BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646134|ref|NP_208316.1| exodeoxyribonuclease (lexA)
[Helicobacter pylori 26695]
(250 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1BIX| The Crystal Structure Of The Human Dna Repair E... 258 5e-70
pdb|1DE8|A Chain A, Human ApurinicAPYRIMIDINIC ENDONUCLEASE... 258 5e-70
pdb|1E9N|B Chain B, A Second Divalent Metal Ion In The Acti... 258 5e-70
pdb|1DEW|B Chain B, Crystal Structure Of Human Ape1 Bound T... 258 5e-70
pdb|1AKO| Exonuclease Iii From Escherichia Coli 104 1e-23
pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathe... 29 0.59
pdb|1CSB|B Chain B, Papain-Like Lysosomal Dicarboxy-Peptida... 28 0.77
pdb|3PBH| Refined Crystal Structure Of Human Procathepsin... 28 0.77
pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl N... 28 0.77
pdb|1THE|B Chain B, Thiol Protease Mol_id: 1; Molecule: Cat... 28 1.0
pdb|1MIR|A Chain A, Rat Procathepsin B >gi|1942646|pdb|1MIR... 28 1.0
pdb|1CTE|B Chain B, Molecule: Cathepsin B; Ec: 3.4.22.1; Mu... 28 1.0
pdb|1LM7|A Chain A, Structures Of Two Intermediate Filament... 27 1.7
pdb|1I6H|B Chain B, Rna Polymerase Ii Elongation Complex >g... 27 2.2
pdb|1LEN|C Chain C, Lectin (Lentil) (Monoclinic Crystal For... 25 8.5
>pdb|1BIX| The Crystal Structure Of The Human Dna Repair Endonuclease Hap1
Suggests The Recognition Of Extra-Helical Deoxyribose At
Dna Abasic Sites
Length = 287
Score = 258 bits (659), Expect = 5e-70
Identities = 128/255 (50%), Positives = 170/255 (66%), Gaps = 6/255 (2%)
Query: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFKGY----FDFWNC 56
+K+ SWNV+GLRA + K +D+ D+ C+QE+K + + E + +W+
Sbjct: 31 LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSA 90
Query: 57 -AIKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSR 115
+ K+GYSGV +++ PL VSYGI EEHD+EGRVI EF+SF LV Y PN+ + L R
Sbjct: 91 PSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVR 150
Query: 116 LSYRMSWEVEFKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFS 175
L YR W+ F+KFLK L +KP+++CGDLNVAH EIDL NPK N+KNAGF+ +ER+ F
Sbjct: 151 LEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG 210
Query: 176 ELLNA-GFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIY 234
ELL A D+FR+ YPN AYT+W+YM AR KN+GWR+DYFL S+ L L D+ I
Sbjct: 211 ELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR 270
Query: 235 KDILGSDHCPVGLEL 249
LGSDHCP+ L L
Sbjct: 271 SKALGSDHCPITLYL 285
>pdb|1DE8|A Chain A, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To
Abasic Dna
pdb|1DE8|B Chain B, Human ApurinicAPYRIMIDINIC ENDONUCLEASE-1 (Ape1) Bound To
Abasic Dna
pdb|1DE9|A Chain A, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion
pdb|1DE9|B Chain B, Human Ape1 Endonuclease With Bound Abasic Dna And Mn2+ Ion
Length = 276
Score = 258 bits (659), Expect = 5e-70
Identities = 128/255 (50%), Positives = 170/255 (66%), Gaps = 6/255 (2%)
Query: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFKGY----FDFWNC 56
+K+ SWNV+GLRA + K +D+ D+ C+QE+K + + E + +W+
Sbjct: 20 LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSA 79
Query: 57 -AIKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSR 115
+ K+GYSGV +++ PL VSYGI EEHD+EGRVI EF+SF LV Y PN+ + L R
Sbjct: 80 PSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVR 139
Query: 116 LSYRMSWEVEFKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFS 175
L YR W+ F+KFLK L +KP+++CGDLNVAH EIDL NPK N+KNAGF+ +ER+ F
Sbjct: 140 LEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG 199
Query: 176 ELLNA-GFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIY 234
ELL A D+FR+ YPN AYT+W+YM AR KN+GWR+DYFL S+ L L D+ I
Sbjct: 200 ELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR 259
Query: 235 KDILGSDHCPVGLEL 249
LGSDHCP+ L L
Sbjct: 260 SKALGSDHCPITLYL 274
>pdb|1E9N|B Chain B, A Second Divalent Metal Ion In The Active Site Of A New
Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE,
Ape1, And Its Implications For The Catalytic Mechanism
pdb|1E9N|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New
Crystal Form Of Human ApurinicAPYRIMIDINIC ENDONUCLEASE,
Ape1, And Its Implications For The Catalytic Mechanism
pdb|1HD7|A Chain A, A Second Divalent Metal Ion In The Active Site Of A New
Crystal Form Of Human ApurinicAPYRIDINIMIC ENDONUCLEASE,
Ape1, And Its Implications For The Catalytic Mechanism
Length = 318
Score = 258 bits (659), Expect = 5e-70
Identities = 128/255 (50%), Positives = 170/255 (66%), Gaps = 6/255 (2%)
Query: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFKGY----FDFWNC 56
+K+ SWNV+GLRA + K +D+ D+ C+QE+K + + E + +W+
Sbjct: 62 LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSA 121
Query: 57 -AIKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSR 115
+ K+GYSGV +++ PL VSYGI EEHD+EGRVI EF+SF LV Y PN+ + L R
Sbjct: 122 PSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVR 181
Query: 116 LSYRMSWEVEFKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFS 175
L YR W+ F+KFLK L +KP+++CGDLNVAH EIDL NPK N+KNAGF+ +ER+ F
Sbjct: 182 LEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG 241
Query: 176 ELLNA-GFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIY 234
ELL A D+FR+ YPN AYT+W+YM AR KN+GWR+DYFL S+ L L D+ I
Sbjct: 242 ELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR 301
Query: 235 KDILGSDHCPVGLEL 249
LGSDHCP+ L L
Sbjct: 302 SKALGSDHCPITLYL 316
>pdb|1DEW|B Chain B, Crystal Structure Of Human Ape1 Bound To Abasic Dna
pdb|1DEW|A Chain A, Crystal Structure Of Human Ape1 Bound To Abasic Dna
Length = 279
Score = 258 bits (659), Expect = 5e-70
Identities = 128/255 (50%), Positives = 170/255 (66%), Gaps = 6/255 (2%)
Query: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFKGY----FDFWNC 56
+K+ SWNV+GLRA + K +D+ D+ C+QE+K + + E + +W+
Sbjct: 23 LKICSWNVDGLRAWIKKKGLDWVKEEAPDILCLQETKCSENKLPAELQELPGLSHQYWSA 82
Query: 57 -AIKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVITCEFESFYLVNVYTPNSQQALSR 115
+ K+GYSGV +++ PL VSYGI EEHD+EGRVI EF+SF LV Y PN+ + L R
Sbjct: 83 PSDKEGYSGVGLLSRQCPLKVSYGIGDEEHDQEGRVIVAEFDSFVLVTAYVPNAGRGLVR 142
Query: 116 LSYRMSWEVEFKKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFS 175
L YR W+ F+KFLK L +KP+++CGDLNVAH EIDL NPK N+KNAGF+ +ER+ F
Sbjct: 143 LEYRQRWDEAFRKFLKGLASRKPLVLCGDLNVAHEEIDLRNPKGNKKNAGFTPQERQGFG 202
Query: 176 ELLNA-GFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNPLKTRLKDALIY 234
ELL A D+FR+ YPN AYT+W+YM AR KN+GWR+DYFL S+ L L D+ I
Sbjct: 203 ELLQAVPLADSFRHLYPNTPYAYTFWTYMMNARSKNVGWRLDYFLLSHSLLPALCDSKIR 262
Query: 235 KDILGSDHCPVGLEL 249
LGSDHCP+ L L
Sbjct: 263 SKALGSDHCPITLYL 277
>pdb|1AKO| Exonuclease Iii From Escherichia Coli
Length = 268
Score = 104 bits (259), Expect = 1e-23
Identities = 78/266 (29%), Positives = 127/266 (47%), Gaps = 25/266 (9%)
Query: 1 MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFK---GYFDFWNCA 57
MK +S+N+NGLRA DV +QE+K+ + E GY F++
Sbjct: 1 MKFVSFNINGLRA-RPHQLEAIVEKHQPDVIGLQETKVHDDMFPLEEVAKLGYNVFYHG- 58
Query: 58 IKKGYSGVVTFTKKEPLSVSYGINMEEHDKEGRVITCEFESFY----LVNVYTPNSQQAL 113
+KG+ GV TK+ P++V G ++ + + R+I E S ++N Y P +
Sbjct: 59 -QKGHYGVALLTKETPIAVRRGFPGDDEEAQRRIIMAEIPSLLGNVTVINGYFPQGESRD 117
Query: 114 SRLSY--RMSWEVEFKKFLKALELKK--PVIVCGDLNVAHNEIDLENPKTNRKN------ 163
+ + + + + +L+ ELK+ PV++ GD+N++ ++D+ + NRK
Sbjct: 118 HPIKFPAKAQFYQNLQNYLET-ELKRDNPVLIMGDMNISPTDLDIGIGEENRKRWLRTGK 176
Query: 164 AGFSDEEREKFSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQARDKNIGWRIDYFLCSNP 223
F EERE L++ G +DTFR+ P ++W+ Y + D N G RID L S P
Sbjct: 177 CSFLPEEREWMDRLMSWGLVDTFRHANPQTADRFSWFDYRSKGFDDNRGLRIDLLLASQP 236
Query: 224 LKTRLKDALIYKDILG----SDHCPV 245
L + I +I SDH PV
Sbjct: 237 LAECCVETGIDYEIRSMEKPSDHAPV 262
>pdb|1QDQ|A Chain A, X-Ray Crystal Structure Of Bovine Cathepsin B-Ca074
Complex
Length = 253
Score = 28.9 bits (63), Expect = 0.59
Identities = 14/44 (31%), Positives = 23/44 (51%), Gaps = 4/44 (9%)
Query: 211 IGWRID----YFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV 250
+GW ++ Y+L +N T D +K + G DHC + E+V
Sbjct: 204 LGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEIV 247
>pdb|1CSB|B Chain B, Papain-Like Lysosomal Dicarboxy-Peptidase Mol_id: 1;
Molecule: Cathepsin B; Chain: A, B, C, D, E, F; Ec:
3.4.22.1
pdb|1CSB|E Chain E, Papain-Like Lysosomal Dicarboxy-Peptidase Mol_id: 1;
Molecule: Cathepsin B; Chain: A, B, C, D, E, F; Ec:
3.4.22.1
pdb|1HUC|B Chain B, Cathepsin B (E.C.3.4.22.1)
pdb|1HUC|D Chain D, Cathepsin B (E.C.3.4.22.1)
Length = 205
Score = 28.5 bits (62), Expect = 0.77
Identities = 14/44 (31%), Positives = 23/44 (51%), Gaps = 4/44 (9%)
Query: 211 IGWRID----YFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV 250
+GW ++ Y+L +N T D +K + G DHC + E+V
Sbjct: 155 LGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVV 198
>pdb|3PBH| Refined Crystal Structure Of Human Procathepsin B At 2.5 Angstrom
Resolution
pdb|1PBH| Crystal Structure Of Human Recombinant Procathepsin B At 3.2
Angstrom Resolution
pdb|2PBH| Crystal Structure Of Human Procathepsin B At 3.3 Angstrom
Resolution
Length = 317
Score = 28.5 bits (62), Expect = 0.77
Identities = 14/44 (31%), Positives = 23/44 (51%), Gaps = 4/44 (9%)
Query: 211 IGWRID----YFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV 250
+GW ++ Y+L +N T D +K + G DHC + E+V
Sbjct: 267 LGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVV 310
>pdb|1GMY|A Chain A, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor
pdb|1GMY|B Chain B, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor
pdb|1GMY|C Chain C, Cathepsin B Complexed With Dipeptidyl Nitrile Inhibitor
Length = 261
Score = 28.5 bits (62), Expect = 0.77
Identities = 14/44 (31%), Positives = 23/44 (51%), Gaps = 4/44 (9%)
Query: 211 IGWRID----YFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV 250
+GW ++ Y+L +N T D +K + G DHC + E+V
Sbjct: 205 LGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVV 248
>pdb|1THE|B Chain B, Thiol Protease Mol_id: 1; Molecule: Cathepsin B; Chain: A,
B, C, D; Ec: 3.4.22.1; Engineered: Yes; Mutation: S115a;
Heterogen: Z-Arg-Ser(O-Bzl) Chloromethylketone
Inhibitor; Other_details: Recombinant Rat Enzyme
pdb|1CPJ|A Chain A, Thiol Protease Mol_id: 1; Molecule: Cathepsin B; Chain: A,
B; Ec: 3.4.22.1; Engineered: Yes; Mutation: S115a
pdb|1CPJ|B Chain B, Thiol Protease Mol_id: 1; Molecule: Cathepsin B; Chain: A,
B; Ec: 3.4.22.1; Engineered: Yes; Mutation: S115a
pdb|1THE|A Chain A, Thiol Protease Mol_id: 1; Molecule: Cathepsin B; Chain: A,
B, C, D; Ec: 3.4.22.1; Engineered: Yes; Mutation: S115a;
Heterogen: Z-Arg-Ser(O-Bzl) Chloromethylketone
Inhibitor; Other_details: Recombinant Rat Enzyme
Length = 260
Score = 28.1 bits (61), Expect = 1.0
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 167 SDEEREKFSELLNAGFID-TFRYFYPNKEKAYTWWSYMQQARD-------KNIGWRID-- 216
SD E+E +E+ G ++ F F + Y Y +A D + +GW I+
Sbjct: 160 SDSEKEIMAEIYKNGPVEGAFTVF--SDFLTYKSGVYKHEAGDVMGGHAIRILGWGIENG 217
Query: 217 --YFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV 250
Y+L +N D +K + G +HC + E+V
Sbjct: 218 VPYWLVANSWNADWGDNGFFKILRGENHCGIESEIV 253
>pdb|1MIR|A Chain A, Rat Procathepsin B
pdb|1MIR|B Chain B, Rat Procathepsin B
Length = 322
Score = 28.1 bits (61), Expect = 1.0
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 167 SDEEREKFSELLNAGFID-TFRYFYPNKEKAYTWWSYMQQARD-------KNIGWRID-- 216
SD E+E +E+ G ++ F F + Y Y +A D + +GW I+
Sbjct: 216 SDSEKEIMAEIYKNGPVEGAFTVF--SDFLTYKSGVYKHEAGDVMGGHAIRILGWGIENG 273
Query: 217 --YFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV 250
Y+L +N D +K + G +HC + E+V
Sbjct: 274 VPYWLVANSWNADWGDNGFFKILRGENHCGIESEIV 309
>pdb|1CTE|B Chain B, Molecule: Cathepsin B; Ec: 3.4.22.1; Mutation: Ser115ala;
Engineered; Heterogen: Pyridyl Sulfide Blocking Group At
Active-Site Cys 29
pdb|1CTE|A Chain A, Molecule: Cathepsin B; Ec: 3.4.22.1; Mutation: Ser115ala;
Engineered; Heterogen: Pyridyl Sulfide Blocking Group At
Active-Site Cys 29
Length = 254
Score = 28.1 bits (61), Expect = 1.0
Identities = 25/96 (26%), Positives = 42/96 (43%), Gaps = 14/96 (14%)
Query: 167 SDEEREKFSELLNAGFID-TFRYFYPNKEKAYTWWSYMQQARD-------KNIGWRID-- 216
SD E+E +E+ G ++ F F + Y Y +A D + +GW I+
Sbjct: 154 SDSEKEIMAEIYKNGPVEGAFTVF--SDFLTYKSGVYKHEAGDVMGGHAIRILGWGIENG 211
Query: 217 --YFLCSNPLKTRLKDALIYKDILGSDHCPVGLELV 250
Y+L +N D +K + G +HC + E+V
Sbjct: 212 VPYWLVANSWNADWGDNGFFKILRGENHCGIESEIV 247
>pdb|1LM7|A Chain A, Structures Of Two Intermediate Filament-Binding Fragments
Of Desmoplakin Reveal A Unique Repeat Motif Structure
pdb|1LM7|B Chain B, Structures Of Two Intermediate Filament-Binding Fragments
Of Desmoplakin Reveal A Unique Repeat Motif Structure
Length = 248
Score = 27.3 bits (59), Expect = 1.7
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 7/59 (11%)
Query: 172 EKFSELLNAGFIDTFRYFYPNKEKAYTWWSYMQQA-RDKNIGWRIDYFLCSNPLKTRLK 229
E+ SE+L+ DT +F PN E+ T+ ++ +D+ G LC PLK + K
Sbjct: 191 EELSEILSDPSDDTKGFFDPNTEENLTYLQLKERCIKDEETG------LCLLPLKEKKK 243
>pdb|1I6H|B Chain B, Rna Polymerase Ii Elongation Complex
pdb|1I50|B Chain B, Rna Polymerase Ii Crystal Form Ii At 2.8 A Resolution
pdb|1I3Q|B Chain B, Rna Polymerase Ii Crystal Form I At 3.1 A Resolution
pdb|1K83|B Chain B, Crystal Structure Of Yeast Rna Polymerase Ii Complexed
With The Inhibitor Alpha Amanitin
Length = 1224
Score = 26.9 bits (58), Expect = 2.2
Identities = 21/71 (29%), Positives = 32/71 (44%), Gaps = 9/71 (12%)
Query: 123 EVEFKKFLKALELKKPV-IVCGDLNVAHNEIDLENPKTNRKNA--------GFSDEEREK 173
E E K F A + +P+ IV D ++ H E+ + + A GF D E
Sbjct: 621 EKELKIFTDAGRVYRPLFIVEDDESLGHKELKVRKGHIAKLMATEYQDIEGGFEDVEEYT 680
Query: 174 FSELLNAGFID 184
+S LLN G ++
Sbjct: 681 WSSLLNEGLVE 691
>pdb|1LEN|C Chain C, Lectin (Lentil) (Monoclinic Crystal Form)
pdb|2LAL|A Chain A, Lentil Lectin
pdb|2LAL|C Chain C, Lentil Lectin
pdb|1LES|A Chain A, Lentil Lectin Complexed With Sucrose
pdb|1LES|C Chain C, Lentil Lectin Complexed With Sucrose
pdb|1LEM|A Chain A, Lectin (Lentil) (Hexagonal Crystal Form)
pdb|1LEN|A Chain A, Lectin (Lentil) (Monoclinic Crystal Form)
Length = 181
Score = 25.0 bits (53), Expect = 8.5
Identities = 8/20 (40%), Positives = 14/20 (70%)
Query: 81 NMEEHDKEGRVITCEFESFY 100
N +E+DK + + EF++FY
Sbjct: 105 NSKEYDKTSQTVAVEFDTFY 124
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.321 0.137 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,560,554
Number of Sequences: 13198
Number of extensions: 65918
Number of successful extensions: 177
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 156
Number of HSP's gapped (non-prelim): 15
length of query: 250
length of database: 2,899,336
effective HSP length: 86
effective length of query: 164
effective length of database: 1,764,308
effective search space: 289346512
effective search space used: 289346512
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)