|A Chain A, Crystal Structure Of Soybean Proglycinin A1ab1b Homotrimer
pdb|1FXZ|B Chain B, Crystal Structure Of Soybean Proglycinin A1ab1b Homotrimer
pdb|1FXZ|C Chain C, Crystal Structure Of Soybean Proglycinin A1ab1b Homotrimer
Length = 476
Score = 25.8 bits (55), Expect = 0.93
Identities = 11/30 (36%), Positives = 18/30 (59%)
Query: 41 AEQQAEQQAQQQQQQQAHQQQQQKAQQQNQ 70
A Q ++ + QQ+Q HQ Q+ K QQ+ +
Sbjct: 166 AGNQEQEFLKYQQEQGGHQSQKGKHQQEEE 195
>pdb|1MFQ|C Chain C, Crystal Structure Analysis Of A Ternary S-Domain Complex
Of Human Signal Recognition Particle
Length = 129
Score = 25.8 bits (55), Expect = 0.93
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 16 HHHHHHAH 23
HHHHHH H
Sbjct: 5 HHHHHHKH 12
>pdb|1LSH|A Chain A, Lipid-Protein Interactions In Lipovitellin
Length = 1056
Score = 25.4 bits (54), Expect = 1.2
Identities = 11/27 (40%), Positives = 16/27 (58%)
Query: 45 AEQQAQQQQQQQAHQQQQQKAQQQNQQ 71
++QQ Q QQQ HQ Q +A+ Q+
Sbjct: 940 SQQQQQPHHQQQPHQHGQDQARAAYQR 966
Score = 24.6 bits (52), Expect = 2.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 44 QAEQQAQQQQQQQAHQQQQQKAQQQ 68
Q +QQ QQQ H Q Q +A Q
Sbjct: 941 QQQQQPHHQQQPHQHGQDQARAAYQ 965
>pdb|1JL5|A Chain A, Novel Molecular Architecture Of Yopm-A Leucine-Rich
Effector Protein From Yersinia Pestis
pdb|1G9U|A Chain A, Crystal Structure Of Yopm-Leucine Rich Effector Protein
From Yersinia Pestis
Length = 454
Score = 25.4 bits (54), Expect = 1.2
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 2 AHHEQQQQQQANSQHHHHHH 21
AH + + +HHHHHH
Sbjct: 435 AHETTDKLEDDVFEHHHHHH 454
>pdb|1E5K|A Chain A, Crystal Structure Of The Molybdenum Cofactor Biosynthesis
Protein Moba (Protein Fa) From Escherichia Coli At Near
Atomic Resolution
Length = 201
Score = 25.4 bits (54), Expect = 1.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Query: 5 EQQQQQQANSQHHHHHH 21
E+ + Q HHHHHH
Sbjct: 185 EELARWQEKRSHHHHHH 201
>pdb|3GCB| Gal6 (Yeast Bleomycin Hydrolase) Mutant C73aDELTAK454
Length = 470
Score = 25.4 bits (54), Expect = 1.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 16 HHHHHHAHHHHYYGG 30
HHHHHHA + + G
Sbjct: 2 HHHHHHASENLAFQG 16
>pdb|2FCP|A Chain A, Ferric Hydroxamate Uptake Receptor (Fhua) From E.Coli
Length = 723
Score = 25.4 bits (54), Expect = 1.2
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 13 NSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQ 62
N HHHHHH + + NA+ A + +Q+Q + Q Q
Sbjct: 404 NPSHHHHHHGSVNTDF-----DFNAKDPANSGPYRILNKQKQTGVYVQDQ 448
>pdb|1LXL| Nmr Structure Of Bcl-Xl, An Inhibitor Of Programmed Cell Death,
Minimized Average Structure
pdb|1MAZ| X-Ray Structure Of Bcl-Xl, An Inhibitor Of Programmed Cell Death
Length = 221
Score = 25.4 bits (54), Expect = 1.2
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 6 QQQQQQANSQHHHHHH 21
+ ++ Q +HHHHHH
Sbjct: 206 ESRKGQERLEHHHHHH 221
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/16 (43%), Positives = 10/16 (61%)
Query: 5 EQQQQQQANSQHHHHH 20
E ++ Q+ HHHHH
Sbjct: 206 ESRKGQERLEHHHHHH 221
>pdb|1BXL|A Chain A, Structure Of Bcl-XlBAK PEPTIDE COMPLEX, NMR, MINIMIZED
Average Structure
Length = 181
Score = 25.4 bits (54), Expect = 1.2
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 6 QQQQQQANSQHHHHHH 21
+ ++ Q +HHHHHH
Sbjct: 166 ESRKGQERLEHHHHHH 181
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/16 (43%), Positives = 10/16 (61%)
Query: 5 EQQQQQQANSQHHHHH 20
E ++ Q+ HHHHH
Sbjct: 166 ESRKGQERLEHHHHHH 181
>pdb|1KP5|A Chain A, Cyclic Green Fluorescent Protein
pdb|1KP5|B Chain B, Cyclic Green Fluorescent Protein
Length = 246
Score = 25.4 bits (54), Expect = 1.2
Identities = 7/9 (77%), Positives = 9/9 (99%)
Query: 14 SQHHHHHHA 22
S+HHHHHH+
Sbjct: 3 SRHHHHHHS 11
>pdb|1PME| Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A
Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 25.4 bits (54), Expect = 1.2
Identities = 7/10 (70%), Positives = 9/10 (90%)
Query: 13 NSQHHHHHHA 22
+S HHHHHH+
Sbjct: 2 SSSHHHHHHS 11
>pdb|1FCP|A Chain A, Ferric Hydroxamate Uptake Receptor (Fhua) From E.Coli In
Complex With Bound Ferrichrome-Iron
Length = 705
Score = 25.4 bits (54), Expect = 1.2
Identities = 14/50 (28%), Positives = 21/50 (42%), Gaps = 5/50 (10%)
Query: 13 NSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQ 62
N HHHHHH + + NA+ A + +Q+Q + Q Q
Sbjct: 386 NPSHHHHHHGSVNTDF-----DFNAKDPANSGPYRILNKQKQTGVYVQDQ 430
>pdb|1I1C|A Chain A, Non-Fcrn Binding Fc Fragment Of Rat Igg2a
pdb|1I1C|B Chain B, Non-Fcrn Binding Fc Fragment Of Rat Igg2a
pdb|1I1A|D Chain D, Crystal Structure Of The Neonatal Fc Receptor Complexed
With A Heterodimeric Fc
Length = 239
Score = 25.4 bits (54), Expect = 1.2
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 1 MAHHEQQQQQQANSQHHHHHH 21
++H + + S HHHHHH
Sbjct: 219 LSHSPGKGIEGRGSSHHHHHH 239
>pdb|1A6R| Gal6 (Yeast Bleomycin Hydrolase) Mutant C73a
Length = 471
Score = 25.4 bits (54), Expect = 1.2
Identities = 8/15 (53%), Positives = 10/15 (66%)
Query: 16 HHHHHHAHHHHYYGG 30
HHHHHHA + + G
Sbjct: 2 HHHHHHASENLAFQG 16
>pdb|1EGU|A Chain A, Crystal Structure Of Streptococcus Pneumoniae Hyaluronate
Lyase At 1.56 A Resolution
pdb|1F9G|A Chain A, Crystal Structure Of Streptococcus Pneumoniae Hyaluronate
Lyase Cocrystallized With Ascorbic Acid
pdb|1C82|A Chain A, Mechanism Of Hyaluronan Binding And Degradation: Structure
Of Streptococcus Pneumoniae Hyaluronate Lyase In Complex
With Hyaluronic Acid Disaccharide At 1.7 A Resolution
Length = 731
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 15 QHHHHHH 21
QHHHHHH
Sbjct: 725 QHHHHHH 731
>pdb|1JDQ|A Chain A, Solution Structure Of Tm006 Protein From Thermotoga
Maritima
Length = 98
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 2 SSHHHHHHS 10
>pdb|1EHW|A Chain A, Human Nucleoside Diphosphate Kinase 4
pdb|1EHW|B Chain B, Human Nucleoside Diphosphate Kinase 4
Length = 162
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1GWN|C Chain C, The Crystal Structure Of The Core Domain Of RhoeRND3 - A
Constitutively Activated Small G Protein
pdb|1GWN|A Chain A, The Crystal Structure Of The Core Domain Of RhoeRND3 - A
Constitutively Activated Small G Protein
Length = 205
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1KR4|A Chain A, Structure Genomics, Protein Tm1056, Cuta
Length = 125
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
Score = 23.5 bits (49), Expect = 4.6
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 13 NSQHHHHHHAHHHHYYGGEH 32
+S HHHHH + Y H
Sbjct: 3 SSHHHHHHSSGREALYFXGH 22
>pdb|1FG5|N Chain N, Crystal Structure Of Bovine
Alpha-1,3-Galactosyltransferase Catalytic Domain
Length = 310
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1E42|B Chain B, Beta2-Adaptin Appendage Domain, From Clathrin Adaptor
Ap2
pdb|1E42|A Chain A, Beta2-Adaptin Appendage Domain, From Clathrin Adaptor
Ap2
Length = 258
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1DNY|A Chain A, Solution Structure Of Pcp, A Prototype For The Peptidyl
Carrier Domains Of Modular Peptide Synthetases
Length = 91
Score = 25.0 bits (53), Expect = 1.6
Identities = 8/13 (61%), Positives = 8/13 (61%)
Query: 9 QQQANSQHHHHHH 21
Q A HHHHHH
Sbjct: 79 QYVATRSHHHHHH 91
>pdb|1FI4|A Chain A, The X-Ray Crystal Structure Of Mevalonate 5-Diphosphate
Decarboxylase At 2.3 Angstrom Resolution
Length = 416
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1IG3|A Chain A, Mouse Thiamin Pyrophosphokinase Complexed With Thiamin
pdb|1IG3|B Chain B, Mouse Thiamin Pyrophosphokinase Complexed With Thiamin
Length = 263
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1JT0|A Chain A, Crystal Structure Of A Cooperative Qacr-Dna Complex
pdb|1JT0|B Chain B, Crystal Structure Of A Cooperative Qacr-Dna Complex
pdb|1JT0|C Chain C, Crystal Structure Of A Cooperative Qacr-Dna Complex
pdb|1JTX|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Crystal Violet
pdb|1JTX|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Crystal Violet
pdb|1JTX|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Crystal Violet
pdb|1JTX|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Crystal Violet
pdb|1JUP|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Malachite Green
pdb|1JUP|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Malachite Green
pdb|1JUP|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Malachite Green
pdb|1JUP|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Malachite Green
pdb|1JTY|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Ethidium
pdb|1JTY|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Ethidium
pdb|1JTY|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Ethidium
pdb|1JTY|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Regulator Qacr Bound To Ethidium
pdb|1JUM|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To The Natural Drug Berberine
pdb|1JUM|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To The Natural Drug Berberine
pdb|1JUM|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To The Natural Drug Berberine
pdb|1JUM|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To The Natural Drug Berberine
pdb|1JT0|D Chain D, Crystal Structure Of A Cooperative Qacr-Dna Complex
Length = 194
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/8 (87%), Positives = 8/8 (99%)
Query: 14 SQHHHHHH 21
S+HHHHHH
Sbjct: 187 SKHHHHHH 194
>pdb|1IW5|A Chain A, Solution Structure Of The Bola-Like Protein From Mus
Musculus
Length = 113
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 4 SSHHHHHHS 12
>pdb|1KNA|A Chain A, Chromo Domain Of Hp1 Complexed With Histone H3 Tail
Containing Dimethyllysine 9.
pdb|1KNE|A Chain A, Chomo Domain Of Hp1 Complexed With Histone H3 Tail
Containing Trimethyllysine 9
Length = 69
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/8 (87%), Positives = 8/8 (99%)
Query: 15 QHHHHHHA 22
+HHHHHHA
Sbjct: 3 KHHHHHHA 10
Score = 24.3 bits (51), Expect = 2.7
Identities = 7/17 (41%), Positives = 13/17 (76%)
Query: 32 HHHHNAQQHAEQQAEQQ 48
HHHH+A++ E+ A ++
Sbjct: 5 HHHHHAEEEEEEYAVEK 21
>pdb|1K7K|A Chain A, Putative Ribosomal Protein
Length = 221
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
Score = 24.3 bits (51), Expect = 2.7
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 13 NSQHHHHHHAHHHHYYGGEH 32
+S HHHHH + + Y H
Sbjct: 3 SSHHHHHHSSGRENLYFQGH 22
>pdb|1BB9| Crystal Structure Of The Sh3 Domain From Rat Amphiphysin 2
Length = 115
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1CBF| The X-Ray Structure Of A Cobalamin Biosynthetic Enzyme, Cobalt
Precorrin-4 Methyltransferase, Cbif
Length = 285
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1DTO|A Chain A, Crystal Structure Of The Complete Transactivation Domain
Of E2 Protein From The Human Papillomavirus Type 16
Length = 221
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|4HB1| A Designed Four Helix Bundle Protein
Length = 108
Score = 25.0 bits (53), Expect = 1.6
Identities = 17/46 (36%), Positives = 26/46 (55%), Gaps = 3/46 (6%)
Query: 29 GGEHHHHNAQQHAEQ---QAEQQAQQQQQQQAHQQQQQKAQQQNQQ 71
GGE A Q A+Q QA++ A++ ++ +Q Q+AQQ QQ
Sbjct: 56 GGEELLKQALQQAQQLLQQAQELAKKGGGEELLKQALQQAQQLLQQ 101
Score = 23.1 bits (48), Expect = 6.1
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 8/50 (16%)
Query: 29 GGEHHHHNAQQHAE---QQAEQQAQ-----QQQQQQAHQQQQQKAQQQNQ 70
GGE A Q A+ QQA++ A+ ++ +QA QQ QQ QQ +
Sbjct: 28 GGEELLKQALQQAQQLLQQAQELAKKGGGGEELLKQALQQAQQLLQQAQE 77
>pdb|1GYU|A Chain A, Gamma-Adaptin Appendage Domain From Clathrin Adaptor Ap1
Length = 140
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1L9X|B Chain B, Structure Of Gamma-Glutamyl Hydrolase
pdb|1L9X|D Chain D, Structure Of Gamma-Glutamyl Hydrolase
pdb|1L9X|A Chain A, Structure Of Gamma-Glutamyl Hydrolase
pdb|1L9X|C Chain C, Structure Of Gamma-Glutamyl Hydrolase
Length = 315
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|2LBD| Ligand-Binding Domain Of The Human Retinoic Acid Receptor Gamma
Bound To All-Trans Retinoic Acid
pdb|3LBD| Ligand-Binding Domain Of The Human Retinoic Acid Receptor Gamma
Bound To 9-Cis Retinoic Acid
pdb|4LBD| Ligand-Binding Domain Of The Human Retinoic Acid Receptor Gamma
Bound To The Synthetic Agonist Bms961
Length = 267
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1JYL|A Chain A, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae
(Licc)
pdb|1JYL|B Chain B, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae
(Licc)
pdb|1JYL|C Chain C, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae
(Licc)
pdb|1JYL|D Chain D, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae
(Licc)
Length = 254
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1JK0|A Chain A, Ribonucleotide Reductase Y2y4 Heterodimer
Length = 419
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1FV3|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With An
Analogue Of Its Ganglioside Receptor Gt1b
pdb|1FV3|B Chain B, The Hc Fragment Of Tetanus Toxin Complexed With An
Analogue Of Its Ganglioside Receptor Gt1b
pdb|1FV2|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With An
Analogue Of Its Ganglioside Receptor Gt1b
Length = 472
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1L2J|A Chain A, Human Estrogen Receptor Beta Ligand-Binding Domain In
Complex With (R,R)-5,11-Cis-Diethyl-5,6,11,12-
Tetrahydrochrysene-2,8-Diol
pdb|1L2J|B Chain B, Human Estrogen Receptor Beta Ligand-Binding Domain In
Complex With (R,R)-5,11-Cis-Diethyl-5,6,11,12-
Tetrahydrochrysene-2,8-Diol
Length = 271
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1G8O|A Chain A, Crystallographic Structure Of The Native Bovine
Alpha-1,3- Galactosyltransferase Catalytic Domain
pdb|1G93|A Chain A, Crystal Structure Of The Bovine Catalytic Domain Of
Alpha-1, 3-Galactosyltransferase In The Presence Of
Udp-Galactose
Length = 310
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1KZF|A Chain A, Crystal Structure Of The Acyl-Homoserine Lactone
Synthase, Esai
pdb|1K4J|A Chain A, Crystal Structure Of The Acyl-Homoserinelactone Synthase
Esai Complexed With Rhenate
Length = 230
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1K0R|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Nusa
pdb|1K0R|B Chain B, Crystal Structure Of Mycobacterium Tuberculosis Nusa
Length = 366
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1JMA|B Chain B, Crystal Structure Of The Herpes Simplex Virus Glycoprotein
D Bound To The Cellular Receptor HveaHVEM
Length = 167
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 13 NSQHHHHHH 21
+S HHHHHH
Sbjct: 159 SSSHHHHHH 167
>pdb|1KU1|A Chain A, Crystal Structure Of The Sec7 Domain Of Yeast Gea2
pdb|1KU1|B Chain B, Crystal Structure Of The Sec7 Domain Of Yeast Gea2
Length = 230
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1A9U| The Complex Structure Of The Map Kinase P38SB203580
pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
Length = 379
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 2 SSHHHHHHS 10
>pdb|1JJR|A Chain A, The Three-Dimensional Structure Of The C-Terminal Dna
Binding Domain Of Human Ku70
Length = 151
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1JYK|A Chain A, Catalytic Mechanism Of Ctp:phosphocholine
Cytidylytransferase From Streptococcus Pneumoniae
(Licc)
Length = 254
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1J6Y|A Chain A, Solution Structure Of Pin1at From Arabidopsis Thaliana
Length = 139
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
Score = 23.5 bits (49), Expect = 4.6
Identities = 8/30 (26%), Positives = 13/30 (42%)
Query: 29 GGEHHHHNAQQHAEQQAEQQAQQQQQQQAH 58
G HHHH+ + A + Q + +H
Sbjct: 2 GSSHHHHHHSSGLVPRGSHMASRDQVKASH 31
>pdb|1JUS|A Chain A, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Rhodamine 6g
pdb|1JUS|B Chain B, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Rhodamine 6g
pdb|1JUS|D Chain D, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Rhodamine 6g
pdb|1JUS|E Chain E, Crystal Structure Of The Multidrug Binding Transcriptional
Repressor Qacr Bound To Rhodamine 6g
Length = 194
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/8 (87%), Positives = 8/8 (99%)
Query: 14 SQHHHHHH 21
S+HHHHHH
Sbjct: 187 SKHHHHHH 194
>pdb|1A02|N Chain N, Structure Of The Dna Binding Domains Of Nfat, Fos And
Jun Bound To Dna
Length = 301
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 16 HHHHHHAHHH 25
HHHHHH H
Sbjct: 5 HHHHHHTDPH 14
Score = 23.9 bits (50), Expect = 3.6
Identities = 7/13 (53%), Positives = 8/13 (60%)
Query: 29 GGEHHHHNAQQHA 41
G HHHH+ HA
Sbjct: 3 GSHHHHHHTDPHA 15
>pdb|1M1M|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii
(Mtfabh)
pdb|1M1M|B Chain B, X-Ray Crystal Structure Of Mycobacterium Tuberculosis
Beta- Ketoacyl-Acyl Carrier Protein Synthase Iii
(Mtfabh)
Length = 355
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1E17|A Chain A, Solution Structure Of The Dna Binding Domain Of The
Human Forkhead Transcription Factor Afx (Foxo4)
Length = 150
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 2 SSHHHHHHS 10
>pdb|1K99|A Chain A, Solution Structure Of The First Hmg Box In Human
Upstream Binding Factor
Length = 99
Score = 25.0 bits (53), Expect = 1.6
Identities = 8/18 (44%), Positives = 9/18 (49%)
Query: 4 HEQQQQQQANSQHHHHHH 21
H Q +HHHHHH
Sbjct: 82 HPDLIQNAKKLEHHHHHH 99
>pdb|1UXD| Fructose Repressor Dna-Binding Domain, Nmr, 34 Structures
pdb|1UXC| Fructose Repressor Dna-Binding Domain, Nmr, Minimized Structure
Length = 65
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 15 QHHHHHH 21
QHHHHHH
Sbjct: 59 QHHHHHH 65
>pdb|2HFH| The Nmr Structures Of A Winged Helix Protein: Genesis, 20
Structures
Length = 109
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 15 QHHHHHH 21
QHHHHHH
Sbjct: 103 QHHHHHH 109
>pdb|1P38| The Structure Of The Map Kinase P38 At 2.1 Angstoms Resolution
pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
Length = 379
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 2 SSHHHHHHS 10
>pdb|1JE3|A Chain A, Solution Structure Of Ec005 From Escherichia Coli
Length = 97
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1I39|A Chain A, Rnase Hii From Archaeoglobus Fulgidus
pdb|1I3A|A Chain A, Rnase Hii From Archaeoglobus Fulgidus With Cobalt
Hexammine Chloride
Length = 225
Score = 25.0 bits (53), Expect = 1.6
Identities = 7/9 (77%), Positives = 8/9 (88%)
Query: 14 SQHHHHHHA 22
S HHHHHH+
Sbjct: 3 SSHHHHHHS 11
>pdb|1AZS|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
Length = 220
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 16 HHHHHHA 22
HHHHHHA
Sbjct: 2 HHHHHHA 8
>pdb|1K51|A Chain A, A G55a Mutation Induces 3d Domain Swapping In The B1
Domain Of Protein L From Peptostreptococcus Magnus
Length = 72
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 16 HHHHHHA 22
HHHHHHA
Sbjct: 2 HHHHHHA 8
>pdb|1MGP|A Chain A, Hypothetical Protein Tm841 From Thermotoga Maritima
Reveals Fatty Acid Binding Function
Length = 313
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
S HHHHHH
Sbjct: 3 SSHHHHHH 10
>pdb|1HZT|A Chain A, Crystal Structure Of Metal-Free Isopentenyl
Diphosphate:dimethylallyl Diphosphate Isomerase
Length = 190
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 11 QANSQHHHHHH 21
Q +HHHHHH
Sbjct: 180 QLKLEHHHHHH 190
>pdb|1HX3|B Chain B, Crystal Structure Of E.Coli Isopentenyl
Diphosphate:dimethylallyl Diphosphate Isomerase
pdb|1HX3|A Chain A, Crystal Structure Of E.Coli Isopentenyl
Diphosphate:dimethylallyl Diphosphate Isomerase
Length = 190
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 11 QANSQHHHHHH 21
Q +HHHHHH
Sbjct: 180 QLKLEHHHHHH 190
>pdb|1QFG|A Chain A, E. Coli Ferric Hydroxamate Receptor (Fhua)
pdb|1QJQ|A Chain A, Ferric Hydroxamate Receptor From Escherichia Coli (Fhua)
pdb|1QKC|A Chain A, Escherichia Coli Ferric Hydroxamate Uptake Receptor (Fhua)
In Complex Delta Two-Albomycin
Length = 725
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
S HHHHHH
Sbjct: 406 SSHHHHHH 413
Score = 23.1 bits (48), Expect = 6.1
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Query: 13 NSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQ 62
N HHH HHH NA+ A + +Q+Q + Q Q
Sbjct: 404 NPSSHHH---HHHGSSVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQ 450
>pdb|1AZT|B Chain B, Gs-Alpha Complexed With Gtp-Gamma-S
pdb|1AZS|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase
pdb|1AZT|A Chain A, Gs-Alpha Complexed With Gtp-Gamma-S
Length = 388
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/16 (43%), Positives = 9/16 (55%)
Query: 21 HAHHHHYYGGEHHHHN 36
H + GG HHHH+
Sbjct: 373 HLRQYELLGGHHHHHH 388
Score = 23.5 bits (49), Expect = 4.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 8 QQQQANSQHHHHHH 21
+Q + HHHHHH
Sbjct: 375 RQYELLGGHHHHHH 388
>pdb|1K53|A Chain A, Monomeric Protein L B1 Domain With A G15a Mutation
pdb|1K53|B Chain B, Monomeric Protein L B1 Domain With A G15a Mutation
Length = 72
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 16 HHHHHHA 22
HHHHHHA
Sbjct: 2 HHHHHHA 8
>pdb|1FI1|A Chain A, Fhua In Complex With Lipopolysaccharide And Rifamycin
Cgp4832
Length = 707
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
S HHHHHH
Sbjct: 388 SSHHHHHH 395
Score = 23.1 bits (48), Expect = 6.1
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Query: 13 NSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQ 62
N HHH HHH NA+ A + +Q+Q + Q Q
Sbjct: 386 NPSSHHH---HHHGSSVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQ 432
>pdb|1CJU|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp And Mg
pdb|1CJT|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mn, And Mg
pdb|1CJK|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With Adenosine
5'-(Alpha Thio)- Triphosphate (Rp), Mg, And Mn
pdb|1CJV|C Chain C, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
Beta-L-2',3'-Dideoxyatp, Mg, And Zn
Length = 402
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/16 (43%), Positives = 9/16 (55%)
Query: 21 HAHHHHYYGGEHHHHN 36
H + GG HHHH+
Sbjct: 387 HLRQYELLGGHHHHHH 402
Score = 23.5 bits (49), Expect = 4.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 8 QQQQANSQHHHHHH 21
+Q + HHHHHH
Sbjct: 389 RQYELLGGHHHHHH 402
>pdb|1MB1| Mbp1 From Saccharomyces Cerevisiae
Length = 130
Score = 24.6 bits (52), Expect = 2.1
Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 5/20 (25%)
Query: 15 QHHHHHHAHHHHYYGGEHHH 34
+HHH HHH HHH
Sbjct: 116 KHHHASKVDHHH-----HHH 130
Score = 23.9 bits (50), Expect = 3.6
Identities = 7/13 (53%), Positives = 9/13 (68%)
Query: 24 HHHYYGGEHHHHN 36
HHH +HHHH+
Sbjct: 117 HHHASKVDHHHHH 129
Score = 22.7 bits (47), Expect = 7.9
Identities = 7/14 (50%), Positives = 8/14 (57%)
Query: 23 HHHHYYGGEHHHHN 36
HHH HHHH+
Sbjct: 117 HHHASKVDHHHHHH 130
>pdb|1K52|B Chain B, Monomeric Protein L B1 Domain With A K54g Mutation
pdb|1K52|A Chain A, Monomeric Protein L B1 Domain With A K54g Mutation
Length = 72
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 16 HHHHHHA 22
HHHHHHA
Sbjct: 2 HHHHHHA 8
>pdb|1GV4|A Chain A, Murine Apoptosis-Inducing Factor (Aif)
pdb|1GV4|B Chain B, Murine Apoptosis-Inducing Factor (Aif)
Length = 528
Score = 24.6 bits (52), Expect = 2.1
Identities = 11/29 (37%), Positives = 13/29 (43%)
Query: 16 HHHHHHAHHHHYYGGEHHHHNAQQHAEQQ 44
HHHHHH+ GG A E+Q
Sbjct: 2 HHHHHHSSGLVPRGGSGMKETAAAKFERQ 30
>pdb|1F2V|A Chain A, Crystal Structure Analysis Of Precorrin-8x Methylmutase
Of Aerobic Vitamin B12 Synthesis
pdb|1I1H|A Chain A, Crystal Structure Analysis Of Precorrin-8x Methylmutase
Complex With Hydrogenobyrinic Acid
Length = 219
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/15 (46%), Positives = 9/15 (59%)
Query: 16 HHHHHHAHHHHYYGG 30
HHHHHH + + G
Sbjct: 5 HHHHHHPEYDYIRDG 19
>pdb|1QFF|A Chain A, E. Coli Ferric Hydroxamate Uptake Receptor (Fhua) In
Complex With Bound Ferrichrome-Iron
Length = 725
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
S HHHHHH
Sbjct: 406 SSHHHHHH 413
Score = 23.1 bits (48), Expect = 6.1
Identities = 14/50 (28%), Positives = 19/50 (38%), Gaps = 3/50 (6%)
Query: 13 NSQHHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQ 62
N HHH HHH NA+ A + +Q+Q + Q Q
Sbjct: 404 NPSSHHH---HHHGSSVNTDFDFNAKDPANSGPYRILNKQKQTGVYVQDQ 450
>pdb|1CS4|A Chain A, Complex Of Gs-Alpha With The Catalytic Domains Of
Mammalian Adenylyl Cyclase: Complex With
2'-Deoxy-Adenosine 3'- Monophosphate, Pyrophosphate And
Mg
Length = 225
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 16 HHHHHHA 22
HHHHHHA
Sbjct: 2 HHHHHHA 8
>pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With
Mg-Adp
Length = 367
Score = 24.6 bits (52), Expect = 2.1
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 2 AHHEQQQQQQANSQHHHHHH 21
A +Q + + HHHHHH
Sbjct: 348 ADRAKQIRNTVSVNHHHHHH 367
>pdb|1DF9|A Chain A, Dengue Virus Ns3-Protease Complexed With Mung-Bean
Bowman- Birk Inhibitor
pdb|1DF9|B Chain B, Dengue Virus Ns3-Protease Complexed With Mung-Bean
Bowman- Birk Inhibitor
Length = 191
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 16 HHHHHHA 22
HHHHHHA
Sbjct: 1 HHHHHHA 7
>pdb|1HZ5|B Chain B, Crystal Structures Of The B1 Domain Of Protein L From
Peptostreptococcus Magnus, With A Tyrosine To
Tryptophan Substitution
pdb|1HZ5|A Chain A, Crystal Structures Of The B1 Domain Of Protein L From
Peptostreptococcus Magnus, With A Tyrosine To
Tryptophan Substitution
pdb|1HZ6|A Chain A, Crystal Structures Of The B1 Domain Of Protein L From
Peptostreptococcus Magnus With A Tyrosine To Tryptophan
Substitution
pdb|1HZ6|B Chain B, Crystal Structures Of The B1 Domain Of Protein L From
Peptostreptococcus Magnus With A Tyrosine To Tryptophan
Substitution
pdb|1HZ6|C Chain C, Crystal Structures Of The B1 Domain Of Protein L From
Peptostreptococcus Magnus With A Tyrosine To Tryptophan
Substitution
Length = 72
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 16 HHHHHHA 22
HHHHHHA
Sbjct: 2 HHHHHHA 8
>pdb|1MHX|A Chain A, Crystal Structures Of The Redesigned Protein G Variant
Nug1
Length = 65
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 16 HHHHHHA 22
HHHHHHA
Sbjct: 2 HHHHHHA 8
>pdb|1C2P|B Chain B, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
pdb|1C2P|A Chain A, Hepatitis C Virus Ns5b Rna-Dependent Rna Polymerase
Length = 576
Score = 24.6 bits (52), Expect = 2.1
Identities = 6/10 (60%), Positives = 9/10 (90%)
Query: 14 SQHHHHHHAH 23
+ HHHHHH++
Sbjct: 1 ASHHHHHHSY 10
>pdb|1J6U|A Chain A, Crystal Structure Of Udp-N-Acetylmuramate--Alanine
Ligase (Tm0231) From Thermotoga Maritima At 2.3 A
Resolution
Length = 469
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/10 (70%), Positives = 7/10 (70%)
Query: 16 HHHHHHAHHH 25
HHHHHH H
Sbjct: 7 HHHHHHXKIH 16
Score = 23.5 bits (49), Expect = 4.6
Identities = 7/13 (53%), Positives = 8/13 (60%)
Query: 17 HHHHHAHHHHYYG 29
HHHHH H+ G
Sbjct: 7 HHHHHHXKIHFVG 19
Score = 22.7 bits (47), Expect = 7.9
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 16 HHHHHHAHHHHYYGG 30
HHHHH H GG
Sbjct: 8 HHHHHXKIHFVGIGG 22
>pdb|1K92|A Chain A, Crystal Structure Of Uncomplexed E. Coli Argininosuccinate
Synthetase
pdb|1KP3|A Chain A, Crystal Structure Of E. Coli Argininosuccinate Synthetase
In Complex With Atp And Citrulline
pdb|1K97|A Chain A, Crystal Structure Of E. Coli Argininosuccinate Synthetase
In Complex With Aspartate And Citrulline
pdb|1KP2|A Chain A, Crystal Structure Of E. Coli Argininosuccinate Synthetase
In Complex With Atp
Length = 455
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/17 (41%), Positives = 11/17 (64%)
Query: 5 EQQQQQQANSQHHHHHH 21
E + + + +HHHHHH
Sbjct: 439 ENLENKGQSVEHHHHHH 455
>pdb|1MI0|A Chain A, Crystal Structure Of The Redesigned Protein G Variant
Nug2
pdb|1MI0|B Chain B, Crystal Structure Of The Redesigned Protein G Variant
Nug2
Length = 65
Score = 24.6 bits (52), Expect = 2.1
Identities = 7/7 (100%), Positives = 7/7 (100%)
Query: 16 HHHHHHA 22
HHHHHHA
Sbjct: 2 HHHHHHA 8
>pdb|1F2X|L Chain L, Structure Of The Single-Domain Camelid Antibody Cab-Ca05
pdb|1F2X|K Chain K, Structure Of The Single-Domain Camelid Antibody Cab-Ca05
Length = 135
Score = 24.3 bits (51), Expect = 2.7
Identities = 9/22 (40%), Positives = 12/22 (53%), Gaps = 3/22 (13%)
Query: 3 HHEQQQQQ---QANSQHHHHHH 21
H+ Q Q + +HHHHHH
Sbjct: 114 HYRGQGTQVTVSSRGRHHHHHH 135
Score = 22.7 bits (47), Expect = 7.9
Identities = 8/23 (34%), Positives = 10/23 (42%)
Query: 3 HHEQQQQQQANSQHHHHHHAHHH 25
+H + Q Q HH HHH
Sbjct: 113 YHYRGQGTQVTVSSRGRHHHHHH 135
>pdb|1QUV|A Chain A, Crystal Structure Of The Rna Directed Rna Polymerase Of
Hepatitis C Virus
Length = 578
Score = 24.3 bits (51), Expect = 2.7
Identities = 7/18 (38%), Positives = 10/18 (54%)
Query: 3 HHEQQQQQQANSQHHHHH 20
+H + + S HHHHH
Sbjct: 561 YHSLSRARPRGSHHHHHH 578
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 573 HHHHHH 578
>pdb|1JS1|X Chain X, Crystal Structure Of A New Transcarbamylase From The
Anaerobic Bacterium Bacteroides Fragilis At 2.0 A
Resolution
pdb|1JS1|Y Chain Y, Crystal Structure Of A New Transcarbamylase From The
Anaerobic Bacterium Bacteroides Fragilis At 2.0 A
Resolution
pdb|1JS1|Z Chain Z, Crystal Structure Of A New Transcarbamylase From The
Anaerobic Bacterium Bacteroides Fragilis At 2.0 A
Resolution
Length = 324
Score = 24.3 bits (51), Expect = 2.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 13 NSQHHHHHH 21
N HHHHHH
Sbjct: 316 NLPHHHHHH 324
>pdb|1KIC|A Chain A, Inosine-Adenosine-Guanosine Preferring Nucleoside
Hydrolase From Trypanosoma Vivax: Asp10ala Mutant In
Complex With Inosine
pdb|1KIC|B Chain B, Inosine-Adenosine-Guanosine Preferring Nucleoside
Hydrolase From Trypanosoma Vivax: Asp10ala Mutant In
Complex With Inosine
pdb|1KIE|A Chain A, Inosine-Adenosine-Guanosine Preferring Nucleoside
Hydrolase From Trypanosoma Vivax: Asp10ala Mutant In
Complex With 3- Deaza-Adenosine
pdb|1KIE|B Chain B, Inosine-Adenosine-Guanosine Preferring Nucleoside
Hydrolase From Trypanosoma Vivax: Asp10ala Mutant In
Complex With 3- Deaza-Adenosine
Length = 339
Score = 24.3 bits (51), Expect = 2.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
S HHHHHH
Sbjct: 4 SPHHHHHH 11
>pdb|1MHC|A Chain A, Model Of Mhc Class I H2-M3 With Nonapeptide From Rat Nd1
Refined At 2.3 Angstroms Resolution
pdb|1MHC|D Chain D, Model Of Mhc Class I H2-M3 With Nonapeptide From Rat Nd1
Refined At 2.3 Angstroms Resolution
Length = 282
Score = 24.3 bits (51), Expect = 2.7
Identities = 9/21 (42%), Positives = 10/21 (46%)
Query: 3 HHEQQQQQQANSQHHHHHHAH 23
HHE + A HHHH H
Sbjct: 262 HHEGLTEPLALKWRSHHHHHH 282
>pdb|1H65|A Chain A, Crystal Structure Of Pea Toc34 - A Novel Gtpase Of The
Chloroplast Protein Translocon
pdb|1H65|B Chain B, Crystal Structure Of Pea Toc34 - A Novel Gtpase Of The
Chloroplast Protein Translocon
pdb|1H65|C Chain C, Crystal Structure Of Pea Toc34 - A Novel Gtpase Of The
Chloroplast Protein Translocon
Length = 270
Score = 24.3 bits (51), Expect = 2.7
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 12 ANSQHHHHHH 21
A + HHHHHH
Sbjct: 261 AAADHHHHHH 270
>pdb|1IBX|A Chain A, Nmr Structure Of Dff40 And Dff45 N-Terminal Domain
Complex
Length = 86
Score = 24.3 bits (51), Expect = 2.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Query: 11 QANSQHHHHHH 21
QA HHHHHH
Sbjct: 76 QAWQGHHHHHH 86
>pdb|1K6L|M Chain M, Photosynethetic Reaction Center From Rhodobacter
Sphaeroides
pdb|1K6N|M Chain M, E(L212)a,D(L213)a Double Mutant Structure Of
Photosynthetic Reaction Center From Rhodobacter
Sphaeroides
Length = 314
Score = 24.3 bits (51), Expect = 2.7
Identities = 8/15 (53%), Positives = 8/15 (53%)
Query: 7 QQQQQANSQHHHHHH 21
Q A HHHHHH
Sbjct: 299 QNHGMAPLNHHHHHH 313
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
+ HHHHHH
Sbjct: 307 NHHHHHHH 314
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 16 HHHHHHAH 23
+HHHHH H
Sbjct: 307 NHHHHHHH 314
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 19 HHHAHHHH 26
+HH HHHH
Sbjct: 307 NHHHHHHH 314
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 18 HHHHAHHH 25
+HHH HHH
Sbjct: 307 NHHHHHHH 314
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 17 HHHHHAHH 24
+HHHH HH
Sbjct: 307 NHHHHHHH 314
>pdb|1HUF|A Chain A, Crystal Structure Of The N-Terminal Domain Of The Tyrosine
Phosphatase Yoph From Yersinia Pestis
Length = 140
Score = 24.3 bits (51), Expect = 2.7
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 8 QQQQANSQHHHHHH 21
+Q+ HHHHHH
Sbjct: 127 RQESGARGHHHHHH 140
Score = 23.9 bits (50), Expect = 3.6
Identities = 7/14 (50%), Positives = 9/14 (64%)
Query: 7 QQQQQANSQHHHHH 20
+Q+ A HHHHH
Sbjct: 127 RQESGARGHHHHHH 140
Score = 23.9 bits (50), Expect = 3.6
Identities = 7/17 (41%), Positives = 12/17 (70%)
Query: 5 EQQQQQQANSQHHHHHH 21
E +Q++ ++ HHHHH
Sbjct: 123 EAALRQESGARGHHHHH 139
>pdb|1HP0|A Chain A, Crystal Structure Of An Inosine-Adenosine-Guanosine-
Preferring Nucleoside Hydrolase From Trypanosoma Vivax
In Complex With The Substrate Analogue
3-Deaza-Adenosine
pdb|1HP0|B Chain B, Crystal Structure Of An Inosine-Adenosine-Guanosine-
Preferring Nucleoside Hydrolase From Trypanosoma Vivax
In Complex With The Substrate Analogue
3-Deaza-Adenosine
pdb|1HOZ|A Chain A, Crystal Structure Of An Inosine-Adenosine-Guanosine-
Preferring Nucleoside Hydrolase From Trypanosoma Vivax
pdb|1HOZ|B Chain B, Crystal Structure Of An Inosine-Adenosine-Guanosine-
Preferring Nucleoside Hydrolase From Trypanosoma Vivax
Length = 339
Score = 24.3 bits (51), Expect = 2.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
S HHHHHH
Sbjct: 4 SPHHHHHH 11
>pdb|1QOM|A Chain A, Murine Inducible Nitric Oxide Synthase Oxygenase Dimer
(Delta 65) With Swapped N-Terminal Hook
pdb|1QOM|B Chain B, Murine Inducible Nitric Oxide Synthase Oxygenase Dimer
(Delta 65) With Swapped N-Terminal Hook
Length = 440
Score = 24.3 bits (51), Expect = 2.7
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 14 SQHHHHHH 21
++HHHHHH
Sbjct: 433 NEHHHHHH 440
>pdb|1DD9|A Chain A, Structure Of The Dnag Catalytic Core
pdb|1DDE|A Chain A, Structure Of The Dnag Catalytic Core
Length = 338
Score = 24.3 bits (51), Expect = 2.7
Identities = 13/42 (30%), Positives = 15/42 (34%)
Query: 21 HAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQ 62
H HHHH G H Q + Q QQ A +Q
Sbjct: 5 HHHHHHGSGSMHQRQTLYQLMDGLNTFYQQSLQQPVATSARQ 46
Score = 24.3 bits (51), Expect = 2.7
Identities = 10/35 (28%), Positives = 14/35 (39%)
Query: 22 AHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQ 56
+HHHH++G H + QQ QQ
Sbjct: 4 SHHHHHHGSGSMHQRQTLYQLMDGLNTFYQQSLQQ 38
Score = 23.1 bits (48), Expect = 6.1
Identities = 11/46 (23%), Positives = 16/46 (33%)
Query: 23 HHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQQ 68
HHHH+ G H QQ QQ +Q +++
Sbjct: 6 HHHHHGSGSMHQRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKR 51
>pdb|1BC9| Cytohesin-1B2-1 Sec7 Domain, Nmr, Minimized Average Structure
Length = 200
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 194 EHHHHHH 200
>pdb|1LR0|A Chain A, Pseudomonas Aeruginosa Tola Domain Iii, Seleno-Methionine
Derivative
Length = 129
Score = 23.9 bits (50), Expect = 3.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
S HHHHHH
Sbjct: 122 SLHHHHHH 129
>pdb|1J8C|A Chain A, Solution Structure Of The Ubiquitin-Like Domain Of Hplic-2
Length = 125
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 119 EHHHHHH 125
>pdb|1E7Z|A Chain A, Crystal Structure Of The Emap2RNA BINDING DOMAIN OF THE
P43 Protein From Human Aminoacyl-Trna Synthetase Complex
Length = 174
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 168 EHHHHHH 174
>pdb|1L5Y|A Chain A, Crystal Structure Of Mg2+ BEF3-Bound Receiver Domain Of
Sinorhizobium Meliloti Dctd
pdb|1L5Y|B Chain B, Crystal Structure Of Mg2+ BEF3-Bound Receiver Domain Of
Sinorhizobium Meliloti Dctd
pdb|1L5Z|A Chain A, Crystal Structure Of The E121k Substitution Of The
Receiver Domain Of Sinorhizobium Meliloti Dctd
Length = 155
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 149 EHHHHHH 155
>pdb|1I3O|B Chain B, Crystal Structure Of The Complex Of Xiap-Bir2 And Caspase
3
pdb|1I3O|D Chain D, Crystal Structure Of The Complex Of Xiap-Bir2 And Caspase
3
Length = 110
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 104 EHHHHHH 110
>pdb|1GD0|A Chain A, Human Macrophage Migration Inhibitory Factor (Mif)
pdb|1GD0|C Chain C, Human Macrophage Migration Inhibitory Factor (Mif)
pdb|1GCZ|A Chain A, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor.
pdb|1GCZ|C Chain C, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor.
pdb|1GD0|B Chain B, Human Macrophage Migration Inhibitory Factor (Mif)
pdb|1GCZ|B Chain B, Macrophage Migration Inhibitory Factor (Mif) Complexed
With Inhibitor
Length = 122
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 116 EHHHHHH 122
>pdb|1A1W| Fadd Death Effector Domain, F25y Mutant, Nmr Minimized Average
Structure
Length = 91
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 85 EHHHHHH 91
>pdb|1D1R|A Chain A, Nmr Solution Structure Of The Product Of The E. Coli Ycih
Gene
Length = 116
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 110 EHHHHHH 116
>pdb|1PLS| Pleckstrin (N-Terminal Pleckstrin Homology Domain) Mutant With Leu
Glu (His)6 Added To The C Terminus (Ins(G105-Lehhhhhh))
(Nmr, 25 Structures)
Length = 113
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 107 EHHHHHH 113
>pdb|1FXX|A Chain A, The Structure Of Exonuclease I Suggests How Processivity
Is Achieved
Length = 482
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 476 EHHHHHH 482
>pdb|1M9S|A Chain A, Crystal Structure Of Internalin B (Inlb), A Listeria
Monocytogenes Virulence Protein Containing Sh3-Like
Domains
Length = 605
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 599 EHHHHHH 605
>pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form
Length = 394
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/12 (50%), Positives = 9/12 (75%)
Query: 10 QQANSQHHHHHH 21
++ +HHHHHH
Sbjct: 383 EEWKKKHHHHHH 394
>pdb|1JU3|A Chain A, Bacterial Cocaine Esterase Complex With Transition State
Analog
pdb|1JU4|A Chain A, Bacterial Cocaine Esterase Complex With Product
Length = 583
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 577 EHHHHHH 583
>pdb|1KBU|A Chain A, Cre Recombinase Bound To A Loxp Holliday Junction
pdb|1KBU|B Chain B, Cre Recombinase Bound To A Loxp Holliday Junction
Length = 349
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 16 HHHHHHAH 23
HHHHHH++
Sbjct: 2 HHHHHHSN 9
>pdb|1H6Y|A Chain A, The Role Of Conserved Amoni Acids In The Cleft Of The
C-Terminal Family 22 Carbohydrate Binding Module Of
Clostridium Thermocellum Xyn10b In Ligand Binding
pdb|1H6Y|B Chain B, The Role Of Conserved Amoni Acids In The Cleft Of The
C-Terminal Family 22 Carbohydrate Binding Module Of
Clostridium Thermocellum Xyn10b In Ligand Binding
Length = 170
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 164 EHHHHHH 170
>pdb|1C5K|A Chain A, The Structure Of Tolb, An Essential Component Of The Tol-
Dependent Translocation System And Its Interactions With
The Translocation Domain Of Colicin E9
Length = 439
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 433 EHHHHHH 439
>pdb|1AMU|B Chain B, Phenylalanine Activating Domain Of Gramicidin Synthetase 1
In A Complex With Amp And Phenylalanine
pdb|1AMU|A Chain A, Phenylalanine Activating Domain Of Gramicidin Synthetase 1
In A Complex With Amp And Phenylalanine
Length = 563
Score = 23.9 bits (50), Expect = 3.6
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 10 QQANSQHHHHHH 21
Q HHHHHH
Sbjct: 552 QDVLGSHHHHHH 563
>pdb|1K3K|A Chain A, Solution Structure Of A Bcl-2 Homolog From Kaposi's
Sarcoma Virus
Length = 158
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 152 EHHHHHH 158
>pdb|1F17|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With Nadh
pdb|1F12|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With 3-
Hydroxybutyryl-Coa
pdb|1F14|A Chain A, L-3-Hydroxyacyl-Coa Dehydrogenase (Apo)
pdb|1F17|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With Nadh
pdb|1F14|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase (Apo)
pdb|1F12|B Chain B, L-3-Hydroxyacyl-Coa Dehydrogenase Complexed With 3-
Hydroxybutyryl-Coa
Length = 310
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 304 EHHHHHH 310
>pdb|1IIR|A Chain A, Crystal Structure Of Udp-Glucosyltransferase Gtfb
Length = 415
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 409 EHHHHHH 415
>pdb|1RRB| The Ras-Binding Domain Of Raf-1 From Rat, Nmr, 1 Structure
Length = 107
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 101 EHHHHHH 107
>pdb|1KXR|B Chain B, Crystal Structure Of Calcium-Bound Protease Core Of
Calpain I
pdb|1KXR|A Chain A, Crystal Structure Of Calcium-Bound Protease Core Of
Calpain I
Length = 339
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 333 EHHHHHH 339
>pdb|1JID|A Chain A, Human Srp19 In Complex With Helix 6 Of Human Srp Rna
Length = 128
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 122 EHHHHHH 128
>pdb|1DDF| Fas Death Domain, Nmr, Minimized Average Structure
Length = 127
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 121 EHHHHHH 127
>pdb|1KKD|A Chain A, Solution Structure Of The Calmodulin Binding Domain
(Cambd) Of Small Conductance Ca2+-Activated Potassium
Channels (Sk2)
Length = 102
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 96 EHHHHHH 102
>pdb|1LN4|A Chain A, Crystal Structure Of E. Coli Yhby
Length = 104
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 98 EHHHHHH 104
>pdb|1HM9|A Chain A, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine-1-
Phosphate Uridyltransferase, Glmu, Bound To Acetyl
Coenzyme A And Udp-N-Acetylglucosamine
pdb|1HM9|B Chain B, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine-1-
Phosphate Uridyltransferase, Glmu, Bound To Acetyl
Coenzyme A And Udp-N-Acetylglucosamine
pdb|1HM8|A Chain A, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine-1-
Phosphate Uridyltransferase, Glmu, Bound To Acetyl
Coenzyme A
pdb|1HM8|B Chain B, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine-1-
Phosphate Uridyltransferase, Glmu, Bound To Acetyl
Coenzyme A
pdb|1HM0|A Chain A, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine 1-
Phosphate Uridyltransferase, Glmu
pdb|1HM0|B Chain B, Crystal Structure Of S.Pneumoniae N-Acetylglucosamine 1-
Phosphate Uridyltransferase, Glmu
Length = 468
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/8 (75%), Positives = 8/8 (100%)
Query: 16 HHHHHHAH 23
HHHHHH++
Sbjct: 5 HHHHHHSN 12
>pdb|1MSZ|A Chain A, Solution Structure Of The R3h Domain From Human Smubp-2
Length = 86
Score = 23.9 bits (50), Expect = 3.6
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 10 QQANSQHHHHH 20
++A S HHHHH
Sbjct: 76 KRAGSHHHHHH 86
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 81 HHHHHH 86
>pdb|1EFH|B Chain B, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
pdb|1EFH|A Chain A, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
Length = 292
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 286 EHHHHHH 292
>pdb|1F0K|A Chain A, The 1.9 Angstrom Crystal Structure Of E. Coli Murg
pdb|1F0K|B Chain B, The 1.9 Angstrom Crystal Structure Of E. Coli Murg
Length = 364
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 358 EHHHHHH 364
>pdb|1MM4|A Chain A, Solution Nmr Structure Of The Outer Membrane Enzyme Pagp
In Dpc Micelles
pdb|1MM5|A Chain A, Solution Nmr Structure Of The Outer Membrane Enzyme Pagp
In Og Micelles
Length = 170
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 164 EHHHHHH 170
>pdb|1KEZ|A Chain A, Crystal Structure Of The Macrocycle-Forming Thioesterase
Domain Of Erythromycin Polyketide Synthase (Debs Te)
pdb|1KEZ|B Chain B, Crystal Structure Of The Macrocycle-Forming Thioesterase
Domain Of Erythromycin Polyketide Synthase (Debs Te)
pdb|1KEZ|C Chain C, Crystal Structure Of The Macrocycle-Forming Thioesterase
Domain Of Erythromycin Polyketide Synthase (Debs Te)
Length = 300
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 294 EHHHHHH 300
>pdb|1GKL|A Chain A, S954a Mutant Of The Feruloyl Esterase Module From
Clostridium Thermocellum Complexed With Ferulic Acid
pdb|1GKL|B Chain B, S954a Mutant Of The Feruloyl Esterase Module From
Clostridium Thermocellum Complexed With Ferulic Acid
Length = 297
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 291 EHHHHHH 297
>pdb|1D2D|A Chain A, Hamster Eprs Second Repeated Element; Nmr, 15 Structures
pdb|1R1B|A Chain A, Eprs Second Repeated Element, Nmr, Minimized Average
Structure
Length = 59
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 53 EHHHHHH 59
>pdb|1J6O|A Chain A, Crystal Structure Of Conserved Hypothetical Protein
(Tm0667) From Thermotoga Maritima At 1.8 A Resolution
Length = 268
Score = 23.9 bits (50), Expect = 3.6
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 16 HHHHHHAHHHH 26
HHHHHH H
Sbjct: 7 HHHHHHXVDTH 17
>pdb|1GQF|A Chain A, Crystal Structure Of Human Procaspase-7
pdb|1GQF|B Chain B, Crystal Structure Of Human Procaspase-7
Length = 265
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 259 EHHHHHH 265
>pdb|1FL0|A Chain A, Crystal Structure Of The Emap2RNA-Binding Domain Of The
P43 Protein From Human Aminoacyl-Trna Synthetase Complex
Length = 171
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 165 EHHHHHH 171
>pdb|1GKK|A Chain A, Feruloyl Esterase Domain Of Xyny From Clostridium
Thermocellum
pdb|1GKK|B Chain B, Feruloyl Esterase Domain Of Xyny From Clostridium
Thermocellum
Length = 297
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 291 EHHHHHH 297
>pdb|1MC0|A Chain A, Regulatory Segment Of Mouse 3',5'-Cyclic Nucleotide
Phosphodiesterase 2a, Containing The Gaf A And Gaf B
Domains
Length = 368
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 362 EHHHHHH 368
Score = 22.7 bits (47), Expect = 7.9
Identities = 8/27 (29%), Positives = 13/27 (47%)
Query: 10 QQANSQHHHHHHAHHHHYYGGEHHHHN 36
++ N + H A+ Y HHHH+
Sbjct: 342 KKVNEAQYRSHLANEMMMYLEHHHHHH 368
>pdb|1JH3|A Chain A, Solution Structure Of Tyrosyl-Trna Synthetase C-Terminal
Domain
Length = 107
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 101 EHHHHHH 107
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/11 (54%), Positives = 9/11 (81%)
Query: 15 QHHHHHHAHHH 25
+HHHHHH ++
Sbjct: 3 KHHHHHHGKNN 13
>pdb|1JG2|A Chain A, Crystal Structure Of L-Isoaspartyl (D-Aspartyl) O-
Methyltransferase With Adenosine
pdb|1JG4|A Chain A, Crystal Structure Of L-Isoaspartyl (D-Aspartyl) O-
Methyltransferase With S-Adenosylmethionine
pdb|1JG3|A Chain A, Crystal Structure Of L-Isoaspartyl (D-Aspartyl) O-
Methyltransferase With Adenosine & Vyp(Isp)ha Substrate
pdb|1JG3|B Chain B, Crystal Structure Of L-Isoaspartyl (D-Aspartyl) O-
Methyltransferase With Adenosine & Vyp(Isp)ha Substrate
pdb|1JG1|A Chain A, Crystal Structure Of L-Isoaspartyl (D-Aspartyl) O-
Methyltransferase With S-Adenosyl-L-Homocysteine
Length = 235
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 229 EHHHHHH 235
>pdb|1FNO|A Chain A, Peptidase T (Tripeptidase)
Length = 417
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 411 EHHHHHH 417
>pdb|1QKK|A Chain A, Crystal Structure Of The Receiver Domain And Linker Region
Of Dctd From Sinorhizobium Meliloti
Length = 155
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 149 EHHHHHH 155
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain
Complexed With Gdp, Determined As Myosin Fusion
pdb|1JX2|A Chain A, Crystal Structure Of The Nucleotide-Free Dynamin A
Gtpase Domain, Determined As Myosin Fusion
Length = 776
Score = 23.9 bits (50), Expect = 3.6
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 19 HHHAHHHHYYGGEHHHHNAQQHAEQQAEQ 47
HHH HHH H + H + +Q
Sbjct: 2 HHHHHHHDGTEDPIHDRTSDYHKYLKVKQ 30
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 2 HHHHHH 7
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 3 HHHHHH 8
>pdb|1K8M|A Chain A, Solution Structure Of The Lipoic Acid-Bearing Domain Of
The E2 Component Of Human, Mitochondrial Branched-Chain
Alpha- Ketoacid Dehydrogenase
pdb|1K8O|A Chain A, Solution Structure Of The Lipoic Acid-Bearing Domain Of
The E2 Component Of Human, Mitochondrial Branched-Chain
Alpha- Ketoacid Dehydrogenase
Length = 93
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 87 EHHHHHH 93
>pdb|1H6X|A Chain A, The Role Of Conserved Amoni Acids In The Cleft Of The
C-Terminal Family 22 Carbohydrate Binding Module Of
Clostridium Thermocellum Xyn10b In Ligand Binding
Length = 170
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 164 EHHHHHH 170
>pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant
Length = 278
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 272 EHHHHHH 278
>pdb|1L8Y|A Chain A, Solution Structure Of Hmg Box 5 In Human Upstream
Binding Factor
pdb|1L8Z|A Chain A, Solution Structure Of Hmg Box 5 In Human Upstream
Binding Factor
Length = 91
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 85 EHHHHHH 91
>pdb|1A1Z| Fadd Death Effector Domain, F25g Mutant, Nmr Minimized Average
Structure
Length = 91
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 85 EHHHHHH 91
>pdb|1J5W|A Chain A, Crystal Structure Of Glycyl-Trna Synthetase Alpha Chain
(Tm0216) From Thermotoga Maritima At 1.95 A Resolution
pdb|1J5W|B Chain B, Crystal Structure Of Glycyl-Trna Synthetase Alpha Chain
(Tm0216) From Thermotoga Maritima At 1.95 A Resolution
Length = 298
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 16 HHHHHHAH 23
HHHHHH +
Sbjct: 7 HHHHHHXY 14
>pdb|1JYM|A Chain A, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
pdb|1JYM|B Chain B, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
pdb|1JYM|E Chain E, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
pdb|1JYM|D Chain D, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
pdb|1JYM|H Chain H, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
pdb|1JYM|F Chain F, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
pdb|1JYM|G Chain G, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
pdb|1JYM|I Chain I, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
pdb|1JYM|J Chain J, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
pdb|1JYM|C Chain C, Crystals Of Peptide Deformylase From Plasmodium Falciparum
With Ten Subunits Per Asymmetric Unit Reveal Critical
Characteristics Of The Active Site For Drug Design
Length = 183
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 177 EHHHHHH 183
>pdb|1MMU|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Glucose
pdb|1MMU|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Glucose
pdb|1MMX|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Fucose
pdb|1MMX|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Fucose
pdb|1MMY|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Quinovose
pdb|1MMY|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Quinovose
pdb|1MMZ|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With L-Arabinose
pdb|1MMZ|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With L-Arabinose
pdb|1MN0|A Chain A, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Xylose
pdb|1MN0|B Chain B, Crystal Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With D-Xylose
pdb|1L7K|B Chain B, X-Ray Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With Galactose
pdb|1L7K|A Chain A, X-Ray Structure Of Galactose Mutarotase From Lactococcus
Lactis Complexed With Galactose
pdb|1L7J|A Chain A, X-Ray Structure Of Galactose Mutarotase From Lactococcus
Lactis (Apo)
pdb|1L7J|B Chain B, X-Ray Structure Of Galactose Mutarotase From Lactococcus
Lactis (Apo)
Length = 347
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 341 EHHHHHH 347
>pdb|1K2E|A Chain A, Crystal Structure Of A Nudix Protein From Pyrobaculum
Aerophilum
pdb|1K2E|B Chain B, Crystal Structure Of A Nudix Protein From Pyrobaculum
Aerophilum
pdb|1K26|A Chain A, Structure Of A Nudix Protein From Pyrobaculum Aerophilum
Solved By The Single Wavelength Anomolous Scattering
Method
pdb|1JRK|D Chain D, Crystal Structure Of A Nudix Protein From Pyrobaculum
Aerophilum Reveals A Dimer With Intertwined Beta Sheets
pdb|1JRK|A Chain A, Crystal Structure Of A Nudix Protein From Pyrobaculum
Aerophilum Reveals A Dimer With Intertwined Beta Sheets
pdb|1JRK|C Chain C, Crystal Structure Of A Nudix Protein From Pyrobaculum
Aerophilum Reveals A Dimer With Intertwined Beta Sheets
pdb|1K26|B Chain B, Structure Of A Nudix Protein From Pyrobaculum Aerophilum
Solved By The Single Wavelength Anomolous Scattering
Method
pdb|1JRK|B Chain B, Crystal Structure Of A Nudix Protein From Pyrobaculum
Aerophilum Reveals A Dimer With Intertwined Beta Sheets
Length = 156
Score = 23.9 bits (50), Expect = 3.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 150 EHHHHHH 156
>pdb|1JXQ|A Chain A, Structure Of Cleaved, Card Domain Deleted Caspase-9
pdb|1JXQ|C Chain C, Structure Of Cleaved, Card Domain Deleted Caspase-9
pdb|1JXQ|B Chain B, Structure Of Cleaved, Card Domain Deleted Caspase-9
pdb|1JXQ|D Chain D, Structure Of Cleaved, Card Domain Deleted Caspase-9
Length = 284
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
+ HHHHHH
Sbjct: 277 TSHHHHHH 284
>pdb|1E0R|B Chain B, Beta-Apical Domain Of Thermosome
Length = 159
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 13 NSQHHHHHH 21
+ HHHHHH
Sbjct: 151 SKNHHHHHH 159
>pdb|3HAD|A Chain A, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
pdb|3HAD|B Chain B, Biochemical Characterization And Structure Determination
Of Human Heart Short Chain L-3-Hydroxyacyl Coa
Dehydrogenase Provide Insight Into Catalytic Mechanism
Length = 308
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 302 KHHHHHH 308
>pdb|1IK6|A Chain A, 3d Structure Of The E1beta Subunit Of Pyruvate
Dehydrogenase From The Archeon Pyrobaculum Aerophilum
Length = 369
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 16 HHHHHHA 22
HHHHHH+
Sbjct: 1 HHHHHHS 7
>pdb|1F6L|L Chain L, Variable Light Chain Dimer Of Anti-Ferritin Antibody
Length = 114
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 108 RHHHHHH 114
>pdb|1TNM| Titin Module M5 (Connectin) (Nmr, Minimized Average Structure)
pdb|1TNN| Titin Module M5 (Connectin) (Nmr, 16 Structures)
Length = 100
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 16 HHHHHHA 22
HHHHHH+
Sbjct: 2 HHHHHHS 8
>pdb|1D8W|D Chain D, L-Rhamnose Isomerase
pdb|1D8W|A Chain A, L-Rhamnose Isomerase
pdb|1D8W|B Chain B, L-Rhamnose Isomerase
pdb|1D8W|C Chain C, L-Rhamnose Isomerase
Length = 426
Score = 23.5 bits (49), Expect = 4.6
Identities = 9/22 (40%), Positives = 11/22 (49%)
Query: 30 GEHHHHNAQQHAEQQAEQQAQQ 51
G HHHH+ EQ E Q+
Sbjct: 1 GHHHHHHXTTQLEQAWELAKQR 22
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 2 HHHHHH 7
>pdb|1GZU|A Chain A, Crystal Structure Of Human Nicotinamide Mononucleotide
Adenylyltransferase In Complex With Nmn
pdb|1GZU|B Chain B, Crystal Structure Of Human Nicotinamide Mononucleotide
Adenylyltransferase In Complex With Nmn
pdb|1GZU|C Chain C, Crystal Structure Of Human Nicotinamide Mononucleotide
Adenylyltransferase In Complex With Nmn
Length = 290
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/11 (54%), Positives = 10/11 (90%)
Query: 22 AHHHHYYGGEH 32
+HHHH++G E+
Sbjct: 4 SHHHHHHGSEN 14
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/15 (40%), Positives = 11/15 (73%)
Query: 29 GGEHHHHNAQQHAEQ 43
G HHHH+ +++E+
Sbjct: 3 GSHHHHHHGSENSEK 17
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1GML|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|B Chain B, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|C Chain C, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GML|D Chain D, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Triclinic)
pdb|1GN1|A Chain A, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|B Chain B, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|C Chain C, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|D Chain D, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|E Chain E, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|F Chain F, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|G Chain G, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
pdb|1GN1|H Chain H, Crystal Structure Of The Mouse Cct Gamma Apical Domain
(Monoclinic)
Length = 178
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 14 SQHHHHHH 21
+ HHHHHH
Sbjct: 171 ASHHHHHH 178
>pdb|1IFQ|B Chain B, Sec22b N-Terminal Domain
pdb|1IFQ|A Chain A, Sec22b N-Terminal Domain
Length = 138
Score = 23.5 bits (49), Expect = 4.6
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 2/56 (3%)
Query: 16 HHHHHHAHHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQQNQQ 71
HHHHHH + Q+ EQ + QQ Q+ Q +Q ++ N+Q
Sbjct: 5 HHHHHHGSVLLTXIARVADGLPLAASXQEDEQSGRDLQQYQS--QAKQLFRKLNEQ 58
>pdb|1FXK|A Chain A, Crystal Structure Of Archaeal Prefoldin (Gimc)
Length = 107
Score = 23.5 bits (49), Expect = 4.6
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 39 QHAEQQAEQQAQQQQQQQAHQQQQQKAQQQ 68
Q+ + Q Q Q QQQ QA Q+Q + Q
Sbjct: 1 QNVQHQLAQFQQLQQQAQAISVQKQTVEXQ 30
>pdb|1MO0|A Chain A, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
pdb|1MO0|B Chain B, Structural Genomics Of Caenorhabditis Elegans: Triose
Phosphate Isomerase
Length = 275
Score = 23.5 bits (49), Expect = 4.6
Identities = 7/13 (53%), Positives = 7/13 (53%)
Query: 16 HHHHHHAHHHHYY 28
HHHHHH Y
Sbjct: 5 HHHHHHLESTSLY 17
>pdb|1HT1|E Chain E, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1HT1|F Chain F, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1HT1|G Chain G, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1HT1|I Chain I, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1HT2|E Chain E, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1HT2|F Chain F, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1HT2|G Chain G, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1HT2|H Chain H, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1HQY|E Chain E, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1HQY|F Chain F, Nucleotide-Dependent Conformational Changes In A
Protease- Associated Atpase Hslu
pdb|1E94|E Chain E, Hslv-Hslu From E.Coli
pdb|1E94|F Chain F, Hslv-Hslu From E.Coli
Length = 449
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 16 HHHHHHA 22
HHHHHH+
Sbjct: 2 HHHHHHS 8
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1 HHHHHH 6
>pdb|1NCT| Titin Module M5, N-Terminally Extended, Nmr
pdb|1NCU| Titin Module M5, N-Terminally Extended, Nmr
Length = 106
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 16 HHHHHHA 22
HHHHHH+
Sbjct: 2 HHHHHHS 8
>pdb|1JFZ|B Chain B, Crystal Structure Of Mn(Ii)-Complex Of Rnase Iii
Endonuclease Domain From Aquifex Aeolicus At 2.10
Angstrom Resolution
pdb|1JFZ|C Chain C, Crystal Structure Of Mn(Ii)-Complex Of Rnase Iii
Endonuclease Domain From Aquifex Aeolicus At 2.10
Angstrom Resolution
pdb|1JFZ|A Chain A, Crystal Structure Of Mn(Ii)-Complex Of Rnase Iii
Endonuclease Domain From Aquifex Aeolicus At 2.10
Angstrom Resolution
pdb|1JFZ|D Chain D, Crystal Structure Of Mn(Ii)-Complex Of Rnase Iii
Endonuclease Domain From Aquifex Aeolicus At 2.10
Angstrom Resolution
Length = 154
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 15 QHHHHHH 21
+HHHHHH
Sbjct: 148 RHHHHHH 154
>pdb|1A1V|A Chain A, Hepatitis C Virus Ns3 Helicase Domain Complexed With
Single Stranded Dna
Length = 476
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/9 (66%), Positives = 7/9 (77%)
Query: 13 NSQHHHHHH 21
+ HHHHHH
Sbjct: 468 SGSHHHHHH 476
>pdb|1TIT| Titin, Ig Repeat 27, Nmr, Minimized Average Structure
pdb|1TIU| Titin, Ig Repeat 27, Nmr, 24 Structures
Length = 98
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 16 HHHHHHA 22
HHHHHH+
Sbjct: 2 HHHHHHS 8
>pdb|1SKN|P Chain P, The Binding Domain Of Skn-1 In Complex With Dna: A New
Dna-Binding Motif
Length = 92
Score = 23.5 bits (49), Expect = 4.6
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 29 GGEHHHHNAQQHAEQQAEQQ 48
G HHHH+ Q+ +Q++ +
Sbjct: 2 GHHHHHHSGQRKRGRQSKDE 21
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 16 HHHHHHA 22
HHHHHH+
Sbjct: 3 HHHHHHS 9
Score = 22.7 bits (47), Expect = 7.9
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Query: 23 HHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQ 67
HHHH++ G+ Q EQ A Q + + QQ
Sbjct: 3 HHHHHHSGQ-RKRGRQSKDEQLASDNELPVSAFQISEMSLSELQQ 46
>pdb|1CQX|A Chain A, Crystal Structure Of The Flavohemoglobin From
Alcaligenes Eutrophus At 1.75 A Resolution
pdb|1CQX|B Chain B, Crystal Structure Of The Flavohemoglobin From
Alcaligenes Eutrophus At 1.75 A Resolution
Length = 403
Score = 23.5 bits (49), Expect = 4.6
Identities = 10/12 (83%), Positives = 10/12 (83%)
Query: 1 MAHHEQQQQQQA 12
MAH EQ QQQQA
Sbjct: 45 MAHQEQGQQQQA 56
>pdb|1BPV| Titin Module A71 From Human Cardiac Muscle, Nmr, 50 Structures
Length = 112
Score = 23.5 bits (49), Expect = 4.6
Identities = 6/7 (85%), Positives = 7/7 (99%)
Query: 16 HHHHHHA 22
HHHHHH+
Sbjct: 2 HHHHHHS 8
>pdb|1GX3|A Chain A, M. Smegmatis Arylamine N-Acetyl Transferase
pdb|1GX3|B Chain B, M. Smegmatis Arylamine N-Acetyl Transferase
pdb|1GX3|C Chain C, M. Smegmatis Arylamine N-Acetyl Transferase
pdb|1GX3|D Chain D, M. Smegmatis Arylamine N-Acetyl Transferase
Length = 284
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1 HHHHHH 6
>pdb|1E5E|A Chain A, Methionine Gamma-Lyase (Mgl) From Trichomonas Vaginalis In
Complex With Propargylglycine
pdb|1E5E|B Chain B, Methionine Gamma-Lyase (Mgl) From Trichomonas Vaginalis In
Complex With Propargylglycine
pdb|1E5F|A Chain A, Methionine Gamma-Lyase (Mgl) From Trichomonas Vaginalis
pdb|1E5F|B Chain B, Methionine Gamma-Lyase (Mgl) From Trichomonas Vaginalis
Length = 404
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 399 HHHHHH 404
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated
Protein Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated
Protein Kinase Domain
Length = 387
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
Score = 22.7 bits (47), Expect = 7.9
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 14 SQHHHHHHAHHHHYYGG 30
S HHHHH + Y G
Sbjct: 4 SHHHHHHGSKVRGKYDG 20
>pdb|1NED|A Chain A, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
Resolution
pdb|1NED|B Chain B, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
Resolution
pdb|1NED|C Chain C, Crystal Structure Of Hslv (Clpq) At 3.8 Angstroms
Resolution
Length = 183
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 178 HHHHHH 183
Score = 22.7 bits (47), Expect = 7.9
Identities = 7/18 (38%), Positives = 10/18 (54%)
Query: 3 HHEQQQQQQANSQHHHHH 20
H ++ +A HHHHH
Sbjct: 166 HTIEELSYKAEFHHHHHH 183
>pdb|1JT7|D Chain D, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag And Leu 44 Replaced By
Phe And Leu 73 Replaced By Val And Val 109 Replaced By
Leu (L44fL73VV109L)
pdb|1JT7|B Chain B, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag And Leu 44 Replaced By
Phe And Leu 73 Replaced By Val And Val 109 Replaced By
Leu (L44fL73VV109L)
pdb|1JT7|A Chain A, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag And Leu 44 Replaced By
Phe And Leu 73 Replaced By Val And Val 109 Replaced By
Leu (L44fL73VV109L)
pdb|1JT7|C Chain C, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag And Leu 44 Replaced By
Phe And Leu 73 Replaced By Val And Val 109 Replaced By
Leu (L44fL73VV109L)
Length = 146
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1 HHHHHH 6
>pdb|1J6W|A Chain A, Crystal Structure Of Haemophilus Influenzae Luxs
pdb|1J6W|B Chain B, Crystal Structure Of Haemophilus Influenzae Luxs
Length = 175
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 170 HHHHHH 175
>pdb|1KKL|A Chain A, L.Casei HprkP IN COMPLEX WITH B.SUBTILIS HPR
pdb|1KKL|B Chain B, L.Casei HprkP IN COMPLEX WITH B.SUBTILIS HPR
pdb|1KKL|C Chain C, L.Casei HprkP IN COMPLEX WITH B.SUBTILIS HPR
pdb|1KKM|A Chain A, L.Casei HprkP IN COMPLEX WITH B.SUBTILIS P-Ser-Hpr
pdb|1KKM|B Chain B, L.Casei HprkP IN COMPLEX WITH B.SUBTILIS P-Ser-Hpr
pdb|1KKM|C Chain C, L.Casei HprkP IN COMPLEX WITH B.SUBTILIS P-Ser-Hpr
Length = 205
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 29 GGEHHHHNAQQHAEQQAEQQ 48
G HHHH+ + + Q ++
Sbjct: 3 GSHHHHHHGSMYLDSQLAER 22
>pdb|1GPP|A Chain A, Crystal Structure Of The S.Cerevisiae Homing
Endonuclease Pi-Scei Domain I
Length = 237
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 2 HHHHHH 7
>pdb|1II0|B Chain B, Crystal Structure Of The Escherichia Coli Arsenite-
Translocating Atpase
pdb|1II0|A Chain A, Crystal Structure Of The Escherichia Coli Arsenite-
Translocating Atpase
pdb|1II9|B Chain B, Crystal Structure Of The Escherichia Coli Arsenite-
Translocating Atpase In Complex With Amp-Pnp
pdb|1F48|A Chain A, Crystal Structure Of The Escherichia Coli Arsenite-
Translocating Atpase
pdb|1II9|A Chain A, Crystal Structure Of The Escherichia Coli Arsenite-
Translocating Atpase In Complex With Amp-Pnp
pdb|1IHU|A Chain A, Crystal Structure Of The Escherichia Coli Arsenite-
Translocating Atpase In Complex With Mg-Adp-Alf3
Length = 589
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 584 HHHHHH 589
>pdb|1K5V|A Chain A, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag With Asn106 Replaced
By Gly (N106g).
pdb|1K5V|B Chain B, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag With Asn106 Replaced
By Gly (N106g)
Length = 146
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1 HHHHHH 6
>pdb|1E52|A Chain A, Solution Structure Of Escherichia Coli Uvrb C-Terminal
Domain
pdb|1E52|B Chain B, Solution Structure Of Escherichia Coli Uvrb C-Terminal
Domain
Length = 63
Score = 23.1 bits (48), Expect = 6.1
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 23 HHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQQNQQ 71
HHHH+ ++ + A QQ + + Q A + ++A Q Q
Sbjct: 3 HHHHHLEPDNVPMDMSPKALQQKIHELEGLMMQHAQNLEFEEAAQIRDQ 51
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 2 HHHHHH 7
>pdb|1IM4|A Chain A, Crystal Structure Of A Dinb Homolog (Dbh) Lesion Bypass
Dna Polymerase Catalytic Fragment From Sulfolobus
Solfataricus
Length = 221
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1 HHHHHH 6
>pdb|1GOL| Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At
Position 52
Length = 364
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1 HHHHHH 6
>pdb|1JAK|A Chain A, Streptomyces Plicatus Beta-N-Acetylhexosaminidase In
Complex With (2r,3r,4s,5r)-2-Acetamido-3,4-Dihydroxy-5-
Hydroxymethyl-Piperidinium Chloride (Ifg)
pdb|1HP5|A Chain A, Streptomyces Plicatus Beta-N-Acetylhexosaminidase
Complexed With Intermediate Analouge Nag-Thiazoline
pdb|1HP4|A Chain A, Crystal Structure Of Streptomyces Plicatus Beta-N-
Acetylhexosaminidase
Length = 512
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 3 HHHHHH 8
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 2 HHHHHH 7
>pdb|1BPR| Nmr Structure Of The Substrate Binding Domain Of Dnak, Minimized
Average Structure
pdb|2BPR| Nmr Structure Of The Substrate Binding Domain Of Dnak, 25
Structures
Length = 191
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 4 HHHHHH 9
>pdb|1KW4|A Chain A, Polyhomeotic Sam Domain Structure
Length = 89
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 84 HHHHHH 89
>pdb|1KID| Groel (Hsp60 Class) Fragment (Apical Domain) Comprising Residues
191-376, Mutant With Ala 262 Replaced With Leu And Ile
267 Replaced With Met
Length = 203
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1HR6|A Chain A, Yeast Mitochondrial Processing Peptidase
pdb|1HR6|G Chain G, Yeast Mitochondrial Processing Peptidase
pdb|1HR7|A Chain A, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
pdb|1HR6|E Chain E, Yeast Mitochondrial Processing Peptidase
pdb|1HR6|C Chain C, Yeast Mitochondrial Processing Peptidase
pdb|1HR8|A Chain A, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Cytochrome C Oxidase Iv Signal Peptide
pdb|1HR9|A Chain A, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Malate Dehydrogenase Signal Peptide
pdb|1HR9|G Chain G, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Malate Dehydrogenase Signal Peptide
pdb|1HR7|G Chain G, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
pdb|1HR7|E Chain E, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
pdb|1HR8|C Chain C, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Cytochrome C Oxidase Iv Signal Peptide
pdb|1HR8|G Chain G, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Cytochrome C Oxidase Iv Signal Peptide
pdb|1HR9|C Chain C, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Malate Dehydrogenase Signal Peptide
pdb|1HR9|E Chain E, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Malate Dehydrogenase Signal Peptide
pdb|1HR8|E Chain E, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Complexed With Cytochrome C Oxidase Iv Signal Peptide
pdb|1HR7|C Chain C, Yeast Mitochondrial Processing Peptidase Beta-E73q Mutant
Length = 475
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 470 HHHHHH 475
>pdb|1HSK|A Chain A, Crystal Structure Of S. Aureus Murb
Length = 326
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1K5U|C Chain C, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag With His93 Replaced By
Gly (H93g).
pdb|1K5U|A Chain A, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag With His93 Replaced By
Gly (H93g).
pdb|1K5U|B Chain B, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag With His93 Replaced By
Gly (H93g)
Length = 146
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1 HHHHHH 6
>pdb|1J5H|A Chain A, Solution Structure Of Apo-Neocarzinostatin
pdb|1J5I|A Chain A, Solution Structure Of A Novel Chromoprotein Derived From
Apo-Neocarzinostatin And A Synthetic Chromophore
Length = 122
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1 HHHHHH 6
>pdb|1BGQ| Radicicol Bound To The Atp Binding Site Of The N-Terminal Domain
Of The Yeast Hsp90 Chaperone
Length = 225
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1ESJ|A Chain A, Crystal Structure Of Thiazole Kinase Mutant (C198s)
pdb|1ESJ|B Chain B, Crystal Structure Of Thiazole Kinase Mutant (C198s)
pdb|1ESJ|C Chain C, Crystal Structure Of Thiazole Kinase Mutant (C198s)
pdb|1ESQ|C Chain C, Crystal Structure Of Thiazole Kinase Mutant (C198s) With
Atp And Thiazole Phosphate.
pdb|1ESQ|A Chain A, Crystal Structure Of Thiazole Kinase Mutant (C198s) With
Atp And Thiazole Phosphate.
pdb|1ESQ|B Chain B, Crystal Structure Of Thiazole Kinase Mutant (C198s) With
Atp And Thiazole Phosphate
Length = 284
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/18 (38%), Positives = 10/18 (54%)
Query: 29 GGEHHHHNAQQHAEQQAE 46
G HHHH+ A+ A+
Sbjct: 3 GSHHHHHHGSMDAQSAAK 20
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1FKM|A Chain A, Crystal Structure Of The YptRAB-Gap Domain Of Gyp1p
Length = 396
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 391 HHHHHH 396
>pdb|1L8W|A Chain A, Crystal Structure Of Lyme Disease Variable Surface
Antigen Vlse Of Borrelia Burgdorferi
pdb|1L8W|B Chain B, Crystal Structure Of Lyme Disease Variable Surface
Antigen Vlse Of Borrelia Burgdorferi
pdb|1L8W|C Chain C, Crystal Structure Of Lyme Disease Variable Surface
Antigen Vlse Of Borrelia Burgdorferi
pdb|1L8W|D Chain D, Crystal Structure Of Lyme Disease Variable Surface
Antigen Vlse Of Borrelia Burgdorferi
Length = 348
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1KKL|H Chain H, L.Casei HprkP IN COMPLEX WITH B.SUBTILIS HPR
pdb|1KKL|I Chain I, L.Casei HprkP IN COMPLEX WITH B.SUBTILIS HPR
pdb|1KKL|J Chain J, L.Casei HprkP IN COMPLEX WITH B.SUBTILIS HPR
Length = 100
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1JLJ|A Chain A, 1.6 Angstrom Crystal Structure Of The Human Neuroreceptor
Anchoring And Molybdenum Cofactor Biosynthesis Protein
Gephyrin
pdb|1JLJ|B Chain B, 1.6 Angstrom Crystal Structure Of The Human Neuroreceptor
Anchoring And Molybdenum Cofactor Biosynthesis Protein
Gephyrin
pdb|1JLJ|C Chain C, 1.6 Angstrom Crystal Structure Of The Human Neuroreceptor
Anchoring And Molybdenum Cofactor Biosynthesis Protein
Gephyrin
Length = 189
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 184 HHHHHH 189
>pdb|1I4W|A Chain A, The Crystal Structure Of The Transcription Factor
Sc-Mttfb Offers Intriguing Insights Into Mitochondrial
Transcription
Length = 353
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In
Complex With Dodecanoic Acid To 1.85 Resolution
pdb|1EK4|B Chain B, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In
Complex With Dodecanoic Acid To 1.85 Resolution
pdb|1EK4|C Chain C, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In
Complex With Dodecanoic Acid To 1.85 Resolution
pdb|1EK4|D Chain D, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In
Complex With Dodecanoic Acid To 1.85 Resolution
Length = 418
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1D2N|A Chain A, D2 Domain Of N-Ethylmaleimide-Sensitive Fusion Protein
Length = 272
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|2IF1| Human Translation Initiation Factor Eif1, Nmr, 29 Structures
Length = 126
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1ILG|A Chain A, Crystal Structure Of Apo Human Pregnane X Receptor
Ligand Binding Domain
pdb|1ILH|A Chain A, Crystal Structure Of Human Pregnane X Receptor Ligand
Binding Domain Bound To Sr12813
Length = 316
Score = 23.1 bits (48), Expect = 6.1
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 29 GGEHHHHNAQQHAEQQAEQQAQQQQQQ 55
G HHHH +++ Q Q ++Q+
Sbjct: 4 GHHHHHHGSERTGTQPLGVQGLTEEQR 30
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 23 HHHHYYGGE 31
HHHH++G E
Sbjct: 5 HHHHHHGSE 13
>pdb|1JB1|A Chain A, Lactobacillus Casei HprkP BOUND TO PHOSPHATE
Length = 205
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
Score = 22.7 bits (47), Expect = 7.9
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 29 GGEHHHHNAQQHAEQQAEQQ 48
G HHHH+ + + Q ++
Sbjct: 3 GSHHHHHHGSXYLDSQLAER 22
>pdb|1G5H|D Chain D, Crystal Structure Of The Accessory Subunit Of Murine
Mitochondrial Polymerase Gamma
pdb|1G5H|A Chain A, Crystal Structure Of The Accessory Subunit Of Murine
Mitochondrial Polymerase Gamma
pdb|1G5H|C Chain C, Crystal Structure Of The Accessory Subunit Of Murine
Mitochondrial Polymerase Gamma
pdb|1G5H|B Chain B, Crystal Structure Of The Accessory Subunit Of Murine
Mitochondrial Polymerase Gamma
Length = 454
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 449 HHHHHH 454
>pdb|1J6P|A Chain A, Crystal Structure Of Conserved Hypothetical
Protein(Tm0936) From Thermotoga Maritima At 1.9 A
Resolution
Length = 418
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 7 HHHHHH 12
>pdb|1K74|D Chain D, The 2.3 Angstrom Resolution Crystal Structure Of The
Heterodimer Of The Human Ppargamma And Rxralpha Ligand
Binding Domains Respectively Bound With Gw409544 And
9-Cis Retinoic Acid And Co-Activator Peptides
Length = 283
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Query: 30 GEHHHHNAQQHAEQQA 45
G HHHH+ + A+ +A
Sbjct: 4 GHHHHHHGPESADLRA 19
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
>pdb|1HW4|A Chain A, Structure Of Thymidylate Synthase Suggests Advantages Of
Chemotherapy With Noncompetitive Inhibitors
Length = 355
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 3 HHHHHH 8
>pdb|1LRZ|A Chain A, X-Ray Crystal Structure Of Staphylococcus Aureus Fema
Length = 426
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 421 HHHHHH 426
>pdb|1J5S|A Chain A, Crystal Structure Of Uronate Isomerase (Tm0064) From
Thermotoga Maritima At 2.85 A Resolution
pdb|1J5S|B Chain B, Crystal Structure Of Uronate Isomerase (Tm0064) From
Thermotoga Maritima At 2.85 A Resolution
pdb|1J5S|C Chain C, Crystal Structure Of Uronate Isomerase (Tm0064) From
Thermotoga Maritima At 2.85 A Resolution
Length = 463
Score = 23.1 bits (48), Expect = 6.1
Identities = 7/13 (53%), Positives = 9/13 (68%)
Query: 21 HAHHHHYYGGEHH 33
H HHHH + GE +
Sbjct: 7 HHHHHHMFLGEDY 19
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 7 HHHHHH 12
>pdb|1JTC|D Chain D, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag And Leu 44 Replaced By
Phe (L44f)
pdb|1JTC|A Chain A, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag And Leu 44 Replaced By
Phe (L44f)
pdb|1JTC|B Chain B, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag And Leu 44 Replaced By
Phe (L44f)
pdb|1JTC|C Chain C, Human Acidic Fibroblast Growth Factor. 141 Amino Acid
Form With Amino Terminal His Tag And Leu 44 Replaced By
Phe (L44f)
Length = 146
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1 HHHHHH 6
>pdb|1J5R|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0920) From
Thermotoga Maritima At 1.4 A Resolution
pdb|1J5R|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0920) From
Thermotoga Maritima At 1.4 A Resolution
Length = 371
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 7 HHHHHH 12
>pdb|1IWG|A Chain A, Crystal Structure Of Bacterial Multidrug Efflux Transporter
Acrb
Length = 1053
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 1048 HHHHHH 1053
Score = 22.7 bits (47), Expect = 7.9
Identities = 9/22 (40%), Positives = 9/22 (40%), Gaps = 5/22 (22%)
Query: 13 NSQHHHHHHAHHHHYYGGEHHH 34
N H H HHH HHH
Sbjct: 1037 NEDIEHSHTVDHHH-----HHH 1053
>pdb|1QOJ|B Chain B, Crystal Structure Of E.Coli Uvrb C-Terminal Domain, And
A Model For Uvrb-Uvrc Interaction.
pdb|1QOJ|A Chain A, Crystal Structure Of E.Coli Uvrb C-Terminal Domain, And
A Model For Uvrb-Uvrc Interaction
Length = 63
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 2 HHHHHH 7
Score = 23.1 bits (48), Expect = 6.1
Identities = 12/49 (24%), Positives = 21/49 (42%)
Query: 23 HHHHYYGGEHHHHNAQQHAEQQAEQQAQQQQQQQAHQQQQQKAQQQNQQ 71
HHHH+ ++ + A QQ + + Q A + ++A Q Q
Sbjct: 3 HHHHHLEPDNVPXDXSPKALQQKIHELEGLXXQHAQNLEFEEAAQIRDQ 51
>pdb|1C3Q|X Chain X, Crystal Structure Of Native Thiazole Kinase In The
Monoclinic Form
pdb|1C3Q|Y Chain Y, Crystal Structure Of Native Thiazole Kinase In The
Monoclinic Form
pdb|1C3Q|Z Chain Z, Crystal Structure Of Native Thiazole Kinase In The
Monoclinic Form
Length = 12
Score = 23.1 bits (48), Expect = 6.1
Identities = 6/6 (100%), Positives = 6/6 (100%)
Query: 16 HHHHHH 21
HHHHHH
Sbjct: 5 HHHHHH 10
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.311 0.112 0.342
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 383,775
Number of Sequences: 13198
Number of extensions: 13993
Number of successful extensions: 1041
Number of sequences better than 10.0: 317
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 45
Number of HSP's gapped (non-prelim): 790
length of query: 72
length of database: 2,899,336
effective HSP length: 48
effective length of query: 24
effective length of database: 2,265,832
effective search space: 54379968
effective search space used: 54379968
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 47 (22.7 bits)