BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645272|ref|NP_207442.1| UDP-N-acetylglucosamine
enolpyruvyl transferase (murZ) [Helicobacter pylori 26695]
(422 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1NAW|A Chain A, Enolpyruvyl Transferase >gi|2392465|pdb... 362 e-101
pdb|1EJD|A Chain A, Crystal Structure Of Unliganded Mura (T... 362 e-101
pdb|1UAE| Structure Of Udp-N-Acetylglucosamine Enolpyruvy... 361 e-101
pdb|1DLG|A Chain A, Crystal Structure Of The C115s Enteroba... 358 e-100
pdb|1A2N| Structure Of The C115a Mutant Of Mura Complexed... 358 e-100
pdb|1G6S|A Chain A, Structure Of Epsp Synthase Liganded Wit... 36 0.007
pdb|1O17|A Chain A, Anthranilate Phosphoribosyl-Transferase... 27 3.3
pdb|1YFM| Recombinant Yeast Fumarase 27 4.3
pdb|3BTA|A Chain A, Crystal Structure Of Botulinum Neurotox... 27 5.7
>pdb|1NAW|A Chain A, Enolpyruvyl Transferase
pdb|1NAW|B Chain B, Enolpyruvyl Transferase
Length = 419
Score = 362 bits (929), Expect = e-101
Identities = 201/422 (47%), Positives = 278/422 (65%), Gaps = 7/422 (1%)
Query: 1 MDFLEIVGQVPLKGEVEISGAKNSALPILAATLLSRQEVKIKSLPQVVDIKAMALLLQNL 60
MD + G L+GEV ISGAKN+ALPIL A LL+ + V+I+++P++ DI LL L
Sbjct: 1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQL 60
Query: 61 GASLEWLNPNTLQIGAKSLNHTEATYDLVRKMRASILVLGPLLARFKECLVSLPGGCAIG 120
G +E ++ I A ++N+ A YDLV+ MRASI LGPL+ARF + VSLPGGCAIG
Sbjct: 61 GTKVE--RNGSVWIDASNVNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIG 118
Query: 121 ARPVDLHLKAMQQLGAKITIEQGYIHAKAPKGLKGNDILFDKISVTGTENALMAASLAKG 180
ARPVDLH+ +++LGA+I +E+GY+ A LKG I+ DK+SV T + AA+LA+G
Sbjct: 119 ARPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDKVSVGATVTIMSAATLAEG 178
Query: 181 ITRIINAAKEPEIAQLCAFLQSGGVEIHGIGSSELKIRGVENDALNLKDIQIIPDRIEAG 240
T I NAA+EPEI FL + G +I G G+ + I GVE L +++PDRIE G
Sbjct: 179 TTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVER--LGGGVYRVLPDRIETG 236
Query: 241 TYLCVGAITNSQLKINHIIPNHLQAITDKLIEIGFSLDIQEN--SIEIHPAKKRQAFEIT 298
T+L AI+ ++ + P+ L A+ KL E G ++ E+ S+++H K+ +A +
Sbjct: 237 TFLVAAAISGGKIVCRNAQPDTLDAVLAKLREAGADIETGEDWISLDMH-GKRPKAVTVR 295
Query: 299 TKEYPGFPTDMQAQFMALATQCLGTSVIEETLFENRFMHASELQRLGANISLKTNVATIS 358
T +P FPTDMQAQF L GT VI ET+FENRFMH EL R+GA+ +++N
Sbjct: 296 TAPHPAFPTDMQAQFTLLNLVAEGTGVITETIFENRFMHVPELIRMGAHAEIESNTVICH 355
Query: 359 GSTELTGSDVMATDLRASSALVLAALVAKGVSRVHRIYHLDRGYERLEDKINALGAKVAR 418
G +L+G+ VMATDLRAS++LVLA +A+G + V RIYH+DRGYER+EDK+ ALGA + R
Sbjct: 356 GVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIER 415
Query: 419 LK 420
+K
Sbjct: 416 VK 417
>pdb|1EJD|A Chain A, Crystal Structure Of Unliganded Mura (Type1)
pdb|1EJD|B Chain B, Crystal Structure Of Unliganded Mura (Type1)
pdb|1EYN|A Chain A, Structure Of Mura Liganded With The Extrinsic Fluorescence
Probe Ans
pdb|1EJC|A Chain A, Crystal Structure Of Unliganded Mura (Type2)
Length = 419
Score = 362 bits (929), Expect = e-101
Identities = 201/422 (47%), Positives = 278/422 (65%), Gaps = 7/422 (1%)
Query: 1 MDFLEIVGQVPLKGEVEISGAKNSALPILAATLLSRQEVKIKSLPQVVDIKAMALLLQNL 60
MD + G L+GEV ISGAKN+ALPIL A LL+ + V+I+++P++ DI LL L
Sbjct: 1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQL 60
Query: 61 GASLEWLNPNTLQIGAKSLNHTEATYDLVRKMRASILVLGPLLARFKECLVSLPGGCAIG 120
G +E ++ I A ++N+ A YDLV+ MRASI LGPL+ARF + VSLPGGCAIG
Sbjct: 61 GTKVE--RXGSVWIDASNVNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCAIG 118
Query: 121 ARPVDLHLKAMQQLGAKITIEQGYIHAKAPKGLKGNDILFDKISVTGTENALMAASLAKG 180
ARPVDLH+ +++LGA+I +E+GY+ A LKG I+ DK+SV T + AA+LA+G
Sbjct: 119 ARPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDKVSVGATVTIMSAATLAEG 178
Query: 181 ITRIINAAKEPEIAQLCAFLQSGGVEIHGIGSSELKIRGVENDALNLKDIQIIPDRIEAG 240
T I NAA+EPEI FL + G +I G G+ + I GVE L +++PDRIE G
Sbjct: 179 TTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVER--LGGGVYRVLPDRIETG 236
Query: 241 TYLCVGAITNSQLKINHIIPNHLQAITDKLIEIGFSLDIQEN--SIEIHPAKKRQAFEIT 298
T+L AI+ ++ + P+ L A+ KL E G ++ E+ S+++H K+ +A +
Sbjct: 237 TFLVAAAISGGKIVCRNAQPDTLDAVLAKLREAGADIETGEDWISLDMH-GKRPKAVTVR 295
Query: 299 TKEYPGFPTDMQAQFMALATQCLGTSVIEETLFENRFMHASELQRLGANISLKTNVATIS 358
T +P FPTDMQAQF L GT VI ET+FENRFMH EL R+GA+ +++N
Sbjct: 296 TAPHPAFPTDMQAQFTLLNLVAEGTGVITETIFENRFMHVPELIRMGAHAEIESNTVICH 355
Query: 359 GSTELTGSDVMATDLRASSALVLAALVAKGVSRVHRIYHLDRGYERLEDKINALGAKVAR 418
G +L+G+ VMATDLRAS++LVLA +A+G + V RIYH+DRGYER+EDK+ ALGA + R
Sbjct: 356 GVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIER 415
Query: 419 LK 420
+K
Sbjct: 416 VK 417
>pdb|1UAE| Structure Of Udp-N-Acetylglucosamine Enolpyruvyl Transferase
Length = 419
Score = 361 bits (927), Expect = e-101
Identities = 199/422 (47%), Positives = 276/422 (65%), Gaps = 7/422 (1%)
Query: 1 MDFLEIVGQVPLKGEVEISGAKNSALPILAATLLSRQEVKIKSLPQVVDIKAMALLLQNL 60
MD + G L+GEV ISGAKN+ALPIL A LL+ + V+I+++P++ D+ LL L
Sbjct: 1 MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQL 60
Query: 61 GASLEWLNPNTLQIGAKSLNHTEATYDLVRKMRASILVLGPLLARFKECLVSLPGGCAIG 120
GA +E ++ I A+ +N A YDLV+ MRASI LGPL+ARF + VSLPGGC IG
Sbjct: 61 GAKVE--RNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGCTIG 118
Query: 121 ARPVDLHLKAMQQLGAKITIEQGYIHAKAPKGLKGNDILFDKISVTGTENALMAASLAKG 180
ARPVDLH+ ++QLGA I +E+GY+ A LKG I+ DK+SV T + AA+LA+G
Sbjct: 119 ARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCAATLAEG 178
Query: 181 ITRIINAAKEPEIAQLCAFLQSGGVEIHGIGSSELKIRGVENDALNLKDIQIIPDRIEAG 240
T I NAA+EPEI FL + G +I G G+ + I GVE L +++PDRIE G
Sbjct: 179 TTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVER--LGGGVYRVLPDRIETG 236
Query: 241 TYLCVGAITNSQLKINHIIPNHLQAITDKLIEIGFSLDIQEN--SIEIHPAKKRQAFEIT 298
T+L AI+ ++ + P+ L A+ KL + G +++ E+ S+++H K+ +A +
Sbjct: 237 TFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMH-GKRPKAVNVR 295
Query: 299 TKEYPGFPTDMQAQFMALATQCLGTSVIEETLFENRFMHASELQRLGANISLKTNVATIS 358
T +P FPTDMQAQF L GT I ET+FENRFMH EL R+GA+ +++N
Sbjct: 296 TAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICH 355
Query: 359 GSTELTGSDVMATDLRASSALVLAALVAKGVSRVHRIYHLDRGYERLEDKINALGAKVAR 418
G +L+G+ VMATDLRAS++LVLA +A+G + V RIYH+DRGYER+EDK+ ALGA + R
Sbjct: 356 GVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIER 415
Query: 419 LK 420
+K
Sbjct: 416 VK 417
>pdb|1DLG|A Chain A, Crystal Structure Of The C115s Enterobacter Cloacae Mura
In The Un-Liganded State
pdb|1DLG|B Chain B, Crystal Structure Of The C115s Enterobacter Cloacae Mura
In The Un-Liganded State
Length = 419
Score = 358 bits (919), Expect = e-100
Identities = 200/422 (47%), Positives = 277/422 (65%), Gaps = 7/422 (1%)
Query: 1 MDFLEIVGQVPLKGEVEISGAKNSALPILAATLLSRQEVKIKSLPQVVDIKAMALLLQNL 60
MD + G L+GEV ISGAKN+ALPIL A LL+ + V+I+++P++ DI LL L
Sbjct: 1 MDKFRVQGPTRLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDIDTTMKLLTQL 60
Query: 61 GASLEWLNPNTLQIGAKSLNHTEATYDLVRKMRASILVLGPLLARFKECLVSLPGGCAIG 120
G +E ++ I A ++N+ A YDLV+ MRASI LGPL+ARF + VSLPGG AIG
Sbjct: 61 GTKVE--RXGSVWIDASNVNNFSAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGSAIG 118
Query: 121 ARPVDLHLKAMQQLGAKITIEQGYIHAKAPKGLKGNDILFDKISVTGTENALMAASLAKG 180
ARPVDLH+ +++LGA+I +E+GY+ A LKG I+ DK+SV T + AA+LA+G
Sbjct: 119 ARPVDLHIFGLEKLGAEIKLEEGYVKASVNGRLKGAHIVMDKVSVGATVTIMSAATLAEG 178
Query: 181 ITRIINAAKEPEIAQLCAFLQSGGVEIHGIGSSELKIRGVENDALNLKDIQIIPDRIEAG 240
T I NAA+EPEI FL + G +I G G+ + I GVE L +++PDRIE G
Sbjct: 179 TTIIENAAREPEIVDTANFLVALGAKISGQGTDRITIEGVER--LGGGVYRVLPDRIETG 236
Query: 241 TYLCVGAITNSQLKINHIIPNHLQAITDKLIEIGFSLDIQEN--SIEIHPAKKRQAFEIT 298
T+L AI+ ++ + P+ L A+ KL E G ++ E+ S+++H K+ +A +
Sbjct: 237 TFLVAAAISGGKIVCRNAQPDTLDAVLAKLREAGADIETGEDWISLDMH-GKRPKAVTVR 295
Query: 299 TKEYPGFPTDMQAQFMALATQCLGTSVIEETLFENRFMHASELQRLGANISLKTNVATIS 358
T +P FPTDMQAQF L GT VI ET+FENRFMH EL R+GA+ +++N
Sbjct: 296 TAPHPAFPTDMQAQFTLLNLVAEGTGVITETIFENRFMHVPELIRMGAHAEIESNTVICH 355
Query: 359 GSTELTGSDVMATDLRASSALVLAALVAKGVSRVHRIYHLDRGYERLEDKINALGAKVAR 418
G +L+G+ VMATDLRAS++LVLA +A+G + V RIYH+DRGYER+EDK+ ALGA + R
Sbjct: 356 GVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIER 415
Query: 419 LK 420
+K
Sbjct: 416 VK 417
>pdb|1A2N| Structure Of The C115a Mutant Of Mura Complexed With The
Fluorinated Analog Of The Reaction Tetrahedral
Intermediate
Length = 419
Score = 358 bits (918), Expect = e-100
Identities = 198/422 (46%), Positives = 275/422 (64%), Gaps = 7/422 (1%)
Query: 1 MDFLEIVGQVPLKGEVEISGAKNSALPILAATLLSRQEVKIKSLPQVVDIKAMALLLQNL 60
MD + G L+GEV ISGAKN+ALPIL A LL+ + V+I+++P++ D+ LL L
Sbjct: 1 MDKFRVQGPTKLQGEVTISGAKNAALPILFAALLAEEPVEIQNVPKLKDVDTSMKLLSQL 60
Query: 61 GASLEWLNPNTLQIGAKSLNHTEATYDLVRKMRASILVLGPLLARFKECLVSLPGGCAIG 120
GA +E ++ I A+ +N A YDLV+ MRASI LGPL+ARF + VSLPGG IG
Sbjct: 61 GAKVE--RNGSVHIDARDVNVFCAPYDLVKTMRASIWALGPLVARFGQGQVSLPGGATIG 118
Query: 121 ARPVDLHLKAMQQLGAKITIEQGYIHAKAPKGLKGNDILFDKISVTGTENALMAASLAKG 180
ARPVDLH+ ++QLGA I +E+GY+ A LKG I+ DK+SV T + AA+LA+G
Sbjct: 119 ARPVDLHISGLEQLGATIKLEEGYVKASVDGRLKGAHIVMDKVSVGATVTIMCAATLAEG 178
Query: 181 ITRIINAAKEPEIAQLCAFLQSGGVEIHGIGSSELKIRGVENDALNLKDIQIIPDRIEAG 240
T I NAA+EPEI FL + G +I G G+ + I GVE L +++PDRIE G
Sbjct: 179 TTIIENAAREPEIVDTANFLITLGAKISGQGTDRIVIEGVER--LGGGVYRVLPDRIETG 236
Query: 241 TYLCVGAITNSQLKINHIIPNHLQAITDKLIEIGFSLDIQEN--SIEIHPAKKRQAFEIT 298
T+L AI+ ++ + P+ L A+ KL + G +++ E+ S+++H K+ +A +
Sbjct: 237 TFLVAAAISRGKIICRNAQPDTLDAVLAKLRDAGADIEVGEDWISLDMH-GKRPKAVNVR 295
Query: 299 TKEYPGFPTDMQAQFMALATQCLGTSVIEETLFENRFMHASELQRLGANISLKTNVATIS 358
T +P FPTDMQAQF L GT I ET+FENRFMH EL R+GA+ +++N
Sbjct: 296 TAPHPAFPTDMQAQFTLLNLVAEGTGFITETVFENRFMHVPELSRMGAHAEIESNTVICH 355
Query: 359 GSTELTGSDVMATDLRASSALVLAALVAKGVSRVHRIYHLDRGYERLEDKINALGAKVAR 418
G +L+G+ VMATDLRAS++LVLA +A+G + V RIYH+DRGYER+EDK+ ALGA + R
Sbjct: 356 GVEKLSGAQVMATDLRASASLVLAGCIAEGTTVVDRIYHIDRGYERIEDKLRALGANIER 415
Query: 419 LK 420
+K
Sbjct: 416 VK 417
>pdb|1G6S|A Chain A, Structure Of Epsp Synthase Liganded With Shikimate-3-
Phosphate And Glyphosate
pdb|1G6T|A Chain A, Structure Of Epsp Synthase Liganded With Shikimate-3-
Phosphate
Length = 427
Score = 36.2 bits (82), Expect = 0.007
Identities = 89/404 (22%), Positives = 159/404 (39%), Gaps = 28/404 (6%)
Query: 1 MDFLEIVGQVPLKGEVEISGAKNSALPILAATLLSRQEVKIKSLPQVVDIKAMALLLQNL 60
M+ L + + G + + G+K+ + L L+ + + +L D++ M L L
Sbjct: 1 MESLTLQPIARVDGTINLPGSKSVSNRALLLAALAHGKTVLTNLLDSDDVRHMLNALTAL 60
Query: 61 GASLEWLNPNTL--QIGAKSLNHTEATYDLVRKMRASILVLGPLLARFKECL----VSLP 114
G S T IG H E +L + + + PL A CL + L
Sbjct: 61 GVSYTLSADRTRCEIIGNGGPLHAEGALELF--LGNAGTAMRPLAAAL--CLGSNDIVLT 116
Query: 115 GGCAIGARPVDLHLKAMQQLGAKITI--EQGYIHAKAPKGLKGNDILFD-KISVTGTENA 171
G + RP+ + A++ GAKIT ++ Y + G G ++ D +S
Sbjct: 117 GEPRMKERPIGHLVDALRLGGAKITYLEQENYPPLRLQGGFTGGNVDVDGSVSSQFLTAL 176
Query: 172 LMAASLAKGITRII---NAAKEPEIAQLCAFLQSGGVEIHGIGSSELKIRGVENDALNLK 228
LM A LA T I + +P I +++ GVEI + ++G ++ +
Sbjct: 177 LMTAPLAPEDTVIRIKGDLVSKPYIDITLNLMKTFGVEIENQHYQQFVVKGGQS-YQSPG 235
Query: 229 DIQIIPDRIEAGTYLCVGAITNSQLKINHIIPNHLQA---ITDKLIEIGFSLDIQENSIE 285
+ D A +L AI +K+ I N +Q D L ++G ++ ++ I
Sbjct: 236 TYLVEGDASSASYFLAAAAIKGGTVKVTGIGRNSMQGDIRFADVLEKMGATICWGDDYIS 295
Query: 286 IHPAKKRQAFEITTKEYP-GFPTDMQAQFMALATQCLGTSV---IEETLFENRFMHASEL 341
+ A ++ P T A A T L ++ET + F A+EL
Sbjct: 296 C-TRGELNAIDMDMNHIPDAAMTIATAALFAKGTTTLRNIYNWRVKET--DRLFAMATEL 352
Query: 342 QRLGANISLKTNVATISGSTELTGSDVMA-TDLRASSALVLAAL 384
+++GA + + I+ +L +++ D R + L AL
Sbjct: 353 RKVGAEVEEGHDYIRITPPEKLNFAEIATYNDHRMAMCFSLVAL 396
>pdb|1O17|A Chain A, Anthranilate Phosphoribosyl-Transferase (Trpd)
pdb|1O17|B Chain B, Anthranilate Phosphoribosyl-Transferase (Trpd)
pdb|1O17|C Chain C, Anthranilate Phosphoribosyl-Transferase (Trpd)
pdb|1O17|D Chain D, Anthranilate Phosphoribosyl-Transferase (Trpd)
Length = 345
Score = 27.3 bits (59), Expect = 3.3
Identities = 20/53 (37%), Positives = 29/53 (53%), Gaps = 6/53 (11%)
Query: 206 EIHGIGSSELKI---RGVENDALNLKDIQIIPDRIEAGTYLCVGAITNSQLKI 255
E+ IG++ +KI RG+E LN+ D I P IE L V + +S +KI
Sbjct: 224 EVSPIGNTFMKIVSKRGIEEVKLNVTDFGISPIPIEK---LIVNSAEDSAIKI 273
>pdb|1YFM| Recombinant Yeast Fumarase
Length = 488
Score = 26.9 bits (58), Expect = 4.3
Identities = 28/126 (22%), Positives = 53/126 (41%), Gaps = 8/126 (6%)
Query: 185 INAAKEPEIAQLCAFLQSGGVEIHGIGSS---ELKIRGVENDALNLKDIQIIPDRIEAGT 241
+N + + Q+C + I GS EL + A L I++I D +
Sbjct: 350 VNPTQNEALTQVCVQVMGNNAAITFAGSQGQFELNVFKPVMIANLLNSIRLITDAAYSFR 409
Query: 242 YLCVGAITNSQLKINHIIPNHLQAITDKLIEIGF--SLDIQENSIEIHPAKKRQAFE--- 296
CV I ++ +I+ ++ L +T +IG+ + + +N+ + K A E
Sbjct: 410 VHCVEGIKANEPRIHELLTKSLMLVTALNPKIGYDAASKVAKNAHKKGITLKESALELGV 469
Query: 297 ITTKEY 302
+T KE+
Sbjct: 470 LTEKEF 475
>pdb|3BTA|A Chain A, Crystal Structure Of Botulinum Neurotoxin Serotype A
Length = 1295
Score = 26.6 bits (57), Expect = 5.7
Identities = 15/72 (20%), Positives = 34/72 (46%), Gaps = 1/72 (1%)
Query: 125 DLHLKAMQQLGAKITIEQGYIHAKAPKGLKGNDILFDKISVTGTENALMAASLAKGITRI 184
+++L + G K I++ Y ++ ND ++ + V E L + G+ +I
Sbjct: 1146 NIYLNSSLYRGTKFIIKK-YASGNKDNIVRNNDRVYINVVVKNKEYRLATNASQAGVEKI 1204
Query: 185 INAAKEPEIAQL 196
++A + P++ L
Sbjct: 1205 LSALEIPDVGNL 1216
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.318 0.135 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,109,578
Number of Sequences: 13198
Number of extensions: 79290
Number of successful extensions: 245
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 221
Number of HSP's gapped (non-prelim): 10
length of query: 422
length of database: 2,899,336
effective HSP length: 91
effective length of query: 331
effective length of database: 1,698,318
effective search space: 562143258
effective search space used: 562143258
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)