BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645583|ref|NP_207759.1| virulence associated
protein D (vapD) [Helicobacter pylori 26695]
(95 letters)
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
13,198 sequences; 2,899,336 total letters
Searching...........................done
Score E
Sequences producing significant alignments: (bits) Value
pdb|1D7F|A Chain A, Crystal Structure Of Asparagine 233-Rep... 24 3.1
pdb|1C0A|A Chain A, Crystal Structure Of The E. Coli Aspart... 24 3.1
pdb|3RP2|A Chain A, Rat Mast Cell Protease II (RMCPII) >gi|... 24 3.1
pdb|1EQR|A Chain A, Crystal Structure Of Free Aspartyl-Trna... 24 3.1
pdb|1PAM|A Chain A, Cyclodextrin Glucanotransferase >gi|194... 24 3.1
pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cere... 23 4.0
pdb|1EDU|A Chain A, Crystal Structure Of The Enth Domain Of... 23 5.2
pdb|1QMD|A Chain A, Calcium Bound Closed Form Alpha-Toxin F... 23 6.9
pdb|1KY5|A Chain A, D244e Mutant S-Adenosylhomocysteine Hyd... 23 6.9
pdb|1KY4|A Chain A, S-Adenosylhomocysteine Hydrolase Refine... 23 6.9
pdb|1GYG|A Chain A, R32 Closed Form Of Alpha-Toxin From Clo... 23 6.9
pdb|1DE5|A Chain A, L-Rhamnose Isomerase >gi|10120982|pdb|1... 23 6.9
pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase >... 22 8.9
pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Iso... 22 8.9
pdb|1D4G|A Chain A, Crystal Structure Of S-Adenosylhomocyst... 22 8.9
pdb|1INZ|A Chain A, Solution Structure Of The Epsin N-Termi... 22 8.9
pdb|5ACN| Aconitase (E.C.4.2.1.3) (Inactive (3fe-4s) Clus... 22 8.9
pdb|1EYH|A Chain A, Crystal Structure Of The Epsin N-Termin... 22 8.9
pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase 22 8.9
pdb|1NIS| Aconitase (E.C.4.2.1.3) Complex With Nitrocitra... 22 8.9
pdb|8ACN| Aconitase (E.C.4.2.1.3) Complex With Nitroisoci... 22 8.9
pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex 22 8.9
pdb|1H0A|A Chain A, Epsin Enth Bound To Ins(1,4,5)p3 22 8.9
pdb|1AMJ| Aconitase (E.C.4.2.1.3) Complexed With Sulfate ... 22 8.9
>pdb|1D7F|A Chain A, Crystal Structure Of Asparagine 233-Replaced Cyclodextrin
Glucanotransferase From Alkalophilic Bacillus Sp. 1011
Determined At 1.9 A Resolution
pdb|1D7F|B Chain B, Crystal Structure Of Asparagine 233-Replaced Cyclodextrin
Glucanotransferase From Alkalophilic Bacillus Sp. 1011
Determined At 1.9 A Resolution
pdb|1DED|A Chain A, Crystal Structure Of Alkalophilic Asparagine 233-Replaced
Cyclodextrin Glucanotransferase Complexed With An
Inhibitor Acarbose, At 2.0 A Resolution
pdb|1DED|B Chain B, Crystal Structure Of Alkalophilic Asparagine 233-Replaced
Cyclodextrin Glucanotransferase Complexed With An
Inhibitor Acarbose, At 2.0 A Resolution
Length = 686
Score = 23.9 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 31 MEQHGFKWQQGSVYFGDETINAVTCVA--TVQILAKQIPSFAVCVKDVRM 78
++ GF +G+VYFG + VA QI K IP+ + D+R+
Sbjct: 517 IDGRGFGSGKGTVYFGTTAVTGADIVAWEDTQIQVK-IPAVPGGIYDIRV 565
>pdb|1C0A|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna Synthetase
: Trnaasp : Aspartyl-Adenylate Complex
Length = 585
Score = 23.9 bits (50), Expect = 3.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 21 SKVYSDIRKFMEQHGF 36
+K+ S +R+FM+ HGF
Sbjct: 142 AKITSLVRRFMDDHGF 157
>pdb|3RP2|A Chain A, Rat Mast Cell Protease II (RMCPII)
pdb|3RP2|B Chain B, Rat Mast Cell Protease II (RMCPII)
Length = 224
Score = 23.9 bits (50), Expect = 3.1
Identities = 8/20 (40%), Positives = 15/20 (75%)
Query: 75 DVRMLKIEENNDLMPAIKIV 94
D+ +LK+E+ +L PA+ +V
Sbjct: 89 DIMLLKLEKKVELTPAVNVV 108
>pdb|1EQR|A Chain A, Crystal Structure Of Free Aspartyl-Trna Synthetase From
Escherichia Coli
pdb|1EQR|B Chain B, Crystal Structure Of Free Aspartyl-Trna Synthetase From
Escherichia Coli
pdb|1EQR|C Chain C, Crystal Structure Of Free Aspartyl-Trna Synthetase From
Escherichia Coli
pdb|1IL2|A Chain A, Crystal Structure Of The E. Coli Aspartyl-Trna
Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex
pdb|1IL2|B Chain B, Crystal Structure Of The E. Coli Aspartyl-Trna
Synthetase:yeast Trnaasp:aspartyl-Adenylate Complex
Length = 590
Score = 23.9 bits (50), Expect = 3.1
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 21 SKVYSDIRKFMEQHGF 36
+K+ S +R+FM+ HGF
Sbjct: 142 AKITSLVRRFMDDHGF 157
>pdb|1PAM|A Chain A, Cyclodextrin Glucanotransferase
pdb|1PAM|B Chain B, Cyclodextrin Glucanotransferase
pdb|1I75|A Chain A, Crystal Structure Of Cyclodextrin Glucanotransferase From
Alkalophilic Bacillus Sp.#1011 Complexed With 1-
Deoxynojirimycin
pdb|1I75|B Chain B, Crystal Structure Of Cyclodextrin Glucanotransferase From
Alkalophilic Bacillus Sp.#1011 Complexed With 1-
Deoxynojirimycin
Length = 686
Score = 23.9 bits (50), Expect = 3.1
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Query: 31 MEQHGFKWQQGSVYFGDETINAVTCVA--TVQILAKQIPSFAVCVKDVRM 78
++ GF +G+VYFG + VA QI K IP+ + D+R+
Sbjct: 517 IDGRGFGSGKGTVYFGTTAVTGADIVAWEDTQIQVK-IPAVPGGIYDIRV 565
>pdb|1A3W|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Fbp, Pg, Mn2+ And K+
pdb|1A3W|B Chain B, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Fbp, Pg, Mn2+ And K+
pdb|1A3X|A Chain A, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Pg, Mn2+ And K+
pdb|1A3X|B Chain B, Pyruvate Kinase From Saccharomyces Cerevisiae Complexed
With Pg, Mn2+ And K+
Length = 500
Score = 23.5 bits (49), Expect = 4.0
Identities = 12/37 (32%), Positives = 20/37 (53%)
Query: 41 GSVYFGDETINAVTCVATVQILAKQIPSFAVCVKDVR 77
G G+ INAVT +A ++A+Q ++ D+R
Sbjct: 333 GETAKGNYPINAVTTMAETAVIAEQAIAYLPNYDDMR 369
>pdb|1EDU|A Chain A, Crystal Structure Of The Enth Domain Of Rat Epsin 1
Length = 149
Score = 23.1 bits (48), Expect = 5.2
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 13 LNENAVNLSKVYSDIRKFMEQHGFKWQ 39
L N V S++ S I K + HG W+
Sbjct: 35 LTYNVVAFSEIXSXIWKRLNDHGKNWR 61
>pdb|1QMD|A Chain A, Calcium Bound Closed Form Alpha-Toxin From Clostridium
Perfringens
pdb|1QMD|B Chain B, Calcium Bound Closed Form Alpha-Toxin From Clostridium
Perfringens
pdb|1QM6|A Chain A, R32 Form Of Clostridium Perfringens Alpha-Toxin Strain
pdb|1QM6|B Chain B, R32 Form Of Clostridium Perfringens Alpha-Toxin Strain
Length = 370
Score = 22.7 bits (47), Expect = 6.9
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 17/58 (29%)
Query: 7 DLDTNCLNENAVNLSKVYSD-----IRKFMEQHGFKWQQGSV------------YFGD 47
D D N +N+ L+ D IRKF ++WQ+G+ YFGD
Sbjct: 73 DTDNNFSKDNSWYLAYSIPDTGESQIRKFSALARYEWQRGNYKQATFYLGEAMHYFGD 130
>pdb|1KY5|A Chain A, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY5|B Chain B, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY5|C Chain C, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY5|D Chain D, D244e Mutant S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1D4F|A Chain A, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1D4F|B Chain B, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1D4F|C Chain C, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
pdb|1D4F|D Chain D, Crystal Structure Of Recombinant Rat-Liver D244e Mutant S-
Adenosylhomocysteine Hydrolase
Length = 431
Score = 22.7 bits (47), Expect = 6.9
Identities = 8/31 (25%), Positives = 18/31 (57%)
Query: 7 DLDTNCLNENAVNLSKVYSDIRKFMEQHGFK 37
++D LNENAV + + +++ ++G +
Sbjct: 304 EIDVKWLNENAVEKVNIKPQVDRYLLKNGHR 334
>pdb|1KY4|A Chain A, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY4|B Chain B, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY4|C Chain C, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1KY4|D Chain D, S-Adenosylhomocysteine Hydrolase Refined With
Noncrystallographic Restraints
pdb|1K0U|A Chain A, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|B Chain B, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|C Chain C, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|D Chain D, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|E Chain E, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|F Chain F, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|G Chain G, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1K0U|H Chain H, Inhibition Of S-Adenosylhomocysteine Hydrolase By "acyclic
Sugar" Adenosine Analogue D-Eritadenine
pdb|1B3R|A Chain A, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1B3R|B Chain B, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1B3R|C Chain C, Rat Liver S-Adenosylhomocystein Hydrolase
pdb|1B3R|D Chain D, Rat Liver S-Adenosylhomocystein Hydrolase
Length = 431
Score = 22.7 bits (47), Expect = 6.9
Identities = 8/31 (25%), Positives = 18/31 (57%)
Query: 7 DLDTNCLNENAVNLSKVYSDIRKFMEQHGFK 37
++D LNENAV + + +++ ++G +
Sbjct: 304 EIDVKWLNENAVEKVNIKPQVDRYLLKNGHR 334
>pdb|1GYG|A Chain A, R32 Closed Form Of Alpha-Toxin From Clostridium
Perfringens Strain Cer89l43
pdb|1GYG|B Chain B, R32 Closed Form Of Alpha-Toxin From Clostridium
Perfringens Strain Cer89l43
pdb|1CA1| Alpha-Toxin From Clostridium Perfringens
Length = 370
Score = 22.7 bits (47), Expect = 6.9
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 17/58 (29%)
Query: 7 DLDTNCLNENAVNLSKVYSD-----IRKFMEQHGFKWQQGSV------------YFGD 47
D D N +N+ L+ D IRKF ++WQ+G+ YFGD
Sbjct: 73 DTDNNFSKDNSWYLAYSIPDTGESQIRKFSALARYEWQRGNYKQATFYLGEAMHYFGD 130
>pdb|1DE5|A Chain A, L-Rhamnose Isomerase
pdb|1DE6|A Chain A, L-Rhamnose Isomerase
pdb|1DE6|B Chain B, L-Rhamnose Isomerase
pdb|1DE6|C Chain C, L-Rhamnose Isomerase
pdb|1DE6|D Chain D, L-Rhamnose Isomerase
pdb|1DE5|B Chain B, L-Rhamnose Isomerase
pdb|1DE5|C Chain C, L-Rhamnose Isomerase
pdb|1DE5|D Chain D, L-Rhamnose Isomerase
Length = 426
Score = 22.7 bits (47), Expect = 6.9
Identities = 21/93 (22%), Positives = 41/93 (43%), Gaps = 14/93 (15%)
Query: 7 DLDTNC----LNENAVNLSKVYSDIRKFMEQHGFKWQQGSVYFGDETINAVTCVATVQIL 62
D + +C L+ + LS IR+F H ++ S YFG++ + T ++
Sbjct: 137 DFNPSCFSHPLSADGFTLSHADDSIRQFWIDHCKASRRVSAYFGEQ-------LGTPSVM 189
Query: 63 AKQIPSFAVCVKDVRMLKIEENNDLMPAIKIVL 95
IP +KD+ + ++ L+ A+ V+
Sbjct: 190 NIWIPD---GMKDITVDRLAPRQRLLAALDEVI 219
>pdb|1C97|A Chain A, S642a:isocitrate Complex Of Aconitase
pdb|1B0K|A Chain A, S642a:fluorocitrate Complex Of Aconitase
Length = 753
Score = 22.3 bits (46), Expect = 8.9
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 26 DIRKFMEQHGFKWQQGSVYFGDE 48
D ++ +QHG +W V GDE
Sbjct: 617 DTARYYKQHGIRW----VVIGDE 635
>pdb|1B0J|A Chain A, Crystal Structure Of Aconitase With Isocitrate
Length = 754
Score = 22.3 bits (46), Expect = 8.9
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 26 DIRKFMEQHGFKWQQGSVYFGDE 48
D ++ +QHG +W V GDE
Sbjct: 618 DTARYYKQHGIRW----VVIGDE 636
>pdb|1D4G|A Chain A, Crystal Structure Of S-Adenosylhomocysteine Hydrolase
(Adohcyase) Complexed With A Potent Inhibitor
D-Eritadenine
pdb|1D4G|B Chain B, Crystal Structure Of S-Adenosylhomocysteine Hydrolase
(Adohcyase) Complexed With A Potent Inhibitor
D-Eritadenine
pdb|1D4G|C Chain C, Crystal Structure Of S-Adenosylhomocysteine Hydrolase
(Adohcyase) Complexed With A Potent Inhibitor
D-Eritadenine
pdb|1D4G|D Chain D, Crystal Structure Of S-Adenosylhomocysteine Hydrolase
(Adohcyase) Complexed With A Potent Inhibitor
D-Eritadenine
pdb|1D4G|E Chain E, Crystal Structure Of S-Adenosylhomocysteine Hydrolase
(Adohcyase) Complexed With A Potent Inhibitor
D-Eritadenine
pdb|1D4G|F Chain F, Crystal Structure Of S-Adenosylhomocysteine Hydrolase
(Adohcyase) Complexed With A Potent Inhibitor
D-Eritadenine
pdb|1D4G|G Chain G, Crystal Structure Of S-Adenosylhomocysteine Hydrolase
(Adohcyase) Complexed With A Potent Inhibitor
D-Eritadenine
pdb|1D4G|H Chain H, Crystal Structure Of S-Adenosylhomocysteine Hydrolase
(Adohcyase) Complexed With A Potent Inhibitor
D-Eritadenine
Length = 430
Score = 22.3 bits (46), Expect = 8.9
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 7 DLDTNCLNENAVNLSKVYSDIRKFMEQHG 35
++D LNENAV + + +++ ++G
Sbjct: 303 EIDVKWLNENAVEKVNIKPQVDRYLLKNG 331
>pdb|1INZ|A Chain A, Solution Structure Of The Epsin N-Terminal Homology
(Enth) Domain Of Human Epsin
Length = 148
Score = 22.3 bits (46), Expect = 8.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 13 LNENAVNLSKVYSDIRKFMEQHGFKWQ 39
L N V S++ S I K + HG W+
Sbjct: 50 LTYNVVAFSEIMSMIWKRLNDHGKNWR 76
>pdb|5ACN| Aconitase (E.C.4.2.1.3) (Inactive (3fe-4s) Cluster Form)
pdb|6ACN| Aconitase (E.C.4.2.1.3) (Activated (4fe-4s) Cluster Form)
pdb|7ACN| Aconitase (E.C.4.2.1.3) Complex With Isocitrate
Length = 754
Score = 22.3 bits (46), Expect = 8.9
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 26 DIRKFMEQHGFKWQQGSVYFGDE 48
D ++ +QHG +W V GDE
Sbjct: 618 DTARYYKQHGIRW----VVIGDE 636
>pdb|1EYH|A Chain A, Crystal Structure Of The Epsin N-Terminal Homology
(Enth) Domain At 1.56 Angstrom Resolution
Length = 144
Score = 22.3 bits (46), Expect = 8.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 13 LNENAVNLSKVYSDIRKFMEQHGFKWQ 39
L N V S++ S I K + HG W+
Sbjct: 32 LTYNVVAFSEIMSMIWKRLNDHGKNWR 58
>pdb|1C96|A Chain A, S642a:citrate Complex Of Aconitase
Length = 753
Score = 22.3 bits (46), Expect = 8.9
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 26 DIRKFMEQHGFKWQQGSVYFGDE 48
D ++ +QHG +W V GDE
Sbjct: 617 DTARYYKQHGIRW----VVIGDE 635
>pdb|1NIS| Aconitase (E.C.4.2.1.3) Complex With Nitrocitrate (Major Occupancy
Form)
pdb|1NIT| Aconitase (E.C.4.2.1.3) Complex With Sulfate (Minor Occupancy
Form)
Length = 754
Score = 22.3 bits (46), Expect = 8.9
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 26 DIRKFMEQHGFKWQQGSVYFGDE 48
D ++ +QHG +W V GDE
Sbjct: 618 DTARYYKQHGIRW----VVIGDE 636
>pdb|8ACN| Aconitase (E.C.4.2.1.3) Complex With Nitroisocitrate
pdb|1ACO| Aconitase (Mitochondrial) (E.C.4.2.1.3) Complex With
Transaconitate
pdb|1FGH| Complex With 4-Hydroxy-Trans-Aconitate
Length = 754
Score = 22.3 bits (46), Expect = 8.9
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 26 DIRKFMEQHGFKWQQGSVYFGDE 48
D ++ +QHG +W V GDE
Sbjct: 618 DTARYYKQHGIRW----VVIGDE 636
>pdb|1B0M|A Chain A, Aconitase R644q:fluorocitrate Complex
Length = 753
Score = 22.3 bits (46), Expect = 8.9
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 26 DIRKFMEQHGFKWQQGSVYFGDE 48
D ++ +QHG +W V GDE
Sbjct: 617 DTARYYKQHGIRW----VVIGDE 635
>pdb|1H0A|A Chain A, Epsin Enth Bound To Ins(1,4,5)p3
Length = 158
Score = 22.3 bits (46), Expect = 8.9
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 13 LNENAVNLSKVYSDIRKFMEQHGFKWQ 39
L N V S++ S I K + HG W+
Sbjct: 46 LTYNVVAFSEIMSMIWKRLNDHGKNWR 72
>pdb|1AMJ| Aconitase (E.C.4.2.1.3) Complexed With Sulfate And Hydroxide
pdb|1AMI| Aconitase (E.C.4.2.1.3) Complexed With Alpha-Methyl-Isocitrate
Length = 754
Score = 22.3 bits (46), Expect = 8.9
Identities = 9/23 (39%), Positives = 13/23 (56%), Gaps = 4/23 (17%)
Query: 26 DIRKFMEQHGFKWQQGSVYFGDE 48
D ++ +QHG +W V GDE
Sbjct: 618 DTARYYKQHGIRW----VVIGDE 636
Database: /var/www/html/HP/blast_new/blast/db/pdbaa
Posted date: Dec 20, 2002 11:08 AM
Number of letters in database: 2,899,336
Number of sequences in database: 13,198
Lambda K H
0.323 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 517,807
Number of Sequences: 13198
Number of extensions: 17090
Number of successful extensions: 72
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 61
Number of HSP's gapped (non-prelim): 24
length of query: 95
length of database: 2,899,336
effective HSP length: 71
effective length of query: 24
effective length of database: 1,962,278
effective search space: 47094672
effective search space used: 47094672
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 46 (22.3 bits)