BLASTP 2.2.1 [Apr-13-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15644725|ref|NP_206895.1| hypothetical protein
[Helicobacter pylori 26695]
         (176 letters)

Database: /var/www/html/HP/blast_new/blast/db/pdbaa
           13,198 sequences; 2,899,336 total letters

Searching...........................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pdb|1OXY|    Hemocyanin Subunit Ii Complexed With Oxygen           32  0.053
pdb|1NOL|    Oxygenated Hemocyanin (Subunit Type Ii) >gi|494...    31  0.091
pdb|1LL1|    Hydroxo Bridge Met Form Hemocyanin From Limulus       31  0.091
pdb|3PJR|A  Chain A, Helicase Substrate Complex >gi|2781090|...    30  0.20
pdb|2PJR|F  Chain F, Helicase Product Complex >gi|9257172|pd...    30  0.20
pdb|1JSD|B  Chain B, Crystal Structure Of Swine H9 Haemagglu...    29  0.35
pdb|1QHH|B  Chain B, Structure Of Dna Helicase With Adpnp          28  0.77
pdb|1BCF|A  Chain A, Bacterioferritin (Cytochrome B1) >gi|80...    28  0.77
pdb|1A8D|    Tetanus Toxin C Fragment >gi|3212428|pdb|1AF9| ...    27  1.3
pdb|1DLL|A  Chain A, The Hc Fragement Of Tetanus Toxin Compl...    27  1.3
pdb|1FV3|A  Chain A, The Hc Fragment Of Tetanus Toxin Comple...    27  1.3
pdb|1D0H|A  Chain A, The Hc Fragment Of Tetanus Toxin Comple...    27  1.3
pdb|1RPO|    Rop (Cole1 Repressor Of Primer) Mutant With Ala...    27  1.3
pdb|1DFQ|A  Chain A, The Hc Fragment Of Tetanus Toxin Comple...    27  1.3
pdb|1DIW|A  Chain A, The Hc Fragment Of Tetanus Toxin Comple...    27  1.3
pdb|6CSC|A  Chain A, Chicken Citrate Synthase Complex With T...    25  3.8
pdb|1CSH|    Citrate Synthase (E.C.4.1.3.7) Complexed With O...    25  3.8
pdb|1CTS|    Citrate Synthase (E.C.4.1.3.7) - Citrate Comple...    25  5.0
pdb|1I4N|A  Chain A, Crystal Structure Of Indoleglycerol Pho...    25  5.0
pdb|1J5T|A  Chain A, Crystal Structure Of Indole-3-Glycerol ...    25  5.0
pdb|2CTS|    Citrate Synthase (E.C.4.1.3.7) - (CoA, Citrate)...    25  5.0
pdb|1REP|C  Chain C, Crystal Structure Of Replication Initia...    24  8.5
>pdb|1OXY|   Hemocyanin Subunit Ii Complexed With Oxygen
          Length = 628

 Score = 31.6 bits (70), Expect = 0.053
 Identities = 21/73 (28%), Positives = 39/73 (52%), Gaps = 10/73 (13%)

Query: 86  LVNEYCTNEELFDKESVKISDLLIQDIQLYALVDEM----LKEDKYQVQHTILKG---II 138
           + +EY    + +D + +   D+ +QD+ L+A VD +    ++E + +++H I  G    I
Sbjct: 370 IFHEYKNTLKPYDHDVLNFPDIQVQDVTLHARVDNVVHTFMREQELELKHGINPGNARSI 429

Query: 139 KRKYDEAYSLNSE 151
           K KY   Y L+ E
Sbjct: 430 KAKY---YHLDHE 439
>pdb|1NOL|   Oxygenated Hemocyanin (Subunit Type Ii)
 pdb|1LLA|   Hemocyanin (Subunit Type Ii)
          Length = 628

 Score = 30.8 bits (68), Expect = 0.091
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 86  LVNEYCTNEELFDKESVKISDLLIQDIQLYALVDEM----LKEDKYQVQHTILKGIIKRK 141
           + +EY    + +D + +   D+ +QD+ L+A VD +    ++E + +++H I  G  +  
Sbjct: 370 IFHEYKNTLKPYDHDVLNFPDIQVQDVTLHARVDNVVHTFMREQELELKHGINPGNARSI 429

Query: 142 YDEAYSLNSE 151
               Y L+ E
Sbjct: 430 KARYYHLDHE 439
>pdb|1LL1|   Hydroxo Bridge Met Form Hemocyanin From Limulus
          Length = 590

 Score = 30.8 bits (68), Expect = 0.091
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 4/70 (5%)

Query: 86  LVNEYCTNEELFDKESVKISDLLIQDIQLYALVDEM----LKEDKYQVQHTILKGIIKRK 141
           + +EY    + +D + +   D+ +QD+ L+A VD +    ++E + +++H I  G  +  
Sbjct: 346 IFHEYKNTLKPYDHDVLNFPDIQVQDVTLHARVDNVVHTFMREQELELKHGINPGNARSI 405

Query: 142 YDEAYSLNSE 151
               Y L+ E
Sbjct: 406 KARYYHLDHE 415
>pdb|3PJR|A Chain A, Helicase Substrate Complex
 pdb|1PJR|   Structure Of Dna Helicase
 pdb|1QHG|A Chain A, Structure Of Dna Helicase Mutant With Adpnp
          Length = 724

 Score = 29.6 bits (65), Expect = 0.20
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 15/90 (16%)

Query: 44  SILALASKASEDL--EEQLKKIKDYIYRTLNAKIASDVYNRVLILVNEYCTNEELFDKES 101
           +IL   S A  +L   EQ  K     Y     K+ SDVY        EY   + L    S
Sbjct: 143 TILGTISAAKNELLPPEQFAKRASTYYE----KVVSDVYQ-------EY--QQRLLRNHS 189

Query: 102 VKISDLLIQDIQLYALVDEMLKEDKYQVQH 131
           +   DL++  IQL+  V ++L   +Y+ Q+
Sbjct: 190 LDFDDLIMTTIQLFDRVPDVLHYYQYKFQY 219
>pdb|2PJR|F Chain F, Helicase Product Complex
 pdb|2PJR|A Chain A, Helicase Product Complex
          Length = 548

 Score = 29.6 bits (65), Expect = 0.20
 Identities = 27/90 (30%), Positives = 40/90 (44%), Gaps = 15/90 (16%)

Query: 44  SILALASKASEDL--EEQLKKIKDYIYRTLNAKIASDVYNRVLILVNEYCTNEELFDKES 101
           +IL   S A  +L   EQ  K     Y     K+ SDVY        EY   + L    S
Sbjct: 143 TILGTISAAKNELLPPEQFAKRASTYYE----KVVSDVYQ-------EY--QQRLLRNHS 189

Query: 102 VKISDLLIQDIQLYALVDEMLKEDKYQVQH 131
           +   DL++  IQL+  V ++L   +Y+ Q+
Sbjct: 190 LDFDDLIMTTIQLFDRVPDVLHYYQYKFQY 219
>pdb|1JSD|B Chain B, Crystal Structure Of Swine H9 Haemagglutinin
 pdb|1JSI|B Chain B, Crystal Structure Of H9 Haemagglutinin Bound To Lstc
           Receptor Analog
 pdb|1JSH|B Chain B, Crystal Structure Of H9 Haemagglutinin Complexed With Lsta
           Receptor Analog
          Length = 176

 Score = 28.9 bits (63), Expect = 0.35
 Identities = 16/74 (21%), Positives = 40/74 (53%), Gaps = 2/74 (2%)

Query: 92  TNEELFDKESVKISDLLIQDIQLYALVDEMLKEDKYQVQHTILKGIIKRKYDEAYSLNSE 151
           + ++  DK + K+++++ +  + Y ++D    E   + +  ++   I  +  + ++ N+E
Sbjct: 40  STQKAIDKITSKVNNIVDKMNKQYGIIDHEFSE--IETRLNMINNKIDDQIQDIWTYNAE 97

Query: 152 DRILLEYQERLLEH 165
             +LLE Q+ L EH
Sbjct: 98  LLVLLENQKTLDEH 111
>pdb|1QHH|B Chain B, Structure Of Dna Helicase With Adpnp
          Length = 273

 Score = 27.7 bits (60), Expect = 0.77
 Identities = 18/58 (31%), Positives = 29/58 (49%), Gaps = 9/58 (15%)

Query: 74  KIASDVYNRVLILVNEYCTNEELFDKESVKISDLLIQDIQLYALVDEMLKEDKYQVQH 131
           K+ SDVY        EY   + L    S+   DL++  IQL+  V ++L   +Y+ Q+
Sbjct: 4   KVVSDVYQ-------EY--QQRLLRNHSLDFDDLIMTTIQLFDRVPDVLHYYQYKFQY 52
>pdb|1BCF|A Chain A, Bacterioferritin (Cytochrome B1)
 pdb|1BCF|B Chain B, Bacterioferritin (Cytochrome B1)
 pdb|1BFR|A Chain A, Iron Storage And Electron Transport
 pdb|1BFR|B Chain B, Iron Storage And Electron Transport
 pdb|1BFR|C Chain C, Iron Storage And Electron Transport
 pdb|1BFR|D Chain D, Iron Storage And Electron Transport
 pdb|1BFR|E Chain E, Iron Storage And Electron Transport
 pdb|1BFR|F Chain F, Iron Storage And Electron Transport
 pdb|1BFR|G Chain G, Iron Storage And Electron Transport
 pdb|1BFR|H Chain H, Iron Storage And Electron Transport
 pdb|1BFR|I Chain I, Iron Storage And Electron Transport
 pdb|1BFR|J Chain J, Iron Storage And Electron Transport
 pdb|1BFR|K Chain K, Iron Storage And Electron Transport
 pdb|1BFR|L Chain L, Iron Storage And Electron Transport
 pdb|1BFR|M Chain M, Iron Storage And Electron Transport
 pdb|1BFR|N Chain N, Iron Storage And Electron Transport
 pdb|1BFR|O Chain O, Iron Storage And Electron Transport
 pdb|1BFR|P Chain P, Iron Storage And Electron Transport
 pdb|1BFR|Q Chain Q, Iron Storage And Electron Transport
 pdb|1BFR|R Chain R, Iron Storage And Electron Transport
 pdb|1BFR|S Chain S, Iron Storage And Electron Transport
 pdb|1BFR|T Chain T, Iron Storage And Electron Transport
 pdb|1BFR|U Chain U, Iron Storage And Electron Transport
 pdb|1BFR|V Chain V, Iron Storage And Electron Transport
 pdb|1BFR|W Chain W, Iron Storage And Electron Transport
 pdb|1BFR|X Chain X, Iron Storage And Electron Transport
          Length = 158

 Score = 27.7 bits (60), Expect = 0.77
 Identities = 13/54 (24%), Positives = 28/54 (51%), Gaps = 4/54 (7%)

Query: 84  LILVNEYCTNEELFDKESVKISDLLIQDIQLYALVDEMLKEDKYQVQHTILKGI 137
           L+ +N+Y  +  +F    +K     + D++ +  +DEM   D+Y  +   L+G+
Sbjct: 19  LVAINQYFLHARMFKNWGLK----RLNDVEYHESIDEMKHADRYIERILFLEGL 68
>pdb|1A8D|   Tetanus Toxin C Fragment
 pdb|1AF9|   Tetanus Neurotoxin C Fragment
          Length = 452

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 52  ASEDLEEQLKKIKDYIYRT-----LNAKI---ASDVYNRVLILVNEYCTNEEL 96
           AS   + QLK I DY+Y T      N K+      +YN +  ++  Y  N E+
Sbjct: 271 ASSSKDVQLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEI 323
>pdb|1DLL|A Chain A, The Hc Fragement Of Tetanus Toxin Complexed With Lactose
          Length = 441

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 52  ASEDLEEQLKKIKDYIYRT-----LNAKI---ASDVYNRVLILVNEYCTNEEL 96
           AS   + QLK I DY+Y T      N K+      +YN +  ++  Y  N E+
Sbjct: 260 ASSSKDVQLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEI 312
>pdb|1FV3|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With An
           Analogue Of Its Ganglioside Receptor Gt1b
 pdb|1FV3|B Chain B, The Hc Fragment Of Tetanus Toxin Complexed With An
           Analogue Of Its Ganglioside Receptor Gt1b
 pdb|1FV2|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With An
           Analogue Of Its Ganglioside Receptor Gt1b
          Length = 472

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 52  ASEDLEEQLKKIKDYIYRT-----LNAKI---ASDVYNRVLILVNEYCTNEEL 96
           AS   + QLK I DY+Y T      N K+      +YN +  ++  Y  N E+
Sbjct: 291 ASSSKDVQLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEI 343
>pdb|1D0H|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With N-Acetyl-
           Galactosamine
          Length = 469

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 52  ASEDLEEQLKKIKDYIYRT-----LNAKI---ASDVYNRVLILVNEYCTNEEL 96
           AS   + QLK I DY+Y T      N K+      +YN +  ++  Y  N E+
Sbjct: 288 ASSSKDVQLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEI 340
>pdb|1RPO|   Rop (Cole1 Repressor Of Primer) Mutant With Ala Inserted On
          Either Side Of Asp 31 (Ins (A-D31-A))
 pdb|1NKD|   Atomic Resolution (1.07 Angstroms) Structure Of The Rop Mutant
          <2aa>
          Length = 65

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 16/52 (30%), Positives = 27/52 (51%)

Query: 30 RSLSHKMMTLIQILSILALASKASEDLEEQLKKIKDYIYRTLNAKIASDVYN 81
          R +  + +TL++ L+ LA A+    D+ E L    D +YR+  A+   D  N
Sbjct: 13 RFIRSQTLTLLEKLNELADAADEQADICESLHDHADELYRSCLARFGDDGEN 64
>pdb|1DFQ|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With Sialic
           Acid
          Length = 444

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 52  ASEDLEEQLKKIKDYIYRT-----LNAKI---ASDVYNRVLILVNEYCTNEEL 96
           AS   + QLK I DY+Y T      N K+      +YN +  ++  Y  N E+
Sbjct: 263 ASSSKDVQLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEI 315
>pdb|1DIW|A Chain A, The Hc Fragment Of Tetanus Toxin Complexed With Galactose
          Length = 441

 Score = 26.9 bits (58), Expect = 1.3
 Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 8/53 (15%)

Query: 52  ASEDLEEQLKKIKDYIYRT-----LNAKI---ASDVYNRVLILVNEYCTNEEL 96
           AS   + QLK I DY+Y T      N K+      +YN +  ++  Y  N E+
Sbjct: 260 ASSSKDVQLKNITDYMYLTNAPSYTNGKLNIYYRRLYNGLKFIIKRYTPNNEI 312
>pdb|6CSC|A Chain A, Chicken Citrate Synthase Complex With
           Trifluoroacetonyl-Coa And Citrate
 pdb|1AL6|   Chicken Citrate Synthase Complex With N-Hydroxyamido-Coa And
           Oxaloacetate
 pdb|6CSC|B Chain B, Chicken Citrate Synthase Complex With
           Trifluoroacetonyl-Coa And Citrate
          Length = 437

 Score = 25.4 bits (54), Expect = 3.8
 Identities = 21/83 (25%), Positives = 40/83 (47%), Gaps = 3/83 (3%)

Query: 45  ILALASKASEDL--EEQLKKIKDYIYRTLNA-KIASDVYNRVLILVNEYCTNEELFDKES 101
           +L   S+  +DL  +   +K++DYI+ TLN+ ++     + VL   +   T +  F  + 
Sbjct: 281 VLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKH 340

Query: 102 VKISDLLIQDIQLYALVDEMLKE 124
           +    +     QLY +V  +L E
Sbjct: 341 LPSDPMFKLVAQLYKIVPNVLLE 363
>pdb|1CSH|   Citrate Synthase (E.C.4.1.3.7) Complexed With Oxaloacetate And
           Amidocarboxymethyldethia Coenzyme A
 pdb|1CSI|   Citrate Synthase (E.C.4.1.3.7) Complexed With Oxaloacetate And
           Carboxymethyldethia Coenzyme A
 pdb|1CSR|   Mol_id: 1; Molecule: Citrate Synthase; Chain: Null; Ec: 4.1.3.7;
           Heterogen: Oxaloacetate; Heterogen:
           Alpha-Fluoro-Amidocarboxymethyldethia Coenzyme A
 pdb|1CSS|   Mol_id: 1; Molecule: Citrate Synthase; Chain: Null; Ec: 4.1.3.7;
           Heterogen: Oxaloacetate; Heterogen:
           Alpha-Fluoro-Carboxymethyldethia Coenzyme A
 pdb|1AMZ|   Chicken Citrate Synthase Complex With Nitromethylde-Coa And Malate
          Length = 435

 Score = 25.4 bits (54), Expect = 3.8
 Identities = 21/83 (25%), Positives = 40/83 (47%), Gaps = 3/83 (3%)

Query: 45  ILALASKASEDL--EEQLKKIKDYIYRTLNA-KIASDVYNRVLILVNEYCTNEELFDKES 101
           +L   S+  +DL  +   +K++DYI+ TLN+ ++     + VL   +   T +  F  + 
Sbjct: 279 VLLWLSQLQKDLGADASDEKLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKH 338

Query: 102 VKISDLLIQDIQLYALVDEMLKE 124
           +    +     QLY +V  +L E
Sbjct: 339 LPSDPMFKLVAQLYKIVPNVLLE 361
>pdb|1CTS|   Citrate Synthase (E.C.4.1.3.7) - Citrate Complex
 pdb|4CTS|A Chain A, Citrate Synthase (E.C.4.1.3.7) - Oxaloacetate Complex
 pdb|4CTS|B Chain B, Citrate Synthase (E.C.4.1.3.7) - Oxaloacetate Complex
          Length = 437

 Score = 25.0 bits (53), Expect = 5.0
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 48  LASKASEDLEEQLKKIKDYIYRTLNA-KIASDVYNRVLILVNEYCTNEELFDKESVKISD 106
           L  +  +D+ ++  K++DYI+ TLN+ ++     + VL   +   T +  F  + +    
Sbjct: 288 LQKEVGKDVSDE--KLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPHDP 345

Query: 107 LLIQDIQLYALVDEMLKE 124
           +     QLY +V  +L E
Sbjct: 346 MFKLVAQLYKIVPNVLLE 363
>pdb|1I4N|A Chain A, Crystal Structure Of Indoleglycerol Phosphate Synthase
           From Thermotoga Maritima
 pdb|1I4N|B Chain B, Crystal Structure Of Indoleglycerol Phosphate Synthase
           From Thermotoga Maritima
          Length = 251

 Score = 25.0 bits (53), Expect = 5.0
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 14/100 (14%)

Query: 64  KDYIYRTLNAKIASDVYNRVLILVNEYCTNEELFDKESVKISDLLIQDIQLYALVDEMLK 123
           KD+   T+  K+AS V    ++++    T E++  KE  + ++ L  D    +LV+   +
Sbjct: 107 KDFYIDTVQVKLASSVGADAILIIARILTAEQI--KEIYEAAEELGMD----SLVEVHSR 160

Query: 124 EDKYQVQHTILKGIIKRKYDEAYSLNSEDRILLEYQERLL 163
           ED  +V   I   II         +N+ D    E ++ +L
Sbjct: 161 EDLEKVFSVIRPKII--------GINTRDLDTFEIKKNVL 192
>pdb|1J5T|A Chain A, Crystal Structure Of Indole-3-Glycerol Phosphate Synthase
           (Tm0140) From Thermotoga Maritima At 3.0 A Resolution
          Length = 242

 Score = 25.0 bits (53), Expect = 5.0
 Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 14/100 (14%)

Query: 64  KDYIYRTLNAKIASDVYNRVLILVNEYCTNEELFDKESVKISDLLIQDIQLYALVDEMLK 123
           KD+   T+  K+AS V    ++++    T E++  KE  + ++ L  D    +LV+   +
Sbjct: 98  KDFYIDTVQVKLASSVGADAILIIARILTAEQI--KEIYEAAEELGMD----SLVEVHSR 151

Query: 124 EDKYQVQHTILKGIIKRKYDEAYSLNSEDRILLEYQERLL 163
           ED  +V   I   II         +N+ D    E ++ +L
Sbjct: 152 EDLEKVFSVIRPKII--------GINTRDLDTFEIKKNVL 183
>pdb|2CTS|   Citrate Synthase (E.C.4.1.3.7) - (CoA, Citrate) Complex
          Length = 437

 Score = 25.0 bits (53), Expect = 5.0
 Identities = 19/78 (24%), Positives = 38/78 (48%), Gaps = 3/78 (3%)

Query: 48  LASKASEDLEEQLKKIKDYIYRTLNA-KIASDVYNRVLILVNEYCTNEELFDKESVKISD 106
           L  +  +D+ ++  K++DYI+ TLN+ ++     + VL   +   T +  F  + +    
Sbjct: 288 LQKEVGKDVSDE--KLRDYIWNTLNSGRVVPGYGHAVLRKTDPRYTCQREFALKHLPHDP 345

Query: 107 LLIQDIQLYALVDEMLKE 124
           +     QLY +V  +L E
Sbjct: 346 MFKLVAQLYKIVPNVLLE 363
>pdb|1REP|C Chain C, Crystal Structure Of Replication Initiator Protein Repe54
           Of Mini-F Plasmid Complexed With An Iteron Dna
          Length = 251

 Score = 24.3 bits (51), Expect = 8.5
 Identities = 14/43 (32%), Positives = 20/43 (45%)

Query: 110 QDIQLYALVDEMLKEDKYQVQHTILKGIIKRKYDEAYSLNSED 152
           Q   LY  VD++ K D    +H  +  I   KY E + L S +
Sbjct: 35  QKRMLYLFVDQIRKSDGTLQEHDGICEIHVAKYAEIFGLTSAE 77
  Database: /var/www/html/HP/blast_new/blast/db/pdbaa
    Posted date:  Dec 20, 2002 11:08 AM
  Number of letters in database: 2,899,336
  Number of sequences in database:  13,198
  
Lambda     K      H
   0.319    0.134    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 863,857
Number of Sequences: 13198
Number of extensions: 29882
Number of successful extensions: 120
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 115
Number of HSP's gapped (non-prelim): 22
length of query: 176
length of database: 2,899,336
effective HSP length: 82
effective length of query: 94
effective length of database: 1,817,100
effective search space: 170807400
effective search space used: 170807400
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 51 (24.3 bits)