BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645674|ref|NP_207851.1| hypothetical protein
[Helicobacter pylori 26695]
(160 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207851.1| (NC_000915) hypothetical protein [Helicoba... 311 2e-84
ref|NP_223084.1| (NC_000921) putative [Helicobacter pylori ... 302 8e-82
ref|NP_281762.1| (NC_002163) hypothetical protein Cj0579c [... 82 2e-15
ref|NP_229746.1| (NC_002505) conserved hypothetical protein... 64 4e-10
ref|NP_438356.1| (NC_000907) Sec-independent protein secret... 60 6e-09
ref|NP_246629.1| (NC_002663) unknown [Pasteurella multocida... 57 5e-08
ref|NP_457777.1| (NC_003198) sec-independent protein transl... 56 2e-07
ref|NP_462859.1| (NC_003197) component of Sec-independent p... 56 2e-07
ref|NP_639431.1| (NC_003902) sec-independent protein transl... 52 2e-06
ref|NP_312794.1| (NC_002695) Sec-independent protein transl... 51 4e-06
ref|NP_283600.1| (NC_003116) putative sec-independent prote... 51 5e-06
ref|NP_273644.1| (NC_003112) hypothetical protein [Neisseri... 51 5e-06
ref|NP_407224.1| (NC_003143) Sec-independent protein transl... 50 7e-06
ref|NP_253756.1| (NC_002516) translocation protein TatB [Ps... 49 2e-05
ref|NP_297853.1| (NC_002488) hypothetical protein [Xylella ... 48 4e-05
gb|AAA92108.1| (U48404) ORF4 [Azotobacter chroococcum] 48 4e-05
ref|NP_006435.1| (NM_006444) SMC2 structural maintenance of... 47 7e-05
ref|NP_644516.1| (NC_003919) sec-independent protein transl... 47 7e-05
ref|XP_050024.1| (XM_050024) similar to SMC2 structural mai... 47 7e-05
gb|AAF15293.3|AAF15293 erythrocyte membrane-associated gian... 47 1e-04
emb|CAC29148.1| (AJ299712) TatB protein [Pseudomonas stutzeri] 46 1e-04
gb|AAD54769.1|AF120932_1 (AF120932) SMC-like protein [Arabi... 45 2e-04
ref|NP_200954.1| (NM_125539) MIM protein [Arabidopsis thali... 45 2e-04
gb|AAF63479.1|AF237944_1 (AF237944) HCF106C precursor prote... 45 4e-04
pir||T01297 HCF106 protein precursor, chloroplast - maize >... 44 6e-04
gb|AAF27716.1|AF071821_1 (AF071821) PspA [Streptococcus pne... 44 6e-04
gb|AAL68798.1| (AF461118) TatB [Ralstonia eutropha] 44 6e-04
gb|AAC13303.1| (AF056936) mature parasite-infected erythroc... 44 6e-04
ref|NP_055450.1| (NM_014635) KIAA0336 gene product [Homo sa... 44 8e-04
sp|P02567|MYSD_CAEEL Myosin heavy chain D (MHC D) >gi|6786|... 44 8e-04
ref|NP_492053.1| (NM_059652) myosin heavy chain [Caenorhabd... 44 8e-04
gb|AAK77947.1| (AY039660) M protein [Streptococcus pyogenes] 43 0.001
ref|NP_604026.1| (NC_003454) Chromosome partition protein s... 43 0.001
ref|NP_655178.1| (NC_003995) hypothetical protein predicted... 43 0.001
gb|AAK15625.1|AF323442_1 (AF323442) 235 kDa rhoptry protein... 43 0.001
ref|NP_561782.1| (NC_003366) probable alpha-N-acetylglucosa... 43 0.001
gb|AAF75554.1|AF270648_1 (AF270648) mature parasite-infecte... 43 0.001
gb|AAA29651.1| (M69183) mature-parasite-infected erythrocyt... 42 0.002
pir||A45605 mature-parasite-infected erythrocyte surface an... 42 0.002
ref|NP_593009.1| (NC_003424) hypothetical coiled-coil prote... 42 0.002
emb|CAA71376.1| (Y10350) nuclear protein SDK2 [Xenopus laevis] 42 0.002
sp|P50533|XCPE_XENLA CHROMOSOME ASSEMBLY PROTEIN XCAP-E >gi... 42 0.003
ref|NP_521062.1| (NC_003295) HYPOTHETICAL PROTEIN [Ralstoni... 42 0.003
pir||T18372 repeat organellar protein - Plasmodium chabaudi... 42 0.003
dbj|BAA86602.1| (AB033114) KIAA1288 protein [Homo sapiens] 42 0.003
ref|NP_473081.1| (NC_000910) hypothetical protein [Plasmodi... 42 0.003
ref|NP_065800.1| (NM_020749) AT2 receptor-interacting prote... 42 0.003
ref|NP_348377.1| (NC_003030) Chromosome segregation SMC pro... 41 0.004
gb|AAM08496.1| (AC116960) embryogenic callus protein - like... 41 0.004
gb|EAA01538.1| (AAAB01008987) agCP12845 [Anopheles gambiae ... 41 0.004
gb|AAF27719.1|AF071826_1 (AF071826) PspA [Streptococcus pne... 41 0.005
ref|NP_078312.1| (NC_002162) unique hypothetical [Ureaplasm... 41 0.005
ref|NP_600350.1| (NC_003450) COG1826:Sec-independent protei... 41 0.005
gb|AAF27718.1|AF071824_1 (AF071824) PspA [Streptococcus pne... 41 0.005
pir||T30330 gelsolin-related protein GRP125 - slime mold (D... 41 0.005
emb|CAA57228.1| (X81475) lmp1 [Mycoplasma hominis] 40 0.007
pir||T18351 lmp1 protein - Mycoplasma hominis >gi|790242|gb... 40 0.007
ref|NP_079390.1| (NM_025114) hypothetical protein FLJ13615 ... 40 0.007
gb|AAB93873.1| (U90827) RNA polymerase beta-subunit [Aristi... 40 0.007
dbj|BAB14894.1| (AK024357) unnamed protein product [Homo sa... 40 0.007
pir||T30822 lmp1 protein - Mycoplasma hominis >gi|790244|gb... 40 0.007
ref|NP_377732.1| (NC_003106) 317aa long hypothetical repeat... 40 0.007
gb|AAA81014.1| (U21963) Lmp1 [Mycoplasma hominis] 40 0.007
gb|AAK01919.1| (AF317887) monoclonal antibody 3H11 antigen ... 40 0.007
ref|NP_629298.1| (NC_003888) putative membrane protein [Str... 40 0.007
emb|CAC21724.1| (AJ292256) twin arginine translocation comp... 40 0.007
ref|NP_057279.1| (NM_016195) M-phase phosphoprotein 1; mito... 40 0.009
gb|AAK15626.1|AF323443_1 (AF323443) 235 kDa rhoptry protein... 40 0.009
dbj|BAB69456.1| (AB033337) mitotic kinesin-related protein ... 40 0.009
pir||T46451 hypothetical protein DKFZp434I152.1 - human (fr... 40 0.009
ref|NP_071582.1| (NM_022246) RAD50 homolog (S. cerevisiae) ... 40 0.009
dbj|BAB15043.1| (AK024959) unnamed protein product [Homo sa... 40 0.009
ref|NP_487918.1| (NC_003272) hypothetical protein [Nostoc s... 40 0.009
gb|AAB88727.1| (U93121) M-phase phosphoprotein-1 [Homo sapi... 40 0.009
gb|AAM33706.1| (AC117076) K08H10.2A PROTEIN. 6/100 [Dictyos... 40 0.009
ref|XP_005803.4| (XM_005803) M-phase phosphoprotein 1 [Homo... 40 0.009
pir||T28677 rhoptry protein - Plasmodium yoelii >gi|457146|... 40 0.009
>ref|NP_207851.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
sp|O25700|TATB_HELPY Sec-independent protein translocase protein tatB homolog
pir||D64652 probable ABC transporter - Helicobacter pylori (strain 26695)
gb|AAD08110.1| (AE000613) H. pylori predicted coding region HP1060 [Helicobacter
pylori 26695]
Length = 160
Score = 311 bits (797), Expect = 2e-84
Identities = 160/160 (100%), Positives = 160/160 (100%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK
Sbjct: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
Query: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLN 120
KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLN
Sbjct: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLN 120
Query: 121 EEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKENV 160
EEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKENV
Sbjct: 121 EEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKENV 160
>ref|NP_223084.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZM58|TATB_HELPJ Sec-independent protein translocase protein tatB homolog
pir||E71942 hypothetical protein jhp0365 - Helicobacter pylori (strain J99)
gb|AAD05939.1| (AE001471) putative [Helicobacter pylori J99]
Length = 160
Score = 302 bits (774), Expect = 8e-82
Identities = 153/160 (95%), Positives = 158/160 (98%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MFGMGFFEILVVL+VAIIFLGPEKFPQAVVD+VKFFRAVKKTLNDAKDTLDKEINIEEIK
Sbjct: 1 MFGMGFFEILVVLIVAIIFLGPEKFPQAVVDIVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
Query: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLN 120
KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDY++SLETNTIPNHLN
Sbjct: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYKRSLETNTIPNHLN 120
Query: 121 EEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKENV 160
EEVSNEEALNKEVSSDESPKEVQL TDNN KEHDKEKE+V
Sbjct: 121 EEVSNEEALNKEVSSDESPKEVQLTTDNNAKEHDKEKEHV 160
>ref|NP_281762.1| (NC_002163) hypothetical protein Cj0579c [Campylobacter jejuni]
sp|Q9PHT7|TATB_CAMJE Sec-independent protein translocase protein tatB homolog
pir||B81405 hypothetical protein Cj0579c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB75215.1| (AL139075) hypothetical protein Cj0579c [Campylobacter jejuni]
Length = 138
Score = 82.4 bits (202), Expect = 2e-15
Identities = 50/149 (33%), Positives = 85/149 (56%), Gaps = 15/149 (10%)
Query: 4 MGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIKKET 63
M F EI+V+LVVAI+ LGP+K P+A+V + K +AVK+ ++DAK +++KEI I ++K+E
Sbjct: 1 MSFGEIIVILVVAILVLGPDKLPEAIVQIAKILKAVKRNIDDAKSSIEKEIRINDLKEEA 60
Query: 64 LEYQKLFENKVESL-KGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEE 122
+Y+ F + E++ K + EE +D K +D++ + L ++ + +
Sbjct: 61 KKYKDEFSSTNENIRKKLSFEEFDDLK----------RDILDKTKVDLTFDSRDDKVKNN 110
Query: 123 VSNEEALNKEVSSDESPKEVQLATDNNTK 151
+S + LN E + S E Q D N K
Sbjct: 111 LSGQN-LNTEEKPNLSKLETQ---DKNGK 135
>ref|NP_229746.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
sp|P57063|TATB_VIBCH Sec-independent protein translocase protein tatB homolog
pir||H82366 conserved hypothetical protein VC0087 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF93265.1| (AE004099) conserved hypothetical protein [Vibrio cholerae]
Length = 133
Score = 64.3 bits (155), Expect = 4e-10
Identities = 37/106 (34%), Positives = 55/106 (50%), Gaps = 8/106 (7%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEI- 59
MF +GF+E++++ +VA++ LGPE+ P A+ V KF A K N KD L E+ ++E+
Sbjct: 1 MFDIGFWELVLIAIVALVVLGPERLPHAIRSVAKFVSAAKSMANSVKDELAHELKVQELQ 60
Query: 60 ----KKETLEYQKL---FENKVESLKGVKIEELEDAKVTAENEIKS 98
K E + Q L + VESLK E T +E S
Sbjct: 61 ENLRKAEQMGMQNLSPELQKSVESLKQAAQEVQRPYAATPSSEASS 106
>ref|NP_438356.1| (NC_000907) Sec-independent protein secretion pathway component
TatB [Haemophilus influenzae Rd]
sp|P57047|TATB_HAEIN Sec-independent protein translocase protein tatB
Length = 186
Score = 60.5 bits (145), Expect = 6e-09
Identities = 40/161 (24%), Positives = 89/161 (54%), Gaps = 16/161 (9%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEI- 59
MF +GF E+++++V+ ++ LGP++ P A+ V+ + + ++ + ++ L +E+ ++E+
Sbjct: 1 MFDIGFSELILLMVLGLVVLGPKRLPIAIRTVMDWVKTIRGLAANVQNELKQELKLQELQ 60
Query: 60 ----KKETLEYQKLFENKVESLKGVKIE------ELED----AKVTAENEIKSIQDLMQD 105
K E+L Q L ++++ +K + ELED A T E++IK I+ ++
Sbjct: 61 DSIKKAESLNLQALSPELSKTVEELKAQADKMKAELEDKAAQAGTTVEDQIKEIKSAAEN 120
Query: 106 YQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLAT 146
+KS ++ E +S E ++++ E+ ++V+L T
Sbjct: 121 AEKSQNAISV-EEAAETLSEAERTPTDLTALETHEKVELNT 160
>ref|NP_246629.1| (NC_002663) unknown [Pasteurella multocida]
sp|P57800|TATB_PASMU Sec-independent protein translocase protein tatB homolog
gb|AAK03774.1| (AE006205) unknown [Pasteurella multocida]
Length = 191
Score = 57.4 bits (137), Expect = 5e-08
Identities = 39/165 (23%), Positives = 82/165 (49%), Gaps = 24/165 (14%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEI- 59
MF +GF E+ ++LV+ ++ LGP++ P A+ V+ + ++ ++ ++ L +E+ ++E+
Sbjct: 1 MFDIGFSELFLILVIGLLVLGPKRLPVAIRTVMGWVATIRGLASNVQNELKQELKLQELQ 60
Query: 60 ----KKETLEYQKL---FENKVESLKGVKIEELEDA--------KVTAENEIKSIQDLMQ 104
K E L +Q+L VE LK E++ A T E +IK I++ +
Sbjct: 61 ESIKKAEELNFQQLSPELSKTVEELK-ASAEKMRTALEQKAAATNTTLEEQIKEIKNATE 119
Query: 105 DYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNN 149
++L P+ E + ++ L+ ++ +LA +N+
Sbjct: 120 STSQTLTEQLTPSEQVTEATTDDVLS-------PAEQAELAEEND 157
>ref|NP_457777.1| (NC_003198) sec-independent protein translocase protein [Salmonella
enterica subsp. enterica serovar Typhi]
emb|CAD07918.1| (AL627278) sec-independent protein translocase protein [Salmonella
enterica subsp. enterica serovar Typhi]
Length = 182
Score = 55.8 bits (133), Expect = 2e-07
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF +GF E+L+V V+ +I LGP++ P AV V + RA++ ++ L +E+ ++E +
Sbjct: 1 MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQ 60
Query: 61 KETLEYQKL-FENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHL 119
+ +K EN LK ++EL A +K Q S E +TI N +
Sbjct: 61 DSLKKVEKASLENLTPELK-ASMDELRQ----AAESMKRTYSANDPEQASDEAHTIHNPV 115
Query: 120 -------NEEVSNEEALNKEVSSDESPKEVQLATDNNTK 151
+E V+ A + + ++ P+ V+ +T+
Sbjct: 116 VKGNETQHEGVTPAAAETQASAPEQKPEPVKANVPESTE 154
>ref|NP_462859.1| (NC_003197) component of Sec-independent protein secretion pathway
[Salmonella typhimurium LT2]
sp|P57048|TATB_SALTY Sec-independent protein translocase protein tatB
gb|AAL22818.1| (AE008885) component of Sec-independent protein secretion pathway
[Salmonella typhimurium LT2]
Length = 182
Score = 55.8 bits (133), Expect = 2e-07
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 13/159 (8%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF +GF E+L+V V+ +I LGP++ P AV V + RA++ ++ L +E+ ++E +
Sbjct: 1 MFDIGFSELLLVFVIGLIVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQ 60
Query: 61 KETLEYQKL-FENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHL 119
+ +K EN LK ++EL A +K Q S E +TI N +
Sbjct: 61 DSLKKVEKASLENLTPELK-ASMDELRQ----AAESMKRTYSANDPEQASDEAHTIHNPV 115
Query: 120 -------NEEVSNEEALNKEVSSDESPKEVQLATDNNTK 151
+E V+ A + + ++ P+ V+ +T+
Sbjct: 116 VKGNETQHEGVTPAAAETQASAPEQKPEPVKANVPESTE 154
>ref|NP_639431.1| (NC_003902) sec-independent protein translocase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gb|AAM43313.1| (AE012532) sec-independent protein translocase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
Length = 195
Score = 52.4 bits (124), Expect = 2e-06
Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 21/143 (14%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF +GF E+ ++ VVA++ LGPE+ P+A + R + + K L++E+ EE+K
Sbjct: 1 MFDIGFSELALIAVVALVVLGPERLPKAARFAGLWVRRARMQWDSVKQELERELEAEELK 60
Query: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLN 120
+ +++++ + AE ++++ Q ++D + L L+
Sbjct: 61 R-------------------SLQDVQASLREAEGQLRNTQQQVEDGARGLHDQA--RELH 99
Query: 121 EEVSNEEALNKEVSSDESPKEVQ 143
+EV + + + +P E+Q
Sbjct: 100 DEVGRDIDIRTSATPLAAPLELQ 122
>ref|NP_312794.1| (NC_002695) Sec-independent protein translocase [Escherichia coli
O157:H7]
sp|O69415|TATB_ECOLI Sec-independent protein translocase protein tatB
emb|CAA06725.1| (AJ005830) TatB protein [Escherichia coli]
gb|AAC19241.1| (AF067848) MttA2 [Escherichia coli]
dbj|BAB38190.1| (AP002567) Sec-independent protein translocase [Escherichia coli
O157:H7]
Length = 171
Score = 51.2 bits (121), Expect = 4e-06
Identities = 33/128 (25%), Positives = 69/128 (53%), Gaps = 20/128 (15%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF +GF E+L+V ++ ++ LGP++ P AV V + RA++ ++ L +E+ ++E +
Sbjct: 1 MFDIGFSELLLVFIIGLVVLGPQRLPVAVKTVAGWIRALRSLATTVQNELTQELKLQEFQ 60
Query: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLN 120
+SLK K+E+ +T E+K+ D ++ +S++ + + N +
Sbjct: 61 --------------DSLK--KVEKASLTNLTP--ELKASMDELRQAAESMKRSYVAN--D 100
Query: 121 EEVSNEEA 128
E +++EA
Sbjct: 101 PEKASDEA 108
>ref|NP_283600.1| (NC_003116) putative sec-independent protein translocase component
[Neisseria meningitidis Z2491]
sp|Q9JVK1|TATB_NEIMA Sec-independent protein translocase protein tatB homolog
pir||D81925 probable sec-independent protein translocase component NMA0804
[imported] - Neisseria meningitidis (group A strain
Z2491)
emb|CAB84087.1| (AL162754) putative sec-independent protein translocase component
[Neisseria meningitidis Z2491]
Length = 228
Score = 50.8 bits (120), Expect = 5e-06
Identities = 29/114 (25%), Positives = 54/114 (46%), Gaps = 8/114 (7%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF G E++ V ++A+I LGPE+ P+A + +++ + K D +I +EE++
Sbjct: 1 MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVGSVKQEFDTQIELEELR 60
Query: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNT 114
K E++ +SLK + E + I D ++ ++K E T
Sbjct: 61 KAKQEFEAAAAQVRDSLK--------ETGTDMEGNLHDISDGLKPWEKLPEQRT 106
>ref|NP_273644.1| (NC_003112) hypothetical protein [Neisseria meningitidis MC58]
sp|Q9K0J6|TATB_NEIMB Sec-independent protein translocase protein tatB homolog
pir||E81181 hypothetical protein NMB0600 [imported] - Neisseria meningitidis
(group B strain MD58)
gb|AAF41028.1| (AE002415) hypothetical protein [Neisseria meningitidis MC58]
Length = 228
Score = 50.8 bits (120), Expect = 5e-06
Identities = 29/114 (25%), Positives = 54/114 (46%), Gaps = 8/114 (7%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF G E++ V ++A+I LGPE+ P+A + +++ + K D +I +EE++
Sbjct: 1 MFDFGLGELVFVGIIALIVLGPERLPEAARTAGRLIGRLQRFVGSVKQEFDTQIELEELR 60
Query: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNT 114
K E++ +SLK + E + I D ++ ++K E T
Sbjct: 61 KAKQEFEAAAAQVRDSLK--------ETGTDMEGNLHDISDGLKPWEKLPEQRT 106
>ref|NP_407224.1| (NC_003143) Sec-independent protein translocase protein TatB
[Yersinia pestis]
emb|CAC93244.1| (AJ414158) Sec-independent protein translocase protein TatB
[Yersinia pestis]
Length = 220
Score = 50.4 bits (119), Expect = 7e-06
Identities = 27/89 (30%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF +GF E+L+VLV+ ++ LGPE+ P AV V + R ++ ++ L +E+ ++E++
Sbjct: 1 MFDIGFSELLLVLVIGLVVLGPERLPVAVRTVSGWIRTLRSLAATVQNELAQELKLQELQ 60
Query: 61 KETLEYQKL-FENKVESLKGVKIEELEDA 88
+ ++ +N LK ++EL++A
Sbjct: 61 DSLKKVEQAGLQNLTPELK-ASMDELKEA 88
>ref|NP_253756.1| (NC_002516) translocation protein TatB [Pseudomonas aeruginosa]
sp|Q9HUB4|TATB_PSEAE Sec-independent protein translocase protein tatB homolog
pir||H83011 translocation protein TatB PA5069 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG08454.1|AE004920_4 (AE004920) translocation protein TatB [Pseudomonas aeruginosa]
Length = 141
Score = 48.9 bits (115), Expect = 2e-05
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MFG+ F E+L+V +VA++ LGPE+ P A + +K++ N K +++EI +EI+
Sbjct: 1 MFGISFSELLLVGLVALLVLGPERLPGAARTAGLWIGRLKRSFNTIKQEVEREIGADEIR 60
Query: 61 KE 62
++
Sbjct: 61 RQ 62
>ref|NP_297853.1| (NC_002488) hypothetical protein [Xylella fastidiosa 9a5c]
sp|Q9PFU4|TATB_XYLFA Sec-independent protein translocase protein tatB homolog
pir||A82791 hypothetical protein XF0563 [imported] - Xylella fastidiosa
(strain 9a5c)
gb|AAF83373.1|AE003903_9 (AE003903) hypothetical protein [Xylella fastidiosa 9a5c]
Length = 140
Score = 47.8 bits (112), Expect = 4e-05
Identities = 29/116 (25%), Positives = 53/116 (45%), Gaps = 7/116 (6%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF +GF E+L++ VVA++ LGPE+ P+A R + K L++E+ E +K
Sbjct: 1 MFDIGFSELLLIAVVALVVLGPERLPKAARFAGLLVRRARTQWESIKQELERELEAEALK 60
Query: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSI-QDLMQDYQKSLETNTI 115
+ Q++ + L+ + +N I + + +D TNT+
Sbjct: 61 RNLENAQQVIHDAQAQLQS------NQQDMNIQNSISILHEQTKRDIHPDRNTNTL 110
>gb|AAA92108.1| (U48404) ORF4 [Azotobacter chroococcum]
Length = 192
Score = 47.8 bits (112), Expect = 4e-05
Identities = 24/71 (33%), Positives = 45/71 (62%), Gaps = 1/71 (1%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF +GF E+L+V +VA++ LGPE+ P A + +K++ N K +++EI +EI+
Sbjct: 80 MFDIGFSELLLVGLVALLVLGPERLPVAARMAGLWIGRLKRSFNTLKTEVEREIGADEIR 139
Query: 61 KETLEYQKLFE 71
++ L +++ E
Sbjct: 140 RQ-LHNERILE 149
>ref|NP_006435.1| (NM_006444) SMC2 structural maintenance of chromosomes 2-like 1;
structural maintenance of chromosomes (SMC) family
member, chromosome-associated protein E; SMC2
(structural maintenance of chromosomes 2, yeast)-like 1
[Homo sapiens]
gb|AAC72360.1| (AF092563) chromosome-associated protein-E [Homo sapiens]
Length = 1197
Score = 47.0 bits (110), Expect = 7e-05
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 38 AVKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELED-------AKV 90
A+KKT+ ++++TL N +EI+++ E ++ ENK+++ + + EL+D AK
Sbjct: 747 ALKKTIEESEETLK---NTKEIQRKAEEKYEVLENKMKNAEAERERELKDAQKKLDCAKT 803
Query: 91 TAENEIKSIQDLMQDYQK-SLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNN 149
A+ K +++ Q+ + +LE + EA+N+ + S ES EV A
Sbjct: 804 KADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVAK 863
Query: 150 TKEH-DKEKENV 160
KE +K +E V
Sbjct: 864 NKESVNKAQEEV 875
>ref|NP_644516.1| (NC_003919) sec-independent protein translocase [Xanthomonas
axonopodis pv. citri str. 306]
gb|AAM39052.1| (AE012074) sec-independent protein translocase [Xanthomonas
axonopodis pv. citri str. 306]
Length = 208
Score = 47.0 bits (110), Expect = 7e-05
Identities = 24/99 (24%), Positives = 50/99 (50%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF +G E+ ++ VVA++ LGPE+ P+A + R + + K L++E+ EE+K
Sbjct: 1 MFDIGVGELTLIAVVALVVLGPERLPKAARFAGLWVRRARMQWDSVKQELERELEAEELK 60
Query: 61 KETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSI 99
+ + Q + L+ + + + A+ ++ + I
Sbjct: 61 RSLQDVQASLREAEDQLRNKQQQVEQGARALHDDVSRDI 99
>ref|XP_050024.1| (XM_050024) similar to SMC2 structural maintenance of chromosomes
2-like 1 (yeast); structural maintenance of chromosomes
(SMC) family member, chromosome-associated protein E;
SMC2 (structural maintenance of chromosomes 2,
yeast)-like 1 [Homo sapiens]
Length = 1197
Score = 47.0 bits (110), Expect = 7e-05
Identities = 37/132 (28%), Positives = 68/132 (51%), Gaps = 12/132 (9%)
Query: 38 AVKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELED-------AKV 90
A+KKT+ ++++TL N +EI+++ E ++ ENK+++ + + EL+D AK
Sbjct: 747 ALKKTIEESEETLK---NTKEIQRKAEEKYEVLENKMKNAEAERERELKDAQKKLDCAKT 803
Query: 91 TAENEIKSIQDLMQDYQK-SLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNN 149
A+ K +++ Q+ + +LE + EA+N+ + S ES EV A
Sbjct: 804 KADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYESQIEVMAAEVAK 863
Query: 150 TKEH-DKEKENV 160
KE +K +E V
Sbjct: 864 NKESVNKAQEEV 875
>gb|AAF15293.3|AAF15293 erythrocyte membrane-associated giant protein antigen 332 [Plasmodium
falciparum]
Length = 5458
Score = 46.6 bits (109), Expect = 1e-04
Identities = 29/114 (25%), Positives = 62/114 (53%), Gaps = 3/114 (2%)
Query: 48 DTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENEI-KSIQDLMQDY 106
+ + +++ EEIK+E L+ +++ E +++S + +K E+L+ ++ E + + I++ D
Sbjct: 3627 EDIKEQLVPEEIKEEQLDSEEIKEEQLDS-EEIKEEQLDSEEIKEEQLVPEEIKEEQLDS 3685
Query: 107 QKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKENV 160
++ E +P + EE N E + +E E KE QL ++ KE + E +
Sbjct: 3686 EEIKEEQLVPEEIKEEQLNSEEIKEEQLDSEEIKEEQLDSE-EIKEEQLDSEEI 3738
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/111 (28%), Positives = 57/111 (50%), Gaps = 9/111 (8%)
Query: 52 KEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDA-KVTAENEIKSIQDLMQD---YQ 107
KE+ EE KE + + E + E+ +IE++ D K T + E + ++ +Q+ Q
Sbjct: 2 KELESEEFPKEKYNIEDMEETEKEN----EIEKIMDENKETEQTEEGNTEEFVQEKELNQ 57
Query: 108 KSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKE 158
++LE I +H+ EE +E +ESP E +L +NN + ++E E
Sbjct: 58 ETLENEIIVDHIKEEEDTRNVKEQESVLEESPIE-ELPVENNIGKINEEVE 107
>emb|CAC29148.1| (AJ299712) TatB protein [Pseudomonas stutzeri]
Length = 139
Score = 46.2 bits (108), Expect = 1e-04
Identities = 22/62 (35%), Positives = 41/62 (65%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
MF +GF E+L+V +VA++ LGPE+ P AV + +K++ + K +++EI +EI+
Sbjct: 1 MFDIGFTELLLVGLVALMVLGPERLPGAVRPTGLWVGRLKRSFANIKAEVEREIGADEIR 60
Query: 61 KE 62
++
Sbjct: 61 RQ 62
>gb|AAD54769.1|AF120932_1 (AF120932) SMC-like protein [Arabidopsis thaliana]
gb|AAD54770.1|AF120933_1 (AF120933) SMC-like protein [Arabidopsis thaliana]
Length = 1055
Score = 45.4 bits (106), Expect = 2e-04
Identities = 35/117 (29%), Positives = 60/117 (50%), Gaps = 19/117 (16%)
Query: 40 KKTLNDAKDTLDKEINIEEI----KKETLEYQKL---FENKVESLKGVKIEELEDAKVTA 92
++ + D ++ +KE +E++ K+ L+ KL FEN ES KG +I+ E+A
Sbjct: 718 REIMKDLEEIDEKEAFLEKLQNCLKEAELKANKLTALFENMRESAKG-EIDAFEEA---- 772
Query: 93 ENEIKSIQDLMQD-------YQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEV 142
ENE+K I+ +Q Y+ ++ +P+ N E + EE NK SD+ E+
Sbjct: 773 ENELKKIEKDLQSAEAEKIHYENIMKNKVLPDIKNAEANYEELKNKRKESDQKASEI 829
>ref|NP_200954.1| (NM_125539) MIM protein [Arabidopsis thaliana]
dbj|BAB10445.1| (AB016887) SMC-like protein [Arabidopsis thaliana]
Length = 1057
Score = 45.4 bits (106), Expect = 2e-04
Identities = 35/117 (29%), Positives = 60/117 (50%), Gaps = 19/117 (16%)
Query: 40 KKTLNDAKDTLDKEINIEEI----KKETLEYQKL---FENKVESLKGVKIEELEDAKVTA 92
++ + D ++ +KE +E++ K+ L+ KL FEN ES KG +I+ E+A
Sbjct: 720 REIMKDLEEIDEKEAFLEKLQNCLKEAELKANKLTALFENMRESAKG-EIDAFEEA---- 774
Query: 93 ENEIKSIQDLMQD-------YQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEV 142
ENE+K I+ +Q Y+ ++ +P+ N E + EE NK SD+ E+
Sbjct: 775 ENELKKIEKDLQSAEAEKIHYENIMKNKVLPDIKNAEANYEELKNKRKESDQKASEI 831
>gb|AAF63479.1|AF237944_1 (AF237944) HCF106C precursor protein [Zea mays]
gb|AAF63480.1|AF237945_1 (AF237945) HCF106C precursor protein [Zea mays]
Length = 238
Score = 44.7 bits (104), Expect = 4e-04
Identities = 42/164 (25%), Positives = 68/164 (40%), Gaps = 20/164 (12%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKD-------TLDKE 53
+FG+G E LV+ VVA++ GP+ + ++ K RA + T+ + +D TL++E
Sbjct: 68 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIREIQDVSREFRSTLERE 127
Query: 54 INIEEIKKETLEYQKLFENKVESLKGVKIEEL-------EDAKVTAENEIKSI------Q 100
I I+E+ + T N + I+ E KVT E S Q
Sbjct: 128 IGIDEVSQSTNYTPTTMNNNQQPAADSNIKPAPAPYTSDELVKVTEEQIAASAAAAWNPQ 187
Query: 101 DLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQL 144
Q+ + T + S+ A +SD PK+V L
Sbjct: 188 QPASSQQQEVYTTPSEDAPTSGGSDGPAAPALAASDSDPKQVNL 231
>pir||T01297 HCF106 protein precursor, chloroplast - maize
gb|AAC01571.1| (AF027808) HCF106 precursor protein [Zea mays]
Length = 243
Score = 43.9 bits (102), Expect = 6e-04
Identities = 29/108 (26%), Positives = 54/108 (49%), Gaps = 8/108 (7%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKD-------TLDKE 53
+FG+G E LV+ VVA++ GP+ + ++ K RA + T+ + +D TL++E
Sbjct: 70 LFGVGAPEALVIGVVALLVFGPKGLAEVARNLGKTLRAFQPTIRELQDVSREFRSTLERE 129
Query: 54 INIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQD 101
I I+E+ + T N + ++ E A T+E +K ++
Sbjct: 130 IGIDEVSQSTNYRPTTMNNNQQPAADPNVKP-EPAPYTSEELMKVTEE 176
>gb|AAF27716.1|AF071821_1 (AF071821) PspA [Streptococcus pneumoniae]
Length = 481
Score = 43.9 bits (102), Expect = 6e-04
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 4/129 (3%)
Query: 29 VVDVVKFFRAVKKTLNDAKDTLDK-EINIEEIKKETLEYQKLFENKVESLKGVKIEELED 87
V D+ K VKKT+ D + + K E ++E K+ EY K + E K +L +
Sbjct: 220 VADLEKEIADVKKTVADLEKEVAKLEKDVEGFKESDGEYAKFYLEAAEKDLATKKAKLAE 279
Query: 88 AKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATD 147
AK+ A + ++ ++ + LE + + L+ E ++ L+KE + E K+V+ A
Sbjct: 280 AKIKAATKKAELEPELEKAEAELE--NLLSTLDPEGKTQDELDKEAAEAELNKKVE-ALQ 336
Query: 148 NNTKEHDKE 156
N E ++E
Sbjct: 337 NQVAELEEE 345
>gb|AAL68798.1| (AF461118) TatB [Ralstonia eutropha]
Length = 170
Score = 43.9 bits (102), Expect = 6e-04
Identities = 18/67 (26%), Positives = 38/67 (55%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
M +G ++ ++ VA+I +GPE+ P+ V ++ +ND K + +E+ +EE++
Sbjct: 1 MIDLGISKLALIGAVALIVIGPERLPKVARTVGALVGRAQRYINDVKAEVSREVELEELR 60
Query: 61 KETLEYQ 67
K E++
Sbjct: 61 KMRTEFE 67
>gb|AAC13303.1| (AF056936) mature parasite-infected erythrocyte surface antigen
[Plasmodium falciparum]
Length = 1661
Score = 43.9 bits (102), Expect = 6e-04
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 37 RAVKKTLNDAKD-TLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENE 95
+ VK+ + KD + +EI IEEIKKE + K NK E+ V ++E+ + V ++
Sbjct: 1103 KEVKEKDTENKDKVIGQEIIIEEIKKEVKKRVKKRNNKNENKDNVIVQEIMNEDVNEKDT 1162
Query: 96 IKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEAL--NKEVSSDESPKEVQLATDNNTKEH 153
+ + Q+ +K EEV +E + +EV E KE + + E
Sbjct: 1163 ANKDKVIEQEKEK------------EEVKEKEEVKEKEEVKEKEEVKEKDTESKDKEIEQ 1210
Query: 154 DKEKENV 160
+KEKE V
Sbjct: 1211 EKEKEEV 1217
Score = 43.1 bits (100), Expect = 0.001
Identities = 44/178 (24%), Positives = 87/178 (48%), Gaps = 29/178 (16%)
Query: 12 VLVVAIIFLGPEKFPQAVVDVVK--FFRAVKKTLNDAKD-TLDKEINIEEIKKETLEY-- 66
+L + I +G E + V V+K + +K+ ++KD + +EI +EE+K+E +
Sbjct: 754 ILEIKDIVIGQEVIIEEVKKVIKKKVEKGIKENHTESKDKVIGQEIIVEEVKEEIEKQVE 813
Query: 67 QKLFENKVES---------LKGVKIEELEDAK--VTAENEIKSIQ-DLMQDYQKSLETNT 114
+ + EN ES +KG EE + K VT + ++K ++ ++ ++ +K ++
Sbjct: 814 EGIKENDTESKDKVIGQEVIKGDVNEEGPENKDKVTKQEKVKEVKKEVKKEVKKRVKKRN 873
Query: 115 IPNH----------LNEEVSNEEALNK--EVSSDESPKEVQLATDNNTKEHDKEKENV 160
N + E+V+ ++ NK E+ ++ +EV+ + KE KEKE V
Sbjct: 874 NKNERKDNVIGKEIMKEDVNEKDTANKDKEIEQEKEKEEVKEKEEVKEKEEVKEKEEV 931
Score = 41.2 bits (95), Expect = 0.004
Identities = 36/125 (28%), Positives = 59/125 (46%), Gaps = 6/125 (4%)
Query: 37 RAVKKTLNDAKD-TLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENE 95
+ VK+ + KD + +EI IEEIKKE + K NK E+ V ++E+ + + +
Sbjct: 983 KEVKEKDTENKDKVIGQEIIIEEIKKEVKKRVKKRNNKNENKDNVIVQEIMNEMLRKDTA 1042
Query: 96 IKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDK 155
K D + + +K E + E+ +E +EV E KE + + E +K
Sbjct: 1043 NK---DKVIEQEKEKEEVKEKEEVKEKEEVKE--KEEVKEKEEVKEKDTESKDKEIEQEK 1097
Query: 156 EKENV 160
EKE V
Sbjct: 1098 EKEEV 1102
>ref|NP_055450.1| (NM_014635) KIAA0336 gene product [Homo sapiens]
dbj|BAA20794.1| (AB002334) KIAA0336 [Homo sapiens]
Length = 1583
Score = 43.5 bits (101), Expect = 8e-04
Identities = 33/113 (29%), Positives = 56/113 (49%), Gaps = 18/113 (15%)
Query: 46 AKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQD 105
AK +DKE+ E+++KE QK+ E+ + ELE+ +V + E K +Q MQ+
Sbjct: 994 AKAMVDKELEAEKLQKE----QKIKEH------ATTVNELEELQVQLQKEKKQLQKTMQE 1043
Query: 106 YQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKE 158
+ + +N E+++ E L KE++ Q T+ N K D E+E
Sbjct: 1044 LELVKKDAQQTTLMNMEIADYERLMKELN--------QKLTNKNNKIEDLEQE 1088
>sp|P02567|MYSD_CAEEL Myosin heavy chain D (MHC D)
emb|CAA30854.1| (X08065) myosin 1 [Caenorhabditis elegans]
Length = 1938
Score = 43.5 bits (101), Expect = 8e-04
Identities = 30/117 (25%), Positives = 60/117 (50%), Gaps = 11/117 (9%)
Query: 39 VKKTLNDAKDTL----DKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAEN 94
V+K+LNDA D L +K ++E+ +++ + + + +E++ G + LE+ K EN
Sbjct: 922 VEKSLNDANDRLSEHEEKNADLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEE-KAAKEN 980
Query: 95 EIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTK 151
+I S+QD M +++ +N+E E N+++ D +E + A N +
Sbjct: 981 QIHSLQDEMNSQDETI------GKINKEKKLLEENNRQLVDDLQAEEAKQAQANRLR 1031
>ref|NP_492053.1| (NM_059652) myosin heavy chain [Caenorhabditis elegans]
pir||T21193 hypothetical protein R06C7.10 - Caenorhabditis elegans
pir||MWKW1 myosin heavy chain D [similarity] - Caenorhabditis elegans
emb|CAA95806.1| (Z71261) Identical to C.elegans myosin heavy chain (SW:MYSD_CAEEL),
contains similarity to Pfam domain: PF00063 (Myosin head
(motor domain)), Score=1494.1, E-value=0, N=1; PF01576
(Myosin tail), Score=1117.4, E-value=0, N=2~cDNA EST
yk4d9.5 comes from >
emb|CAA95848.1| (Z71266) Identical to C.elegans myosin heavy chain (SW:MYSD_CAEEL),
contains similarity to Pfam domain: PF00063 (Myosin head
(motor domain)), Score=1494.1, E-value=0, N=1; PF01576
(Myosin tail), Score=1117.4, E-value=0, N=2~cDNA EST
yk4d9.5 comes from >
Length = 1938
Score = 43.5 bits (101), Expect = 8e-04
Identities = 30/117 (25%), Positives = 60/117 (50%), Gaps = 11/117 (9%)
Query: 39 VKKTLNDAKDTL----DKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAEN 94
V+K+LNDA D L +K ++E+ +++ + + + +E++ G + LE+ K EN
Sbjct: 922 VEKSLNDANDRLSEHEEKNADLEKQRRKAQQEVENLKKSIEAVDGNLAKSLEE-KAAKEN 980
Query: 95 EIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTK 151
+I S+QD M +++ +N+E E N+++ D +E + A N +
Sbjct: 981 QIHSLQDEMNSQDETI------GKINKEKKLLEENNRQLVDDLQAEEAKQAQANRLR 1031
>gb|AAK77947.1| (AY039660) M protein [Streptococcus pyogenes]
Length = 249
Score = 42.7 bits (99), Expect = 0.001
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 27/155 (17%)
Query: 31 DVVKFFRAVKKTLNDAKDTLDK-EINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAK 89
D+ + + +D K+TLDK + I+++K E + K + LKG+K +ELE K
Sbjct: 45 DLAPLLASTIQNNDDLKETLDKTKKEIDDLKSENEGLGTTLQKKEQELKGLKDDELERLK 104
Query: 90 ------VTAENEIKSIQDLMQDYQKSLE-TNTIPNHLNEEVSNEEALNKEV--------- 133
E E K+++D + D Q+ L+ N E +EA K++
Sbjct: 105 NERHDHDKKEAERKALEDKLADKQEHLDGALRYINEKEAERKEKEAEQKKLKEEKQISDA 164
Query: 134 ----------SSDESPKEVQLATDNNTKEHDKEKE 158
+S E+ K+V+ N T E DK KE
Sbjct: 165 SRQGLRRDLDASREAKKQVEKDLANLTAEFDKVKE 199
>ref|NP_604026.1| (NC_003454) Chromosome partition protein smc [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gb|AAL95325.1| (AE010618) Chromosome partition protein smc [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 1193
Score = 42.7 bits (99), Expect = 0.001
Identities = 32/117 (27%), Positives = 61/117 (51%), Gaps = 11/117 (9%)
Query: 39 VKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKS 98
++K L + ++ +K+ I + E K FENK+ +L+ +K+E+ + EN K
Sbjct: 342 IEKKLEEVTESKNKKDEISKNIVEMAAANKEFENKIFNLENIKVEKFD----LIENRAKK 397
Query: 99 IQDLMQDYQKSLETNTIPNHLNE-EVSNEEALNKEVSSDESPKEVQLATDNNTKEHD 154
++DL + +K L +N I N+ + + S +E N + +E+ K++ N KE D
Sbjct: 398 VRDL--ELEKQLASNEIENNEKKLKSSQDEVENFKQELEEANKKLLA----NNKEKD 448
>ref|NP_655178.1| (NC_003995) hypothetical protein predicted by GeneMark [Bacillus
anthracis A2012] [Bacillus anthracis str. A2012]
Length = 254
Score = 42.7 bits (99), Expect = 0.001
Identities = 28/96 (29%), Positives = 51/96 (52%), Gaps = 7/96 (7%)
Query: 50 LDKEINIEEIKKETLEYQKLF--ENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQ 107
+DKE+N++ I K+ +++KL E + + K +ELE+ K + E+K +++ Q+
Sbjct: 157 VDKEVNLQAIDKQIQDFEKLLVDETAKQVSEAEKQKELEEKK---QEEVKKLEEKKQEEA 213
Query: 108 KSLE--TNTIPNHLNEEVSNEEALNKEVSSDESPKE 141
K LE L E+ EEA N+E S + ++
Sbjct: 214 KKLEEKKQEEAKKLEEKKKQEEAKNQEESKKQEEQK 249
>gb|AAK15625.1|AF323442_1 (AF323442) 235 kDa rhoptry protein [Plasmodium yoelii yoelii]
Length = 2752
Score = 42.7 bits (99), Expect = 0.001
Identities = 29/145 (20%), Positives = 69/145 (47%), Gaps = 23/145 (15%)
Query: 22 PEKFPQAVVDVVK-------FFRAVKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKV 74
P++ + + +VVK ++ + K LN+ + + ++EE+K L Y +
Sbjct: 1152 PKEIEKKIENVVKKXDKKKNIYKEINKLLNEISEIEKDKTSLEELKNINLSYGR------ 1205
Query: 75 ESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVS 134
SL + +E++++ K AE IK+++ ++D + N + E+ + ++
Sbjct: 1206 -SLGNIFLEQIDEEKKKAERTIKAMEAYIED---------LDNIKKKSDEIEKDMKIKMD 1255
Query: 135 SDESPKEVQLATDNNTKEHDKEKEN 159
+E K + ++ D++ H K K++
Sbjct: 1256 INEEMKALNISNDDDRNYHTKSKDH 1280
>ref|NP_561782.1| (NC_003366) probable alpha-N-acetylglucosaminidase [Clostridium
perfringens]
dbj|BAB80572.1| (AP003188) probable alpha-N-acetylglucosaminidase [Clostridium
perfringens]
Length = 2104
Score = 42.7 bits (99), Expect = 0.001
Identities = 34/149 (22%), Positives = 77/149 (50%), Gaps = 14/149 (9%)
Query: 16 AIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVE 75
A++ G ++P+ VD A+ + + A++ + ++E+I+ T ++ + VE
Sbjct: 1809 AVVGNGNGQYPKEAVD------ALNEAIRIAEEGFESSTSLEDIRNITRTLKEAIDTFVE 1862
Query: 76 SLKGVKIEELEDAKVTAENEIKS-----IQDLMQDYQKSLETNTIPNHLNEEVSNEEALN 130
S+ + +LE+ + E+++++ I + +++ +K+L+ LN E +NEE +N
Sbjct: 1863 SVNVIDKAQLEEIISSIESKLENAEGVYIPNAIEELRKALD--KAKEVLNNEGANEENIN 1920
Query: 131 KEVSS-DESPKEVQLATDNNTKEHDKEKE 158
K +S E+ + +L+ N E + E E
Sbjct: 1921 KAISDLTEAEAKFELSKVPNKDELNSEIE 1949
>gb|AAF75554.1|AF270648_1 (AF270648) mature parasite-infected erythrocyte surface antigen
[Plasmodium falciparum]
Length = 1323
Score = 42.7 bits (99), Expect = 0.001
Identities = 32/126 (25%), Positives = 64/126 (50%), Gaps = 6/126 (4%)
Query: 34 KFFRAVKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAE 93
K + VKK ++D K KE ++E +E E + E++ ES + + E E+++ +E
Sbjct: 1044 KIGKRVKKPIDDCK----KEREVQEESEEESEEESEEESEEESEEESEEESEEESEEESE 1099
Query: 94 NEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEH 153
E + + + + E+ +EE S EE ++E S +ES +E + ++ ++E
Sbjct: 1100 EESEEESEEESEEESEEESEEESEEESEEESEEE--SEEESEEESEEESEEESEEESEEE 1157
Query: 154 DKEKEN 159
E++N
Sbjct: 1158 SDEEKN 1163
>gb|AAA29651.1| (M69183) mature-parasite-infected erythrocyte surface antigen
[Plasmodium falciparum]
Length = 1510
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 29/178 (16%)
Query: 12 VLVVAIIFLGPEKFPQAVVDVVK--FFRAVKKTLNDAKD-TLDKEINIEEIKKETLEY-- 66
+L + I +G E + V V+K + +K+ ++KD + +EI +EE+K+E +
Sbjct: 746 ILEIKDIVIGQEVIIEEVKKVIKKKVEKGIKENHTESKDKVIGQEIIVEEVKEEIEKQVE 805
Query: 67 QKLFENKVESLKGVKIEEL-----------EDAKVTAENEIKSIQ-DLMQDYQKSLETNT 114
+ + EN ES V EE+ KVT + ++K ++ ++ + +K ++
Sbjct: 806 EGIKENDTESKDKVIGEEVIKGDVNEEGPENKDKVTKQEKVKEVKKEVKKKVKKRVKKRN 865
Query: 115 IPNH----------LNEEVSNEEALNK--EVSSDESPKEVQLATDNNTKEHDKEKENV 160
N + E+V+ ++ NK E+ ++ +EV+ + KE KEKE V
Sbjct: 866 NKNERKDNVIGKEIMKEDVNEKDTANKDKEIEQEKEKEEVKEKEEVKEKEEVKEKEEV 923
>pir||A45605 mature-parasite-infected erythrocyte surface antigen MESA - malaria
parasite (Plasmodium falciparum)
Length = 1526
Score = 42.4 bits (98), Expect = 0.002
Identities = 43/178 (24%), Positives = 84/178 (47%), Gaps = 29/178 (16%)
Query: 12 VLVVAIIFLGPEKFPQAVVDVVK--FFRAVKKTLNDAKD-TLDKEINIEEIKKETLEY-- 66
+L + I +G E + V V+K + +K+ ++KD + +EI +EE+K+E +
Sbjct: 762 ILEIKDIVIGQEVIIEEVKKVIKKKVEKGIKENHTESKDKVIGQEIIVEEVKEEIEKQVE 821
Query: 67 QKLFENKVESLKGVKIEEL-----------EDAKVTAENEIKSIQ-DLMQDYQKSLETNT 114
+ + EN ES V EE+ KVT + ++K ++ ++ + +K ++
Sbjct: 822 EGIKENDTESKDKVIGEEVIKGDVNEEGPENKDKVTKQEKVKEVKKEVKKKVKKRVKKRN 881
Query: 115 IPNH----------LNEEVSNEEALNK--EVSSDESPKEVQLATDNNTKEHDKEKENV 160
N + E+V+ ++ NK E+ ++ +EV+ + KE KEKE V
Sbjct: 882 NKNERKDNVIGKEIMKEDVNEKDTANKDKEIEQEKEKEEVKEKEEVKEKEEVKEKEEV 939
>ref|NP_593009.1| (NC_003424) hypothetical coiled-coil protein [Schizosaccharomyces
pombe]
sp|Q10411|YD86_SCHPO Hypothetical protein C1F3.06c in chromosome I
pir||T38077 hypothetical coiled-coil protein - fission yeast
(Schizosaccharomyces pombe)
emb|CAA94624.1| (Z70690) hypothetical coiled-coil protein [Schizosaccharomyces
pombe]
Length = 1957
Score = 42.4 bits (98), Expect = 0.002
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 13/123 (10%)
Query: 40 KKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSI 99
KK + K D + E E L + K + L ++ E++++ K +E+ S+
Sbjct: 455 KKIKDFEKIEQDLRACLNSSSNELKEKSALIDKKDQELNNLR-EQIKEQKKVSESTQSSL 513
Query: 100 QDLMQD----------YQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNN 149
Q L +D Y+ L N + L E+SN E L+ ++S+ + KE +AT+N
Sbjct: 514 QSLQRDILNEKKKHEVYESQL--NELKGELQTEISNSEHLSSQLSTLAAEKEAAVATNNE 571
Query: 150 TKE 152
E
Sbjct: 572 LSE 574
>emb|CAA71376.1| (Y10350) nuclear protein SDK2 [Xenopus laevis]
Length = 689
Score = 42.0 bits (97), Expect = 0.002
Identities = 38/136 (27%), Positives = 65/136 (46%), Gaps = 23/136 (16%)
Query: 45 DAKDTL--DKEINIEEIKKET---------LEYQKLFENKVESLKGVKIEELEDAKVTAE 93
D +DTL DKE+ I I E LE K E K+E V++EE ++++ E
Sbjct: 334 DMEDTLEEDKEVTISMIDVEMAQDARGVEDLEDSKQMEEKIEEEGRVEVEESQNSQ-WEE 392
Query: 94 NEIKSIQDLM--QDYQKSLETNTIPNHLNEEVSNEEALN--KEVSSDESPKEVQL----- 144
E++ ++D + ++ + ++ N + E+S E L+ + + +E P EVQ
Sbjct: 393 REVEMVEDEVKEEETKDEIKQNISEDQQTFEISQSEVLDLMENLKDNEEPSEVQAENNFT 452
Query: 145 --ATDNNTKEHDKEKE 158
A TKE + E+E
Sbjct: 453 FEAETEATKEPESERE 468
>sp|P50533|XCPE_XENLA CHROMOSOME ASSEMBLY PROTEIN XCAP-E
pir||B55094 chromosomal protein XCAP-E - African clawed frog
gb|AAA64680.1| (U13674) XCAP-E [Xenopus laevis]
Length = 1203
Score = 41.6 bits (96), Expect = 0.003
Identities = 32/128 (25%), Positives = 69/128 (53%), Gaps = 11/128 (8%)
Query: 38 AVKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKV---TAEN 94
++K+T+ ++++TL N +E++K+ E K+ E+K+++ + + EL++A+ TA+
Sbjct: 748 SLKQTIEESEETLK---NTKEVQKKAEEKFKVLEHKMKNAEAERERELKEAQQKLDTAKK 804
Query: 95 EIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKE--VSSDESPKEVQLATDNNTKE 152
+ + M++ Q+ ++ + EE+ E+ K+ + DE+ K Q D+ E
Sbjct: 805 KADASNKKMKEKQQEVDALVLE---LEELKREQTTYKQQIETVDEAMKAYQEQADSMASE 861
Query: 153 HDKEKENV 160
K KE V
Sbjct: 862 VSKNKEAV 869
>ref|NP_521062.1| (NC_003295) HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD16648.1| (AL646072) HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 172
Score = 41.6 bits (96), Expect = 0.003
Identities = 17/77 (22%), Positives = 41/77 (53%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIEEIK 60
M +G ++ ++ VA++ +GPE+ P+ ++ + D K + +EI +EE++
Sbjct: 1 MIDLGISKLALIGAVALVVIGPERLPKVARTAGALIGRAQRYIADVKAEVSREIELEELR 60
Query: 61 KETLEYQKLFENKVESL 77
K E+++ N +++
Sbjct: 61 KMRTEFEEAARNVEQTI 77
>pir||T18372 repeat organellar protein - Plasmodium chabaudi
gb|AAC63403.1| (U43145) repeat organellar protein [Plasmodium chabaudi]
Length = 1939
Score = 41.6 bits (96), Expect = 0.003
Identities = 38/120 (31%), Positives = 64/120 (52%), Gaps = 9/120 (7%)
Query: 48 DTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVT---AENEI--KSIQDL 102
+ L+KE+ +E+ K+ EY+K K E +K ++E L++ ++ EN+I K I L
Sbjct: 103 EELEKELKLEKEKQINKEYEKELNEKSEFIKR-QMELLKEKELNINLKENKINNKEIITL 161
Query: 103 MQDYQ-KSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDK--EKEN 159
++ + +E+ I + +E N E N ++S D+ EVQ DN K + K EKEN
Sbjct: 162 KREEKLNDIESEYIEKNKEKEKLNYEVTNIKMSLDKLTCEVQEKKDNLEKINKKVIEKEN 221
>dbj|BAA86602.1| (AB033114) KIAA1288 protein [Homo sapiens]
Length = 1245
Score = 41.6 bits (96), Expect = 0.003
Identities = 30/110 (27%), Positives = 53/110 (47%), Gaps = 23/110 (20%)
Query: 52 KEINIEEIKKETLEYQKLFEN------------------KVESLKGVKIEELEDAKVTAE 93
++ IEE +K ++ Q+ F+N K+E LK L + K E
Sbjct: 994 RDTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHE 1053
Query: 94 NEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQ 143
E KS++DL+ + Q+SLE +N+ S +ALN+++ S+E + +
Sbjct: 1054 IEKKSLEDLLSEKQESLE-----KQINDLKSENDALNEKLKSEEQKRRAR 1098
>ref|NP_473081.1| (NC_000910) hypothetical protein [Plasmodium falciparum]
pir||E71606 hypothetical protein PFB0765w - malaria parasite (Plasmodium
falciparum)
gb|AAC71942.1| (AE001417) hypothetical protein [Plasmodium falciparum 3D7]
Length = 980
Score = 41.6 bits (96), Expect = 0.003
Identities = 29/117 (24%), Positives = 57/117 (47%), Gaps = 5/117 (4%)
Query: 47 KDTLDKEIN--IEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLM- 103
K+ DKEIN IE+ K+ E + + NK++S+ ++E+ + + E+K ++++
Sbjct: 521 KNKYDKEINMIIEQYNKKIQEEKDMLNNKIKSMDQTHKNQIEEMQEENKKELKRLKNVCD 580
Query: 104 QDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKENV 160
+ Q + H+ E+V EE N D+ K + D + +KE E++
Sbjct: 581 MNLQSQILIKENEKHMQEKV--EEYKNLLKQKDQELKNIIQEYDERIEIQNKEMEDI 635
>ref|NP_065800.1| (NM_020749) AT2 receptor-interacting protein 1 [Homo sapiens]
gb|AAG33674.1|AF121259_1 (AF121259) transcription factor [Homo sapiens]
gb|AAL37035.1|AF293357_1 (AF293357) AT2 receptor-interacting protein 1 [Homo sapiens]
Length = 436
Score = 41.6 bits (96), Expect = 0.003
Identities = 30/110 (27%), Positives = 53/110 (47%), Gaps = 23/110 (20%)
Query: 52 KEINIEEIKKETLEYQKLFEN------------------KVESLKGVKIEELEDAKVTAE 93
++ IEE +K ++ Q+ F+N K+E LK L + K E
Sbjct: 185 RDTYIEEAEKYKMQLQEQFDNLNAAHETSKLEIEASHSEKLELLKKAYEASLSEIKKGHE 244
Query: 94 NEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQ 143
E KS++DL+ + Q+SLE +N+ S +ALN+++ S+E + +
Sbjct: 245 IEKKSLEDLLSEKQESLE-----KQINDLKSENDALNEKLKSEEQKRRAR 289
>ref|NP_348377.1| (NC_003030) Chromosome segregation SMC protein, ATPase [Clostridium
acetobutylicum]
gb|AAK79717.1|AE007684_5 (AE007684) Chromosome segregation SMC protein, ATPase [Clostridium
acetobutylicum]
Length = 1191
Score = 41.2 bits (95), Expect = 0.004
Identities = 35/117 (29%), Positives = 59/117 (49%), Gaps = 17/117 (14%)
Query: 37 RAVKKTLNDAKD---TLDKEINIEEIKKETLEYQKLFENKVESLK--------GVKIEEL 85
+++K+ NDA D T+ + N I K+ +E E+K+ES+K +KI E+
Sbjct: 379 KSIKQYKNDAIDIISTISQNNNEVVILKKEIESN---ESKLESIKRAGEGYSKSLKINEV 435
Query: 86 EDAKVTAENEIKSIQDLMQDYQKSLETNTIP-NHLNEEVSNEEALNKEVSSDESPKE 141
K T E+ I D + Y+ + N + LN +S+EE LN+E++S + E
Sbjct: 436 --TKNTLSEELVKINDKISGYENQIRENRSKISKLNRIISDEEKLNRELNSKSNKLE 490
>gb|AAM08496.1| (AC116960) embryogenic callus protein - like embryogenic callus
protein 181, Daucus carota [Dictyostelium discoideum]
Length = 639
Score = 41.2 bits (95), Expect = 0.004
Identities = 24/117 (20%), Positives = 59/117 (49%), Gaps = 7/117 (5%)
Query: 50 LDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSI-------QDL 102
+++E EE+++E E ++ E + E + V+ EE+E+ + E E + + ++
Sbjct: 10 MEEEEEDEEVEEEEEEQEEEEEEEEEKEEMVEDEEIEEPEEEEEEEEEKVVEEEEEEEED 69
Query: 103 MQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKEN 159
++ ++ +ET + + E+ EE K+ E +E + + +E ++E+E+
Sbjct: 70 EEEEEEKVETEELEEEMEEDKEEEETEEKDEEEQEEEEEEEEEEEEEEEEEEEEEED 126
>gb|EAA01538.1| (AAAB01008987) agCP12845 [Anopheles gambiae str. PEST]
Length = 267
Score = 41.2 bits (95), Expect = 0.004
Identities = 27/116 (23%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 51 DKEINIEEIKKETLEYQKL---FENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQ 107
DKE + E++++ LE ++ ++KV +L+ + + + E +IK++++L + ++
Sbjct: 60 DKEAEVLELEEKLLELKRTNHALKSKVRTLEAAERDGTRETNAKLEQQIKTLEELERHHK 119
Query: 108 KSLETNTIPNHLNEEVSNEEALNKEVSSDESPK---EVQLATDNNTKEHDKEKENV 160
+++ + L E SN E ++ + D K E +L T++ TKE + +E +
Sbjct: 120 ETIRS----LELQLEASNAELARQKATLDALEKQLAEEKLTTEDATKEMNAAREQL 171
>gb|AAF27719.1|AF071826_1 (AF071826) PspA [Streptococcus pneumoniae]
Length = 479
Score = 40.8 bits (94), Expect = 0.005
Identities = 33/129 (25%), Positives = 62/129 (47%), Gaps = 4/129 (3%)
Query: 29 VVDVVKFFRAVKKTLNDAKDTLDK-EINIEEIKKETLEYQKLFENKVESLKGVKIEELED 87
V D+ K +KT+ D + + K E ++E K+ EY K + E K +L +
Sbjct: 220 VADLEKEIADAEKTVADLEKEVAKLEKDVEGFKESDGEYAKFYLEAAEKDLATKKAKLAE 279
Query: 88 AKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATD 147
AK+ A + ++ ++ + LE + + L+ E ++ L+KE + E K+V+ A
Sbjct: 280 AKIKAATKKAELEPELEKAEAELE--NLLSTLDPEGKTQDELDKEAAEAELNKKVE-ALQ 336
Query: 148 NNTKEHDKE 156
N E ++E
Sbjct: 337 NQVAELEEE 345
>ref|NP_078312.1| (NC_002162) unique hypothetical [Ureaplasma urealyticum]
pir||G82885 hypothetical protein UU475 [imported] - Ureaplasma urealyticum
gb|AAF30887.1|AE002144_1 (AE002144) unique hypothetical [Ureaplasma urealyticum]
Length = 616
Score = 40.8 bits (94), Expect = 0.005
Identities = 37/142 (26%), Positives = 66/142 (46%), Gaps = 19/142 (13%)
Query: 31 DVVKFFRAVKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIE-ELEDAK 89
+++K F+ +ND I I++ + LF+ ++ LK IE E+
Sbjct: 398 ELIKKFQKANSQINDVV------IKIKQTILSNFKQIYLFKYFIKHLKEFNIELNNENDP 451
Query: 90 VTAENEIKSIQDLMQDYQKSLETNT------IPNHLNEEVSNEEALNKEVSSDESPKEVQ 143
+ N I++IQ++++ Y+K L NT PN + V+N E ++ +SD K +
Sbjct: 452 IKKANRIQTIQEVLKSYEKDLFLNTKINLKLAPNEV-LTVNNLEKIDLTYASDSLQKPQE 510
Query: 144 L-----ATDNNTKEHDKEKENV 160
L +N +E KE EN+
Sbjct: 511 LIAYLELNNNQEREFSKELENL 532
>ref|NP_600350.1| (NC_003450) COG1826:Sec-independent protein secretion pathway
components [Corynebacterium glutamicum]
dbj|BAB98515.1| (AP005277) Hypothetical protein [Corynebacterium glutamicum ATCC
13032]
Length = 156
Score = 40.8 bits (94), Expect = 0.005
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 4 MGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEINIE--EIKK 61
+G+ EI +++VV ++ +GPE+ P+ + D A + +++AK +LD + E EI+K
Sbjct: 5 VGWGEIFLLVVVGLVVIGPERLPRLIQDARAALLAARTAIDNAKQSLDSDFGSEFDEIRK 64
>gb|AAF27718.1|AF071824_1 (AF071824) PspA [Streptococcus pneumoniae]
Length = 480
Score = 40.8 bits (94), Expect = 0.005
Identities = 33/129 (25%), Positives = 62/129 (47%), Gaps = 4/129 (3%)
Query: 29 VVDVVKFFRAVKKTLNDAKDTLDK-EINIEEIKKETLEYQKLFENKVESLKGVKIEELED 87
V D+ K +KT+ D + + K E ++E K+ EY K + E K +L +
Sbjct: 220 VADLEKEIADAEKTVADLEKEVAKLEKDVEGFKESDGEYAKFYLEAAEKDLATKKAKLAE 279
Query: 88 AKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATD 147
AK+ A + ++ ++ + LE + + L+ E ++ L+KE + E K+V+ A
Sbjct: 280 AKIKAATKKAELEPELEKAEAELE--NLLSTLDPEGKTQDELDKEAAEAELNKKVE-ALQ 336
Query: 148 NNTKEHDKE 156
N E ++E
Sbjct: 337 NQVAELEEE 345
>pir||T30330 gelsolin-related protein GRP125 - slime mold (Dictyostelium
discoideum)
gb|AAD00774.1| (U95159) gelsolin-related protein GRP125 [Dictyostelium discoideum]
Length = 1087
Score = 40.8 bits (94), Expect = 0.005
Identities = 27/125 (21%), Positives = 65/125 (51%), Gaps = 15/125 (12%)
Query: 45 DAKDTLDKEIN------------IEEIKKETLEYQKLFENKVESLKG-VKIEELEDAKVT 91
+ K+ + +E+N EE+K+E ++ + E K E +KG K EE+++ +V
Sbjct: 788 ETKEEIKEEVNDEATEVKEVNQVEEEVKEEEVKEEVKVEVKEEEVKGEAKEEEVKEEEVK 847
Query: 92 AENEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTK 151
E + ++++ ++ ++ ++ + +NEE+ EE +E D++ ++ ++ +N T
Sbjct: 848 EEEVKEEVKEVKEEVKEEVKQDK-EEEVNEEI-KEETKEEETKEDDNKEDEKVNEENETV 905
Query: 152 EHDKE 156
+ E
Sbjct: 906 NEENE 910
>emb|CAA57228.1| (X81475) lmp1 [Mycoplasma hominis]
Length = 1344
Score = 40.4 bits (93), Expect = 0.007
Identities = 33/115 (28%), Positives = 58/115 (49%), Gaps = 10/115 (8%)
Query: 50 LDKEINIEEIKKETLEYQKLFENKVESLKG-VKIEELEDAKVTAENEIKSIQDLMQDYQK 108
++ + + I++ETL + + +K + +ELE AK NEIK D +Q+Y K
Sbjct: 83 INNKSETKAIEEETLRLKDAITLLISKIKNQINQKELEFAKF---NEIK---DKLQEYIK 136
Query: 109 SLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTK---EHDKEKENV 160
+ + H+ + + NE +S + + E+Q AT+N K E KEK+N+
Sbjct: 137 NELSKQEYEHIKQNIENELNKYTPISLESTLIEIQNATNNLIKLLNESTKEKDNI 191
>pir||T18351 lmp1 protein - Mycoplasma hominis
gb|AAA81012.1| (U21961) Lmp1 [Mycoplasma hominis]
Length = 1051
Score = 40.4 bits (93), Expect = 0.007
Identities = 33/115 (28%), Positives = 58/115 (49%), Gaps = 10/115 (8%)
Query: 50 LDKEINIEEIKKETLEYQKLFENKVESLKG-VKIEELEDAKVTAENEIKSIQDLMQDYQK 108
++ + + I++ETL + + +K + +ELE AK NEIK D +Q+Y K
Sbjct: 83 INNKSETKAIEEETLRLKDAITLLISKIKNQINQKELEFAKF---NEIK---DKLQEYIK 136
Query: 109 SLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTK---EHDKEKENV 160
+ + H+ + + NE +S + + E+Q AT+N K E KEK+N+
Sbjct: 137 NELSKQEYEHIKQNIENELNKYTPISLESTLIEIQNATNNLIKLLNESTKEKDNI 191
>ref|NP_079390.1| (NM_025114) hypothetical protein FLJ13615 [Homo sapiens]
dbj|BAB14636.1| (AK023677) unnamed protein product [Homo sapiens]
Length = 574
Score = 40.4 bits (93), Expect = 0.007
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 22/136 (16%)
Query: 41 KTLNDAKDTLDKEIN--IEEIK-------KETLEYQKLFENKVESLKGVKIEE------- 84
K+ N+ D + +N +EE K E +EYQ++ N E LK +++
Sbjct: 293 KSKNEEDDPIMVAVNAKVEEWKLILSSKDDEIIEYQQMLHNLREKLKNAQLDADKSNVMA 352
Query: 85 LEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVS--SDESPKEV 142
L+ +++IK + + ++ Y K +E NT + E++ NE NK S S ++ ++
Sbjct: 353 LQQGIQERDSQIKMLTEQVEQYTKEMEKNTC---IIEDLKNELQRNKGASTLSQQTHMKI 409
Query: 143 QLATDNNTKEHDKEKE 158
Q +T + KE KE E
Sbjct: 410 Q-STLDILKEKTKEAE 424
>gb|AAB93873.1| (U90827) RNA polymerase beta-subunit [Aristida congesta subsp.
barbicollis]
Length = 152
Score = 40.4 bits (93), Expect = 0.007
Identities = 35/123 (28%), Positives = 58/123 (46%), Gaps = 8/123 (6%)
Query: 36 FRAVKKTLNDAKDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENE 95
+R ++ L D ++ +KE + E + ETL E++ E+L+ + LED T E+E
Sbjct: 29 YRTREEDLEDEYESPEKEYGVREDEYETL------EDEYETLED-EYGMLEDEYETLEDE 81
Query: 96 IKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDK 155
++++ Q+ +S E N NE + EE +E S E E + T E D
Sbjct: 82 YRTLEKDSQEEYRSPE-NEYKTRKNEYGTLEEDPEEEYGSPEDGSENEYGTLEEYSEEDS 140
Query: 156 EKE 158
E E
Sbjct: 141 EDE 143
>dbj|BAB14894.1| (AK024357) unnamed protein product [Homo sapiens]
Length = 240
Score = 40.4 bits (93), Expect = 0.007
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 64 LEYQKLFENKVESLKGVKIEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEV 123
LE + K+E LK L + K E E KS++DL+ + Q+SLE +N+
Sbjct: 19 LEIEASHSEKLELLKKAYEASLSEIKKGHEIEKKSLEDLLSEKQESLE-----KQINDLK 73
Query: 124 SNEEALNKEVSSDESPKEVQ 143
S +ALN+++ S+E + +
Sbjct: 74 SENDALNEKLKSEEQKRRAR 93
>pir||T30822 lmp1 protein - Mycoplasma hominis
gb|AAA81013.1| (U21962) Lmp1 [Mycoplasma hominis]
Length = 1365
Score = 40.4 bits (93), Expect = 0.007
Identities = 33/115 (28%), Positives = 58/115 (49%), Gaps = 10/115 (8%)
Query: 50 LDKEINIEEIKKETLEYQKLFENKVESLKG-VKIEELEDAKVTAENEIKSIQDLMQDYQK 108
++ + + I++ETL + + +K + +ELE AK NEIK D +Q+Y K
Sbjct: 83 INNKSETKAIEEETLRLKDAITLLISKIKNQINQKELEFAKF---NEIK---DKLQEYIK 136
Query: 109 SLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTK---EHDKEKENV 160
+ + H+ + + NE +S + + E+Q AT+N K E KEK+N+
Sbjct: 137 NELSKQEYEHIKQNIENELNKYTPISLESTLIEIQNATNNLIKLLNESTKEKDNI 191
>ref|NP_377732.1| (NC_003106) 317aa long hypothetical repeat motif-containing gene
protein [Sulfolobus tokodaii]
dbj|BAB66841.1| (AP000987) 317aa long hypothetical repeat motif-containing gene
protein [Sulfolobus tokodaii]
Length = 317
Score = 40.4 bits (93), Expect = 0.007
Identities = 30/126 (23%), Positives = 64/126 (49%), Gaps = 9/126 (7%)
Query: 41 KTLNDAKDTLDKEIN--IEEIKKETLEYQKLFENKVESLKGVKIEELEDAKVTAENEIKS 98
K +N AK L+K+I E+K + + E K+E + +++ED K + EI +
Sbjct: 82 KEINTAKGDLEKKIEGTQTELKADMSTIKGDLEKKIEGTRADLEKKIEDTKTELKGEIST 141
Query: 99 I----QDLMQDYQKSLET--NTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTKE 152
+ + ++D + L+T NT+ L +++ N ++ E D++ K+++ +N +
Sbjct: 142 VKGELEKKIEDTKTELKTEVNTVRQDLEKKIENTR-IDLEKKIDDTRKDLENKIENTRTD 200
Query: 153 HDKEKE 158
+K+ E
Sbjct: 201 LEKKIE 206
>gb|AAA81014.1| (U21963) Lmp1 [Mycoplasma hominis]
Length = 716
Score = 40.4 bits (93), Expect = 0.007
Identities = 33/115 (28%), Positives = 58/115 (49%), Gaps = 10/115 (8%)
Query: 50 LDKEINIEEIKKETLEYQKLFENKVESLKG-VKIEELEDAKVTAENEIKSIQDLMQDYQK 108
++ + + I++ETL + + +K + +ELE AK NEIK D +Q+Y K
Sbjct: 83 INNKSETKAIEEETLRLKDAITLLISKIKNQINQKELEFAKF---NEIK---DKLQEYIK 136
Query: 109 SLETNTIPNHLNEEVSNEEALNKEVSSDESPKEVQLATDNNTK---EHDKEKENV 160
+ + H+ + + NE +S + + E+Q AT+N K E KEK+N+
Sbjct: 137 NELSKQEYEHIKQNIENELNKYTPISLESTLIEIQNATNNLIKLLNESTKEKDNI 191
>gb|AAK01919.1| (AF317887) monoclonal antibody 3H11 antigen [Homo sapiens]
Length = 589
Score = 40.4 bits (93), Expect = 0.007
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 22/136 (16%)
Query: 41 KTLNDAKDTLDKEIN--IEEIK-------KETLEYQKLFENKVESLKGVKIEE------- 84
K+ N+ D + +N +EE K E +EYQ++ N E LK +++
Sbjct: 235 KSKNEEDDPIMVAVNAKVEEWKLILSSKDDEIIEYQQMLHNLREKLKNAQLDADKSNVMA 294
Query: 85 LEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVS--SDESPKEV 142
L+ +++IK + + ++ Y K +E NT + E++ NE NK S S ++ ++
Sbjct: 295 LQQGIQERDSQIKMLTEQVEQYTKEMEKNTC---IIEDLKNELQRNKGASTLSQQTHMKI 351
Query: 143 QLATDNNTKEHDKEKE 158
Q +T + KE KE E
Sbjct: 352 Q-STLDILKEKTKEAE 366
>ref|NP_629298.1| (NC_003888) putative membrane protein [Streptomyces coelicolor
A3(2)]
emb|CAC01351.1| (AL390975) putative membrane protein [Streptomyces coelicolor
A3(2)]
Length = 161
Score = 40.4 bits (93), Expect = 0.007
Identities = 20/85 (23%), Positives = 47/85 (54%), Gaps = 8/85 (9%)
Query: 4 MGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEI-------NI 56
+G E++ ++V+A++ GP+K P+ + DV + R +++ + AK + +E+
Sbjct: 5 IGALELVTLVVLAVLVFGPDKLPKVIQDVTRTIRKIREFSDSAKQDIRQELGPEFKDFEF 64
Query: 57 EEIKKETLEYQKLFENKVESLKGVK 81
E++ +T +K +N+ LK ++
Sbjct: 65 EDLNPKTF-IRKQLDNEELGLKEIR 88
>emb|CAC21724.1| (AJ292256) twin arginine translocation complex component
[Streptomyces lividans]
Length = 158
Score = 40.4 bits (93), Expect = 0.007
Identities = 20/85 (23%), Positives = 47/85 (54%), Gaps = 8/85 (9%)
Query: 4 MGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTLDKEI-------NI 56
+G E++ ++V+A++ GP+K P+ + DV + R +++ + AK + +E+
Sbjct: 5 IGALELVTLVVLAVLVFGPDKLPKVIQDVTRTIRKIREFSDSAKQDIRQELGPEFKDFEF 64
Query: 57 EEIKKETLEYQKLFENKVESLKGVK 81
E++ +T +K +N+ LK ++
Sbjct: 65 EDLNPKTF-IRKQLDNEELGLKEIR 88
>ref|NP_057279.1| (NM_016195) M-phase phosphoprotein 1; mitotic kinesin-like protein
[Homo sapiens]
pir||T17272 hypothetical protein DKFZp434B0435.1 - human
emb|CAB55962.1| (AL117496) hypothetical protein [Homo sapiens]
Length = 1780
Score = 40.0 bits (92), Expect = 0.009
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 47 KDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEE--LEDAKVTAENEIKSIQDLMQ 104
+D L+KE I ++++ E+Q+ ++ V++ K + ++E L++ N ++ ++ L+Q
Sbjct: 1145 QDILEKESIILKLERNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQ 1204
Query: 105 DYQKSLETNTIPNH-LNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKE 158
++ ETN L EE+S A + + +D KE A D K D +K+
Sbjct: 1205 LKEEEEETNRQETEKLKEELSASSARTQNLKADLQRKEEDYA-DLKEKLTDAKKQ 1258
>gb|AAK15626.1|AF323443_1 (AF323443) 235 kDa rhoptry protein [Plasmodium yoelii yoelii]
Length = 2747
Score = 40.0 bits (92), Expect = 0.009
Identities = 32/138 (23%), Positives = 71/138 (51%), Gaps = 17/138 (12%)
Query: 30 VDVVKFFRAVKKTLNDAKDTLDKEIN-----IEEIKKETLEYQKLFENKV---ESLKGVK 81
V+ +K + + T D K + +EIN I +I+K+ +K+ + + ++L +
Sbjct: 1152 VEGIKKKQQIIVTKIDKKKNIYEEINKLLSEISKIEKDNTSLEKVKDINLSYGQNLGNLF 1211
Query: 82 IEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKE 141
+E++++ K AEN IKS++ + D + + + E+ + +NKE+ +
Sbjct: 1212 LEQIDEEKKKAENTIKSMEAYIDDLDNIKKKS---QEIETEMDIKMDINKEMEA------ 1262
Query: 142 VQLATDNNTKEHDKEKEN 159
++++ D++ K HDK K +
Sbjct: 1263 LKISHDDDKKCHDKSKNH 1280
>dbj|BAB69456.1| (AB033337) mitotic kinesin-related protein [Homo sapiens]
Length = 1820
Score = 40.0 bits (92), Expect = 0.009
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 47 KDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEE--LEDAKVTAENEIKSIQDLMQ 104
+D L+KE I ++++ E+Q+ ++ V++ K + ++E L++ N ++ ++ L+Q
Sbjct: 1185 QDILEKESIILKLERNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQ 1244
Query: 105 DYQKSLETNTIPNH-LNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKE 158
++ ETN L EE+S A + + +D KE A D K D +K+
Sbjct: 1245 LKEEEEETNRQETEKLKEELSASSARTQNLKADLQRKEEDYA-DLKEKLTDAKKQ 1298
>pir||T46451 hypothetical protein DKFZp434I152.1 - human (fragment)
emb|CAB70720.1| (AL137392) hypothetical protein [Homo sapiens]
Length = 1206
Score = 40.0 bits (92), Expect = 0.009
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 47 KDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEE--LEDAKVTAENEIKSIQDLMQ 104
+D L+KE I ++++ E+Q+ ++ V++ K + ++E L++ N ++ ++ L+Q
Sbjct: 571 QDILEKESIILKLERNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQ 630
Query: 105 DYQKSLETNTIPNH-LNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKE 158
++ ETN L EE+S A + + +D KE A D K D +K+
Sbjct: 631 LKEEEEETNRQETEKLKEELSASSARTQNLKADLQRKEEDYA-DLKEKLTDAKKQ 684
>ref|NP_071582.1| (NM_022246) RAD50 homolog (S. cerevisiae) [Rattus norvegicus]
gb|AAF91229.1|AF218576_1 (AF218576) Rad50 [Rattus norvegicus]
Length = 1312
Score = 40.0 bits (92), Expect = 0.009
Identities = 33/133 (24%), Positives = 69/133 (51%), Gaps = 15/133 (11%)
Query: 23 EKFPQAVVDVVKFFRAVKKTLNDAKDTLDK-EINIEEIK--KETLEYQKLFENKVESLKG 79
++ + V++ +++ + + DAK+ ++ EI +E+++ KE L ++K NK+
Sbjct: 885 QQMEEQTVELSTEVQSLNREIKDAKEQINPLEIALEKLQQEKEELIHRKNTSNKMAQ--- 941
Query: 80 VKIEELEDAKVTAENEIKSIQDLMQD------YQKSLETNTIPNHLNEEVSNEEALNKEV 133
KI ++++ +K I++ +QD QK E N + LNE ++E +NKE+
Sbjct: 942 DKINDIKEKVKNIHGYMKDIENYIQDGKDDYKKQKETELNEVVIQLNECDKHKEKINKEM 1001
Query: 134 SS---DESPKEVQ 143
+ D K++Q
Sbjct: 1002 GTMRQDIDTKKIQ 1014
>dbj|BAB15043.1| (AK024959) unnamed protein product [Homo sapiens]
Length = 696
Score = 40.0 bits (92), Expect = 0.009
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 47 KDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEE--LEDAKVTAENEIKSIQDLMQ 104
+D L+KE I ++++ E+Q+ ++ V++ K + ++E L++ N ++ ++ L+Q
Sbjct: 396 QDILEKESIILKLERNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQ 455
Query: 105 DYQKSLETNTIPNH-LNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKE 158
++ ETN L EE+S A + + +D KE A D K D +K+
Sbjct: 456 LKEEEEETNRQETEKLKEELSASSARTQNLKADLQRKEEDYA-DLKEKLTDAKKQ 509
>ref|NP_487918.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB75577.1| (AP003594) ORF_ID:asr3878~hypothetical protein [Nostoc sp. PCC
7120]
Length = 93
Score = 40.0 bits (92), Expect = 0.009
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 10/63 (15%)
Query: 1 MFGMGFFEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLNDAKDTL---DKEINIE 57
MFG+G+ EI +++VVA++ GP+K P+ A+ KTL KD L ++ N E
Sbjct: 38 MFGLGWPEIAIIVVVAVVIFGPKKIPE-------LGSALGKTLRGFKDELKTPSEDTNPE 90
Query: 58 EIK 60
E K
Sbjct: 91 EEK 93
>gb|AAB88727.1| (U93121) M-phase phosphoprotein-1 [Homo sapiens]
Length = 753
Score = 40.0 bits (92), Expect = 0.009
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 47 KDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEE--LEDAKVTAENEIKSIQDLMQ 104
+D L+KE I ++++ E+Q+ ++ V++ K + ++E L++ N ++ ++ L+Q
Sbjct: 118 QDILEKESIILKLERNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQ 177
Query: 105 DYQKSLETNTIPNH-LNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKE 158
++ ETN L EE+S A + + +D KE A D K D +K+
Sbjct: 178 LKEEEEETNRQETEKLKEELSASSARTQNLKADLQRKEEDYA-DLKEKLTDAKKQ 231
>gb|AAM33706.1| (AC117076) K08H10.2A PROTEIN. 6/100 [Dictyostelium discoideum]
Length = 247
Score = 40.0 bits (92), Expect = 0.009
Identities = 42/154 (27%), Positives = 65/154 (41%), Gaps = 4/154 (2%)
Query: 7 FEILVVLVVAIIFLGPEKFPQAVVDVVKFFRAVKKTLND-AKDTLDKEINIEEIKKETLE 65
+E L II + Q D K VK+T N+ D K +++E +E
Sbjct: 82 YETLKTKTNEIISGAIDNSEQVKEDGSKKVEDVKETANEITNDLKQKSEDLKEDASNKVE 141
Query: 66 YQKLFENKVESLKGVKIEEL-EDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEVS 124
K N++ + K E+L ED E +L D +K E I + N++V
Sbjct: 142 EAKDKANEITNDLNKKGEDLKEDGSKKYEEAKDKASELTTDLKKKGED--IVDDANDKVE 199
Query: 125 NEEALNKEVSSDESPKEVQLATDNNTKEHDKEKE 158
+ EVS+D K +L+ D N K +D +KE
Sbjct: 200 QLKVKGTEVSNDLKKKSDELSNDLNEKYNDTKKE 233
>ref|XP_005803.4| (XM_005803) M-phase phosphoprotein 1 [Homo sapiens]
Length = 1820
Score = 40.0 bits (92), Expect = 0.009
Identities = 30/115 (26%), Positives = 60/115 (52%), Gaps = 4/115 (3%)
Query: 47 KDTLDKEINIEEIKKETLEYQKLFENKVESLKGVKIEE--LEDAKVTAENEIKSIQDLMQ 104
+D L+KE I ++++ E+Q+ ++ V++ K + ++E L++ N ++ ++ L+Q
Sbjct: 1185 QDILEKESIILKLERNLKEFQEHLQDSVKNTKDLNVKELKLKEEITQLTNNLQDMKHLLQ 1244
Query: 105 DYQKSLETNTIPNH-LNEEVSNEEALNKEVSSDESPKEVQLATDNNTKEHDKEKE 158
++ ETN L EE+S A + + +D KE A D K D +K+
Sbjct: 1245 LKEEEEETNRQETEKLKEELSASSARTQNLKADLQRKEEDYA-DLKEKLTDAKKQ 1298
>pir||T28677 rhoptry protein - Plasmodium yoelii
gb|AAA21304.1| (L27838) rhoptry protein [Plasmodium yoelii]
Length = 2269
Score = 40.0 bits (92), Expect = 0.009
Identities = 32/138 (23%), Positives = 71/138 (51%), Gaps = 17/138 (12%)
Query: 30 VDVVKFFRAVKKTLNDAKDTLDKEIN-----IEEIKKETLEYQKLFENKV---ESLKGVK 81
V+ +K + + T D K + +EIN I +I+K+ +K+ + + ++L +
Sbjct: 677 VEGIKKKQQIIVTKIDKKKNIYEEINKLLSEISKIEKDNTSLEKVKDINLSYGQNLGNLF 736
Query: 82 IEELEDAKVTAENEIKSIQDLMQDYQKSLETNTIPNHLNEEVSNEEALNKEVSSDESPKE 141
+E++++ K AEN IKS++ + D + + + E+ + +NKE+ +
Sbjct: 737 LEQIDEEKKKAENTIKSMEAYIDDLDNIKKKS---QEIETEMDIKMDINKEMEA------ 787
Query: 142 VQLATDNNTKEHDKEKEN 159
++++ D++ K HDK K +
Sbjct: 788 LKISHDDDKKCHDKSKNH 805
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.309 0.130 0.333
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,423,941
Number of Sequences: 1026957
Number of extensions: 3463710
Number of successful extensions: 24579
Number of sequences better than 1.0e-02: 77
Number of HSP's better than 0.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 24249
Number of HSP's gapped (non-prelim): 292
length of query: 160
length of database: 324,149,939
effective HSP length: 111
effective length of query: 49
effective length of database: 210,157,712
effective search space: 10297727888
effective search space used: 10297727888
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 92 (40.0 bits)