BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644672|ref|NP_206842.1| hypothetical protein
[Helicobacter pylori 26695]
(123 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1YRG|A Chain A, The Crystal Structure Of Rna1p: A New F... 27 0.51
pdb|1K5D|C Chain C, Crystal Structure Of Ran-Gppnhp-Ranbp1-... 27 0.51
pdb|1RRO| Rat Oncomodulin >gi|230200|pdb|1OMD| Oncomodulin 26 1.1
pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol D... 24 5.7
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Co... 24 5.7
pdb|1GAD|O Chain O, Mol_id: 1; Molecule: D-Glyceraldehyde-3... 24 5.7
pdb|1GAE|O Chain O, Mol_id: 1; Molecule: D-Glyceraldehyde-3... 24 5.7
pdb|1MD3|A Chain A, A Folding Mutant Of Human Class Pi Glut... 23 7.4
pdb|1EOH|A Chain A, Glutathione Transferase P1-1 >gi|115144... 23 7.4
pdb|4GSS|A Chain A, Human Glutathione S-Transferase P1-1 Y1... 23 7.4
pdb|1AQW|A Chain A, Glutathione S-Transferase In Complex Wi... 23 7.4
pdb|1AQV|A Chain A, Glutathione S-Transferase In Complex Wi... 23 7.4
pdb|1EOG|A Chain A, Crystal Structure Of Pi Class Glutathio... 23 7.4
pdb|1LBK|A Chain A, Crystal Structure Of A Recombinant Glut... 23 7.4
pdb|1PGT|A Chain A, Crystal Structure Of Human Glutathione ... 23 7.4
pdb|22GS|A Chain A, Human Glutathione S-Transferase P1-1 Y4... 23 7.4
pdb|1TOL|A Chain A, Fusion Of N-Terminal Domain Of The Mino... 23 7.4
pdb|17GS|A Chain A, Glutathione S-Transferase P1-1 >gi|4139... 23 7.4
pdb|1MD4|A Chain A, A Folding Mutant Of Human Class Pi Glut... 23 7.4
pdb|13GS|A Chain A, Glutathione S-Transferase Complexed Wit... 23 7.4
pdb|4PGT|A Chain A, Crystal Structure Of Hgstp1-1[v104] Com... 23 7.4
pdb|1AL3| Cofactor Binding Fragment Of Cysb From Klebsiel... 23 7.4
pdb|1KZQ|A Chain A, Crystal Structure Of A Parasite Protein... 23 9.6
pdb|1IAT|A Chain A, Crystal Structure Of Human Phosphogluco... 23 9.6
pdb|1IRI|A Chain A, Crystal Structure Of Human Autocrine Mo... 23 9.6
>pdb|1YRG|A Chain A, The Crystal Structure Of Rna1p: A New Fold For A Gtpase-
Activating Protein
pdb|1YRG|B Chain B, The Crystal Structure Of Rna1p: A New Fold For A Gtpase-
Activating Protein
Length = 385
Score = 27.3 bits (59), Expect = 0.51
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 67 KDATIKALQEQLKAALKALNSKEMNHSKEE---TFKNPPIDLKQTQTPLKKTFLQSNGI 122
KD +AL+ L+A LK + S T + P ID TPL+ +L +NG+
Sbjct: 75 KDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 133
>pdb|1K5D|C Chain C, Crystal Structure Of Ran-Gppnhp-Ranbp1-Rangap Complex
pdb|1K5D|F Chain F, Crystal Structure Of Ran-Gppnhp-Ranbp1-Rangap Complex
pdb|1K5D|I Chain I, Crystal Structure Of Ran-Gppnhp-Ranbp1-Rangap Complex
pdb|1K5D|L Chain L, Crystal Structure Of Ran-Gppnhp-Ranbp1-Rangap Complex
pdb|1K5G|C Chain C, Crystal Structure Of Ran-Gdp-Alfx-Ranbp1-Rangap Complex
pdb|1K5G|F Chain F, Crystal Structure Of Ran-Gdp-Alfx-Ranbp1-Rangap Complex
pdb|1K5G|I Chain I, Crystal Structure Of Ran-Gdp-Alfx-Ranbp1-Rangap Complex
pdb|1K5G|L Chain L, Crystal Structure Of Ran-Gdp-Alfx-Ranbp1-Rangap Complex
Length = 386
Score = 27.3 bits (59), Expect = 0.51
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 67 KDATIKALQEQLKAALKALNSKEMNHSKEE---TFKNPPIDLKQTQTPLKKTFLQSNGI 122
KD +AL+ L+A LK + S T + P ID TPL+ +L +NG+
Sbjct: 76 KDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGL 134
>pdb|1RRO| Rat Oncomodulin
pdb|1OMD| Oncomodulin
Length = 108
Score = 26.2 bits (56), Expect = 1.1
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 34 NNQPSLLNDDEVKYPLQDYTFTQNPQPTNTESSKDATIKALQEQLKAALKALNSKEMNHS 93
N+Q L+ DE+KY LQ + Q+ TES + + A + A +EM HS
Sbjct: 52 NDQSGYLDGDELKYFLQKF---QSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 23.9 bits (50), Expect = 5.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 12 VGGFATIITISLIYHQKPKAPLNNQPSLLNDDEVKYPLQD 51
+ G + II I + + PKA LN E+ P+QD
Sbjct: 217 IAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQD 256
>pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
Length = 376
Score = 23.9 bits (50), Expect = 5.7
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 12 VGGFATIITISLIYHQKPKAPLNNQPSLLNDDEVKYPLQD 51
+ G + II I + + PKA LN E+ P+QD
Sbjct: 217 IAGASRIIAIDINGEKFPKAKALGATDCLNPRELDKPVQD 256
>pdb|1GAD|O Chain O, Mol_id: 1; Molecule: D-Glyceraldehyde-3-Phosphate
Dehydrogenase; Chain: O, P; Ec: 1.2.1.12; Engineered:
Yes; Other_details: Wild Type, Holo Form
pdb|1GAD|P Chain P, Mol_id: 1; Molecule: D-Glyceraldehyde-3-Phosphate
Dehydrogenase; Chain: O, P; Ec: 1.2.1.12; Engineered:
Yes; Other_details: Wild Type, Holo Form
pdb|1DC6|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes.
pdb|1DC6|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes.
pdb|1DC5|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC5|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC3|A Chain A, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
pdb|1DC3|B Chain B, Structural Analysis Of Glyceraldehyde 3-Phosphate
Dehydrogenase From Escherichia Coli: Direct Evidence For
Substrate Binding And Cofactor-Induced Conformational
Changes
Length = 330
Score = 23.9 bits (50), Expect = 5.7
Identities = 15/35 (42%), Positives = 19/35 (53%), Gaps = 4/35 (11%)
Query: 60 PTNTESSKDATIK----ALQEQLKAALKALNSKEM 90
PT S D T++ A EQ+KAA+KA EM
Sbjct: 233 PTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEM 267
>pdb|1GAE|O Chain O, Mol_id: 1; Molecule: D-Glyceraldehyde-3-Phosphate
Dehydrogenase; Chain: O, P; Ec: 1.2.1.12; Engineered:
Yes; Mutation: N313t; Other_details: Holo Form
pdb|1GAE|P Chain P, Mol_id: 1; Molecule: D-Glyceraldehyde-3-Phosphate
Dehydrogenase; Chain: O, P; Ec: 1.2.1.12; Engineered:
Yes; Mutation: N313t; Other_details: Holo Form
Length = 330
Score = 23.9 bits (50), Expect = 5.7
Identities = 15/35 (42%), Positives = 19/35 (53%), Gaps = 4/35 (11%)
Query: 60 PTNTESSKDATIK----ALQEQLKAALKALNSKEM 90
PT S D T++ A EQ+KAA+KA EM
Sbjct: 233 PTPNVSVVDLTVRLEKAATYEQIKAAVKAAAEGEM 267
>pdb|1MD3|A Chain A, A Folding Mutant Of Human Class Pi Glutathione
Transferase, Created By Mutating Glycine 146 Of The
Wild-Type Protein To Alanine
pdb|1MD3|B Chain B, A Folding Mutant Of Human Class Pi Glutathione
Transferase, Created By Mutating Glycine 146 Of The
Wild-Type Protein To Alanine
Length = 209
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 109 TNYEAGKDDYVKALPGQLK 127
>pdb|1EOH|A Chain A, Glutathione Transferase P1-1
pdb|1EOH|B Chain B, Glutathione Transferase P1-1
pdb|1EOH|C Chain C, Glutathione Transferase P1-1
pdb|1EOH|D Chain D, Glutathione Transferase P1-1
pdb|1EOH|E Chain E, Glutathione Transferase P1-1
pdb|1EOH|F Chain F, Glutathione Transferase P1-1
pdb|1EOH|G Chain G, Glutathione Transferase P1-1
pdb|1EOH|H Chain H, Glutathione Transferase P1-1
Length = 209
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 109 TNYEAGKDDYVKALPGQLK 127
>pdb|4GSS|A Chain A, Human Glutathione S-Transferase P1-1 Y108f Mutant
pdb|4GSS|B Chain B, Human Glutathione S-Transferase P1-1 Y108f Mutant
Length = 209
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 109 TNYEAGKDDYVKALPGQLK 127
>pdb|1AQW|A Chain A, Glutathione S-Transferase In Complex With Glutathione
pdb|1AQW|B Chain B, Glutathione S-Transferase In Complex With Glutathione
pdb|1AQW|C Chain C, Glutathione S-Transferase In Complex With Glutathione
pdb|1AQW|D Chain D, Glutathione S-Transferase In Complex With Glutathione
pdb|8GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|8GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|8GSS|C Chain C, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|7GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|7GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|1GSS|A Chain A, Glutathione S-Transferase (E.C.2.5.1.18) (Class Pi)
pdb|1GSS|B Chain B, Glutathione S-Transferase (E.C.2.5.1.18) (Class Pi)
pdb|3GSS|A Chain A, Human Glutathione S-Transferase P1-1 In Complex With
Ethacrynic Acid-Glutathione Conjugate
pdb|3GSS|B Chain B, Human Glutathione S-Transferase P1-1 In Complex With
Ethacrynic Acid-Glutathione Conjugate
pdb|19GS|A Chain A, Glutathione S-Transferase P1-1
pdb|19GS|B Chain B, Glutathione S-Transferase P1-1
pdb|2GSS|A Chain A, Human Glutathione S-Transferase P1-1 In Complex With
Ethacrynic Acid
pdb|2GSS|B Chain B, Human Glutathione S-Transferase P1-1 In Complex With
Ethacrynic Acid
pdb|9GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With S-Hexyl
Glutathione
pdb|9GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With S-Hexyl
Glutathione
pdb|6GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|6GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|5GSS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|5GSS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With
Glutathione
pdb|1AQX|A Chain A, Glutathione S-Transferase In Complex With Meisenheimer
Complex
pdb|1AQX|B Chain B, Glutathione S-Transferase In Complex With Meisenheimer
Complex
pdb|1AQX|C Chain C, Glutathione S-Transferase In Complex With Meisenheimer
Complex
pdb|1AQX|D Chain D, Glutathione S-Transferase In Complex With Meisenheimer
Complex
pdb|10GS|A Chain A, Human Glutathione S-Transferase P1-1, Complex With Ter117
pdb|10GS|B Chain B, Human Glutathione S-Transferase P1-1, Complex With Ter117
pdb|20GS|A Chain A, Glutathione S-Transferase P1-1 Complexed With Cibacron
Blue
pdb|20GS|B Chain B, Glutathione S-Transferase P1-1 Complexed With Cibacron
Blue
Length = 209
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 109 TNYEAGKDDYVKALPGQLK 127
>pdb|1AQV|A Chain A, Glutathione S-Transferase In Complex With
P-Bromobenzylglutathione
pdb|1AQV|B Chain B, Glutathione S-Transferase In Complex With
P-Bromobenzylglutathione
Length = 209
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 109 TNYEAGKDDYVKALPGQLK 127
>pdb|1EOG|A Chain A, Crystal Structure Of Pi Class Glutathione Transferase
pdb|1EOG|B Chain B, Crystal Structure Of Pi Class Glutathione Transferase
Length = 208
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 108 TNYEAGKDDYVKALPGQLK 126
>pdb|1LBK|A Chain A, Crystal Structure Of A Recombinant Glutathione
Transferase, Created By Replacing The Last Seven
Residues Of Each Subunit Of The Human Class Pi Isoenzyme
With The Additional C-Terminal Helix Of Human Class
Alpha Isoenzyme
pdb|1LBK|B Chain B, Crystal Structure Of A Recombinant Glutathione
Transferase, Created By Replacing The Last Seven
Residues Of Each Subunit Of The Human Class Pi Isoenzyme
With The Additional C-Terminal Helix Of Human Class
Alpha Isoenzyme
Length = 208
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 109 TNYEAGKDDYVKALPGQLK 127
>pdb|1PGT|A Chain A, Crystal Structure Of Human Glutathione S-Transferase
P1-1[v104] Complexed With S-Hexylglutathione
pdb|2PGT|A Chain A, Crystal Structure Of Human Glutathione S-Transferase
P1-1[v104] Complexed With
(9r,10r)-9-(S-Glutathionyl)-10-
Hydroxy-9,10-Dihydrophenanthrene
pdb|1PGT|B Chain B, Crystal Structure Of Human Glutathione S-Transferase
P1-1[v104] Complexed With S-Hexylglutathione
pdb|2PGT|B Chain B, Crystal Structure Of Human Glutathione S-Transferase
P1-1[v104] Complexed With
(9r,10r)-9-(S-Glutathionyl)-10-
Hydroxy-9,10-Dihydrophenanthrene
Length = 210
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 110 TNYEAGKDDYVKALPGQLK 128
>pdb|22GS|A Chain A, Human Glutathione S-Transferase P1-1 Y49f Mutant
pdb|22GS|B Chain B, Human Glutathione S-Transferase P1-1 Y49f Mutant
Length = 210
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 110 TNYEAGKDDYVKALPGQLK 128
>pdb|1TOL|A Chain A, Fusion Of N-Terminal Domain Of The Minor Coat Protein From
Gene Iii In Phage M13, And C-Terminal Domain Of E. Coli
Protein-Tola
Length = 222
Score = 23.5 bits (49), Expect = 7.4
Identities = 13/32 (40%), Positives = 16/32 (49%)
Query: 75 QEQLKAALKALNSKEMNHSKEETFKNPPIDLK 106
Q L AA A K + + E FKN P+D K
Sbjct: 181 QAALAAAKLAKIPKPPSQAVYEVFKNAPLDFK 212
>pdb|17GS|A Chain A, Glutathione S-Transferase P1-1
pdb|17GS|B Chain B, Glutathione S-Transferase P1-1
Length = 210
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 110 TNYEAGKDDYVKALPGQLK 128
>pdb|1MD4|A Chain A, A Folding Mutant Of Human Class Pi Glutathione
Transferase, Created By Mutating Glycine 146 Of The
Wild-Type Protein To Valine
pdb|1MD4|B Chain B, A Folding Mutant Of Human Class Pi Glutathione
Transferase, Created By Mutating Glycine 146 Of The
Wild-Type Protein To Valine
Length = 209
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 109 TNYEAGKDDYVKALPGQLK 127
>pdb|13GS|A Chain A, Glutathione S-Transferase Complexed With Sulfasalazine
pdb|3PGT|A Chain A, Crystal Structure Of Hgstp1-1[i104] Complexed With The Gsh
Conjugate Of (+)-Anti-Bpde
pdb|3PGT|B Chain B, Crystal Structure Of Hgstp1-1[i104] Complexed With The Gsh
Conjugate Of (+)-Anti-Bpde
pdb|13GS|B Chain B, Glutathione S-Transferase Complexed With Sulfasalazine
pdb|18GS|A Chain A, Glutathione S-Transferase P1-1 Complexed With
1-(S-Glutathionyl)-2,4-Dinitrobenzene
pdb|18GS|B Chain B, Glutathione S-Transferase P1-1 Complexed With
1-(S-Glutathionyl)-2,4-Dinitrobenzene
pdb|21GS|A Chain A, Human Glutathione S-Transferase P1-1 In Complex With
Chlorambucil
pdb|21GS|B Chain B, Human Glutathione S-Transferase P1-1 In Complex With
Chlorambucil
pdb|16GS|A Chain A, Glutathione S-Transferase P1-1 Apo Form 3
pdb|16GS|B Chain B, Glutathione S-Transferase P1-1 Apo Form 3
pdb|12GS|A Chain A, Glutathione S-Transferase Complexed With
S-Nonyl-Glutathione
pdb|12GS|B Chain B, Glutathione S-Transferase Complexed With
S-Nonyl-Glutathione
pdb|11GS|A Chain A, Glutathione S-Transferase Complexed With Ethacrynic
Acid-Glutathione Conjugate (Form Ii)
pdb|11GS|B Chain B, Glutathione S-Transferase Complexed With Ethacrynic
Acid-Glutathione Conjugate (Form Ii)
pdb|14GS|A Chain A, Glutathione S-Transferase P1-1 Apo Form 1
pdb|14GS|B Chain B, Glutathione S-Transferase P1-1 Apo Form 1
Length = 210
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 110 TNYEAGKDDYVKALPGQLK 128
>pdb|4PGT|A Chain A, Crystal Structure Of Hgstp1-1[v104] Complexed With The Gsh
Conjugate Of (+)-Anti-Bpde
pdb|4PGT|B Chain B, Crystal Structure Of Hgstp1-1[v104] Complexed With The Gsh
Conjugate Of (+)-Anti-Bpde
Length = 210
Score = 23.5 bits (49), Expect = 7.4
Identities = 11/19 (57%), Positives = 13/19 (67%)
Query: 61 TNTESSKDATIKALQEQLK 79
TN E+ KD +KAL QLK
Sbjct: 110 TNYEAGKDDYVKALPGQLK 128
>pdb|1AL3| Cofactor Binding Fragment Of Cysb From Klebsiella Aerogenes
Length = 324
Score = 23.5 bits (49), Expect = 7.4
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 29 PKAPLNNQPSLLNDDEVKYPLQDYTF 54
P+ PL + S+ ++ +YPL YTF
Sbjct: 174 PEHPLATKGSVSIEELAQYPLVTYTF 199
>pdb|1KZQ|A Chain A, Crystal Structure Of A Parasite Protein
pdb|1KZQ|B Chain B, Crystal Structure Of A Parasite Protein
Length = 289
Score = 23.1 bits (48), Expect = 9.6
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 55 TQNPQPTNTESSKDATIKALQEQLKAALKAL 85
T+NP N S K AT+ +E A K++
Sbjct: 204 TENPWQGNASSDKGATLTIKKEAFPAESKSV 234
>pdb|1IAT|A Chain A, Crystal Structure Of Human Phosphoglucose
IsomeraseNEUROLEUKINAUTOCRINE MOTILITY FACTORMATURATION
Factor
Length = 557
Score = 23.1 bits (48), Expect = 9.6
Identities = 16/63 (25%), Positives = 29/63 (45%), Gaps = 1/63 (1%)
Query: 40 LNDDEVKYPLQDYTFTQNPQPTNTESSKDATIKALQEQLKAALKALNSKEMNHSKEETFK 99
LN + + + TFT TN E++K+ ++A ++ A K + N +K + F
Sbjct: 198 LNPESSLFIIASKTFTTQETITNAETAKEWFLQAAKDP-SAVAKHFVALSTNTTKVKEFG 256
Query: 100 NPP 102
P
Sbjct: 257 IDP 259
>pdb|1IRI|A Chain A, Crystal Structure Of Human Autocrine Motility Factor
Complexed With An Inhibitor
pdb|1IRI|B Chain B, Crystal Structure Of Human Autocrine Motility Factor
Complexed With An Inhibitor
pdb|1IRI|C Chain C, Crystal Structure Of Human Autocrine Motility Factor
Complexed With An Inhibitor
pdb|1IRI|D Chain D, Crystal Structure Of Human Autocrine Motility Factor
Complexed With An Inhibitor
pdb|1JIQ|A Chain A, Crystal Structure Of Human Autocrine Motility Factor
pdb|1JIQ|B Chain B, Crystal Structure Of Human Autocrine Motility Factor
pdb|1JIQ|C Chain C, Crystal Structure Of Human Autocrine Motility Factor
pdb|1JIQ|D Chain D, Crystal Structure Of Human Autocrine Motility Factor
Length = 558
Score = 23.1 bits (48), Expect = 9.6
Identities = 16/63 (25%), Positives = 29/63 (45%), Gaps = 1/63 (1%)
Query: 40 LNDDEVKYPLQDYTFTQNPQPTNTESSKDATIKALQEQLKAALKALNSKEMNHSKEETFK 99
LN + + + TFT TN E++K+ ++A ++ A K + N +K + F
Sbjct: 199 LNPESSLFIIASKTFTTQETITNAETAKEWFLQAAKDP-SAVAKHFVALSTNTTKVKEFG 257
Query: 100 NPP 102
P
Sbjct: 258 IDP 260
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.311 0.129 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 698,823
Number of Sequences: 13198
Number of extensions: 25029
Number of successful extensions: 59
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 39
Number of HSP's gapped (non-prelim): 25
length of query: 123
length of database: 2,899,336
effective HSP length: 77
effective length of query: 46
effective length of database: 1,883,090
effective search space: 86622140
effective search space used: 86622140
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 48 (23.1 bits)