BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644863|ref|NP_207033.1| conserved hypothetical
secreted protein [Helicobacter pylori 26695]
(355 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1KLX|A Chain A, Helicobacter Pylori Cysteine Rich Prote... 92 1e-19
pdb|1MD3|A Chain A, A Folding Mutant Of Human Class Pi Glut... 27 4.6
pdb|1EOH|A Chain A, Glutathione Transferase P1-1 >gi|115144... 27 4.6
pdb|1AQW|A Chain A, Glutathione S-Transferase In Complex Wi... 27 4.6
pdb|1AQV|A Chain A, Glutathione S-Transferase In Complex Wi... 27 4.6
pdb|1EOG|A Chain A, Crystal Structure Of Pi Class Glutathio... 27 4.6
pdb|1LBK|A Chain A, Crystal Structure Of A Recombinant Glut... 27 4.6
pdb|22GS|A Chain A, Human Glutathione S-Transferase P1-1 Y4... 27 4.6
pdb|17GS|A Chain A, Glutathione S-Transferase P1-1 >gi|4139... 27 4.6
pdb|1MD4|A Chain A, A Folding Mutant Of Human Class Pi Glut... 27 4.6
pdb|13GS|A Chain A, Glutathione S-Transferase Complexed Wit... 27 4.6
pdb|1K8K|D Chain D, Crystal Structure Of Arp23 COMPLEX 26 6.0
pdb|1C5D|A Chain A, The Crystal Structure Of The Fab Fragme... 26 6.0
pdb|1PGT|A Chain A, Crystal Structure Of Human Glutathione ... 26 6.0
pdb|1HPU|A Chain A, 5'-Nucleotidase (Closed Form), Complex ... 26 7.9
pdb|2USH|B Chain B, 5'-Nucleotidase From E. Coli >gi|554250... 26 7.9
>pdb|1KLX|A Chain A, Helicobacter Pylori Cysteine Rich Protein B (Hcpb)
Length = 138
Score = 91.7 bits (226), Expect = 1e-19
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGG 241
VK+ KA+ YY+KAC L++ C +L S + L F YL KAC LN+ G
Sbjct: 7 VKKDLKKAIQYYVKACELNEMFGCLSLVSNSQINKQKL-------FQYLSKACELNSGNG 59
Query: 242 CASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDN 301
C LG Y G+YVKKD +KA ++ +AC + C +G+ G V K+ ++A+
Sbjct: 60 CRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKT 119
Query: 302 YERGCDMGDEVGC 314
+E+ C +G E C
Sbjct: 120 FEKACRLGSEDAC 132
Score = 87.8 bits (216), Expect = 2e-18
Identities = 46/136 (33%), Positives = 68/136 (49%), Gaps = 10/136 (7%)
Query: 215 GDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGS 274
G + +D + A Y KAC LN GC SL S + + QK F + +AC++ S
Sbjct: 3 GGGTVKKDLKKAIQYYVKACELNEMFGCLSLVSNSQINK------QKLFQYLSKACELNS 56
Query: 275 AVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENA 330
C +G Y G V KDLRKA Y + C + D+ GC L Y +K+++ A
Sbjct: 57 GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQA 116
Query: 331 IMIYDKGCKLGMKQAC 346
+ ++K C+LG + AC
Sbjct: 117 VKTFEKACRLGSEDAC 132
Score = 73.2 bits (178), Expect = 4e-14
Identities = 35/93 (37%), Positives = 49/93 (52%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
N K Y KAC GC LG YENG+ + D +KA +YY AC +D++GC L
Sbjct: 40 NKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLIL 99
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESC 134
G G G +N ++A+ + KAC L ++C
Sbjct: 100 GYKQYAGKGVVKNEKQAVKTFEKACRLGSEDAC 132
Score = 68.9 bits (167), Expect = 8e-13
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 72 GQGT-RIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKH 130
G GT + D KKA++YY AC+ ++ GC L + N Q+ +KAC L
Sbjct: 3 GGGTVKKDLKKAIQYYVKACELNEMFGCLSLVS------NSQINKQKLFQYLSKACELNS 56
Query: 131 PESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHK 188
C LG Y+ + +K + +A YY K+C + GC +LG G VK + +
Sbjct: 57 GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVK-NEKQ 115
Query: 189 AVIYYLKACRLDDGQACRALGS 210
AV + KACRL AC L +
Sbjct: 116 AVKTFEKACRLGSEDACGILNN 137
Score = 62.0 bits (149), Expect = 1e-10
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
KA Y+ KAC GC L ++I+ +K +Y AC+ + GC LG
Sbjct: 13 KAIQYYVKACELNEMFGCLSLV------SNSQINKQKLFQYLSKACELNSGNGCRFLGDF 66
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGI--IYDRKIKGNADQAVTYYQKSCNF 162
Y+ G ++ ++A Y+KAC L + C LG + + N QAV ++K+C
Sbjct: 67 YENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126
Query: 163 DMAKGCYVL 171
C +L
Sbjct: 127 GSEDACGIL 135
Score = 39.7 bits (91), Expect = 5e-04
Identities = 20/66 (30%), Positives = 33/66 (49%), Gaps = 5/66 (7%)
Query: 38 YKSGNY-----SKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQA 92
Y++G Y KA Y+ KAC +GC LG G+G + K+A++ ++ AC+
Sbjct: 67 YENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126
Query: 93 DDREGC 98
+ C
Sbjct: 127 GSEDAC 132
>pdb|1MD3|A Chain A, A Folding Mutant Of Human Class Pi Glutathione
Transferase, Created By Mutating Glycine 146 Of The
Wild-Type Protein To Alanine
pdb|1MD3|B Chain B, A Folding Mutant Of Human Class Pi Glutathione
Transferase, Created By Mutating Glycine 146 Of The
Wild-Type Protein To Alanine
Length = 209
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 93 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 122
>pdb|1EOH|A Chain A, Glutathione Transferase P1-1
pdb|1EOH|B Chain B, Glutathione Transferase P1-1
pdb|1EOH|C Chain C, Glutathione Transferase P1-1
pdb|1EOH|D Chain D, Glutathione Transferase P1-1
pdb|1EOH|E Chain E, Glutathione Transferase P1-1
pdb|1EOH|F Chain F, Glutathione Transferase P1-1
pdb|1EOH|G Chain G, Glutathione Transferase P1-1
pdb|1EOH|H Chain H, Glutathione Transferase P1-1
Length = 209
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 93 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 122
>pdb|1AQW|A Chain A, Glutathione S-Transferase In Complex With Glutathione
pdb|1AQW|B Chain B, Glutathione S-Transferase In Complex With Glutathione
pdb|1AQW|C Chain C, Glutathione S-Transferase In Complex With Glutathione
pdb|1AQW|D Chain D, Glutathione S-Transferase In Complex With Glutathione
pdb|8GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|8GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|8GSS|C Chain C, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|7GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|7GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|1GSS|A Chain A, Glutathione S-Transferase (E.C.2.5.1.18) (Class Pi)
pdb|1GSS|B Chain B, Glutathione S-Transferase (E.C.2.5.1.18) (Class Pi)
pdb|3GSS|A Chain A, Human Glutathione S-Transferase P1-1 In Complex With
Ethacrynic Acid-Glutathione Conjugate
pdb|3GSS|B Chain B, Human Glutathione S-Transferase P1-1 In Complex With
Ethacrynic Acid-Glutathione Conjugate
pdb|19GS|A Chain A, Glutathione S-Transferase P1-1
pdb|19GS|B Chain B, Glutathione S-Transferase P1-1
pdb|2GSS|A Chain A, Human Glutathione S-Transferase P1-1 In Complex With
Ethacrynic Acid
pdb|2GSS|B Chain B, Human Glutathione S-Transferase P1-1 In Complex With
Ethacrynic Acid
pdb|9GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With S-Hexyl
Glutathione
pdb|9GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With S-Hexyl
Glutathione
pdb|6GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|6GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|5GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|5GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|1AQX|A Chain A, Glutathione S-Transferase In Complex With Meisenheimer
Complex
pdb|1AQX|B Chain B, Glutathione S-Transferase In Complex With Meisenheimer
Complex
pdb|1AQX|C Chain C, Glutathione S-Transferase In Complex With Meisenheimer
Complex
pdb|1AQX|D Chain D, Glutathione S-Transferase In Complex With Meisenheimer
Complex
pdb|10GS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With Ter117
pdb|10GS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With Ter117
pdb|20GS|A Chain A, Glutathione S-Transferase P1-1 Complexed With Cibacron
Blue
pdb|20GS|B Chain B, Glutathione S-Transferase P1-1 Complexed With Cibacron
Blue
Length = 209
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 93 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 122
>pdb|1AQV|A Chain A, Glutathione S-Transferase In Complex With
P-Bromobenzylglutathione
pdb|1AQV|B Chain B, Glutathione S-Transferase In Complex With
P-Bromobenzylglutathione
Length = 209
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 93 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 122
>pdb|1EOG|A Chain A, Crystal Structure Of Pi Class Glutathione Transferase
pdb|1EOG|B Chain B, Crystal Structure Of Pi Class Glutathione Transferase
Length = 208
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 92 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 121
>pdb|1LBK|A Chain A, Crystal Structure Of A Recombinant Glutathione
Transferase, Created By Replacing The Last Seven
Residues Of Each Subunit Of The Human Class Pi Isoenzyme
With The Additional C-Terminal Helix Of Human Class
Alpha Isoenzyme
pdb|1LBK|B Chain B, Crystal Structure Of A Recombinant Glutathione
Transferase, Created By Replacing The Last Seven
Residues Of Each Subunit Of The Human Class Pi Isoenzyme
With The Additional C-Terminal Helix Of Human Class
Alpha Isoenzyme
Length = 208
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 93 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 122
>pdb|22GS|A Chain A, Human Glutathione S-Transferase P1-1 Y49f Mutant
pdb|22GS|B Chain B, Human Glutathione S-Transferase P1-1 Y49f Mutant
Length = 210
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 94 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 123
>pdb|17GS|A Chain A, Glutathione S-Transferase P1-1
pdb|17GS|B Chain B, Glutathione S-Transferase P1-1
Length = 210
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 94 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 123
>pdb|1MD4|A Chain A, A Folding Mutant Of Human Class Pi Glutathione
Transferase, Created By Mutating Glycine 146 Of The
Wild-Type Protein To Valine
pdb|1MD4|B Chain B, A Folding Mutant Of Human Class Pi Glutathione
Transferase, Created By Mutating Glycine 146 Of The
Wild-Type Protein To Valine
Length = 209
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 93 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 122
>pdb|13GS|A Chain A, Glutathione S-Transferase Complexed With Sulfasalazine
pdb|3PGT|A Chain A, Crystal Structure Of Hgstp1-1[i104] Complexed With The Gsh
Conjugate Of (+)-Anti-Bpde
pdb|3PGT|B Chain B, Crystal Structure Of Hgstp1-1[i104] Complexed With The Gsh
Conjugate Of (+)-Anti-Bpde
pdb|13GS|B Chain B, Glutathione S-Transferase Complexed With Sulfasalazine
pdb|18GS|A Chain A, Glutathione S-Transferase P1-1 Complexed With
1-(S-Glutathionyl)-2,4-Dinitrobenzene
pdb|18GS|B Chain B, Glutathione S-Transferase P1-1 Complexed With
1-(S-Glutathionyl)-2,4-Dinitrobenzene
pdb|21GS|A Chain A, Human Glutathione S-Transferase P1-1 In Complex With
Chlorambucil
pdb|21GS|B Chain B, Human Glutathione S-Transferase P1-1 In Complex With
Chlorambucil
pdb|16GS|A Chain A, Glutathione S-Transferase P1-1 Apo Form 3
pdb|16GS|B Chain B, Glutathione S-Transferase P1-1 Apo Form 3
pdb|12GS|A Chain A, Glutathione S-Transferase Complexed With
S-Nonyl-Glutathione
pdb|12GS|B Chain B, Glutathione S-Transferase Complexed With
S-Nonyl-Glutathione
pdb|11GS|A Chain A, Glutathione S-Transferase Complexed With Ethacrynic
Acid-Glutathione Conjugate (Form Ii)
pdb|11GS|B Chain B, Glutathione S-Transferase Complexed With Ethacrynic
Acid-Glutathione Conjugate (Form Ii)
pdb|14GS|A Chain A, Glutathione S-Transferase P1-1 Apo Form 1
pdb|14GS|B Chain B, Glutathione S-Transferase P1-1 Apo Form 1
Length = 210
Score = 26.6 bits (57), Expect = 4.6
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 94 NDGVEDLRCKYISLIYTNYEAGKDDYVKAL 123
>pdb|1K8K|D Chain D, Crystal Structure Of Arp23 COMPLEX
Length = 300
Score = 26.2 bits (56), Expect = 6.0
Identities = 18/69 (26%), Positives = 35/69 (50%), Gaps = 9/69 (13%)
Query: 128 LKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFL---EVKQ 184
L +PES YN+ ++YD + + ++ + + + C+ +EK F E K+
Sbjct: 84 LVNPESGYNVSLLYDLENLPASKDSIVHQAGM----LKRNCF--ASVFEKYFQFQEEGKE 137
Query: 185 SNHKAVIYY 193
++AVI+Y
Sbjct: 138 GENRAVIHY 146
>pdb|1C5D|A Chain A, The Crystal Structure Of The Fab Fragment Of A Rat
Monoclonal Antibody Against The Main Immunogenic Region
Of The Human Muscle Acetylcholine Receptor
pdb|1C5D|L Chain L, The Crystal Structure Of The Fab Fragment Of A Rat
Monoclonal Antibody Against The Main Immunogenic Region
Of The Human Muscle Acetylcholine Receptor
Length = 213
Score = 26.2 bits (56), Expect = 6.0
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 53 ACNDGVSEGCTQLGIIYENGQGTRIDYKKA 82
A D S C Q G +Y G GT+++ K+A
Sbjct: 79 ASEDIASYYCLQYGNLYTFGAGTKLEIKRA 108
>pdb|1PGT|A Chain A, Crystal Structure Of Human Glutathione S-Transferase
P1-1[v104] Complexed With S-Hexylglutathione
pdb|2PGT|A Chain A, Crystal Structure Of Human Glutathione S-Transferase
P1-1[v104] Complexed With
(9r,10r)-9-(S-Glutathionyl)-10-
Hydroxy-9,10-Dihydrophenanthrene
pdb|1PGT|B Chain B, Crystal Structure Of Human Glutathione S-Transferase
P1-1[v104] Complexed With S-Hexylglutathione
pdb|2PGT|B Chain B, Crystal Structure Of Human Glutathione S-Transferase
P1-1[v104] Complexed With
(9r,10r)-9-(S-Glutathionyl)-10-
Hydroxy-9,10-Dihydrophenanthrene
Length = 210
Score = 26.2 bits (56), Expect = 6.0
Identities = 13/30 (43%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 55 NDGVSE-GCTQLGIIYENGQGTRIDYKKAL 83
NDGV + C + +IY N + + DY KAL
Sbjct: 94 NDGVEDLRCKYVSLIYTNYEAGKDDYVKAL 123
>pdb|1HPU|A Chain A, 5'-Nucleotidase (Closed Form), Complex With Ampcp
pdb|1HPU|B Chain B, 5'-Nucleotidase (Closed Form), Complex With Ampcp
pdb|1HPU|C Chain C, 5'-Nucleotidase (Closed Form), Complex With Ampcp
pdb|1HPU|D Chain D, 5'-Nucleotidase (Closed Form), Complex With Ampcp
pdb|1HO5|A Chain A, 5'-Nucleotidase (E. Coli) In Complex With Adenosine And
Phosphate
pdb|1HO5|B Chain B, 5'-Nucleotidase (E. Coli) In Complex With Adenosine And
Phosphate
Length = 525
Score = 25.8 bits (55), Expect = 7.9
Identities = 21/65 (32%), Positives = 28/65 (42%), Gaps = 11/65 (16%)
Query: 16 WSLNAHLWGKQDNSFLGVAEKAYKSG-----NYSKATSYFKK--ACNDGVSEGCTQLGII 68
W + AH WGK ++G A+ +++G NY KK DG SE I
Sbjct: 259 WIVQAHEWGK----YVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEI 314
Query: 69 YENGQ 73
EN Q
Sbjct: 315 AENQQ 319
>pdb|2USH|B Chain B, 5'-Nucleotidase From E. Coli
pdb|1USH| 5'-Nucleotidase From E. Coli
pdb|2USH|A Chain A, 5'-Nucleotidase From E. Coli
Length = 550
Score = 25.8 bits (55), Expect = 7.9
Identities = 21/65 (32%), Positives = 28/65 (42%), Gaps = 11/65 (16%)
Query: 16 WSLNAHLWGKQDNSFLGVAEKAYKSG-----NYSKATSYFKK--ACNDGVSEGCTQLGII 68
W + AH WGK ++G A+ +++G NY KK DG SE I
Sbjct: 284 WIVQAHEWGK----YVGRADFEFRNGEMKMVNYQLIPVNLKKKVTWEDGKSERVLYTPEI 339
Query: 69 YENGQ 73
EN Q
Sbjct: 340 AENQQ 344
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.321 0.139 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,281,798
Number of Sequences: 13198
Number of extensions: 103897
Number of successful extensions: 225
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 201
Number of HSP's gapped (non-prelim): 21
length of query: 355
length of database: 2,899,336
effective HSP length: 89
effective length of query: 266
effective length of database: 1,724,714
effective search space: 458773924
effective search space used: 458773924
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)