BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646103|ref|NP_208285.1| UDP-MurNac-tripeptide
synthetase (murE) [Helicobacter pylori 26695]
(447 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1E8C|B Chain B, Structure Of Mure The Udp-N-Acetylmuram... 181 1e-46
pdb|1J6U|A Chain A, Crystal Structure Of Udp-N-Acetylmurama... 60 6e-10
pdb|1EEH|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutam... 53 8e-08
pdb|3UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutam... 50 4e-07
pdb|1FGS| Folylpolyglutamate Synthetase From Lactobacillu... 35 0.017
pdb|1JBW|A Chain A, Fpgs-Amppcp-Folate Complex >gi|15988306... 35 0.017
pdb|1GG4|A Chain A, Crystal Structure Of Escherichia Coli U... 32 0.11
pdb|1DLJ|A Chain A, The First Structure Of Udp-Glucose Dehy... 30 0.42
pdb|1DLI|A Chain A, The First Structure Of Udp-Glucose Dehy... 30 0.42
pdb|1ESM|A Chain A, Structural Basis For The Feedback Regul... 30 0.55
pdb|1K8K|D Chain D, Crystal Structure Of Arp23 COMPLEX 28 2.1
pdb|2YAS|A Chain A, Hydroxynitrile Lyase From Hevea Brasili... 28 2.1
pdb|1GL9|B Chain B, Archaeoglobus Fulgidus Reverse Gyrase C... 27 3.6
pdb|1GKU|B Chain B, Reverse Gyrase From Archaeoglobus Fulgidus 27 3.6
pdb|1GC7|A Chain A, Crystal Structure Of The Radixin Ferm D... 26 8.0
>pdb|1E8C|B Chain B, Structure Of Mure The Udp-N-Acetylmuramyl Tripeptide
Synthetase From E. Coli
pdb|1E8C|A Chain A, Structure Of Mure The Udp-N-Acetylmuramyl Tripeptide
Synthetase From E. Coli
Length = 498
Score = 181 bits (459), Expect = 1e-46
Identities = 127/387 (32%), Positives = 201/387 (51%), Gaps = 24/387 (6%)
Query: 67 IKIVGITGTNGKTTTASLMYSLLLDLNKKTALLGTRGFFINNERIKEKGLTTPTLLELYS 126
+++VG+TGTNGKTTT L+ L + +A+ GT G + + I + TT + +++
Sbjct: 108 LRLVGVTGTNGKTTTTQLLAQWSQLLGEISAVXGTVGNGLLGKVIPTEN-TTGSAVDVQH 166
Query: 127 DLEEAVRLKCEYFIMEVSSHAIVQKRIAGLDFALKILTNITSDHLDFHQSIENYRDAKNS 186
+L V + EVSSH +VQ R+A L FA + TN++ DHLD+H E+Y A
Sbjct: 167 ELAGLVDQGATFCAXEVSSHGLVQHRVAALKFAASVFTNLSRDHLDYHGDXEHYEAAXWL 226
Query: 187 FFKDE--GLKVINRD-ETNALFNPVNAHTYALDKKAHLN-------VQAFSLNPSIS-AS 235
+ + G +IN D E + A+ + H+N ++A +N S A+
Sbjct: 227 LYSEHHCGQAIINADDEVGRRWLAKLPDAVAVSXEDHINPNCHGRWLKATEVNYHDSGAT 286
Query: 236 LCYQQDLRDPNFKEIALMHSPLLGRYNLYNILAGVLGVKLLTQLPLETIVPLLENFYGVK 295
+ + D + S L G +N+ N+L L L PL ++ V
Sbjct: 287 IRFSSSWGDGEIE------SHLXGAFNVSNLLLA-LATLLALGYPLADLLKTAARLQPVC 339
Query: 296 GRLEIVHS--KPLVVVDFAHTIDGMQQVFESFKNQ---KITALFGAGGDRDKTKRPEMGA 350
GR E+ + KP VVVD+AHT D +++ ++ + K+ +FG GGDRDK KRP GA
Sbjct: 340 GRXEVFTAPGKPTVVVDYAHTPDALEKALQAARLHCAGKLWCVFGCGGDRDKGKRPLXGA 399
Query: 351 IASYYAHKIILTSDNPRSENEEDIIKDILKGINDSSKVIVEKDRKKAILNALENLKDDEV 410
IA +A ++T DNPR+E II DIL G D+ V + R +A+ A+ K+++V
Sbjct: 400 IAEEFADVAVVTDDNPRTEEPRAIINDILAGXLDAGHAKVXEGRAEAVTCAVXQAKENDV 459
Query: 411 LLILGKGDENIQIFKDKTIFFSDQEVV 437
+L+ GKG E+ QI ++ + +SD+ V
Sbjct: 460 VLVAGKGHEDYQIVGNQRLDYSDRVTV 486
>pdb|1J6U|A Chain A, Crystal Structure Of Udp-N-Acetylmuramate--Alanine Ligase
(Tm0231) From Thermotoga Maritima At 2.3 A Resolution
Length = 469
Score = 59.7 bits (143), Expect = 6e-10
Identities = 95/389 (24%), Positives = 151/389 (38%), Gaps = 73/389 (18%)
Query: 72 ITGTNGKTTTASLMYSLLLDLNKK-TALLGTRGFFINNERIKEKGLTTPTLLELYSDLEE 130
+TGT+GKTTT + + +L L K T LG G + E + P + EL
Sbjct: 119 VTGTDGKTTTTAXVAHVLKHLRKSPTVFLG--GIXDSLEHGNYEKGNGPVVYELD----- 171
Query: 131 AVRLKCEYFIMEVSSHAIVQKRIAGLDFALKILTNITSDHLD-FHQSIENYRDAKNSFFK 189
+ E F E S + + I+TN DHL+ + S+ YR A +
Sbjct: 172 ----ESEEFFSEFSPNYL-------------IITNARGDHLENYGNSLTRYRSAFEKISR 214
Query: 190 DEGLKV-INRDETNALFNP----VNAHTYALDKKAHLNVQAFSLNPSISASLCYQQDLRD 244
+ L V DE + V TY L+ + SAS Q+ +
Sbjct: 215 NTDLVVTFAEDELTSHLGDVTFGVKKGTYTLEXR--------------SASRAEQKAXVE 260
Query: 245 PNFKEIALMHSPLLGRYNLYNILAGVLGVKLLTQLPLETIVPLLENFYGVKGRLEIVHSK 304
N K + + G +N+ N LA V+ + L ++ LE F GV R I
Sbjct: 261 KNGKRYLELKLKVPGFHNVLNALA-VIALFDSLGYDLAPVLEALEEFRGVHRRFSIAFHD 319
Query: 305 P----LVVVDFAHTIDG----MQQVFESFKNQKITALFGAGGDRDKTKRPEMGAIASYYA 356
P V+ D+AHT D +Q E F+N+KI +F + A A A
Sbjct: 320 PETNIYVIDDYAHTPDEIRNLLQTAKEVFENEKIVVIFQPHRYSRLEREDGNFAKALQLA 379
Query: 357 HKIILTSDNPRSENEED-----IIKDILKGINDSSKVIVEKDRKKAILNALENLKDDEVL 411
++++T E +++ I D LK + + + + + +++ EN V
Sbjct: 380 DEVVVTEVYDAFEEKKNGISGKXIWDSLKSLGKEAYFVEKLPELEKVISVSEN----TVF 435
Query: 412 LILGKGDENIQIFKDKTIFFSDQEVVKSY 440
L +G GD I +S + V+ Y
Sbjct: 436 LFVGAGD----------IIYSSRRFVERY 454
>pdb|1EEH|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|1E0D|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
Length = 437
Score = 52.8 bits (125), Expect = 8e-08
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 40/237 (16%)
Query: 69 IVGITGTNGKTTTASLMYSLLLDLNKKTALLGTRGFFINNERIKEKGLTTPTLLELYSDL 128
IV ITG+NGK+T +L+ + + G G P L+ L +
Sbjct: 106 IVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGL--------------PALMLLDDE- 150
Query: 129 EEAVRLKCEYFIMEVSSHAIVQKRIAGLDFALKILTNITSDHLD-FHQSIENYRDAKNSF 187
CE +++E+SS + + + L + N+T DH+D + ++ YR AK
Sbjct: 151 -------CELYVLELSSFQL--ETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAKLRI 201
Query: 188 FKDEGLKVINRDETNALFNPVNAHTYALDKKAHLNVQAFSLNPSISASLCYQQD---LRD 244
+++ + V+N D+ AL P+ + A +F +N L +QQ LR
Sbjct: 202 YENAKVCVVNADD--ALTMPI--------RGADERCVSFGVNMG-DYHLNHQQGETWLRV 250
Query: 245 PNFKEIALMHSPLLGRYNLYNILAGVLGVKLLTQLPLETIVPLLENFYGVKGRLEIV 301
K + + L G++N N LA L + LP + + L F G+ R E+V
Sbjct: 251 KGEKVLNVKEMKLSGQHNYTNALA-ALALADAAGLPRASSLKALTTFTGLPHRFEVV 306
>pdb|3UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|4UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|2UAG|A Chain A, Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
pdb|1UAG| Udp-N-Acetylmuramoyl-L-Alanine:d-Glutamate Ligase
Length = 437
Score = 50.4 bits (119), Expect = 4e-07
Identities = 59/237 (24%), Positives = 100/237 (41%), Gaps = 40/237 (16%)
Query: 69 IVGITGTNGKTTTASLMYSLLLDLNKKTALLGTRGFFINNERIKEKGLTTPTLLELYSDL 128
IV ITG+NGK+T +L+ + + G G P L+ L +
Sbjct: 106 IVAITGSNGKSTVTTLVGEMAKAAGVNVGVGGNIGL--------------PALMLLDDE- 150
Query: 129 EEAVRLKCEYFIMEVSSHAIVQKRIAGLDFALKILTNITSDHLD-FHQSIENYRDAKNSF 187
CE +++E+SS + + + L + N+T DH+D + ++ YR A
Sbjct: 151 -------CELYVLELSSFQL--ETTSSLQAVAATILNVTEDHMDRYPFGLQQYRAAXLRI 201
Query: 188 FKDEGLKVINRDETNALFNPVNAHTYALDKKAHLNVQAFSLNPSISASLCYQQD---LRD 244
+++ + V+N D+ AL P+ + A +F +N L +QQ LR
Sbjct: 202 YENAKVCVVNADD--ALTMPI--------RGADERCVSFGVNMG-DYHLNHQQGETWLRV 250
Query: 245 PNFKEIALMHSPLLGRYNLYNILAGVLGVKLLTQLPLETIVPLLENFYGVKGRLEIV 301
K + + L G++N N LA L + LP + + L F G+ R E+V
Sbjct: 251 KGEKVLNVKEMKLSGQHNYTNALA-ALALADAAGLPRASSLKALTTFTGLPHRFEVV 306
>pdb|1FGS| Folylpolyglutamate Synthetase From Lactobacillus Casei
Length = 428
Score = 35.0 bits (79), Expect = 0.017
Identities = 27/101 (26%), Positives = 46/101 (44%), Gaps = 11/101 (10%)
Query: 250 IALMHSPLLGRYNLYNILAGVLGVKLLTQLPLETIVP------LLENFYGVKGRLEIVHS 303
I+ + PL+G Y N+ + K+ + + P L + + RLE +
Sbjct: 249 ISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAASHW--PARLEKISD 306
Query: 304 KPLVVVDFAHTIDGMQQVFESFK---NQKITALFGAGGDRD 341
PL+V+D AH DG+ + + K +Q IT + G D+D
Sbjct: 307 TPLIVIDGAHNPDGINGLITALKQLFSQPITVIAGILADKD 347
>pdb|1JBW|A Chain A, Fpgs-Amppcp-Folate Complex
pdb|1JBV|A Chain A, Fpgs-Amppcp Complex
Length = 428
Score = 35.0 bits (79), Expect = 0.017
Identities = 27/101 (26%), Positives = 46/101 (44%), Gaps = 11/101 (10%)
Query: 250 IALMHSPLLGRYNLYNILAGVLGVKLLTQLPLETIVP------LLENFYGVKGRLEIVHS 303
I+ + PL+G Y N+ + K+ + + P L + + RLE +
Sbjct: 249 ISDLEVPLVGDYQQRNMAIAIQTAKVYAKQTEWPLTPQNIRQGLAASHW--PARLEKISD 306
Query: 304 KPLVVVDFAHTIDGMQQVFESFK---NQKITALFGAGGDRD 341
PL+V+D AH DG+ + + K +Q IT + G D+D
Sbjct: 307 TPLIVIDGAHNPDGINGLITALKQLFSQPITVIAGILADKD 347
>pdb|1GG4|A Chain A, Crystal Structure Of Escherichia Coli Udpmurnac-Tripeptide
D-Alanyl-D-Alanine-Adding Enzyme (Murf) At 2.3 Angstrom
Resolution
pdb|1GG4|B Chain B, Crystal Structure Of Escherichia Coli Udpmurnac-Tripeptide
D-Alanyl-D-Alanine-Adding Enzyme (Murf) At 2.3 Angstrom
Resolution
Length = 452
Score = 32.3 bits (72), Expect = 0.11
Identities = 68/285 (23%), Positives = 107/285 (36%), Gaps = 50/285 (17%)
Query: 32 LFVKTPLNEKYSHLIAEKNLAILDFNELKNYFDFKI--KIVGITGTNGKTTTASLMYSLL 89
L V PL+ LI + L F EL + ++ ++V +TG++GKT+ ++L
Sbjct: 65 LLVSRPLDIDLPQLIVKDTR--LAFGELAAWVRQQVPARVVALTGSSGKTSVKEXTAAIL 122
Query: 90 LDLNKKTALLGTRGFFINNERIKEKGLTTPTLLELYSDLEEAVRLKCEYFIMEVSSHAIV 149
G +NN+ + P L +RL EY + A
Sbjct: 123 SQCGNTLYTAGN----LNND------IGVPXTL---------LRLTPEYDYAVIELGANH 163
Query: 150 QKRIAGLDFALK----ILTNITSDHLDFHQSIENYRDAKNSFFK---DEGLKVINRDETN 202
Q IA + ++ N+ + HL+ S+ AK F + G+ + N D +
Sbjct: 164 QGEIAWTVSLTRPEAALVNNLAAAHLEGFGSLAGVAKAKGEIFSGLPENGIAIXNADNND 223
Query: 203 ALFNPVNAHTYALDKKAHLNVQAFSLNPSIS---------ASLCYQQDLRDPNFKEIALM 253
L N + +K V FS N + S S + L+ P L+
Sbjct: 224 WL----NWQSVIGSRK----VWRFSPNAANSDFTATNIHVTSHGTEFTLQTPTGSVDVLL 275
Query: 254 HSPLLGRYNLYNILAGVLGVKLLTQLPLETIVPLLENFYGVKGRL 298
PL GR+N+ N LA + L+ I L N V GRL
Sbjct: 276 --PLPGRHNIANALAAA-ALSXSVGATLDAIKAGLANLKAVPGRL 317
>pdb|1DLJ|A Chain A, The First Structure Of Udp-Glucose Dehydrogenase (Udpgdh)
Reveals The Catalytic Residues Necessary For The
Two-Fold Oxidation
Length = 402
Score = 30.4 bits (67), Expect = 0.42
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 363 SDNPRSENEEDIIKDILKGINDSSKVIV--------EKDRKKAILNALENLKDDEVLLIL 414
SDN R +D+I DILK + K+I+ E + + ++N LEN K +++
Sbjct: 323 SDNFRESAIKDVI-DILK--SKDIKIIIYEPMLNKLESEDQSVLVNDLENFKKQANIIVT 379
Query: 415 GKGDENIQIFKDK 427
+ D +Q K+K
Sbjct: 380 NRYDNELQDVKNK 392
>pdb|1DLI|A Chain A, The First Structure Of Udp-Glucose Dehydrogenase (Udpgdh)
Reveals The Catalytic Residues Necessary For The
Two-Fold Oxidation
Length = 402
Score = 30.4 bits (67), Expect = 0.42
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 363 SDNPRSENEEDIIKDILKGINDSSKVIV--------EKDRKKAILNALENLKDDEVLLIL 414
SDN R +D+I DILK + K+I+ E + + ++N LEN K +++
Sbjct: 323 SDNFRESAIKDVI-DILK--SKDIKIIIYEPMLNKLESEDQSVLVNDLENFKKQANIIVT 379
Query: 415 GKGDENIQIFKDK 427
+ D +Q K+K
Sbjct: 380 NRYDNELQDVKNK 392
>pdb|1ESM|A Chain A, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESN|A Chain A, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESN|B Chain B, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESN|C Chain C, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESN|D Chain D, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESM|B Chain B, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESM|C Chain C, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
pdb|1ESM|D Chain D, Structural Basis For The Feedback Regulation Of
Escherichia Coli Pantothenate Kinase By Coenzyme A
Length = 316
Score = 30.0 bits (66), Expect = 0.55
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 69 IVGITGTN--GKTTTASLMYSLLLDL--NKKTALLGTRGFFINNERIKEKGL 116
I+ I G+ GK+TTA ++ +LL +++ L+ T GF N+ +KE+GL
Sbjct: 90 IISIAGSVAVGKSTTARVLQALLSRWPEHRRVELITTDGFLHPNQVLKERGL 141
>pdb|1K8K|D Chain D, Crystal Structure Of Arp23 COMPLEX
Length = 300
Score = 28.1 bits (61), Expect = 2.1
Identities = 17/59 (28%), Positives = 31/59 (51%), Gaps = 4/59 (6%)
Query: 391 EKDRKKAILNALENLKDDEVLLILGKGDENIQIFKDKTIFFSDQEVV--KSYYQHLKQG 447
+++ K+ A+ + +DDE + + K D +F T+F D +VV K + Q K+G
Sbjct: 132 QEEGKEGENRAVIHYRDDETMYVESKKDRVTVVF--STVFKDDDDVVIGKVFMQEFKEG 188
>pdb|2YAS|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis Complexed
With Rhodanide
pdb|7YAS|A Chain A, Hydroxynitrile Lyase, Low Temperature Native Structure
pdb|3YAS|A Chain A, Hydroxynitrile Lyase Complexed With Acetone
pdb|1YAS|A Chain A, Hydroxynitrile Lyase Complexed With Histidine
pdb|4YAS|A Chain A, Hydroxynitrile Lyase Complexed With Chloralhydrate
pdb|5YAS|A Chain A, Hydroxynitrile Lyase Complexed With Hexafluoroacetone
pdb|6YAS|A Chain A, Hydroxynitrile Lyase From Hevea Brasiliensis, Room
Temperature Structure
pdb|1QJ4|A Chain A, Hydroxynitrile-Lyase From Hevea Brasiliensis At Atomic
Resolution
Length = 257
Score = 28.1 bits (61), Expect = 2.1
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 6/66 (9%)
Query: 380 KGINDSSKVIVEKDRKKAILNA-----LENLKDDEVLLILGKGDENIQIFKDKTIFFSDQ 434
+G K+ V D+ + L +EN K D+V + G GD +Q+ K K I Q
Sbjct: 192 EGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKPDKVYKVEG-GDHKLQLTKTKEIAEILQ 250
Query: 435 EVVKSY 440
EV +Y
Sbjct: 251 EVADTY 256
>pdb|1GL9|B Chain B, Archaeoglobus Fulgidus Reverse Gyrase Complexed With Adpnp
pdb|1GL9|C Chain C, Archaeoglobus Fulgidus Reverse Gyrase Complexed With Adpnp
Length = 1054
Score = 27.3 bits (59), Expect = 3.6
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 358 KIILTSDNPRSENEEDI--IKDILKGINDSSKVIVEKDRKKAILNALENLKD-DEVLL 412
+ ++ +P +E E+ +K++L G + + ++AIL ALE+L+D DE L+
Sbjct: 624 EFVIVGTDPDTEGEKIAWDLKNLLSGCGAVKRAEFHEVTRRAILEALESLRDVDENLV 681
>pdb|1GKU|B Chain B, Reverse Gyrase From Archaeoglobus Fulgidus
Length = 1054
Score = 27.3 bits (59), Expect = 3.6
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 358 KIILTSDNPRSENEEDI--IKDILKGINDSSKVIVEKDRKKAILNALENLKD-DEVLL 412
+ ++ +P +E E+ +K++L G + + ++AIL ALE+L+D DE L+
Sbjct: 624 EFVIVGTDPDTEGEKIAWDLKNLLSGCGAVKRAEFHEVTRRAILEALESLRDVDENLV 681
>pdb|1GC7|A Chain A, Crystal Structure Of The Radixin Ferm Domain
pdb|1GC6|A Chain A, Crystal Structure Of The Radixin Ferm Domain Complexed
With Inositol-(1,4,5)-Triphosphate
Length = 297
Score = 26.2 bits (56), Expect = 8.0
Identities = 21/61 (34%), Positives = 27/61 (43%), Gaps = 2/61 (3%)
Query: 37 PLNEKYSHLIAEKNLAILDFNELKNYFDFKIKIVGITGT--NGKTTTASLMYSLLLDLNK 94
P+N + + + AE AI K FD +K VG+ G S YS L LNK
Sbjct: 4 PINVRVTTMDAELEFAIQPNTTGKQLFDQVVKTVGLREVWFFGLQYVDSKGYSTWLKLNK 63
Query: 95 K 95
K
Sbjct: 64 K 64
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.318 0.137 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,523,767
Number of Sequences: 13198
Number of extensions: 107998
Number of successful extensions: 256
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 248
Number of HSP's gapped (non-prelim): 17
length of query: 447
length of database: 2,899,336
effective HSP length: 91
effective length of query: 356
effective length of database: 1,698,318
effective search space: 604601208
effective search space used: 604601208
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)