BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646127|ref|NP_208309.1| hypothetical protein
[Helicobacter pylori 26695]
(95 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1AI9|A Chain A, Candida Albicans Dihydrofolate Reductas... 27 0.36
pdb|1G8T|A Chain A, Sm Endonuclease From Seratia Marcenscen... 25 1.4
pdb|1QL0|A Chain A, Sm Endonuclease From Seratia Marcenscen... 25 1.4
pdb|1AIP|C Chain C, Ef-Tu Ef-Ts Complex From Thermus Thermo... 24 3.1
pdb|1IRX|B Chain B, Crystal Structure Of Class I Lysyl-Trna... 24 3.1
pdb|1TFE| Dimerization Domain Of Ef-Ts From T. Thermophilus 24 3.1
pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Huma... 23 4.0
pdb|1B5Q|B Chain B, A 30 Angstrom U-Shaped Catalytic Tunnel... 23 4.0
pdb|1HNU|A Chain A, Crystal Structure Of Peroxisomal Delta3... 23 4.0
pdb|1PSZ|A Chain A, Pneumococcal Surface Antigen Psaa 23 5.2
pdb|1B7G|O Chain O, Glyceraldehyde 3-Phosphate Dehydrogenas... 23 6.9
pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+... 23 6.9
pdb|1GC7|A Chain A, Crystal Structure Of The Radixin Ferm D... 23 6.9
pdb|1KN6|A Chain A, Solution Structure Of The Mouse Prohorm... 23 6.9
pdb|1BBU|A Chain A, Lysyl-Trna Synthetase (Lyss) Complexed ... 22 8.9
pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or A... 22 8.9
pdb|1E24|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal ... 22 8.9
pdb|1CII| Colicin Ia 22 8.9
>pdb|1AI9|A Chain A, Candida Albicans Dihydrofolate Reductase
pdb|1AI9|B Chain B, Candida Albicans Dihydrofolate Reductase
pdb|1AOE|B Chain B, Candida Albicans Dihydrofolate Reductase Complexed With
Dihydro-Nicotinamide-Adenine-Dinucleotide Phosphate
(Nadph) And 1,3-Diamino-7-(1-Ethyepropye)-7h-Pyrralo-
[3,2-F]quinazoline (Gw345)
pdb|1IA3|B Chain B, Candida Albicans Dihydrofolate Reductase Complexed In
Which The Dihydronicotinamide Moiety Of
Dihydro-Nicotinamide- Adenine-Dinucleotide Phosphate
(Nadph) Is Displaced By 5-
[(4-Tert-Butylphenyl)sulfanyl]-2,4-Quinazolinediamine
(Gw995)
pdb|1IA2|B Chain B, Candida Albicans Dihydrofolate Reductase Complexed With
Dihydro-Nicotinamide-Adenine-Dinucleotide Phosphate
(Nadph) And
5-[(4-Methylphenyl)sulfanyl]-2,4-Quinazolinediamine
(Gw578)
pdb|1AOE|A Chain A, Candida Albicans Dihydrofolate Reductase Complexed With
Dihydro-Nicotinamide-Adenine-Dinucleotide Phosphate
(Nadph) And 1,3-Diamino-7-(1-Ethyepropye)-7h-Pyrralo-
[3,2-F]quinazoline (Gw345)
pdb|1IA1|A Chain A, Candida Albicans Dihydrofolate Reductase Complexed With
Dihydro-Nicotinamide-Adenine-Dinucleotide Phosphate
(Nadph) And 5-(Phenylsulfanyl)-2,4-Quinazolinediamine
(Gw997)
pdb|1IA1|B Chain B, Candida Albicans Dihydrofolate Reductase Complexed With
Dihydro-Nicotinamide-Adenine-Dinucleotide Phosphate
(Nadph) And 5-(Phenylsulfanyl)-2,4-Quinazolinediamine
(Gw997)
pdb|1IA3|A Chain A, Candida Albicans Dihydrofolate Reductase Complexed In
Which The Dihydronicotinamide Moiety Of
Dihydro-Nicotinamide- Adenine-Dinucleotide Phosphate
(Nadph) Is Displaced By 5-
[(4-Tert-Butylphenyl)sulfanyl]-2,4-Quinazolinediamine
(Gw995)
pdb|1IA2|A Chain A, Candida Albicans Dihydrofolate Reductase Complexed With
Dihydro-Nicotinamide-Adenine-Dinucleotide Phosphate
(Nadph) And
5-[(4-Methylphenyl)sulfanyl]-2,4-Quinazolinediamine
(Gw578)
pdb|1IA4|A Chain A, Candida Albicans Dihydrofolate Reductase Complexed In
Which The Dihydronicotinamide Moiety Of
Dihydro-Nicotinamide- Adenine-Dinucleotide Phosphate
(Nadph) Is Displaced By 5-
{[4-(4-Morpholinyl)phenyl]sulfanyl}-2,
4-Quinazolinediamin (Gw2021)
pdb|1IA4|B Chain B, Candida Albicans Dihydrofolate Reductase Complexed In
Which The Dihydronicotinamide Moiety Of
Dihydro-Nicotinamide- Adenine-Dinucleotide Phosphate
(Nadph) Is Displaced By 5-
{[4-(4-Morpholinyl)phenyl]sulfanyl}-2,
4-Quinazolinediamin (Gw2021)
Length = 192
Score = 26.9 bits (58), Expect = 0.36
Identities = 13/52 (25%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 44 DDEEFQKNEINKFLGKVSSIEKHYTYKSVALKNAFINNDKLLKHVFLSDVRN 95
DD + I L VS +E+ + + N INN L+ H+ ++++ +
Sbjct: 87 DDNIIHASSIESSLNLVSDVERVFIIGGAEIYNELINN-SLVSHLLITEIEH 137
>pdb|1G8T|A Chain A, Sm Endonuclease From Seratia Marcenscens At 1.1 A
Resolution
pdb|1G8T|B Chain B, Sm Endonuclease From Seratia Marcenscens At 1.1 A
Resolution
pdb|1SMN|A Chain A, Nuclease, Dnase, Rnase, Sugar-Nonspecific Nuclease Mol_id:
1; Molecule: Extracellular Endonuclease; Chain: A, B;
Ec: 3.1.30.2; Engineered: Yes
pdb|1SMN|B Chain B, Nuclease, Dnase, Rnase, Sugar-Nonspecific Nuclease Mol_id:
1; Molecule: Extracellular Endonuclease; Chain: A, B;
Ec: 3.1.30.2; Engineered: Yes
pdb|1QAE|A Chain A, The Active Site Of Serratia Endonuclease Contains A
Conserved Magnesium-Water Cluster
pdb|1QAE|B Chain B, The Active Site Of Serratia Endonuclease Contains A
Conserved Magnesium-Water Cluster
Length = 245
Score = 25.0 bits (53), Expect = 1.4
Identities = 14/38 (36%), Positives = 19/38 (49%), Gaps = 2/38 (5%)
Query: 57 LGKVSSIEKHYTYKSVALKNAFINNDKLLKH--VFLSD 92
+GK+ +K +T S K FINN + H FL D
Sbjct: 154 MGKLPGTQKAHTIPSAYWKVIFINNSPAVNHYAAFLFD 191
>pdb|1QL0|A Chain A, Sm Endonuclease From Seratia Marcenscens At Atomic
Resolution
pdb|1QL0|B Chain B, Sm Endonuclease From Seratia Marcenscens At Atomic
Resolution
Length = 241
Score = 25.0 bits (53), Expect = 1.4
Identities = 14/38 (36%), Positives = 19/38 (49%), Gaps = 2/38 (5%)
Query: 57 LGKVSSIEKHYTYKSVALKNAFINNDKLLKH--VFLSD 92
+GK+ +K +T S K FINN + H FL D
Sbjct: 150 MGKLPGTQKAHTIPSAYWKVIFINNSPAVNHYAAFLFD 187
>pdb|1AIP|C Chain C, Ef-Tu Ef-Ts Complex From Thermus Thermophilus
pdb|1AIP|G Chain G, Ef-Tu Ef-Ts Complex From Thermus Thermophilus
pdb|1AIP|H Chain H, Ef-Tu Ef-Ts Complex From Thermus Thermophilus
pdb|1AIP|D Chain D, Ef-Tu Ef-Ts Complex From Thermus Thermophilus
Length = 196
Score = 23.9 bits (50), Expect = 3.1
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 18/75 (24%)
Query: 17 NPQTPTKETI--ENFEKEIN-----SLLENAPRQDDEEFQKNEINKFLGKVSSIEKHYTY 69
NP+ + E I E EKE +L E P+Q E+ + + K+L +V
Sbjct: 104 NPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEV--------- 154
Query: 70 KSVALKNAFINNDKL 84
V L+ F+ +DK+
Sbjct: 155 --VLLEQPFVKDDKV 167
>pdb|1IRX|B Chain B, Crystal Structure Of Class I Lysyl-Trna Synthetase
pdb|1IRX|A Chain A, Crystal Structure Of Class I Lysyl-Trna Synthetase
Length = 523
Score = 23.9 bits (50), Expect = 3.1
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 3 RFAHISLKDFIKKHNPQTPTKETIENFEKEINSLLENAPRQDDEEFQKNEINKFLGKVS 61
++A +K I + P+ E + E+ LEN EEF E N L +V+
Sbjct: 423 KYAPEDVKFSILEKPPEVEVSEDVREAMNEVAEWLEN-----HEEFSVEEFNNILFEVA 476
>pdb|1TFE| Dimerization Domain Of Ef-Ts From T. Thermophilus
Length = 145
Score = 23.9 bits (50), Expect = 3.1
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 18/75 (24%)
Query: 17 NPQTPTKETI--ENFEKEIN-----SLLENAPRQDDEEFQKNEINKFLGKVSSIEKHYTY 69
NP+ + E I E EKE +L E P+Q E+ + + K+L +V
Sbjct: 50 NPRYVSAEEIPAEELEKERQIYIQAALNEGKPQQIAEKIAEGRLKKYLEEV--------- 100
Query: 70 KSVALKNAFINNDKL 84
V L+ F+ +DK+
Sbjct: 101 --VLLEQPFVKDDKV 113
>pdb|1K96|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|A Chain A, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9K|B Chain B, Crystal Structure Of Calcium Bound Human S100a6
pdb|1K9P|A Chain A, Crystal Structure Of Calcium Free (Or Apo) Human S100a6
Length = 90
Score = 23.5 bits (49), Expect = 4.0
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 30 EKEINSLLENAPRQDDEEFQKNEINKFLGKVSSI 63
+ EI L+E+ R D+E E FLG ++ I
Sbjct: 50 DAEIARLMEDLDRNKDQEVNFQEYVTFLGALALI 83
>pdb|1B5Q|B Chain B, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1B5Q|C Chain C, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1H82|B Chain B, Structure Of Polyamine Oxidase In Complex With Guazatine
pdb|1H82|C Chain C, Structure Of Polyamine Oxidase In Complex With Guazatine
pdb|1H83|B Chain B, Structure Of Polyamine Oxidase In Complex With
1,8-Diaminooctane
pdb|1H83|C Chain C, Structure Of Polyamine Oxidase In Complex With
1,8-Diaminooctane
pdb|1B37|B Chain B, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1B37|C Chain C, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1H84|B Chain B, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 4.6
pdb|1H84|C Chain C, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 4.6
pdb|1H86|B Chain B, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 7.0
pdb|1H86|C Chain C, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 7.0
pdb|1H81|B Chain B, Structure Of Polyamine Oxidase In The Reduced State
pdb|1H81|C Chain C, Structure Of Polyamine Oxidase In The Reduced State
pdb|1B5Q|A Chain A, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1H82|A Chain A, Structure Of Polyamine Oxidase In Complex With Guazatine
pdb|1H83|A Chain A, Structure Of Polyamine Oxidase In Complex With
1,8-Diaminooctane
pdb|1B37|A Chain A, A 30 Angstrom U-Shaped Catalytic Tunnel In The Crystal
Structure Of Polyamine Oxidase
pdb|1H84|A Chain A, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 4.6
pdb|1H86|A Chain A, Covalent Adduct Between Polyamine Oxidase And N1ethyln11
((Cycloheptyl)methyl)4,8diazaundecane At Ph 7.0
pdb|1H81|A Chain A, Structure Of Polyamine Oxidase In The Reduced State
Length = 472
Score = 23.5 bits (49), Expect = 4.0
Identities = 12/54 (22%), Positives = 26/54 (47%), Gaps = 3/54 (5%)
Query: 15 KHNPQTPTKET---IENFEKEINSLLENAPRQDDEEFQKNEINKFLGKVSSIEK 65
K NP P + + NF + + L +N ++D + ++ + K + S+E+
Sbjct: 68 KMNPIWPIVNSTLKLRNFRSDFDYLAQNVYKEDGGVYDEDYVQKRIELADSVEE 121
>pdb|1HNU|A Chain A, Crystal Structure Of Peroxisomal Delta3-Delta2-Enoyl-Coa
Isomerase From Saccharomyces Cerevisiae
pdb|1HNO|A Chain A, Crystal Structure Of Peroxisomal Delta3-Delta2-Enoyl-Coa
Isomerase From Saccharomyces Cerevisiae
Length = 280
Score = 23.5 bits (49), Expect = 4.0
Identities = 10/37 (27%), Positives = 22/37 (59%)
Query: 49 QKNEINKFLGKVSSIEKHYTYKSVALKNAFINNDKLL 85
Q ++ NK+ + S ++ ++V + +AFI + K+L
Sbjct: 79 QGDDTNKYPSETSKWVSNFVARNVYVTDAFIKHSKVL 115
>pdb|1PSZ|A Chain A, Pneumococcal Surface Antigen Psaa
Length = 303
Score = 23.1 bits (48), Expect = 5.2
Identities = 19/74 (25%), Positives = 32/74 (42%), Gaps = 1/74 (1%)
Query: 7 ISLKDFIKKHNPQTPT-KETIENFEKEINSLLENAPRQDDEEFQKNEINKFLGKVSSIEK 65
I K+ K+ + + P KE E KE L+ ++ ++F K K L S
Sbjct: 143 IFAKNIAKQLSAKDPNNKEFYEKNLKEYTDKLDKLDKESKDKFNKIPAEKKLIVTSEGAF 202
Query: 66 HYTYKSVALKNAFI 79
Y K+ + +A+I
Sbjct: 203 KYFSKAYGVPSAYI 216
>pdb|1B7G|O Chain O, Glyceraldehyde 3-Phosphate Dehydrogenase
pdb|1B7G|Q Chain Q, Glyceraldehyde 3-Phosphate Dehydrogenase
Length = 340
Score = 22.7 bits (47), Expect = 6.9
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 15/41 (36%)
Query: 2 IRFAHISLKDFIKKHNPQTPTKETIENFEKEINSLLENAPR 42
+ F +I+LKD ++K K+I S+LEN PR
Sbjct: 220 MHFINITLKDKVEK---------------KDILSVLENTPR 245
>pdb|1A03|A Chain A, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1A03|B Chain B, The Three-Dimensional Structure Of Ca2+-Bound Calcyclin:
Implications For Ca2+-Signal Transduction By S100
Proteins, Nmr, 20 Structures
pdb|1CNP|A Chain A, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1CNP|B Chain B, The Structure Of Calcyclin Reveals A Novel Homodimeric
Fold For S100 Ca2+-Binding Proteins, Nmr, 22 Structures
pdb|1JWD|A Chain A, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|1JWD|B Chain B, Ca2+-Induced Structural Changes In Calcyclin: High-
Resolution Solution Structure Of Ca2+-Bound Calcyclin.
pdb|2CNP|A Chain A, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
pdb|2CNP|B Chain B, High Resolution Solution Structure Of Apo Rabbit
Calcyclin, Nmr, 22 Structures
Length = 90
Score = 22.7 bits (47), Expect = 6.9
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 30 EKEINSLLENAPRQDDEEFQKNEINKFLGKVSSI 63
+ EI L+++ R D+E E FLG ++ I
Sbjct: 50 DAEIVKLMDDLDRNKDQEVNFQEYITFLGALAMI 83
>pdb|1GC7|A Chain A, Crystal Structure Of The Radixin Ferm Domain
pdb|1GC6|A Chain A, Crystal Structure Of The Radixin Ferm Domain Complexed
With Inositol-(1,4,5)-Triphosphate
Length = 297
Score = 22.7 bits (47), Expect = 6.9
Identities = 17/74 (22%), Positives = 30/74 (39%)
Query: 12 FIKKHNPQTPTKETIENFEKEINSLLENAPRQDDEEFQKNEINKFLGKVSSIEKHYTYKS 71
F K P+ ++E I+ + + L +DE + E L + K+ Y
Sbjct: 80 FRAKFFPEDVSEELIQEITQRLFFLQVKEAILNDEIYCPPETAVLLASYAVQAKYGDYNK 139
Query: 72 VALKNAFINNDKLL 85
K ++ ND+LL
Sbjct: 140 EIHKPGYLANDRLL 153
>pdb|1KN6|A Chain A, Solution Structure Of The Mouse Prohormone Convertase 1
Pro- Domain
Length = 90
Score = 22.7 bits (47), Expect = 6.9
Identities = 7/14 (50%), Positives = 11/14 (78%)
Query: 57 LGKVSSIEKHYTYK 70
LG++ S+E HY +K
Sbjct: 38 LGQIGSLENHYLFK 51
>pdb|1BBU|A Chain A, Lysyl-Trna Synthetase (Lyss) Complexed With Lysine
pdb|1BBW|A Chain A, Lysyl-Trna Synthetase (Lyss)
Length = 504
Score = 22.3 bits (46), Expect = 8.9
Identities = 8/27 (29%), Positives = 19/27 (69%), Gaps = 1/27 (3%)
Query: 4 FAHISLKDFIKKHNPQTPTKETIENFE 30
F +++++ IKK+ P+T + ++NF+
Sbjct: 323 FEKLTMREAIKKYRPETDMAD-LDNFD 348
>pdb|1K8U|A Chain A, Crystal Structure Of Calcium-Free (Or Apo) Human S100a6;
Cys3met Mutant (Selenomethionine Derivative)
Length = 90
Score = 22.3 bits (46), Expect = 8.9
Identities = 12/34 (35%), Positives = 17/34 (49%)
Query: 30 EKEINSLLENAPRQDDEEFQKNEINKFLGKVSSI 63
+ EI L E+ R D+E E FLG ++ I
Sbjct: 50 DAEIARLXEDLDRNKDQEVNFQEYVTFLGALALI 83
>pdb|1E24|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
Lysine And Atp And Mn2+
pdb|1E1T|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
T Lysyl_adenylate Intermediate
pdb|1E1O|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal For, Complexed With
L
pdb|1E22|A Chain A, Lysyl-Trna Synthetase (Lysu) Hexagonal Form Complexed With
Lysine And The Non-Hydrolysable Atp Analogue Amp-Pcp
pdb|1LYL|A Chain A, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
Lysine
pdb|1LYL|C Chain C, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
Lysine
pdb|1LYL|B Chain B, Lysyl-Trna Synthetase (Lysu) (E.C.6.1.1.6) Complexed With
Lysine
Length = 504
Score = 22.3 bits (46), Expect = 8.9
Identities = 8/27 (29%), Positives = 19/27 (69%), Gaps = 1/27 (3%)
Query: 4 FAHISLKDFIKKHNPQTPTKETIENFE 30
F +++++ IKK+ P+T + ++NF+
Sbjct: 323 FEKLTMREAIKKYRPETDMAD-LDNFD 348
>pdb|1CII| Colicin Ia
Length = 602
Score = 22.3 bits (46), Expect = 8.9
Identities = 18/61 (29%), Positives = 32/61 (51%), Gaps = 3/61 (4%)
Query: 20 TPTKETIENFEKEINSLLEN-APRQDDEEFQKNEINKFL-GKVSSIEK-HYTYKSVALKN 76
+PT+ IE +KEI + + +Q + E ++ E K L +++ EK T K++ N
Sbjct: 42 SPTRSDIEKRDKEITAYKNTLSAQQKENENKRTEAGKRLSAAIAAREKDENTLKTLRAGN 101
Query: 77 A 77
A
Sbjct: 102 A 102
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.315 0.133 0.363
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 524,035
Number of Sequences: 13198
Number of extensions: 17680
Number of successful extensions: 59
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 48
Number of HSP's gapped (non-prelim): 19
length of query: 95
length of database: 2,899,336
effective HSP length: 71
effective length of query: 24
effective length of database: 1,962,278
effective search space: 47094672
effective search space used: 47094672
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 46 (22.3 bits)