BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645692|ref|NP_207869.1| hypothetical protein
[Helicobacter pylori 26695]
(228 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207869.1| (NC_000915) hypothetical protein [Helicoba... 462 e-129
ref|NP_223066.1| (NC_000921) putative [Helicobacter pylori ... 177 6e-44
ref|NP_224180.1| (NC_000921) putative [Helicobacter pylori ... 51 9e-06
ref|NP_473180.1| (NC_000521) predicted using hexExon; MAL3P... 46 3e-04
emb|CAB39003.2| (AL034558) Hypothetical protein, PFC0235w [... 46 3e-04
gb|AAK15625.1|AF323442_1 (AF323442) 235 kDa rhoptry protein... 44 0.001
gb|AAG29552.1|AF315277_1 (AF315277) p235 rhoptry protein [P... 41 0.009
gb|AAG29561.1|AF315286_1 (AF315286) p235 rhoptry protein [P... 41 0.009
gb|AAB41263.3| (U36927) rhoptry protein [Plasmodium yoelii] 41 0.009
gb|AAG29560.1|AF315285_1 (AF315285) p235 rhoptry protein [P... 41 0.009
gb|AAG29556.1|AF315281_1 (AF315281) p235 rhoptry protein [P... 41 0.009
gb|AAF21443.1|U09839_1 (U09839) sequestrin [Plasmodium falc... 41 0.009
gb|AAG29559.1|AF315284_1 (AF315284) p235 rhoptry protein [P... 41 0.009
pir||T28676 rhoptry protein - Plasmodium yoelii (fragment) 41 0.009
gb|AAG29555.1|AF315280_1 (AF315280) p235 rhoptry protein [P... 41 0.009
pir||T28677 rhoptry protein - Plasmodium yoelii >gi|457146|... 41 0.009
>ref|NP_207869.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||F64654 hypothetical protein HP1078 - Helicobacter pylori (strain 26695)
gb|AAD08124.1| (AE000614) H. pylori predicted coding region HP1078 [Helicobacter
pylori 26695]
Length = 228
Score = 462 bits (1189), Expect = e-129
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MADKEILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIEKYDKTLI 60
MADKEILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIEKYDKTLI
Sbjct: 1 MADKEILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIEKYDKTLI 60
Query: 61 IFDADKDYESNKKEILKIVSESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINCF 120
IFDADKDYESNKKEILKIVSESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINCF
Sbjct: 61 IFDADKDYESNKKEILKIVSESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINCF 120
Query: 121 ESYLDCIKKKEHYKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGD 180
ESYLDCIKKKEHYKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGD
Sbjct: 121 ESYLDCIKKKEHYKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGD 180
Query: 181 EIEIKDQYKGDYEELKKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF 228
EIEIKDQYKGDYEELKKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF
Sbjct: 181 EIEIKDQYKGDYEELKKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF 228
>ref|NP_223066.1| (NC_000921) putative [Helicobacter pylori J99]
pir||E71943 hypothetical protein jhp0347 - Helicobacter pylori (strain J99)
gb|AAD05930.1| (AE001470) putative [Helicobacter pylori J99]
Length = 167
Score = 177 bits (450), Expect = 6e-44
Identities = 98/179 (54%), Positives = 119/179 (65%), Gaps = 24/179 (13%)
Query: 60 IIFDAD---------KDYESNKKEILKIVSESKQTISEEQIFLFPNNQDDGDLETLLLKI 110
IIFDAD +++ K I + E +EQIFLFPNNQDDGDLETLLL+I
Sbjct: 3 IIFDADIKKENQESDAGFDNKLKHIREKFKEKGTDFPKEQIFLFPNNQDDGDLETLLLEI 62
Query: 111 ANHKEFINCFESYLDCIKKKEHYKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKK 170
A H EF+ CFE YL+CIK KEHYKPIKNIRK+ YAYLEALGLE K
Sbjct: 63 AKHDEFLKCFEGYLECIKSKEHYKPIKNIRKNMLYAYLEALGLENL-----------TKT 111
Query: 171 KLIIDDKDGDEIEIKDQYKGDYEEL-KKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF 228
+ + D G +IK +Y+ +Y++L ++V+D +S SLIPLKNFLGQFAEN QKTNPKIF
Sbjct: 112 NIDVFDSKG---KIKSRYEENYKKLTEEVIDFSSNSLIPLKNFLGQFAENKQKTNPKIF 167
>ref|NP_224180.1| (NC_000921) putative [Helicobacter pylori J99]
pir||F71803 hypothetical protein jhp1462 - Helicobacter pylori (strain J99)
gb|AAD07037.1| (AE001568) putative [Helicobacter pylori J99]
Length = 176
Score = 51.2 bits (121), Expect = 9e-06
Identities = 46/161 (28%), Positives = 79/161 (48%), Gaps = 23/161 (14%)
Query: 4 KEILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIE---KYDKTLI 60
+E ++VEG SDK+FL + L ++ +K+ + N KD LS+ I+ K I
Sbjct: 2 REKFVYVEGESDKIFLTI-LNEVKNLGLKDSNIINCGSKDKLSEEAESIKGNLKAKDIYI 60
Query: 61 IFDADKDYESNK-KEILKIVSE--------SKQTISEEQIFLFPNNQDDG------DLET 105
+FD+D + K +EI K + E + + ++ +IFL P N + +LE
Sbjct: 61 VFDSDNQTKETKIQEIKKQLQENTKQEHRLNDEEFNQIKIFLLPENDETKHHPNYCELEP 120
Query: 106 LLLKIA---NHKEFINCF-ESYLDCIKKKEHYKPIKNIRKS 142
LL K+A +K F F + Y + + KPI++ +K+
Sbjct: 121 LLEKMAKESENKAFYTSFRQHYNTLFNEVKQIKPIQSEQKN 161
>ref|NP_473180.1| (NC_000521) predicted using hexExon; MAL3P2.16 (PF0235w),
Hypothetical protein, len: 1214 aa [Plasmodium
falciparum]
Length = 1213
Score = 46.2 bits (108), Expect = 3e-04
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 6 ILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIE-KYDKTLIIF-- 62
+L+ ++ D F+ F E+FP K +++ +D K +LE++ K L I
Sbjct: 778 LLVCIKQNDDNFFVIPNCIFDEKFPGLQKKTESMIIQDIHEKEILELKNKQMNELYILKK 837
Query: 63 ---DADKDYESNKKEILKIVSESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINC 119
D K+YE KK++ +++E+ + + + +++ L + +KE +N
Sbjct: 838 EKEDIYKEYEEYKKKVTSLINETNYNYKNIE-------EKENEIKELNNTLNKYKEEMNN 890
Query: 120 FESYLDCIKKKEHYKPI-----KNIRKS--------KWYAYLEALGLEKFF--QYTWDTK 164
++ + I +K I KNIR K E + LEK + QY +T+
Sbjct: 891 YKEEIIVINEKYKLLEIELCKEKNIRDQQNVGISDLKKKMLKEKIELEKKYKEQYEKETQ 950
Query: 165 KKNNKKKLIIDDKDGDEIEIKDQYKGDYEELKKVLDLNSKSLIPLKN 211
+K N K+I D+K E ++DQ +++K+ N + ++N
Sbjct: 951 QKINDMKIIFDNK---EKILQDQIDDLLHKIEKLTFSNDEKTKTIEN 994
>emb|CAB39003.2| (AL034558) Hypothetical protein, PFC0235w [Plasmodium falciparum
3D7]
Length = 1139
Score = 46.2 bits (108), Expect = 3e-04
Identities = 53/227 (23%), Positives = 102/227 (44%), Gaps = 31/227 (13%)
Query: 6 ILIFVEGPSDKVFLEVYLYFLERFPIKNFKVQNVDGKDNLSKRLLEIE-KYDKTLIIF-- 62
+L+ ++ D F+ F E+FP K +++ +D K +LE++ K L I
Sbjct: 704 LLVCIKQNDDNFFVIPNCIFDEKFPGLQKKTESMIIQDIHEKEILELKNKQMNELYILKK 763
Query: 63 ---DADKDYESNKKEILKIVSESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINC 119
D K+YE KK++ +++E+ + + + +++ L + +KE +N
Sbjct: 764 EKEDIYKEYEEYKKKVTSLINETNYNYKNIE-------EKENEIKELNNTLNKYKEEMNN 816
Query: 120 FESYLDCIKKKEHYKPI-----KNIRKS--------KWYAYLEALGLEKFF--QYTWDTK 164
++ + I +K I KNIR K E + LEK + QY +T+
Sbjct: 817 YKEEIIVINEKYKLLEIELCKEKNIRDQQNVGISDLKKKMLKEKIELEKKYKEQYEKETQ 876
Query: 165 KKNNKKKLIIDDKDGDEIEIKDQYKGDYEELKKVLDLNSKSLIPLKN 211
+K N K+I D+K E ++DQ +++K+ N + ++N
Sbjct: 877 QKINDMKIIFDNK---EKILQDQIDDLLHKIEKLTFSNDEKTKTIEN 920
>gb|AAK15625.1|AF323442_1 (AF323442) 235 kDa rhoptry protein [Plasmodium yoelii yoelii]
Length = 2752
Score = 43.9 bits (102), Expect = 0.001
Identities = 46/196 (23%), Positives = 79/196 (39%), Gaps = 34/196 (17%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKD-YESNKKEILKIVSESKQTISEEQI 91
N K++N++ N K+ EI +K I A+KD ES KK I+ + + +
Sbjct: 1664 NSKIENIESNVNQHKKNYEIGIVEKINEIAKANKDQIESTKKLIIPTIENLTSSFKTNDL 1723
Query: 92 FLFPNNQDDGDLETLLLKIANH-KEFINCFESYLDCIKK----------------KEHYK 134
++ G + K N E N YL+ + K KE K
Sbjct: 1724 GGIDTXENLGTYNKEMNKTYNEFMESYNLIVDYLETVSKESITYGEIKNKRISTQKELLK 1783
Query: 135 PIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEIEIKDQYKGDYEE 194
I+N+ K+K +YL+ + +F + KKK N ++ D++ +Y +
Sbjct: 1784 SIENVNKAK--SYLDDIETNEFDRIVTHFKKKIN--------------DVNDKFTNEYSK 1827
Query: 195 LKKVLDLNSKSLIPLK 210
+ K D S S+ +K
Sbjct: 1828 VNKGFDNISNSINNVK 1843
>gb|AAG29552.1|AF315277_1 (AF315277) p235 rhoptry protein [Plasmodium yoelii yoelii]
Length = 432
Score = 41.2 bits (95), Expect = 0.009
Identities = 45/199 (22%), Positives = 86/199 (42%), Gaps = 38/199 (19%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKDYESNKKEILK-IVSESKQTISEEQI 91
N K++N++ N K+ EI +K I +K+ + KE++K + + + +
Sbjct: 2 NSKIKNIENTVNQHKKNYEIGIVEKINEIAKTNKNQIESTKELIKPTIQHIISSFNANDL 61
Query: 92 FLFPNNQDDGDLETLLLKIANHKEFI---NCFESYLDCIKK----------------KEH 132
++++ G T + I ++EFI N +YL+ + K KE
Sbjct: 62 EGIDSDENLGKYNTEMGNI--YEEFIKSYNLITNYLETVSKESITYNQIQNKRIDTQKEL 119
Query: 133 YKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEIEIKDQYKGDY 192
K I+N+ K+K +YL+ + +F + KKK N + D +K +Y
Sbjct: 120 LKNIENVNKAK--SYLDYIKENEFDRIVTHFKKKLN--------------TVNDNFKNEY 163
Query: 193 EELKKVLDLNSKSLIPLKN 211
++ + D S S+ +KN
Sbjct: 164 SKVNEGFDNISNSINTVKN 182
>gb|AAG29561.1|AF315286_1 (AF315286) p235 rhoptry protein [Plasmodium yoelii yoelii]
Length = 432
Score = 41.2 bits (95), Expect = 0.009
Identities = 45/199 (22%), Positives = 86/199 (42%), Gaps = 38/199 (19%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKDYESNKKEILK-IVSESKQTISEEQI 91
N K++N++ N K+ EI +K I +K+ + KE++K + + + +
Sbjct: 2 NSKIKNIENTVNQHKKNYEIGIVEKINEIAKTNKNQIESTKELIKPTIQHIISSFNANDL 61
Query: 92 FLFPNNQDDGDLETLLLKIANHKEFI---NCFESYLDCIKK----------------KEH 132
++++ G T + I ++EFI N +YL+ + K KE
Sbjct: 62 EGIDSDENLGKYNTEMGNI--YEEFIKSYNLITNYLETVSKESITYNQIQNKRIDTQKEL 119
Query: 133 YKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEIEIKDQYKGDY 192
K I+N+ K+K +YL+ + +F + KKK N + D +K +Y
Sbjct: 120 LKNIENVNKAK--SYLDYIKENEFDRIVTHFKKKLN--------------TVNDNFKNEY 163
Query: 193 EELKKVLDLNSKSLIPLKN 211
++ + D S S+ +KN
Sbjct: 164 SKVNEGFDNISNSINTVKN 182
>gb|AAB41263.3| (U36927) rhoptry protein [Plasmodium yoelii]
Length = 2771
Score = 41.2 bits (95), Expect = 0.009
Identities = 46/195 (23%), Positives = 82/195 (41%), Gaps = 32/195 (16%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKD-YESNKKEILKIVSESKQTISEEQI 91
N K++N++ N K+ EI +K I A+KD ES +K I+ + +
Sbjct: 1682 NSKIKNIESNVNQHKKNYEIGIVEKINEIAKANKDQIESTQKLIIPTIKNLISPFKANDL 1741
Query: 92 FLFPNNQDDGDLETLLLKIANHKEFINCFE---SYLDCIKKKE-HYKPIKNIRKSKWYAY 147
N++ G T + I ++EFI ++ YL+ + K+ Y+ IKN R +
Sbjct: 1742 EGIDTNKNLGKYNTEMNNI--YEEFIKSYDLITHYLETVSKEPITYEQIKNKRITAQNEL 1799
Query: 148 LEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEI------------EIKDQYKGDYEEL 195
L + K NK K +DD + +E ++ D++ +Y ++
Sbjct: 1800 LTNI-------------KNVNKAKSYLDDIEANEFDRIVTHFKNKLNDVNDKFTNEYSKV 1846
Query: 196 KKVLDLNSKSLIPLK 210
K D S S+ +K
Sbjct: 1847 NKGFDNISNSINNVK 1861
>gb|AAG29560.1|AF315285_1 (AF315285) p235 rhoptry protein [Plasmodium yoelii yoelii]
Length = 440
Score = 41.2 bits (95), Expect = 0.009
Identities = 46/195 (23%), Positives = 82/195 (41%), Gaps = 32/195 (16%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKD-YESNKKEILKIVSESKQTISEEQI 91
N K++N++ N K+ EI +K I A+KD ES +K I+ + +
Sbjct: 2 NSKIKNIESNVNQHKKNYEIGIVEKINEIAKANKDQIESTQKLIIPTIKNLISPFKANDL 61
Query: 92 FLFPNNQDDGDLETLLLKIANHKEFINCFE---SYLDCIKKKE-HYKPIKNIRKSKWYAY 147
N++ G T + I ++EFI ++ YL+ + K+ Y+ IKN R +
Sbjct: 62 EGIDTNKNLGKYNTEMNNI--YEEFIKSYDLITHYLETVSKEPITYEQIKNKRITAQNEL 119
Query: 148 LEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEI------------EIKDQYKGDYEEL 195
L + K NK K +DD + +E ++ D++ +Y ++
Sbjct: 120 LTNI-------------KNVNKAKSYLDDIEANEFDRIVTHFKNKLNDVNDKFTNEYSKV 166
Query: 196 KKVLDLNSKSLIPLK 210
K D S S+ +K
Sbjct: 167 NKGFDNISNSINNVK 181
>gb|AAG29556.1|AF315281_1 (AF315281) p235 rhoptry protein [Plasmodium yoelii yoelii]
Length = 440
Score = 41.2 bits (95), Expect = 0.009
Identities = 46/195 (23%), Positives = 82/195 (41%), Gaps = 32/195 (16%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKD-YESNKKEILKIVSESKQTISEEQI 91
N K++N++ N K+ EI +K I A+KD ES +K I+ + +
Sbjct: 2 NSKIKNIESNVNQHKKNYEIGIVEKINEIAKANKDQIESTQKLIIPTIKNLISPFKANDL 61
Query: 92 FLFPNNQDDGDLETLLLKIANHKEFINCFE---SYLDCIKKKE-HYKPIKNIRKSKWYAY 147
N++ G T + I ++EFI ++ YL+ + K+ Y+ IKN R +
Sbjct: 62 EGIDTNKNLGKYNTEMNNI--YEEFIKSYDLITHYLETVSKEPITYEQIKNKRITAQNEL 119
Query: 148 LEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEI------------EIKDQYKGDYEEL 195
L + K NK K +DD + +E ++ D++ +Y ++
Sbjct: 120 LTNI-------------KNVNKAKSYLDDIEANEFDRIVTHFKNKLNDVNDKFTNEYSKV 166
Query: 196 KKVLDLNSKSLIPLK 210
K D S S+ +K
Sbjct: 167 NKGFDNISNSINNVK 181
>gb|AAF21443.1|U09839_1 (U09839) sequestrin [Plasmodium falciparum]
Length = 652
Score = 41.2 bits (95), Expect = 0.009
Identities = 51/237 (21%), Positives = 98/237 (40%), Gaps = 34/237 (14%)
Query: 21 VYLYFLERFPIKNFKV----QNVDGKDNLSKRLLEIEKYDKTLIIFDADKDYESNKKEIL 76
+Y ++E KN K + KD K+ ++I K K I D D D + +K +
Sbjct: 177 IYSMYIEDISNKNIKDLIKNEKETNKDKNKKKDIDINKKKKKDIDIDVDIDKDIHKDHVE 236
Query: 77 KIVSESKQTISEEQIFLFPNNQDDGDLETLLLKIANHKEFINCFESYLDCI-------KK 129
++ E K +S+E++ + D L + L+ + + YL+ + K+
Sbjct: 237 ELYGEVKNKLSKEEL----DRMDRDALYRVYLEELDRMNRDELYRVYLEELEKIDKEEKE 292
Query: 130 KEHYKPIKNIRKSKWYAYLEALGLEKFFQ---YTWDTKKKNNKKKLIIDDKDGDEI---- 182
K H + + I K K ++ ++K ++ D+ + + ++ I+ D ++I
Sbjct: 293 KIHREKLHKIEKEK-INKMDKDQIDKIYEEELNKMDSDEIQHVRRAILQDIQKEKIQNLE 351
Query: 183 --EIKDQYKGD---------YEELKKVLDLNSKSLIPLKNFLGQFAENNQKTNPKIF 228
EI YK + YE + L N K I +N + + N+K N +F
Sbjct: 352 LEEIDRLYKEELDRMDREARYEIPMRNLSRNEKDNIIHRNIKNESNQKNKKENVNVF 408
>gb|AAG29559.1|AF315284_1 (AF315284) p235 rhoptry protein [Plasmodium yoelii yoelii]
Length = 432
Score = 41.2 bits (95), Expect = 0.009
Identities = 45/199 (22%), Positives = 86/199 (42%), Gaps = 38/199 (19%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKDYESNKKEILK-IVSESKQTISEEQI 91
N K++N++ N K+ EI +K I +K+ + KE++K + + + +
Sbjct: 2 NSKIKNIENTVNQHKKNYEIGIVEKINEIAKTNKNQIESTKELIKPTIQHIISSFNANDL 61
Query: 92 FLFPNNQDDGDLETLLLKIANHKEFI---NCFESYLDCIKK----------------KEH 132
++++ G T + I ++EFI N +YL+ + K KE
Sbjct: 62 EGIDSDENLGKYNTEMGNI--YEEFIKSYNLITNYLETVSKESITYNQIQNKRIDTQKEL 119
Query: 133 YKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEIEIKDQYKGDY 192
K I+N+ K+K +YL+ + +F + KKK N + D +K +Y
Sbjct: 120 LKNIENVNKAK--SYLDYIKENEFDRIVTHFKKKLN--------------TVNDNFKNEY 163
Query: 193 EELKKVLDLNSKSLIPLKN 211
++ + D S S+ +KN
Sbjct: 164 SKVNEGFDNISNSINTVKN 182
>pir||T28676 rhoptry protein - Plasmodium yoelii (fragment)
Length = 2401
Score = 41.2 bits (95), Expect = 0.009
Identities = 46/195 (23%), Positives = 82/195 (41%), Gaps = 32/195 (16%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKD-YESNKKEILKIVSESKQTISEEQI 91
N K++N++ N K+ EI +K I A+KD ES +K I+ + +
Sbjct: 1312 NSKIKNIESNVNQHKKNYEIGIVEKINEIAKANKDQIESTQKLIIPTIKNLISPFKANDL 1371
Query: 92 FLFPNNQDDGDLETLLLKIANHKEFINCFE---SYLDCIKKKE-HYKPIKNIRKSKWYAY 147
N++ G T + I ++EFI ++ YL+ + K+ Y+ IKN R +
Sbjct: 1372 EGIDTNKNLGKYNTEMNNI--YEEFIKSYDLITHYLETVSKEPITYEQIKNKRITAQNEL 1429
Query: 148 LEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEI------------EIKDQYKGDYEEL 195
L + K NK K +DD + +E ++ D++ +Y ++
Sbjct: 1430 LTNI-------------KNVNKAKSYLDDIEANEFDRIVTHFKNKLNDVNDKFTNEYSKV 1476
Query: 196 KKVLDLNSKSLIPLK 210
K D S S+ +K
Sbjct: 1477 NKGFDNISNSINNVK 1491
>gb|AAG29555.1|AF315280_1 (AF315280) p235 rhoptry protein [Plasmodium yoelii yoelii]
Length = 432
Score = 41.2 bits (95), Expect = 0.009
Identities = 45/199 (22%), Positives = 86/199 (42%), Gaps = 38/199 (19%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKDYESNKKEILK-IVSESKQTISEEQI 91
N K++N++ N K+ EI +K I +K+ + KE++K + + + +
Sbjct: 2 NSKIKNIENTVNQHKKNYEIGIVEKINEIAKTNKNQIESTKELIKPTIQHIISSFNANDL 61
Query: 92 FLFPNNQDDGDLETLLLKIANHKEFI---NCFESYLDCIKK----------------KEH 132
++++ G T + I ++EFI N +YL+ + K KE
Sbjct: 62 EGIDSDENLGKYNTEMGNI--YEEFIKSYNLITNYLETVSKESITYNQIQNKRIDTQKEL 119
Query: 133 YKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEIEIKDQYKGDY 192
K I+N+ K+K +YL+ + +F + KKK N + D +K +Y
Sbjct: 120 LKNIENVNKAK--SYLDYIKENEFDRIVTHFKKKLN--------------TVNDNFKNEY 163
Query: 193 EELKKVLDLNSKSLIPLKN 211
++ + D S S+ +KN
Sbjct: 164 SKVNEGFDNISNSINTVKN 182
>pir||T28677 rhoptry protein - Plasmodium yoelii
gb|AAA21304.1| (L27838) rhoptry protein [Plasmodium yoelii]
Length = 2269
Score = 41.2 bits (95), Expect = 0.009
Identities = 45/199 (22%), Positives = 86/199 (42%), Gaps = 38/199 (19%)
Query: 33 NFKVQNVDGKDNLSKRLLEIEKYDKTLIIFDADKDYESNKKEILK-IVSESKQTISEEQI 91
N K++N++ N K+ EI +K I +K+ + KE++K + + + +
Sbjct: 1189 NSKIKNIENTVNQHKKNYEIGIVEKINEIAKTNKNQIESTKELIKPTIQHIISSFNANDL 1248
Query: 92 FLFPNNQDDGDLETLLLKIANHKEFI---NCFESYLDCIKK----------------KEH 132
++++ G T + I ++EFI N +YL+ + K KE
Sbjct: 1249 EGIDSDENLGKYNTEMGNI--YEEFIKSYNLITNYLETVSKESITYNQIQNKRIDTQKEL 1306
Query: 133 YKPIKNIRKSKWYAYLEALGLEKFFQYTWDTKKKNNKKKLIIDDKDGDEIEIKDQYKGDY 192
K I+N+ K+K +YL+ + +F + KKK N + D +K +Y
Sbjct: 1307 LKNIENVNKAK--SYLDYIKENEFDRIVTHFKKKLN--------------TVNDNFKNEY 1350
Query: 193 EELKKVLDLNSKSLIPLKN 211
++ + D S S+ +KN
Sbjct: 1351 SKVNEGFDNISNSINTVKN 1369
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.316 0.139 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 151,791,831
Number of Sequences: 1026957
Number of extensions: 6826345
Number of successful extensions: 24907
Number of sequences better than 1.0e-02: 16
Number of HSP's better than 0.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 24883
Number of HSP's gapped (non-prelim): 31
length of query: 228
length of database: 324,149,939
effective HSP length: 117
effective length of query: 111
effective length of database: 203,995,970
effective search space: 22643552670
effective search space used: 22643552670
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 95 (41.2 bits)