BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645494|ref|NP_207669.1| catalase [Helicobacter
pylori 26695]
(505 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1M85|A Chain A, Structure Of Proteus Mirabilis Catalase... 588 e-169
pdb|1E93|A Chain A, High Resolution Structure And Biochemic... 588 e-169
pdb|4BLC|A Chain A, The Structure Of Orthorhombic Crystals ... 495 e-141
pdb|1QQW|B Chain B, Crystal Structure Of Human Erythrocyte ... 495 e-141
pdb|1DGF|A Chain A, Human Erythrocyte Catalase >gi|7245803|... 495 e-141
pdb|1DGH|C Chain C, Human Erythrocyte Catalase 3-Amino-1,2,... 495 e-141
pdb|1DGH|B Chain B, Human Erythrocyte Catalase 3-Amino-1,2,... 492 e-140
pdb|1GWE|A Chain A, Atomic Resolution Structure Of Micrococ... 432 e-122
pdb|1HBZ|A Chain A, Catalase From Micrococcus Lysodeikticu 431 e-122
pdb|1GWF|A Chain A, Compound Ii Structure Of Micrococcus Ly... 425 e-120
pdb|1M7S|A Chain A, Crystal Structure Analysis Of Catalase ... 412 e-116
pdb|1QF7|A Chain A, Structure Of The Mutant His392gln Of Ca... 391 e-109
pdb|1GGE|A Chain A, Crystal Structure Of Catalase Hpii From... 390 e-109
pdb|1GGK|A Chain A, Crystal Structure Of Catalase Hpii From... 389 e-109
pdb|1CF9|A Chain A, Structure Of The Mutant Val169cys Of Ca... 389 e-109
pdb|1A4E|A Chain A, Catalase A From Saccharomyces Cerevisia... 388 e-109
pdb|1GG9|A Chain A, Crystal Structure Of Catalase Hpii From... 388 e-109
pdb|1GGJ|A Chain A, Crystal Structure Of Catalase Hpii From... 387 e-108
pdb|1GGH|A Chain A, Crystal Structure Of Catalase Hpii From... 387 e-108
pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution O... 28 2.4
pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Pol... 28 2.4
pdb|1JGC|A Chain A, The 2.6 A Structure Resolution Of Rhodo... 27 4.1
pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxida... 27 4.1
pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxida... 27 4.1
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat... 27 7.0
pdb|1MHO| The 2.0 A Structure Of Holo S100b From Bovine B... 27 7.0
pdb|1ICU|B Chain B, The Structure Of Escherichia Coli Nitro... 27 7.0
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 St... 27 7.0
pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected... 27 7.0
pdb|1DS7|B Chain B, A Minor Fmn-Dependent Nitroreductase Fr... 27 7.0
>pdb|1M85|A Chain A, Structure Of Proteus Mirabilis Catalase For The Native
Form
pdb|1MQF|A Chain A, Compound I From Proteus Mirabilis Catalase
pdb|2CAF| Catalase Compound I
pdb|2CAG| Catalase Compound Ii
pdb|2CAH| Structure Of Proteus Mirabilis Pr Catalase For The Native Form
(E-Fe(Iii)) Complexed With Nadph
Length = 484
Score = 588 bits (1517), Expect = e-169
Identities = 292/492 (59%), Positives = 366/492 (74%), Gaps = 15/492 (3%)
Query: 7 KQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTF 66
K TTA GAPV D+NNVITAGPRGP+LLQ WFLEKLA FDRE IPER HAKGSGA+GTF
Sbjct: 5 KLTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRXHAKGSGAFGTF 64
Query: 67 TVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDL 126
TVT DITKYT+AKIFS+VGKKTE F RFSTVAGERG+ADA RD RGFA+K+YTEEGNWD+
Sbjct: 65 TVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDM 124
Query: 127 VGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGI 186
VGNNTPVF++RD +KFPD H KRDP+TN+ N WDF+S++PESL+Q+T MSDRG+
Sbjct: 125 VGNNTPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLTIDMSDRGL 184
Query: 187 PKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDL 246
P S+R + GFGSHT+S IN ERFWVKFHF QG+K+L ++EA + D +S+QRDL
Sbjct: 185 PLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQGIKNLMDDEAEALVGKDRESSQRDL 244
Query: 247 FNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENY 306
F AI RGD+P+WKL IQ+MPE++A ++PFD+TK+W DYPLM+VG ELN+NP+NY
Sbjct: 245 FEAIERGDYPRWKLQIQIMPEKEASTVPYNPFDLTKVWPHADYPLMDVGYFELNRNPDNY 304
Query: 307 FAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSS 366
F++VEQAAFSPAN+VPGI +SPD+MLQGRLFSYGD HRYRLGVN+ QIPVN P+CPFH+
Sbjct: 305 FSDVEQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNY 364
Query: 367 SRDGYMQ-NGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDY 425
RDG M+ +G G+ Y P+S ++E ++P + IE + WN +D DY
Sbjct: 365 HRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLS---IEGAADHWN---HREDEDY 418
Query: 426 YTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKKALEK 485
++QP Y L DE +R+ I L+ + KE +Q++ F K P+Y GV+KA+
Sbjct: 419 FSQPRALYELLSDDEHQRMFARIAGELSQAS-KETQQRQIDLFTKVHPEYGAGVEKAI-- 475
Query: 486 HQKMMKDMHGKD 497
K + GKD
Sbjct: 476 -----KVLEGKD 482
>pdb|1E93|A Chain A, High Resolution Structure And Biochemical Properties Of A
Recombinant Catalase Depleted In Iron
Length = 484
Score = 588 bits (1517), Expect = e-169
Identities = 292/492 (59%), Positives = 366/492 (74%), Gaps = 15/492 (3%)
Query: 7 KQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTF 66
K TTA GAPV D+NNVITAGPRGP+LLQ WFLEKLA FDRE IPER HAKGSGA+GTF
Sbjct: 5 KLTTAAGAPVVDNNNVITAGPRGPMLLQDVWFLEKLAHFDREVIPERRXHAKGSGAFGTF 64
Query: 67 TVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDL 126
TVT DITKYT+AKIFS+VGKKTE F RFSTVAGERG+ADA RD RGFA+K+YTEEGNWD+
Sbjct: 65 TVTHDITKYTRAKIFSEVGKKTEMFARFSTVAGERGAADAERDIRGFALKFYTEEGNWDM 124
Query: 127 VGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGI 186
VGNNTPVF++RD +KFPD H KRDP+TN+ N WDF+S++PESL+Q+T MSDRG+
Sbjct: 125 VGNNTPVFYLRDPLKFPDLNHIVKRDPRTNMRNMAYKWDFFSHLPESLHQLTIDMSDRGL 184
Query: 187 PKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDL 246
P S+R + GFGSHT+S IN ERFWVKFHF QG+K+L ++EA + D +S+QRDL
Sbjct: 185 PLSYRFVHGFGSHTYSFINKDNERFWVKFHFRCQQGIKNLMDDEAEALVGKDRESSQRDL 244
Query: 247 FNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENY 306
F AI RGD+P+WKL IQ+MPE++A ++PFD+TK+W DYPLM+VG ELN+NP+NY
Sbjct: 245 FEAIKRGDYPRWKLQIQIMPEKEASTVPYNPFDLTKVWPHADYPLMDVGYFELNRNPDNY 304
Query: 307 FAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSS 366
F++VEQAAFSPAN+VPGI +SPD+MLQGRLFSYGD HRYRLGVN+ QIPVN P+CPFH+
Sbjct: 305 FSDVEQAAFSPANIVPGISFSPDKMLQGRLFSYGDAHRYRLGVNHHQIPVNAPKCPFHNY 364
Query: 367 SRDGYMQ-NGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDY 425
RDG M+ +G G+ Y P+S ++E ++P + IE + WN +D DY
Sbjct: 365 HRDGAMRVDGNSGNGITYEPNSGGVFQEQPDFKEPPLS---IEGAADHWN---HREDEDY 418
Query: 426 YTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKKALEK 485
++QP Y L DE +R+ I L+ + KE +Q++ F K P+Y GV+KA+
Sbjct: 419 FSQPRALYELLSDDEHQRMFARIAGELSQAS-KETQQRQIDLFTKVHPEYGAGVEKAI-- 475
Query: 486 HQKMMKDMHGKD 497
K + GKD
Sbjct: 476 -----KVLEGKD 482
>pdb|4BLC|A Chain A, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|B Chain B, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|C Chain C, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|4BLC|D Chain D, The Structure Of Orthorhombic Crystals Of Beef Liver
Catalase
pdb|8CAT|A Chain A, Catalase (E.C.1.11.1.6)
pdb|8CAT|B Chain B, Catalase (E.C.1.11.1.6)
pdb|7CAT|A Chain A, Catalase (E.C.1.11.1.6)
Length = 506
Score = 495 bits (1275), Expect = e-141
Identities = 256/483 (53%), Positives = 333/483 (68%), Gaps = 11/483 (2%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G PV D N +T GPRGP+L+Q F +++A FDRERIPERVVHAKG+GA+G F V
Sbjct: 27 TTGGGNPVGDKLNSLTVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEV 86
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
T DIT+Y+KAK+F +GK+T RFSTVAGE GSAD VRDPRGFA+K+YTE+GNWDLVG
Sbjct: 87 THDITRYSKAKVFEHIGKRTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVG 146
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPK 188
NNTP+FFIRDA+ FP FIH+QKR+PQT+L + DMVWDFWS PESL+QV+++ SDRGIP
Sbjct: 147 NNTPIFFIRDALLFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPD 206
Query: 189 SFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFN 248
RHMDG+GSHTF L+NA GE + KFH+ T QG+K+L+ E+AA + DPD RDLFN
Sbjct: 207 GHRHMDGYGSHTFKLVNADGEAVYCKFHYKTDQGIKNLSVEDAARLAHEDPDYGLRDLFN 266
Query: 249 AIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFA 308
AIA G++P W L IQVM +A+ + F+PFD+TK+W DYPL+ VG + LN+NP NYFA
Sbjct: 267 AIATGNYPSWTLYIQVMTFSEAEIFPFNPFDLTKVWPHGDYPLIPVGKLVLNRNPVNYFA 326
Query: 309 EVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKP-RCPFHSSS 367
EVEQ AF P+N+ PGI SPD+MLQGRLF+Y DTHR+RLG NY QIPVN P R +
Sbjct: 327 EVEQLAFDPSNMPPGIEPSPDKMLQGRLFAYPDTHRHRLGPNYLQIPVNCPYRARVANYQ 386
Query: 368 RDGYM-QNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYY 426
RDG M G NY P+S + SA + + H + + +N + + D
Sbjct: 387 RDGPMCMMDNQGGAPNYYPNSFSAPEHQPSALEHR---THFSGDVQRFN----SANDDNV 439
Query: 427 TQPGDYY-RSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKKALEK 485
TQ +Y + L ++++RL + I L I K +++F P+Y ++ L+K
Sbjct: 440 TQVRTFYLKVLNEEQRKRLCENIAGHLKD-AQLFIQKKAVKNFSDVHPEYGSRIQALLDK 498
Query: 486 HQK 488
+ +
Sbjct: 499 YNE 501
>pdb|1QQW|B Chain B, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|A Chain A, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|C Chain C, Crystal Structure Of Human Erythrocyte Catalase
pdb|1QQW|D Chain D, Crystal Structure Of Human Erythrocyte Catalase
pdb|1F4J|C Chain C, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|A Chain A, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|B Chain B, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
pdb|1F4J|D Chain D, Structure Of Tetragonal Crystals Of Human Erythrocyte
Catalase
Length = 527
Score = 495 bits (1275), Expect = e-141
Identities = 255/482 (52%), Positives = 327/482 (66%), Gaps = 13/482 (2%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G PV D NVIT GPRGP+L+Q F +++A FDRERIPERVVHAKG+GA+G F V
Sbjct: 28 TTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEV 87
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
T DITKY+KAK+F +GKKT RFSTVAGE GSAD VRDPRGFA+K+YTE+GNWDLVG
Sbjct: 88 THDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVG 147
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPK 188
NNTP+FFIRD I FP FIH+QKR+PQT+L + DMVWDFWS PESL+QV+++ SDRGIP
Sbjct: 148 NNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPD 207
Query: 189 SFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFN 248
RHM+G+GSHTF L+NA GE + KFH+ T QG+K+L+ E+AA + + DPD RDLFN
Sbjct: 208 GHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFN 267
Query: 249 AIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFA 308
AIA G +P W IQVM A+ + F+PFD+TK+W +DYPL+ VG + LN+NP NYFA
Sbjct: 268 AIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFA 327
Query: 309 EVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKP-RCPFHSSS 367
EVEQ AF P+N+ PGI SPD+MLQGRLF+Y DTHR+RLG NY IPVN P R +
Sbjct: 328 EVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQ 387
Query: 368 RDGYM-QNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYY 426
RDG M G NY P+S ++ SA + + + F A+D +
Sbjct: 388 RDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNT------ANDDNVT 441
Query: 427 TQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIV--DKQLEHFKKADPKYAEGVKKALE 484
Y L ++++RL + I H+ +I K +++F + P Y ++ L+
Sbjct: 442 QVRAFYVNVLNEEQRKRLCENIA---GHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLD 498
Query: 485 KH 486
K+
Sbjct: 499 KY 500
>pdb|1DGF|A Chain A, Human Erythrocyte Catalase
pdb|1DGF|B Chain B, Human Erythrocyte Catalase
pdb|1DGF|C Chain C, Human Erythrocyte Catalase
pdb|1DGF|D Chain D, Human Erythrocyte Catalase
pdb|1DGG|A Chain A, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|B Chain B, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|C Chain C, Human Erythrocyte Catalse Cyanide Complex
pdb|1DGG|D Chain D, Human Erythrocyte Catalse Cyanide Complex
Length = 497
Score = 495 bits (1275), Expect = e-141
Identities = 255/482 (52%), Positives = 327/482 (66%), Gaps = 13/482 (2%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G PV D NVIT GPRGP+L+Q F +++A FDRERIPERVVHAKG+GA+G F V
Sbjct: 24 TTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEV 83
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
T DITKY+KAK+F +GKKT RFSTVAGE GSAD VRDPRGFA+K+YTE+GNWDLVG
Sbjct: 84 THDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVG 143
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPK 188
NNTP+FFIRD I FP FIH+QKR+PQT+L + DMVWDFWS PESL+QV+++ SDRGIP
Sbjct: 144 NNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPD 203
Query: 189 SFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFN 248
RHM+G+GSHTF L+NA GE + KFH+ T QG+K+L+ E+AA + + DPD RDLFN
Sbjct: 204 GHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFN 263
Query: 249 AIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFA 308
AIA G +P W IQVM A+ + F+PFD+TK+W +DYPL+ VG + LN+NP NYFA
Sbjct: 264 AIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFA 323
Query: 309 EVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKP-RCPFHSSS 367
EVEQ AF P+N+ PGI SPD+MLQGRLF+Y DTHR+RLG NY IPVN P R +
Sbjct: 324 EVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQ 383
Query: 368 RDGYM-QNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYY 426
RDG M G NY P+S ++ SA + + + F A+D +
Sbjct: 384 RDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNT------ANDDNVT 437
Query: 427 TQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIV--DKQLEHFKKADPKYAEGVKKALE 484
Y L ++++RL + I H+ +I K +++F + P Y ++ L+
Sbjct: 438 QVRAFYVNVLNEEQRKRLCENIA---GHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLD 494
Query: 485 KH 486
K+
Sbjct: 495 KY 496
>pdb|1DGH|C Chain C, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGB|A Chain A, Human Erythrocyte Catalase
pdb|1DGB|B Chain B, Human Erythrocyte Catalase
pdb|1DGB|C Chain C, Human Erythrocyte Catalase
pdb|1DGH|A Chain A, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGB|D Chain D, Human Erythrocyte Catalase
Length = 498
Score = 495 bits (1275), Expect = e-141
Identities = 255/482 (52%), Positives = 327/482 (66%), Gaps = 13/482 (2%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G PV D NVIT GPRGP+L+Q F +++A FDRERIPERVVHAKG+GA+G F V
Sbjct: 25 TTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVHAKGAGAFGYFEV 84
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
T DITKY+KAK+F +GKKT RFSTVAGE GSAD VRDPRGFA+K+YTE+GNWDLVG
Sbjct: 85 THDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVG 144
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPK 188
NNTP+FFIRD I FP FIH+QKR+PQT+L + DMVWDFWS PESL+QV+++ SDRGIP
Sbjct: 145 NNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPD 204
Query: 189 SFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFN 248
RHM+G+GSHTF L+NA GE + KFH+ T QG+K+L+ E+AA + + DPD RDLFN
Sbjct: 205 GHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFN 264
Query: 249 AIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFA 308
AIA G +P W IQVM A+ + F+PFD+TK+W +DYPL+ VG + LN+NP NYFA
Sbjct: 265 AIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFA 324
Query: 309 EVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKP-RCPFHSSS 367
EVEQ AF P+N+ PGI SPD+MLQGRLF+Y DTHR+RLG NY IPVN P R +
Sbjct: 325 EVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQ 384
Query: 368 RDGYM-QNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYY 426
RDG M G NY P+S ++ SA + + + F A+D +
Sbjct: 385 RDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNT------ANDDNVT 438
Query: 427 TQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIV--DKQLEHFKKADPKYAEGVKKALE 484
Y L ++++RL + I H+ +I K +++F + P Y ++ L+
Sbjct: 439 QVRAFYVNVLNEEQRKRLCENIA---GHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLD 495
Query: 485 KH 486
K+
Sbjct: 496 KY 497
>pdb|1DGH|B Chain B, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
pdb|1DGH|D Chain D, Human Erythrocyte Catalase 3-Amino-1,2,4-Triazole Complex
Length = 498
Score = 492 bits (1266), Expect = e-140
Identities = 254/482 (52%), Positives = 326/482 (66%), Gaps = 13/482 (2%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G PV D NVIT GPRGP+L+Q F +++A FDRERIPERVV AKG+GA+G F V
Sbjct: 25 TTGAGNPVGDKLNVITVGPRGPLLVQDVVFTDEMAHFDRERIPERVVXAKGAGAFGYFEV 84
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
T DITKY+KAK+F +GKKT RFSTVAGE GSAD VRDPRGFA+K+YTE+GNWDLVG
Sbjct: 85 THDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTEDGNWDLVG 144
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPK 188
NNTP+FFIRD I FP FIH+QKR+PQT+L + DMVWDFWS PESL+QV+++ SDRGIP
Sbjct: 145 NNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPD 204
Query: 189 SFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFN 248
RHM+G+GSHTF L+NA GE + KFH+ T QG+K+L+ E+AA + + DPD RDLFN
Sbjct: 205 GHRHMNGYGSHTFKLVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQEDPDYGIRDLFN 264
Query: 249 AIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFA 308
AIA G +P W IQVM A+ + F+PFD+TK+W +DYPL+ VG + LN+NP NYFA
Sbjct: 265 AIATGKYPSWTFYIQVMTFNQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFA 324
Query: 309 EVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKP-RCPFHSSS 367
EVEQ AF P+N+ PGI SPD+MLQGRLF+Y DTHR+RLG NY IPVN P R +
Sbjct: 325 EVEQIAFDPSNMPPGIEASPDKMLQGRLFAYPDTHRHRLGPNYLHIPVNCPYRARVANYQ 384
Query: 368 RDGYM-QNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYY 426
RDG M G NY P+S ++ SA + + + F A+D +
Sbjct: 385 RDGPMCMQDNQGGAPNYYPNSFGAPEQQPSALEHSIQYSGEVRRFNT------ANDDNVT 438
Query: 427 TQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIV--DKQLEHFKKADPKYAEGVKKALE 484
Y L ++++RL + I H+ +I K +++F + P Y ++ L+
Sbjct: 439 QVRAFYVNVLNEEQRKRLCENIA---GHLKDAQIFIQKKAVKNFTEVHPDYGSHIQALLD 495
Query: 485 KH 486
K+
Sbjct: 496 KY 497
>pdb|1GWE|A Chain A, Atomic Resolution Structure Of Micrococcus Lysodeikticus
Catalase
pdb|1GWH|A Chain A, Atomic Resolution Structure Of Micrococcus Lysodeikticus
Catalase Complexed With Nadph
Length = 503
Score = 432 bits (1112), Expect = e-122
Identities = 218/478 (45%), Positives = 316/478 (65%), Gaps = 10/478 (2%)
Query: 13 GAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDI 72
GAP D +T G GP++L T LE F+R IPER HAKGSGA+G F VT+D+
Sbjct: 18 GAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFEVTEDV 77
Query: 73 TKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTP 132
+KYTKA +F G KTE RFSTVAGE GS D RD RGFA+++YTEEGN+DLVGNNTP
Sbjct: 78 SKYTKALVFQP-GTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTP 136
Query: 133 VFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRH 192
+FF+RD +KF FI +QKR P + L + M WDFW+N PES +QVT++M RG+P+++R
Sbjct: 137 IFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWRE 196
Query: 193 MDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFNAIAR 252
M+G+GSHT+ +NA+GE+ WVK+HF + QGV +L+N+EA ++ + D +++DLF +IA+
Sbjct: 197 MNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLSNDEATKIAGENADFHRQDLFESIAK 256
Query: 253 GDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQ 312
GD PKW L IQ +P E+ K YRF+PFD+TK +DYP ++VG + LN+NPEN+FA++E
Sbjct: 257 GDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTISQKDYPRIKVGTLTLNRNPENHFAQIES 316
Query: 313 AAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYM 372
AAFSP+N VPGIG SPDRML GR F+Y D YR+G + Q+PVN+P+ H+ + +G M
Sbjct: 317 AAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRPKNAVHNYAFEGQM 376
Query: 373 QNGYYGSLQNYTPSSL-PGYKEDKSARDPKFNL-AHIEKEFEVWNWDYRADDSDYYTQPG 430
+ G Y P+S + ++ D + + +E + RADD D + Q G
Sbjct: 377 WYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQA----LRADDDD-FGQAG 431
Query: 431 DYYRSLPAD-EKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKKALEKHQ 487
R + +D E++ +T+ +L V +++ + E++K D + ++ +++H+
Sbjct: 432 TLVREVFSDQERDDFVETVAGALKGV-RQDVQARAFEYWKNVDATIGQRIEDEVKRHE 488
>pdb|1HBZ|A Chain A, Catalase From Micrococcus Lysodeikticu
Length = 498
Score = 431 bits (1108), Expect = e-122
Identities = 217/478 (45%), Positives = 316/478 (65%), Gaps = 10/478 (2%)
Query: 13 GAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDI 72
GAP D +T G GP++L T LE F+R IPER HAKGSGA+G F VT+D+
Sbjct: 13 GAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRMNIPERRPHAKGSGAFGEFEVTEDV 72
Query: 73 TKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTP 132
+KYTKA +F G KTE RFSTVAGE GS D RD RGFA+++YTEEGN+DLVGNNTP
Sbjct: 73 SKYTKALVFQP-GTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTP 131
Query: 133 VFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRH 192
+FF+RD +KF FI +QKR P + L + M WDFW+N PES +QVT++M RG+P+++R
Sbjct: 132 IFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWRE 191
Query: 193 MDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFNAIAR 252
M+G+GSHT+ +NA+GE+ WVK+HF + QGV +L+N+EA ++ + D +++DLF +IA+
Sbjct: 192 MNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLSNDEATKIAGENADFHRQDLFESIAK 251
Query: 253 GDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQ 312
GD PKW L IQ +P E+ K YRF+PFD+TK +DYP ++VG + LN+NP+N+FA++E
Sbjct: 252 GDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTISQKDYPRIKVGTLTLNRNPKNHFAQIES 311
Query: 313 AAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYM 372
AAFSP+N VPGIG SPDRML GR F+Y D YR+G + Q+PVN+P+ H+ + +G M
Sbjct: 312 AAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRPKNAVHNYAFEGQM 371
Query: 373 QNGYYGSLQNYTPSSL-PGYKEDKSARDPKFNL-AHIEKEFEVWNWDYRADDSDYYTQPG 430
+ G Y P+S + ++ D + + +E + RADD D + Q G
Sbjct: 372 WYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQA----LRADDDD-FGQAG 426
Query: 431 DYYRSLPAD-EKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKKALEKHQ 487
R + +D E++ +T+ +L V +++ + E++K D + ++ +++H+
Sbjct: 427 TLVREVFSDQERDDFVETVAGALKGV-RQDVQARAFEYWKNVDATIGQRIEDEVKRHE 483
>pdb|1GWF|A Chain A, Compound Ii Structure Of Micrococcus Lysodeikticus
Catalase
Length = 503
Score = 425 bits (1093), Expect = e-120
Identities = 215/478 (44%), Positives = 312/478 (64%), Gaps = 10/478 (2%)
Query: 13 GAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDI 72
GAP D +T G GP++L T LE F+R IPER HAKGSGA+G F VT+D+
Sbjct: 18 GAPAVSDRQSLTVGSEGPIVLHDTHLLETHQHFNRXNIPERRPHAKGSGAFGEFEVTEDV 77
Query: 73 TKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTP 132
+KYTKA +F G KTE RFSTVAGE GS D RD RGFA+++YTEEGN+DLVGNNTP
Sbjct: 78 SKYTKALVFQP-GTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTEEGNYDLVGNNTP 136
Query: 133 VFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRH 192
+FF+RD KF FI +QKR P + L + WDFW+N PES +QVT++ RG+P+++R
Sbjct: 137 IFFLRDPXKFTHFIRSQKRLPDSGLRDATXQWDFWTNNPESAHQVTYLXGPRGLPRTWRE 196
Query: 193 MDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFNAIAR 252
M+G+GSHT+ +NA+GE+ WVK+HF + QGV +L+N+EA ++ + D +++DLF +IA+
Sbjct: 197 MNGYGSHTYLWVNAQGEKHWVKYHFISQQGVHNLSNDEATKIAGENADFHRQDLFESIAK 256
Query: 253 GDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQ 312
GD PKW L IQ +P E+ K YRF+PFD+TK +DYP ++VG + LN+NPEN+FA++E
Sbjct: 257 GDHPKWDLYIQAIPYEEGKTYRFNPFDLTKTISQKDYPRIKVGTLTLNRNPENHFAQIES 316
Query: 313 AAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYM 372
AAFSP+N VPGIG SPDRML GR F+Y D YR+G + Q+PVN+P+ H+ + +G
Sbjct: 317 AAFSPSNTVPGIGLSPDRMLLGRAFAYHDAQLYRVGAHVNQLPVNRPKNAVHNYAFEGQX 376
Query: 373 QNGYYGSLQNYTPSSL-PGYKEDKSARDPKFNL-AHIEKEFEVWNWDYRADDSDYYTQPG 430
+ G Y P+S + ++ D + + +E + RADD D + Q G
Sbjct: 377 WYDHTGDRSTYVPNSNGDSWSDETGPVDDGWEADGTLTREAQA----LRADDDD-FGQAG 431
Query: 431 DYYRSLPAD-EKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKKALEKHQ 487
R + +D E++ +T+ +L V +++ + E++K D + ++ +++H+
Sbjct: 432 TLVREVFSDQERDDFVETVAGALKGV-RQDVQARAFEYWKNVDATIGQRIEDEVKRHE 488
>pdb|1M7S|A Chain A, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|B Chain B, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|C Chain C, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
pdb|1M7S|D Chain D, Crystal Structure Analysis Of Catalase Catf Of Pseudomonas
Syringae
Length = 484
Score = 412 bits (1060), Expect = e-116
Identities = 222/481 (46%), Positives = 294/481 (60%), Gaps = 11/481 (2%)
Query: 13 GAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTVTKDI 72
GA V D+ N TAG +GPVLLQ L+KL FDRERIPERVVHA+G+G G FT + DI
Sbjct: 9 GAVVGDNQNSQTAGAQGPVLLQDVQLLQKLQRFDRERIPERVVHARGTGVKGEFTASADI 68
Query: 73 TKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTP 132
+ +KA +F K G+KT F RFS+V S + +RDP GFA K+YT +GNWDLVGNN P
Sbjct: 69 SDLSKATVF-KSGEKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTADGNWDLVGNNFP 127
Query: 133 VFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRH 192
FFIRDAIKFPD +H K DP+TNL N +DF+S+VPE+ +T + S+ G P +R
Sbjct: 128 TFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRF 187
Query: 193 MDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQRDLFNAIAR 252
MDG G H + L+NAKGE +VKFH+ ++QG+K+L +E A+V+ D DL AI +
Sbjct: 188 MDGNGVHAYKLVNAKGEVHYVKFHWKSLQGIKNLDPKEVAQVQSKDYSHLTNDLVGAIKK 247
Query: 253 GDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAEVEQ 312
GDFPKW L +QV+ E+ K+ F P D TKIW D P ++G + LNKN +N+F E EQ
Sbjct: 248 GDFPKWDLYVQVLKPEELAKFDFDPLDATKIW--PDVPEKKIGQMVLNKNVDNFFQETEQ 305
Query: 313 AAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNKPRCPFHSSSRDGYM 372
A +PAN+VPGI S DR+LQGR+FSY DT YRLG N +PVN+P+ ++ ++DG +
Sbjct: 306 VAMAPANLVPGIEPSEDRLLQGRVFSYADTQMYRLGANGLSLPVNQPKVAVNNGNQDGAL 365
Query: 373 QNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDSDYYTQPGDY 432
G+ S NY PS L D AR + L+ ++ ++ + Q GD
Sbjct: 366 NTGHTTSGVNYEPSRLEPRPADDKARYSELPLSGTTQQAKITR-------EQNFKQAGDL 418
Query: 433 YRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKKALEKHQKMMKD 492
YRS A EK L GESLA T E + L + K DP Y V + + +K
Sbjct: 419 YRSYSAKEKTDLVQKFGESLAD-TLTESKNIMLSYLYKEDPNYGTRVAEVAKGDLSKVKS 477
Query: 493 M 493
+
Sbjct: 478 L 478
>pdb|1QF7|A Chain A, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|B Chain B, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|C Chain C, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
pdb|1QF7|D Chain D, Structure Of The Mutant His392gln Of Catalase Hpii From E.
Coli
Length = 753
Score = 391 bits (1004), Expect = e-109
Identities = 213/482 (44%), Positives = 292/482 (60%), Gaps = 7/482 (1%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G + DD N + AG RGP LL+ EK+ FD ERIPER+VHA+GS A+G F
Sbjct: 81 TTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQP 140
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
K ++ TKA S K T F RFSTV G GSAD VRD RGFA K+YTEEG +DLVG
Sbjct: 141 YKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVG 200
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPN----HDMVWDFWSNVPESLYQVTWVMSDR 184
NNTP+FFI+DA KFPDF+H K +P +P HD WD+ S PE+L+ V W MSDR
Sbjct: 201 NNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDR 260
Query: 185 GIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQR 244
GIP+S+R M+GFG HTF LINA+G+ +V+FH+ + G L +EA ++ DPD ++R
Sbjct: 261 GIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRR 320
Query: 245 DLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPE 304
+L+ AI GDFP+++L Q++PEED K+ F D TK+ + P+ VG + LN+NP+
Sbjct: 321 ELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPD 380
Query: 305 NYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRL-GVNYPQIPVNKPRCPF 363
N+FAE EQAAF P ++VPG+ ++ D +LQGRLFSY DT RL G N+ +IP+N+P CP+
Sbjct: 381 NFFAENEQAAFQPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPY 440
Query: 364 HSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDS 423
H+ RDG + G + NY P+S+ ++ PK +E N S
Sbjct: 441 HNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPS 500
Query: 424 --DYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKK 481
+YY+ P ++ S E+ + D L+ V I ++ ++ D A+ V K
Sbjct: 501 FGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAK 560
Query: 482 AL 483
L
Sbjct: 561 NL 562
>pdb|1GGE|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1GGE|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Native Structure At 1.9 A Resolution.
pdb|1IPH|A Chain A, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|B Chain B, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|C Chain C, Structure Of Catalase Hpii From Escherichia Coli
pdb|1IPH|D Chain D, Structure Of Catalase Hpii From Escherichia Coli
Length = 753
Score = 390 bits (1003), Expect = e-109
Identities = 213/482 (44%), Positives = 292/482 (60%), Gaps = 7/482 (1%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G + DD N + AG RGP LL+ EK+ FD ERIPER+VHA+GS A+G F
Sbjct: 81 TTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQP 140
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
K ++ TKA S K T F RFSTV G GSAD VRD RGFA K+YTEEG +DLVG
Sbjct: 141 YKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVG 200
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPN----HDMVWDFWSNVPESLYQVTWVMSDR 184
NNTP+FFI+DA KFPDF+H K +P +P HD WD+ S PE+L+ V W MSDR
Sbjct: 201 NNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDR 260
Query: 185 GIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQR 244
GIP+S+R M+GFG HTF LINA+G+ +V+FH+ + G L +EA ++ DPD ++R
Sbjct: 261 GIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRR 320
Query: 245 DLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPE 304
+L+ AI GDFP+++L Q++PEED K+ F D TK+ + P+ VG + LN+NP+
Sbjct: 321 ELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPD 380
Query: 305 NYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRL-GVNYPQIPVNKPRCPF 363
N+FAE EQAAF P ++VPG+ ++ D +LQGRLFSY DT RL G N+ +IP+N+P CP+
Sbjct: 381 NFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPY 440
Query: 364 HSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDS 423
H+ RDG + G + NY P+S+ ++ PK +E N S
Sbjct: 441 HNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPS 500
Query: 424 --DYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKK 481
+YY+ P ++ S E+ + D L+ V I ++ ++ D A+ V K
Sbjct: 501 FGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAK 560
Query: 482 AL 483
L
Sbjct: 561 NL 562
>pdb|1GGK|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant.
pdb|1GGK|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201his Variant
Length = 753
Score = 389 bits (998), Expect = e-109
Identities = 212/482 (43%), Positives = 292/482 (59%), Gaps = 7/482 (1%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G + DD N + AG RGP LL+ EK+ FD ERIPER+VHA+GS A+G F
Sbjct: 81 TTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQP 140
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
K ++ TKA S K T F RFSTV G GSAD VRD RGFA K+YTEEG +DLVG
Sbjct: 141 YKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVG 200
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPN----HDMVWDFWSNVPESLYQVTWVMSDR 184
+NTP+FFI+DA KFPDF+H K +P +P HD WD+ S PE+L+ V W MSDR
Sbjct: 201 HNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDR 260
Query: 185 GIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQR 244
GIP+S+R M+GFG HTF LINA+G+ +V+FH+ + G L +EA ++ DPD ++R
Sbjct: 261 GIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRR 320
Query: 245 DLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPE 304
+L+ AI GDFP+++L Q++PEED K+ F D TK+ + P+ VG + LN+NP+
Sbjct: 321 ELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPD 380
Query: 305 NYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRL-GVNYPQIPVNKPRCPF 363
N+FAE EQAAF P ++VPG+ ++ D +LQGRLFSY DT RL G N+ +IP+N+P CP+
Sbjct: 381 NFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPY 440
Query: 364 HSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDS 423
H+ RDG + G + NY P+S+ ++ PK +E N S
Sbjct: 441 HNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPS 500
Query: 424 --DYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKK 481
+YY+ P ++ S E+ + D L+ V I ++ ++ D A+ V K
Sbjct: 501 FGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAK 560
Query: 482 AL 483
L
Sbjct: 561 NL 562
>pdb|1CF9|A Chain A, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|B Chain B, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|C Chain C, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
pdb|1CF9|D Chain D, Structure Of The Mutant Val169cys Of Catalase Hpii From
Escherichia Coli
Length = 753
Score = 389 bits (998), Expect = e-109
Identities = 212/482 (43%), Positives = 291/482 (59%), Gaps = 7/482 (1%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G + DD N + AG RGP LL+ EK+ FD ERIPER+VHA+GS A+G F
Sbjct: 81 TTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQP 140
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
K ++ TKA S K T F RFST G GSAD VRD RGFA K+YTEEG +DLVG
Sbjct: 141 YKSLSDITKADFLSDPNKITPVFVRFSTCQGGAGSADTVRDIRGFATKFYTEEGIFDLVG 200
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPN----HDMVWDFWSNVPESLYQVTWVMSDR 184
NNTP+FFI+DA KFPDF+H K +P +P HD WD+ S PE+L+ V W MSDR
Sbjct: 201 NNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDR 260
Query: 185 GIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQR 244
GIP+S+R M+GFG HTF LINA+G+ +V+FH+ + G L +EA ++ DPD ++R
Sbjct: 261 GIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRR 320
Query: 245 DLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPE 304
+L+ AI GDFP+++L Q++PEED K+ F D TK+ + P+ VG + LN+NP+
Sbjct: 321 ELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPD 380
Query: 305 NYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRL-GVNYPQIPVNKPRCPF 363
N+FAE EQAAF P ++VPG+ ++ D +LQGRLFSY DT RL G N+ +IP+N+P CP+
Sbjct: 381 NFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPY 440
Query: 364 HSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDS 423
H+ RDG + G + NY P+S+ ++ PK +E N S
Sbjct: 441 HNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPS 500
Query: 424 --DYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKK 481
+YY+ P ++ S E+ + D L+ V I ++ ++ D A+ V K
Sbjct: 501 FGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAK 560
Query: 482 AL 483
L
Sbjct: 561 NL 562
>pdb|1A4E|A Chain A, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|B Chain B, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|C Chain C, Catalase A From Saccharomyces Cerevisiae
pdb|1A4E|D Chain D, Catalase A From Saccharomyces Cerevisiae
Length = 488
Score = 388 bits (997), Expect = e-109
Identities = 228/503 (45%), Positives = 299/503 (59%), Gaps = 36/503 (7%)
Query: 2 VNKDVKQTTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSG 61
V +D T + G P+ + G GP+LLQ ++ LA F+RE IP+R HA GSG
Sbjct: 2 VREDRVVTNSTGNPINEPFVTQRIGEHGPLLLQDYNLIDSLAHFNRENIPQRNPHAHGSG 61
Query: 62 AYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEE 121
A+G F VT DIT + +FSK+GK+T+C RFSTV G++GSAD VRDPRGFA K+YTEE
Sbjct: 62 AFGYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFATKFYTEE 121
Query: 122 GNWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPE---SLYQVT 178
GN D V NNTPVFFIRD KFP FIHTQKR+PQTNL + DM WDF + PE +++QV
Sbjct: 122 GNLDWVYNNTPVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFLT-TPENQVAIHQVM 180
Query: 179 WVMSDRGIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYD 238
+ SDRG P ++R M G+ HT+ N G+ +V+ H T QG+K+LT EEA ++ +
Sbjct: 181 ILFSDRGTPANYRSMHGYSGHTYKWSNKNGDWHYVQVHIKTDQGIKNLTIEEATKIAGSN 240
Query: 239 PDSNQRDLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVE 298
PD Q+DLF AI G++P W + IQ M E DAKK F FD+TK+W +PL VG +
Sbjct: 241 PDYCQQDLFEAIQNGNYPSWTVYIQTMTERDAKKLPFSVFDLTKVWPQGQFPLRRVGKIV 300
Query: 299 LNKNPENYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRLGVNYPQIPVNK 358
LN+NP N+FA+VEQAAF+P+ VP S D +LQ RLFSY D HRYRLG N+ QIPVN
Sbjct: 301 LNENPLNFFAQVEQAAFAPSTTVPYQEASADPVLQARLFSYADAHRYRLGPNFHQIPVNC 360
Query: 359 PRCP--FHSSSRDGYMQ-NGYYGSLQNY--TPSSLPGYKEDKSARDPKFNLAHIEKEFEV 413
P F+ + RDG M NG +GS Y S ++D+ I++ EV
Sbjct: 361 PYASKFFNPAIRDGPMNVNGNFGSEPTYLANDKSYTYIQQDRP----------IQQHQEV 410
Query: 414 WN-------WDYRADDSDYYTQPGDYYRSL---PADEKERLHDTIGESLAHV--THKEIV 461
WN W D D + Q + YR L P +K ++ IG HV +I
Sbjct: 411 WNGPAIPYHWATSPGDVD-FVQARNLYRVLGKQPGQQKNLAYN-IG---IHVEGACPQIQ 465
Query: 462 DKQLEHFKKADPKYAEGVKKALE 484
+ + F + D +E +KK E
Sbjct: 466 QRVYDMFARVDKGLSEAIKKVAE 488
>pdb|1GG9|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GG9|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128asn Variant.
pdb|1GGF|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide.
pdb|1GGF|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Variant His128asn, Complex With Hydrogen Peroxide
Length = 753
Score = 388 bits (996), Expect = e-109
Identities = 212/482 (43%), Positives = 292/482 (59%), Gaps = 7/482 (1%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G + DD N + AG RGP LL+ EK+ FD ERIPER+V+A+GS A+G F
Sbjct: 81 TTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVNARGSAAHGYFQP 140
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
K ++ TKA S K T F RFSTV G GSAD VRD RGFA K+YTEEG +DLVG
Sbjct: 141 YKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVG 200
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPN----HDMVWDFWSNVPESLYQVTWVMSDR 184
NNTP+FFI+DA KFPDF+H K +P +P HD WD+ S PE+L+ V W MSDR
Sbjct: 201 NNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDR 260
Query: 185 GIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQR 244
GIP+S+R M+GFG HTF LINA+G+ +V+FH+ + G L +EA ++ DPD ++R
Sbjct: 261 GIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRR 320
Query: 245 DLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPE 304
+L+ AI GDFP+++L Q++PEED K+ F D TK+ + P+ VG + LN+NP+
Sbjct: 321 ELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPD 380
Query: 305 NYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRL-GVNYPQIPVNKPRCPF 363
N+FAE EQAAF P ++VPG+ ++ D +LQGRLFSY DT RL G N+ +IP+N+P CP+
Sbjct: 381 NFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPY 440
Query: 364 HSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDS 423
H+ RDG + G + NY P+S+ ++ PK +E N S
Sbjct: 441 HNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPS 500
Query: 424 --DYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKK 481
+YY+ P ++ S E+ + D L+ V I ++ ++ D A+ V K
Sbjct: 501 FGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAK 560
Query: 482 AL 483
L
Sbjct: 561 NL 562
>pdb|1GGJ|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant.
pdb|1GGJ|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
Asn201ala Variant
Length = 753
Score = 387 bits (995), Expect = e-108
Identities = 212/482 (43%), Positives = 291/482 (59%), Gaps = 7/482 (1%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G + DD N + AG RGP LL+ EK+ FD ERIPER+VHA+GS A+G F
Sbjct: 81 TTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVHARGSAAHGYFQP 140
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
K ++ TKA S K T F RFSTV G GSAD VRD RGFA K+YTEEG +DLVG
Sbjct: 141 YKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVG 200
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPN----HDMVWDFWSNVPESLYQVTWVMSDR 184
NTP+FFI+DA KFPDF+H K +P +P HD WD+ S PE+L+ V W MSDR
Sbjct: 201 ANTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDR 260
Query: 185 GIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQR 244
GIP+S+R M+GFG HTF LINA+G+ +V+FH+ + G L +EA ++ DPD ++R
Sbjct: 261 GIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRR 320
Query: 245 DLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPE 304
+L+ AI GDFP+++L Q++PEED K+ F D TK+ + P+ VG + LN+NP+
Sbjct: 321 ELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPD 380
Query: 305 NYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRL-GVNYPQIPVNKPRCPF 363
N+FAE EQAAF P ++VPG+ ++ D +LQGRLFSY DT RL G N+ +IP+N+P CP+
Sbjct: 381 NFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPY 440
Query: 364 HSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDS 423
H+ RDG + G + NY P+S+ ++ PK +E N S
Sbjct: 441 HNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPS 500
Query: 424 --DYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKK 481
+YY+ P ++ S E+ + D L+ V I ++ ++ D A+ V K
Sbjct: 501 FGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAK 560
Query: 482 AL 483
L
Sbjct: 561 NL 562
>pdb|1GGH|A Chain A, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|B Chain B, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|C Chain C, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant.
pdb|1GGH|D Chain D, Crystal Structure Of Catalase Hpii From Escherichia Coli,
His128ala Variant
Length = 753
Score = 387 bits (993), Expect = e-108
Identities = 212/482 (43%), Positives = 291/482 (59%), Gaps = 7/482 (1%)
Query: 9 TTAFGAPVWDDNNVITAGPRGPVLLQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV 68
TT G + DD N + AG RGP LL+ EK+ FD ERIPER+V A+GS A+G F
Sbjct: 81 TTNQGVRIADDQNSLRAGSRGPTLLEDFILREKITHFDHERIPERIVAARGSAAHGYFQP 140
Query: 69 TKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVG 128
K ++ TKA S K T F RFSTV G GSAD VRD RGFA K+YTEEG +DLVG
Sbjct: 141 YKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTEEGIFDLVG 200
Query: 129 NNTPVFFIRDAIKFPDFIHTQKRDPQTNLPN----HDMVWDFWSNVPESLYQVTWVMSDR 184
NNTP+FFI+DA KFPDF+H K +P +P HD WD+ S PE+L+ V W MSDR
Sbjct: 201 NNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDR 260
Query: 185 GIPKSFRHMDGFGSHTFSLINAKGERFWVKFHFHTMQGVKHLTNEEAAEVRKYDPDSNQR 244
GIP+S+R M+GFG HTF LINA+G+ +V+FH+ + G L +EA ++ DPD ++R
Sbjct: 261 GIPRSYRTMEGFGIHTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTGRDPDFHRR 320
Query: 245 DLFNAIARGDFPKWKLSIQVMPEEDAKKYRFHPFDVTKIWYLQDYPLMEVGIVELNKNPE 304
+L+ AI GDFP+++L Q++PEED K+ F D TK+ + P+ VG + LN+NP+
Sbjct: 321 ELWEAIEAGDFPEYELGFQLIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPD 380
Query: 305 NYFAEVEQAAFSPANVVPGIGYSPDRMLQGRLFSYGDTHRYRL-GVNYPQIPVNKPRCPF 363
N+FAE EQAAF P ++VPG+ ++ D +LQGRLFSY DT RL G N+ +IP+N+P CP+
Sbjct: 381 NFFAENEQAAFHPGHIVPGLDFTNDPLLQGRLFSYTDTQISRLGGPNFHEIPINRPTCPY 440
Query: 364 HSSSRDGYMQNGYYGSLQNYTPSSLPGYKEDKSARDPKFNLAHIEKEFEVWNWDYRADDS 423
H+ RDG + G + NY P+S+ ++ PK +E N S
Sbjct: 441 HNFQRDGMHRMGIDTNPANYEPNSINDNWPRETPPGPKRGGFESYQERVEGNKVRERSPS 500
Query: 424 --DYYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLEHFKKADPKYAEGVKK 481
+YY+ P ++ S E+ + D L+ V I ++ ++ D A+ V K
Sbjct: 501 FGEYYSHPRLFWLSQTPFEQRHIVDGFSFELSKVVRPYIRERVVDQLAHIDLTLAQAVAK 560
Query: 482 AL 483
L
Sbjct: 561 NL 562
>pdb|1EKM|A Chain A, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted
Copper Amine Oxidase Of Hansenula Polymorpha Expressed
In Escherichia Coli
pdb|1EKM|B Chain B, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted
Copper Amine Oxidase Of Hansenula Polymorpha Expressed
In Escherichia Coli
pdb|1EKM|C Chain C, Crystal Structure At 2.5 A Resolution Of Zinc-Substituted
Copper Amine Oxidase Of Hansenula Polymorpha Expressed
In Escherichia Coli
Length = 656
Score = 28.1 bits (61), Expect = 2.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 275 FHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAE 309
FH F +T +D+PLM + L P ++F E
Sbjct: 601 FHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTE 635
>pdb|1A2V|A Chain A, Copper Amine Oxidase From Hansenula Polymorpha
pdb|1A2V|B Chain B, Copper Amine Oxidase From Hansenula Polymorpha
pdb|1A2V|C Chain C, Copper Amine Oxidase From Hansenula Polymorpha
pdb|1A2V|D Chain D, Copper Amine Oxidase From Hansenula Polymorpha
pdb|1A2V|E Chain E, Copper Amine Oxidase From Hansenula Polymorpha
pdb|1A2V|F Chain F, Copper Amine Oxidase From Hansenula Polymorpha
Length = 655
Score = 28.1 bits (61), Expect = 2.4
Identities = 12/35 (34%), Positives = 18/35 (51%)
Query: 275 FHPFDVTKIWYLQDYPLMEVGIVELNKNPENYFAE 309
FH F +T +D+PLM + L P ++F E
Sbjct: 600 FHTFGITHFPAPEDFPLMPAEPITLMLRPRHFFTE 634
>pdb|1JGC|A Chain A, The 2.6 A Structure Resolution Of Rhodobacter Capsulatus
Bacterioferritin With Metal-Free Dinuclear Site And Heme
Iron In A Crystallographic Special Position
pdb|1JGC|B Chain B, The 2.6 A Structure Resolution Of Rhodobacter Capsulatus
Bacterioferritin With Metal-Free Dinuclear Site And Heme
Iron In A Crystallographic Special Position
pdb|1JGC|C Chain C, The 2.6 A Structure Resolution Of Rhodobacter Capsulatus
Bacterioferritin With Metal-Free Dinuclear Site And Heme
Iron In A Crystallographic Special Position
Length = 161
Score = 27.3 bits (59), Expect = 4.1
Identities = 34/118 (28%), Positives = 45/118 (37%), Gaps = 12/118 (10%)
Query: 33 LQSTWFLEKLAAFDRERIPERVVHAKGSGAYGTFTV-TKDITKYTKAKIFSKVGKKTECF 91
LQ W L K+A RE E + HA A F ++ K +I + EC
Sbjct: 31 LQEDWGLAKMAKKSREESIEEMGHADKIIARILFLEGHPNLQKLDPLRIGEGPRETLEC- 89
Query: 92 FRFSTVAGERGSADAVRDPRGFAMKYYTEEGNWDLVGNNTPVFFIRDAIKFPDFIHTQ 149
+AGE + R+ R Y E G D+V N I D DF+ TQ
Sbjct: 90 ----DLAGEHDALKLYREAR----DYCAEVG--DIVSKNIFESLITDEEGHVDFLETQ 137
>pdb|1IVU|A Chain A, Crystal Structure Of Copper Amine Oxidase From
Arthrobacter Globiformis: Initial Intermediate In
Topaquinone Biogenesis
pdb|1IVU|B Chain B, Crystal Structure Of Copper Amine Oxidase From
Arthrobacter Globiformis: Initial Intermediate In
Topaquinone Biogenesis
pdb|1AVK| Crystal Structures Of The Copper-Containing Amine Oxidase From
Arthrobacter Globiformis In The Holo- And Apo-Forms:
Implications For The Biogenesis Of Topa Quinone
Length = 638
Score = 27.3 bits (59), Expect = 4.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 275 FHPFDVTKIWYLQDYPLMEVGIVELNKNPENYF 307
+H F +T ++D+P+M V V PE +F
Sbjct: 585 WHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFF 617
>pdb|1IVV|A Chain A, Crystal Structure Of Copper Amine Oxidase From
Arthrobacter Globiformis: Early Intermediate In
Topaquinone Biogenesis
pdb|1IVV|B Chain B, Crystal Structure Of Copper Amine Oxidase From
Arthrobacter Globiformis: Early Intermediate In
Topaquinone Biogenesis
pdb|1IVW|A Chain A, Crystal Structure Of Copper Amine Oxidase From
Arthrobacter Globiformis: Late Intermediate In
Topaquinone Biogenesis
pdb|1IVW|B Chain B, Crystal Structure Of Copper Amine Oxidase From
Arthrobacter Globiformis: Late Intermediate In
Topaquinone Biogenesis
pdb|1IVX|A Chain A, Crystal Structure Of Copper Amine Oxidase From
Arthrobacter Globiformis: Holo Form Generated By
Biogenesis In Crystal.
pdb|1IVX|B Chain B, Crystal Structure Of Copper Amine Oxidase From
Arthrobacter Globiformis: Holo Form Generated By
Biogenesis In Crystal.
pdb|1AV4| Crystal Structures Of The Copper-Containing Amine Oxidase From
Arthrobacter Globiformis In The Holo- And Apo-Forms:
Implications For The Biogenesis Of Topa Quinone
pdb|1AVL| Crystal Structures Of The Copper-Containing Amine Oxidase From
Arthrobacter Globiformis In The Holo- And Apo-Forms:
Implications For The Biogenesis Of Topa Quinone
Length = 638
Score = 27.3 bits (59), Expect = 4.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 275 FHPFDVTKIWYLQDYPLMEVGIVELNKNPENYF 307
+H F +T ++D+P+M V V PE +F
Sbjct: 585 WHTFGLTHFPRVEDWPIMPVDTVGFKLRPEGFF 617
>pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat, Nmr,
20 Structures
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
Length = 92
Score = 26.6 bits (57), Expect = 7.0
Identities = 11/42 (26%), Positives = 24/42 (56%)
Query: 425 YYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLE 466
Y + GD ++ ++ KE +++ + L + +E+VDK +E
Sbjct: 18 YSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME 59
>pdb|1MHO| The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 26.6 bits (57), Expect = 7.0
Identities = 11/42 (26%), Positives = 24/42 (56%)
Query: 425 YYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLE 466
Y + GD ++ ++ KE +++ + L + +E+VDK +E
Sbjct: 17 YSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME 58
>pdb|1ICU|B Chain B, The Structure Of Escherichia Coli Nitroreductase Complexed
With Nicotinic Acid
pdb|1ICU|D Chain D, The Structure Of Escherichia Coli Nitroreductase Complexed
With Nicotinic Acid
pdb|1DS7|A Chain A, A Minor Fmn-Dependent Nitroreductase From Escherichia Coli
B
pdb|1ICR|A Chain A, The Structure Of Escherichia Coli Nitroreductase Complexed
With Nicotinic Acid
pdb|1ICR|B Chain B, The Structure Of Escherichia Coli Nitroreductase Complexed
With Nicotinic Acid
pdb|1ICU|A Chain A, The Structure Of Escherichia Coli Nitroreductase Complexed
With Nicotinic Acid
pdb|1ICU|C Chain C, The Structure Of Escherichia Coli Nitroreductase Complexed
With Nicotinic Acid
Length = 217
Score = 26.6 bits (57), Expect = 7.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 458 KEIVDKQLEHFKKADPKYAEGVKKALEKHQKMMKDMHGKDMH 499
K +VD++ + A P+ K A +K +K DMH KD+H
Sbjct: 96 KLVVDQEDADGRFATPE----AKAANDKGRKFFADMHRKDLH 133
>pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
Length = 92
Score = 26.6 bits (57), Expect = 7.0
Identities = 11/42 (26%), Positives = 24/42 (56%)
Query: 425 YYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLE 466
Y + GD ++ ++ KE +++ + L + +E+VDK +E
Sbjct: 18 YSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME 59
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
Length = 92
Score = 26.6 bits (57), Expect = 7.0
Identities = 11/42 (26%), Positives = 24/42 (56%)
Query: 425 YYTQPGDYYRSLPADEKERLHDTIGESLAHVTHKEIVDKQLE 466
Y + GD ++ ++ KE +++ + L + +E+VDK +E
Sbjct: 18 YSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVME 59
>pdb|1DS7|B Chain B, A Minor Fmn-Dependent Nitroreductase From Escherichia Coli
B
Length = 217
Score = 26.6 bits (57), Expect = 7.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 458 KEIVDKQLEHFKKADPKYAEGVKKALEKHQKMMKDMHGKDMH 499
K +VD++ + A P+ K A +K +K DMH KD+H
Sbjct: 96 KLVVDQEDADGRFATPE----AKAANDKGRKFFADMHRKDLH 133
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.318 0.136 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,490,867
Number of Sequences: 13198
Number of extensions: 165304
Number of successful extensions: 473
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 413
Number of HSP's gapped (non-prelim): 30
length of query: 505
length of database: 2,899,336
effective HSP length: 92
effective length of query: 413
effective length of database: 1,685,120
effective search space: 695954560
effective search space used: 695954560
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)