BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645712|ref|NP_207889.1| conserved hypothetical
secreted protein [Helicobacter pylori 26695]
(290 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207889.1| (NC_000915) conserved hypothetical secrete... 605 e-172
ref|NP_223741.1| (NC_000921) putative [Helicobacter pylori ... 595 e-169
gb|AAM66156.1|AF326634_1 (AF326634) JHP1437-like protein [H... 278 4e-74
ref|NP_222918.1| (NC_000921) putative [Helicobacter pylori ... 278 5e-74
gb|AAC24210.1| (AF053708) cysteine-rich protein; HcpA [Heli... 278 7e-74
gb|AAB63298.1| (AF008565) Orf2 [Helicobacter pylori] 277 9e-74
ref|NP_207009.1| (NC_000915) conserved hypothetical secrete... 276 1e-73
gb|AAM66150.1|AF326629_1 (AF326629) JHP1437-like protein [H... 265 4e-70
gb|AAM66155.1|AF326633_1 (AF326633) JHP1437-like protein [H... 261 6e-69
ref|NP_223037.1| (NC_000921) putative [Helicobacter pylori ... 254 1e-66
gb|AAM66149.1|AF326628_1 (AF326628) JHP1437-like protein [H... 234 8e-61
gb|AAL47062.1|AF326614_1 (AF326614) JHP318-like protein [He... 225 5e-58
ref|NP_206959.1| (NC_000915) conserved hypothetical secrete... 217 1e-55
ref|NP_222869.1| (NC_000921) putative [Helicobacter pylori ... 216 2e-55
gb|AAL47058.1|AF326608_1 (AF326608) JHP318-like protein [He... 211 1e-53
gb|AAL47059.1|AF326610_1 (AF326610) JHP318-like protein [He... 204 1e-51
ref|NP_224155.1| (NC_000921) putative [Helicobacter pylori ... 198 5e-50
gb|AAM66148.1|AF326627_1 (AF326627) JHP1437-like protein [H... 196 2e-49
gb|AAM66151.1|AF326630_1 (AF326630) JHP1437-like protein [H... 193 2e-48
ref|NP_222941.1| (NC_000921) putative [Helicobacter pylori ... 182 3e-45
ref|NP_207033.1| (NC_000915) conserved hypothetical secrete... 180 1e-44
gb|AAL47063.1|AF326616_1 (AF326616) JHP1024-like protein [H... 154 1e-36
gb|AAL47060.1|AF326611_1 (AF326611) JHP318-like protein [He... 149 5e-35
ref|NP_223289.1| (NC_000921) putative [Helicobacter pylori ... 124 2e-27
gb|AAB47276.1| (U86608) 29 kDa protein [Helicobacter pylori] 122 4e-27
ref|NP_207908.1| (NC_000915) conserved hypothetical secrete... 120 2e-26
ref|NP_223762.1| (NC_000921) putative [Helicobacter pylori ... 117 1e-25
ref|NP_207134.1| (NC_000915) hypothetical protein [Helicoba... 117 1e-25
ref|NP_459646.1| (NC_003197) putative TPR repeat protein [S... 105 4e-22
ref|NP_281603.1| (NC_002163) putative periplasmic protein [... 105 8e-22
gb|AAL83953.1|AF354056_1 (AF354056) temperature-induced pro... 104 1e-21
gb|EAA06387.1| (AAAB01008846) agCP13101 [Anopheles gambiae ... 98 1e-19
ref|NP_586349.1| (NC_003237) similarity to SKT5 PROTEIN [En... 97 2e-19
ref|NP_651179.1| (NM_142922) BcDNA:LD23587 gene product [Dr... 95 8e-19
gb|AAF45339.1| (AE003066) CG13865 gene product [Drosophila ... 95 1e-18
gb|AAD05210.1| (AF063095) SELlL [Mus musculus] >gi|20073079... 94 2e-18
ref|XP_127076.1| (XM_127076) similar to Sel-1 homolog precu... 94 2e-18
ref|NP_005056.3| (NM_005065) sel-1 suppressor of lin-12-lik... 94 2e-18
gb|AAF29413.1|AF052059_1 (AF052059) SEL1L [Homo sapiens] >g... 94 2e-18
dbj|BAB12403.1| (AB048195) SEL1L [Mesocricetus auratus] 94 2e-18
gb|AAD41587.1|AF057704_3 (AF057704) enhanced entry protein ... 93 3e-18
pir||T46587 hypothetical protein [imported] - Vogesella ind... 93 4e-18
ref|NP_415177.1| (NC_000913) orf, hypothetical protein [Esc... 92 7e-18
sp|P77234|YBEQ_ECOLI Hypothetical protein ybeQ 92 7e-18
ref|NP_207422.1| (NC_000915) hypothetical protein [Helicoba... 91 1e-17
ref|NP_286370.1| (NC_002655) ybeQ gene product [Escherichia... 88 1e-16
gb|AAF01236.1|AF185288_1 (AF185288) immunoreactive protein ... 87 2e-16
ref|NP_455743.1| (NC_003198) putative secreted protein [Sal... 86 5e-16
gb|AAH15313.1|AAH15313 (BC015313) hypothetical protein FLJ1... 86 5e-16
ref|NP_246550.1| (NC_002663) unknown [Pasteurella multocida... 86 6e-16
ref|NP_460716.1| (NC_003197) putative TPR repeat protein [S... 85 8e-16
ref|NP_075565.1| (NM_023077) hypothetical protein FLJ12439 ... 85 8e-16
ref|NP_506144.1| (NM_073743) Yeast hypothetical gene L8167.... 84 2e-15
gb|AAC47112.1| (U50828) sel-1 gene product [Caenorhabditis ... 84 2e-15
ref|XP_131544.1| (XM_131544) RIKEN cDNA 2010305A19 [Mus mus... 84 2e-15
ref|NP_564049.1| (NM_101684) expressed protein [Arabidopsis... 84 2e-15
ref|NP_273467.1| (NC_003112) conserved hypothetical protein... 83 3e-15
gb|AAK64159.1| (AY039982) unknown protein [Arabidopsis thal... 82 7e-15
dbj|BAB25716.1| (AK008518) data source:SPTR, source key:Q9H... 82 9e-15
emb|CAB65792.2| (AL109657) dJ842G6.2 (novel protein imilar ... 80 3e-14
ref|NP_177498.1| (NM_106015) hypothetical protein [Arabidop... 79 8e-14
ref|NP_284256.1| (NC_003116) hypothetical protein [Neisseri... 78 1e-13
ref|NP_420846.1| (NC_002696) conserved hypothetical protein... 77 2e-13
ref|XP_046437.2| (XM_046437) similar to dJ842G6.2 (novel pr... 74 1e-12
gb|AAC37164.1| (L05770) putative regulatory protein PobS [A... 74 2e-12
ref|NP_274346.1| (NC_003112) conserved hypothetical protein... 73 3e-12
ref|NP_459434.1| (NC_003197) putative TPR repeat protein [S... 72 5e-12
gb|EAA00460.1| (AAAB01008986) agCP9334 [Anopheles gambiae s... 72 5e-12
ref|NP_496487.1| (NM_064086) ZK20.4.p [Caenorhabditis elega... 72 7e-12
ref|NP_405544.1| (NC_003143) putative exported protein [Yer... 72 9e-12
ref|NP_541444.1| (NC_003318) TETRATRICOPEPTIDE REPEAT FAMIL... 71 2e-11
ref|NP_103302.1| (NC_002678) unknown protein [Mesorhizobium... 71 2e-11
ref|NP_596099.1| (NC_003423) very putative chitin synthase ... 67 2e-10
ref|XP_003620.2| (XM_003620) similar to hypothetical protei... 67 3e-10
ref|NP_518145.1| (NC_003295) PUTATIVE SIGNAL PEPTIDE PROTEI... 67 3e-10
dbj|BAA92563.1| (AB037746) KIAA1325 protein [Homo sapiens] 67 3e-10
ref|NP_060879.1| (NM_018409) hypothetical protein DKFZp761O... 67 3e-10
ref|NP_245305.1| (NC_002663) unknown [Pasteurella multocida... 67 3e-10
ref|NP_460954.1| (NC_003197) putative TPR repeat protein [S... 66 4e-10
ref|NP_661851.1| (NC_002932) conserved hypothetical protein... 65 9e-10
dbj|BAB22100.1| (AK002437) data source:SPTR, source key:Q14... 65 1e-09
gb|AAG30966.1|AC012396_2 (AC012396) hypothetical protein, 3... 64 2e-09
ref|NP_283034.1| (NC_003116) hypothetical protein NMA0184 [... 63 4e-09
gb|AAH30908.1| (BC030908) Unknown (protein for IMAGE:450426... 62 1e-08
ref|XP_134130.1| (XM_134130) similar to Ank repeat containi... 62 1e-08
ref|NP_080554.1| (NM_026278) RIKEN cDNA 2310006J04 [Mus mus... 62 1e-08
gb|AAL47061.1|AF326613_1 (AF326613) JHP318-like protein [He... 60 2e-08
gb|AAH11926.1|AAH11926 (BC011926) Similar to KIAA0141 gene ... 60 4e-08
ref|NP_531202.1| (NC_003304) conserved hypothetical protein... 60 4e-08
ref|NP_055588.1| (NM_014773) KIAA0141 gene product [Homo sa... 60 4e-08
ref|NP_353527.1| (NC_003062) AGR_C_883p [Agrobacterium tume... 60 4e-08
gb|AAH07855.1|AAH07855 (BC007855) KIAA0141 gene product [Ho... 60 4e-08
ref|NP_106249.1| (NC_002678) unknown protein [Mesorhizobium... 59 6e-08
ref|NP_473246.1| (NC_000521) predicted using hexExon; MAL3P... 59 8e-08
ref|NP_249051.1| (NC_002516) hypothetical protein [Pseudomo... 59 8e-08
dbj|BAA19847.1| (AB003310) chitin synthase regulatory facto... 58 1e-07
ref|NP_455035.1| (NC_003198) conserved hypothetical protein... 57 2e-07
ref|XP_130572.1| (XM_130572) similar to dJ842G6.2 (novel pr... 57 2e-07
ref|NP_459433.1| (NC_003197) putative periplasmic protein [... 57 2e-07
ref|NP_102363.1| (NC_002678) hypothetical protein [Mesorhiz... 57 3e-07
ref|NP_435252.1| (NC_003037) hypothetical protein [Sinorhiz... 54 2e-06
ref|NP_286374.1| (NC_002655) orf, hypothetical protein [Esc... 54 2e-06
ref|NP_585979.1| (NC_003234) similarity to HYPOTHETICAL PRO... 54 2e-06
ref|NP_253774.1| (NC_002516) hypothetical protein [Pseudomo... 54 3e-06
ref|NP_415180.1| (NC_000913) orf, hypothetical protein [Esc... 53 4e-06
ref|NP_455031.1| (NC_003198) probable secreted protein [Sal... 50 3e-05
ref|NP_521481.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 50 3e-05
ref|NP_643252.1| (NC_003919) conserved hypothetical protein... 50 3e-05
ref|NP_247788.1| (NC_000909) conserved hypothetical protein... 50 4e-05
ref|NP_439767.1| (NC_000907) H. influenzae predicted coding... 49 6e-05
ref|XP_132104.1| (XM_132104) similar to Sel-1 homolog precu... 49 6e-05
ref|NP_384642.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhiz... 49 8e-05
prf||1920224A skt5 gene [Saccharomyces cerevisiae] >gi|7422... 49 8e-05
ref|NP_638122.1| (NC_003902) conserved hypothetical protein... 48 1e-04
gb|AAH09945.1|AAH09945 (BC009945) Unknown (protein for IMAG... 48 1e-04
ref|NP_010078.1| (NC_001136) Hypothetical ORF; Ydl203cp [Sa... 48 1e-04
ref|NP_252667.1| (NC_002516) hypothetical protein [Pseudomo... 48 1e-04
ref|XP_045277.1| (XM_045277) KIAA0746 protein [Homo sapiens] 48 1e-04
pir||T38028 hypothetical protein SPAC1B3.10c - fission yeas... 48 1e-04
ref|NP_390626.1| (NC_000964) similar to hypothetical protei... 48 1e-04
ref|NP_594794.1| (NC_003424) hypothetical protein [Schizosa... 48 1e-04
gb|AAH26655.1| (BC026655) Similar to KIAA0746 protein [Mus ... 48 1e-04
dbj|BAA34466.1| (AB018289) KIAA0746 protein [Homo sapiens] 48 1e-04
ref|NP_539245.1| (NC_003317) TETRATRICOPEPTIDE REPEAT FAMIL... 48 1e-04
ref|NP_455032.1| (NC_003198) conserved hypothetical protein... 47 2e-04
ref|NP_253775.1| (NC_002516) hypothetical protein [Pseudomo... 47 3e-04
gb|AAM08443.1| (AC116959) hypothetical protein [Dictyosteli... 46 5e-04
ref|NP_487847.1| (NC_003272) hypothetical protein [Nostoc s... 46 5e-04
ref|NP_619470.1| (NC_003552) hypothetical protein (multi-do... 45 0.001
ref|NP_009492.1| (NC_001134) protoplast regeneration and ki... 45 0.001
ref|NP_602587.1| (NC_003454) Tetratricopeptide repeat famil... 45 0.001
gb|AAL08823.1|AF308666_2 (AF308666) hypothetical polar orga... 45 0.001
ref|NP_104918.1| (NC_002678) hypothetical protein [Mesorhiz... 45 0.001
ref|NP_253206.1| (NC_002516) hypothetical protein [Pseudomo... 45 0.001
gb|AAK01327.1|AF265265_1 (AF265265) unknown [uncultured org... 44 0.002
ref|NP_187761.1| (NM_111987) spindly (gibberellin signal tr... 44 0.002
gb|AAC60564.1| (S65415) protoplast regeneration and killer ... 44 0.002
gb|EAA03532.1| (AAAB01008794) agCP14246 [Anopheles gambiae ... 44 0.003
ref|NP_253773.1| (NC_002516) hypothetical protein [Pseudomo... 44 0.003
ref|NP_588282.1| (NC_003421) hypothetical protein [Schizosa... 44 0.003
gb|EAA08334.1| (AAAB01008879) agCP2877 [Anopheles gambiae s... 43 0.004
ref|NP_564992.1| (NM_105727) expressed protein [Arabidopsis... 43 0.004
ref|NP_592847.1| (NC_003424) similar to yeast protoplast re... 43 0.005
ref|NP_347702.1| (NC_003030) TPR-repeat containing protein ... 42 0.006
ref|NP_463149.1| (NC_003197) putative TPR repeat protein [S... 42 0.006
ref|NP_011022.1| (NC_001137) sporulation-specific homolog o... 42 0.006
emb|CAA76834.1| (Y17720) SPINDLY protein [Petunia x hybrida] 42 0.006
ref|NP_458583.1| (NC_003198) putative exported protein [Sal... 42 0.006
ref|NP_439711.1| (NC_000907) H. influenzae predicted coding... 42 0.006
emb|CAC85168.1| (AJ312093) SPY protein [Lycopersicon escule... 42 0.008
>ref|NP_207889.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||B64657 conserved hypothetical secreted protein HP1098 - Helicobacter
pylori (strain 26695)
gb|AAD08141.1| (AE000616) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 290
Score = 605 bits (1561), Expect = e-172
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE
Sbjct: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA
Sbjct: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
Query: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD
Sbjct: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
Query: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 240
AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN
Sbjct: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 240
Query: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV 290
GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV
Sbjct: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV 290
>ref|NP_223741.1| (NC_000921) putative [Helicobacter pylori J99]
pir||C71859 hypothetical protein jhp1024 - Helicobacter pylori (strain J99)
gb|AAD06595.1| (AE001530) putative [Helicobacter pylori J99]
Length = 290
Score = 595 bits (1534), Expect = e-169
Identities = 284/290 (97%), Positives = 286/290 (97%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
MLENVKKS FRVLCLGALCLGGLMAEQDPKELVGLGAKSYKE+DFTQAKKYFEKACDLKE
Sbjct: 1 MLENVKKSLFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEQDFTQAKKYFEKACDLKE 60
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
NSGCFNLGVLYYQG GVEKNLKKAASFY+KACDLNYSNGCHLLGNLYYSGQGVSQNTNKA
Sbjct: 61 NSGCFNLGVLYYQGHGVEKNLKKAASFYSKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
Query: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD
Sbjct: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
Query: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 240
AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGA KNFKEALARYSKACELEN
Sbjct: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAAKNFKEALARYSKACELEN 240
Query: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV 290
GGGCFNLGAMQYNGEG TRNEKQAIENFKKGCKLGAKGACDILKQLKIKV
Sbjct: 241 GGGCFNLGAMQYNGEGATRNEKQAIENFKKGCKLGAKGACDILKQLKIKV 290
>gb|AAM66156.1|AF326634_1 (AF326634) JHP1437-like protein [Helicobacter pylori]
Length = 327
Score = 278 bits (712), Expect = 4e-74
Identities = 146/323 (45%), Positives = 190/323 (58%), Gaps = 37/323 (11%)
Query: 2 LENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKEN 61
++ +KS FRVLCLGALCLGGLMAE +PKEL+ LG Y +KDFT+AK+YFEKAC+L +
Sbjct: 4 VKGCQKSGFRVLCLGALCLGGLMAESNPKELIFLGITIYTDKDFTRAKEYFEKACELHDA 63
Query: 62 SGCFNLGVLYYQ-------GQGVEK------------------------------NLKKA 84
GC L Y + + +EK +LK A
Sbjct: 64 DGCIILRETYSKVILKGSAKESIEKAIEHIATAKACKSNDAEKCKDLAEFYFNANDLKNA 123
Query: 85 ASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYH 144
+Y+K+C LN GC L Y + K L+YYSKAC+L Y +GCA LG IYH
Sbjct: 124 LEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNYGDGCAILGDIYH 183
Query: 145 DGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 204
+G+ VT++FKKA +Y++KAC+LN+G+GC+ LG Y G +DLKKA Y KAC+L +
Sbjct: 184 NGEGVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFFGESVTQDLKKAFGYYSKACELNE 243
Query: 205 SPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQA 264
+ C G Y GEG TK+ K+A +KACEL + GC+ L A G+GV R EKQ
Sbjct: 244 ALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYALAAFYNEGKGVARGEKQM 303
Query: 265 IENFKKGCKLGAKGACDILKQLK 287
ENF+K CKLG K ACD LK+ K
Sbjct: 304 TENFEKSCKLGLKEACDFLKEQK 326
>ref|NP_222918.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZMM1|HCPA_HELPJ HcpA protein precursor (Cysteine-rich 28 kDa protein)
pir||B71961 hypothetical protein jhp0197 - Helicobacter pylori (strain J99)
gb|AAD05781.1| (AE001458) putative [Helicobacter pylori J99]
Length = 250
Score = 278 bits (711), Expect = 5e-74
Identities = 142/290 (48%), Positives = 181/290 (61%), Gaps = 40/290 (13%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
ML +VKK+ F VLCLGALCL GLMAE D KELV LG +S K++DF QAK +FEKAC+LKE
Sbjct: 1 MLGSVKKTLFGVLCLGALCLRGLMAEPDAKELVSLGIESVKKQDFAQAKAHFEKACELKE 60
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
GC LG Y +G+GV K+LKKA FY K C+LN GC LLGNLYY+GQGVS++ KA
Sbjct: 61 GFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCRLLGNLYYNGQGVSKDAKKA 120
Query: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
QYYSK+C+L +AEGC LG ++H G +D +KA++ + KACDL D GC G +Y
Sbjct: 121 SQYYSKSCELNHAEGCTVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYMY- 179
Query: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 240
G K+ K+A+ Y KAC+LKD GC+N G M ++ +G K+ K+A+
Sbjct: 180 ---GVAKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAV----------- 225
Query: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV 290
ENFKKGCK K ACD LK+LKI++
Sbjct: 226 -------------------------ENFKKGCKSSVKEACDALKELKIEL 250
>gb|AAC24210.1| (AF053708) cysteine-rich protein; HcpA [Helicobacter pylori]
Length = 250
Score = 278 bits (710), Expect = 7e-74
Identities = 142/290 (48%), Positives = 182/290 (61%), Gaps = 40/290 (13%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
ML +VKK+FF VLCLGALCL GLMAE D KELV LG +S K++DF QAK +FEKAC+LK
Sbjct: 1 MLGSVKKTFFGVLCLGALCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKN 60
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
GC LG Y +G+GV K+LKKA FY K+C+LN GC+LLGNLYY+GQGVS++ KA
Sbjct: 61 GFGCVFLGAFYEEGKGVGKDLKKAIQFYTKSCELNDGYGCNLLGNLYYNGQGVSKDAKKA 120
Query: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
QYYSKACDL +AEGC LG ++H G +D +KA++ + KACDL D GC G +Y
Sbjct: 121 SQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIY- 179
Query: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 240
K+ K+A+ Y +AC+L D GC+N G M ++ +G K+ K+A+
Sbjct: 180 ---SVTKNFKEAIVRYSQACELNDGRGCYNLGVMQYNAQGTAKDEKQAV----------- 225
Query: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV 290
ENFKKGCK G K ACD LK+LKI++
Sbjct: 226 -------------------------ENFKKGCKSGVKEACDALKELKIEL 250
>gb|AAB63298.1| (AF008565) Orf2 [Helicobacter pylori]
Length = 250
Score = 277 bits (709), Expect = 9e-74
Identities = 142/290 (48%), Positives = 182/290 (61%), Gaps = 40/290 (13%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
ML +VKK+FF VLCLGALCL GLMAE D KELV LG +S K++DF QAK +FEKAC+LK
Sbjct: 1 MLGSVKKTFFWVLCLGALCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKN 60
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
GC LG Y +G+GV K+LKKA FY K+C+LN GC+LLGNLYY+GQGVS++ KA
Sbjct: 61 GFGCVFLGAFYEEGKGVGKDLKKAIQFYTKSCELNDGYGCNLLGNLYYNGQGVSKDAKKA 120
Query: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
QYYSKACDL +AEGC LG ++H G +D +KA++ + KACDL D GC G +Y
Sbjct: 121 SQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIY- 179
Query: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 240
K+ K+A+ Y +AC+L D GC+N G M ++ +G K+ K+A+
Sbjct: 180 ---SVTKNFKEAIVRYSQACELNDGRGCYNLGVMQYNAQGTAKDEKQAV----------- 225
Query: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV 290
ENFKKGCK G K ACD LK+LKI++
Sbjct: 226 -------------------------ENFKKGCKSGVKEACDALKELKIEL 250
>ref|NP_207009.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
sp|O25001|HCPA_HELPY HcpA protein precursor (Cysteine-rich 28 kDa protein)
pir||C64546 conserved hypothetical secreted protein HP0211 - Helicobacter
pylori (strain 26695)
gb|AAD07279.1| (AE000541) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 250
Score = 276 bits (707), Expect = 1e-73
Identities = 142/290 (48%), Positives = 179/290 (60%), Gaps = 40/290 (13%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
ML NVKK+ F VLCLG LCL GLMAE D KELV LG +S K++DF QAK +FEKAC+LK
Sbjct: 1 MLGNVKKTLFGVLCLGTLCLRGLMAEPDAKELVNLGIESAKKQDFAQAKTHFEKACELKN 60
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
GC LG Y +G+GV K+LKKA FY K C+LN GC+LLGNLYY+GQGVS++ KA
Sbjct: 61 GFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKA 120
Query: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
QYYSKACDL +AEGC LG ++H G +D +KA++ + KACDL D GC G +Y
Sbjct: 121 SQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIY- 179
Query: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 240
K+ K+A+ Y KAC+LKD GC+N G M ++ +G K+ K+A+
Sbjct: 180 ---SVTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAV----------- 225
Query: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV 290
ENFKKGCK K ACD LK+LKI++
Sbjct: 226 -------------------------ENFKKGCKSSVKEACDALKELKIEL 250
>gb|AAM66150.1|AF326629_1 (AF326629) JHP1437-like protein [Helicobacter pylori]
Length = 325
Score = 265 bits (677), Expect = 4e-70
Identities = 144/325 (44%), Positives = 183/325 (56%), Gaps = 38/325 (11%)
Query: 1 MLENVKKSFFRVLCLGALCL-GGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLK 59
ML +VKK+ FRVLCLGALCL GGLMAEQDPKEL+ G Y +K+FT+AKKYFEKAC
Sbjct: 1 MLGSVKKAVFRVLCLGALCLCGGLMAEQDPKELILSGITIYTDKNFTRAKKYFEKACKSN 60
Query: 60 ENSGCFNLGVLYYQG-------QGVEK------------------------------NLK 82
+ GC L Y + + +EK +LK
Sbjct: 61 DADGCAILREAYSKAIARENARESIEKALEHTATAKACKSNDAEKCRDLAEFYFNVNDLK 120
Query: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
A +Y+K+C LN GC L Y + K L+YYSKAC+L Y +GCA LG I
Sbjct: 121 NALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNYGDGCAILGDI 180
Query: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
YH+G+ V +D KKA +Y++KAC+LN+G+G + LG Y G G +DLKKA Y KAC L
Sbjct: 181 YHNGEGVAKDLKKAFQYYSKACELNNGEGYSKLGGAYFFGEGVTQDLKKAFGYYSKACKL 240
Query: 203 KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEK 262
++ C G Y GEG K+ K+A +KACEL + GC+ L A +GV R EK
Sbjct: 241 NEALTCTLVGEFYRDGEGVAKDLKKAFEYSAKACELNDAKGCYALAAFFNEAKGVARGEK 300
Query: 263 QAIENFKKGCKLGAKGACDILKQLK 287
Q EN +K CKLG K CDI K+ K
Sbjct: 301 QTTENLEKSCKLGLKETCDIFKEQK 325
>gb|AAM66155.1|AF326633_1 (AF326633) JHP1437-like protein [Helicobacter pylori]
Length = 336
Score = 261 bits (667), Expect = 6e-69
Identities = 138/313 (44%), Positives = 182/313 (58%), Gaps = 37/313 (11%)
Query: 2 LENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKEN 61
++ +KS FRVLCL ALCLGGLMAE +PKEL+ LG Y +KDFT+AK+YFEKAC+L +
Sbjct: 4 VKGCQKSGFRVLCLVALCLGGLMAESNPKELIFLGITIYTDKDFTRAKEYFEKACELHDA 63
Query: 62 SGCFNLGVLYYQ-------GQGVEK------------------------------NLKKA 84
GC L Y + + +EK +LK A
Sbjct: 64 DGCIILRETYSKVILKGSAKESIEKAIEHIATAKACKSNDAEKCKDLAEFYFNANDLKNA 123
Query: 85 ASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYH 144
+Y+K+C LN GC L Y + K L+YYSKAC+L Y +GCA LG IYH
Sbjct: 124 LEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNYGDGCAILGDIYH 183
Query: 145 DGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 204
+G+ VT++FKKA +Y++KAC+LN+G+GC+ LG Y G +DLKKA Y KAC+L +
Sbjct: 184 NGEGVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFFGESVTQDLKKAFGYYSKACELNE 243
Query: 205 SPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQA 264
+ C G Y GEG TK+ K+A +KACEL + GC++L A G+GV R EKQ
Sbjct: 244 ALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYSLAAFFNEGKGVARGEKQM 303
Query: 265 IENFKKGCKLGAK 277
EN +K CKLG K
Sbjct: 304 TENLEKSCKLGLK 316
>ref|NP_223037.1| (NC_000921) putative [Helicobacter pylori J99]
pir||F71945 hypothetical protein jhp0318 - Helicobacter pylori (strain J99)
gb|AAD05894.1| (AE001468) putative [Helicobacter pylori J99]
Length = 251
Score = 254 bits (648), Expect = 1e-66
Identities = 128/251 (50%), Positives = 162/251 (63%), Gaps = 1/251 (0%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
+G KS K KDF QAKKYFEKAC+L GC LG LY G+GVEKNL KAA Y KAC+L
Sbjct: 1 MGVKSNKAKDFIQAKKYFEKACNLNYGGGCGALGDLYDDGKGVEKNLIKAAQPYTKACEL 60
Query: 95 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFK 154
GC L +LYY G+GV +N KA QY SKACDL GC +LG +Y G+ V +D
Sbjct: 61 KEGLGCERLWSLYYYGRGVEKNLIKAAQYASKACDLNNGVGCKNLGFLYEYGEGVEKDLI 120
Query: 155 KAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNM 214
KA +Y +KACDLN+G GC +LG LY +G+G K+L KA Y KACDL + GCFN G +
Sbjct: 121 KAAQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTKAAYFYSKACDLNEGLGCFNLGGL 180
Query: 215 YHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL 274
Y +G+G K+ + YSKACEL+ GC L + NG+GV ++ +A + K CKL
Sbjct: 181 Y-NGQGVEKDLTKVAYLYSKACELKESFGCGALAVLYINGQGVEKDLTKADQYISKACKL 239
Query: 275 GAKGACDILKQ 285
G + AC+ LK+
Sbjct: 240 GDQEACEALKE 250
Score = 46.6 bits (109), Expect = 3e-04
Identities = 24/64 (37%), Positives = 36/64 (55%)
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDI 282
K+F +A + KAC L GGGC LG + +G+GV +N +A + + K C+L C+
Sbjct: 9 KDFIQAKKYFEKACNLNYGGGCGALGDLYDDGKGVEKNLIKAAQPYTKACELKEGLGCER 68
Query: 283 LKQL 286
L L
Sbjct: 69 LWSL 72
>gb|AAM66149.1|AF326628_1 (AF326628) JHP1437-like protein [Helicobacter pylori]
Length = 310
Score = 234 bits (597), Expect = 8e-61
Identities = 127/307 (41%), Positives = 171/307 (55%), Gaps = 37/307 (12%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
ML VKK+ FRVLCL ALCLGGLMAE +PKEL+ G Y +KDFT+AK+YFEKAC L +
Sbjct: 1 MLRGVKKAVFRVLCLVALCLGGLMAESNPKELIFSGITIYTDKDFTRAKEYFEKACRLND 60
Query: 61 NSGCFNLGVLYYQ-------GQGVEK------------------------------NLKK 83
GC L Y + + +EK +LK
Sbjct: 61 ADGCAILREAYSKVILKGSARESIEKALEHTATAKACKSNDAEKCKDLAEFYFNANDLKN 120
Query: 84 AASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIY 143
A +Y+K+C LN GC L Y + K L+YYSKAC+L Y +GCA LG IY
Sbjct: 121 ALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNYGDGCAILGDIY 180
Query: 144 HDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK 203
H+G+ VT++FKKA +Y++KAC+LN+G+GC+ LG Y G +DLKKA Y KAC+L
Sbjct: 181 HNGEGVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFLGESVTQDLKKAFGYYSKACELN 240
Query: 204 DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQ 263
++ C G Y GEG TK+ K+A +KACEL + GC+ L A + + R + +
Sbjct: 241 EALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYALAAFLMGVKALQRVKSK 300
Query: 264 AIENFKK 270
+ K+
Sbjct: 301 RPKTLKR 307
>gb|AAL47062.1|AF326614_1 (AF326614) JHP318-like protein [Helicobacter pylori]
Length = 216
Score = 225 bits (573), Expect = 5e-58
Identities = 110/210 (52%), Positives = 139/210 (65%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
+G KS + KD+ QAKKYFEKAC L GC LG LY G+GVEKNL KAA FY+KACDL
Sbjct: 1 MGVKSSEAKDYIQAKKYFEKACGLNNGGGCGALGDLYDDGKGVEKNLIKAAYFYSKACDL 60
Query: 95 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFK 154
GC LG+LYY G+ V +N KA +YSKACDL GC +LG +Y G+ V ++
Sbjct: 61 KEGMGCKRLGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLI 120
Query: 155 KAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNM 214
KA ++++KAC+L DG GC LG+LY G G KDL KA Y KACDLK+ GCFN G +
Sbjct: 121 KAAQFYSKACELKDGLGCKDLGTLYYNGEGVEKDLIKAAYLYSKACDLKEGLGCFNLGAL 180
Query: 215 YHHGEGATKNFKEALARYSKACELENGGGC 244
Y++G+G K+ +A YSKAC+L + C
Sbjct: 181 YYNGKGVEKDLTKAAYFYSKACKLGSQEAC 210
Score = 149 bits (375), Expect = 5e-35
Identities = 70/134 (52%), Positives = 91/134 (67%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
EK+ T+A ++ KACDL GC NLGVLY +G+GVEKNL KAA FY+KAC+L GC
Sbjct: 80 EKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIKAAQFYSKACELKDGLGCK 139
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
LG LYY+G+GV ++ KA YSKACDLK GC +LG +Y++GK V +D KA +++
Sbjct: 140 DLGTLYYNGEGVEKDLIKAAYLYSKACDLKEGLGCFNLGALYYNGKGVEKDLTKAAYFYS 199
Query: 162 KACDLNDGDGCTIL 175
KAC L + C L
Sbjct: 200 KACKLGSQEACEAL 213
Score = 45.1 bits (105), Expect = 0.001
Identities = 24/64 (37%), Positives = 34/64 (52%)
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDI 282
K++ +A + KAC L NGGGC LG + +G+GV +N +A + K C L C
Sbjct: 9 KDYIQAKKYFEKACGLNNGGGCGALGDLYDDGKGVEKNLIKAAYFYSKACDLKEGMGCKR 68
Query: 283 LKQL 286
L L
Sbjct: 69 LGSL 72
>ref|NP_206959.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||H64539 conserved hypothetical secreted protein HP0160 - Helicobacter
pylori (strain 26695)
gb|AAD07230.1| (AE000537) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 306
Score = 217 bits (553), Expect = 1e-55
Identities = 106/286 (37%), Positives = 166/286 (57%), Gaps = 1/286 (0%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
M+++ K +F +L L A C L+A K + +++K D+ +A +++++C+L+
Sbjct: 1 MIKSWTKKWFLILFLMASCSSYLVATTGEKYFK-MATQAFKRGDYHKAVAFYKRSCNLRV 59
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
GC +LG +Y G GV++N+ KA +Y + C+L C LG++Y G GV +N KA
Sbjct: 60 GVGCTSLGSMYEDGDGVDQNITKAVFYYRRGCNLRNHLACASLGSMYEDGDGVQKNLPKA 119
Query: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
+ YY + C LK C SLG +Y +G V +++ KA+ AC LN G C +G +Y
Sbjct: 120 IYYYRRGCHLKGGVSCGSLGFMYFNGTGVKQNYAKALFLSKYACSLNYGISCNFVGYMYR 179
Query: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 240
+G KDLKKALA++ + C LKD C + G MY G +N ++AL Y K C L+
Sbjct: 180 NAKGVQKDLKKALANFKRGCHLKDGASCVSLGYMYEVGMDVKQNGEQALNLYKKGCYLKR 239
Query: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQL 286
G GC N+ M Y G+GV ++ +AI +KKGC LG G+C +L+++
Sbjct: 240 GSGCHNVAVMYYTGKGVPKDLDKAISYYKKGCTLGFSGSCKVLEEV 285
>ref|NP_222869.1| (NC_000921) putative [Helicobacter pylori J99]
pir||F71968 hypothetical protein jhp0148 - Helicobacter pylori (strain J99)
gb|AAD05729.1| (AE001453) putative [Helicobacter pylori J99]
Length = 305
Score = 216 bits (551), Expect = 2e-55
Identities = 103/284 (36%), Positives = 165/284 (57%), Gaps = 1/284 (0%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
M+++ K +F +L L A C G L+A K + ++ K D+ +A +++++C+L+
Sbjct: 1 MIKSWTKKWFLILFLMASCFGHLVATTGEKYFK-MANQALKRGDYHRAVAFYKRSCNLRM 59
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
GC +LG +Y G GV++N+ KA +Y + C+L C LG++Y G GV ++ KA
Sbjct: 60 GVGCTSLGSMYEYGDGVDQNISKAVFYYRRGCNLRNHLACASLGSMYEDGDGVQKDFPKA 119
Query: 121 LQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYD 180
+ YY + C LK C SLG +Y +G V +++ KA+ + AC LN G C +G +Y
Sbjct: 120 IYYYRRGCHLKGGVSCGSLGFMYFNGTGVKQNYAKALSFSKYACSLNYGISCNFVGYMYK 179
Query: 181 AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELEN 240
+ +G KDLKKALA++ + C LKD C + G +Y G +N ++AL Y K C L+
Sbjct: 180 SAKGVEKDLKKALANFKRGCHLKDGASCVSLGYLYEAGMDVKQNEEQALNLYKKGCSLKE 239
Query: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILK 284
G GC N+ M Y G+G ++ ++A +KKGC LG G+C +L+
Sbjct: 240 GSGCHNVAVMYYTGKGAPKDLEKATSYYKKGCALGFSGSCKVLE 283
>gb|AAL47058.1|AF326608_1 (AF326608) JHP318-like protein [Helicobacter pylori]
Length = 215
Score = 211 bits (536), Expect = 1e-53
Identities = 108/205 (52%), Positives = 136/205 (65%), Gaps = 1/205 (0%)
Query: 1 MLENVKKSFFRVLCLGALCLGG-LMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLK 59
ML + KK+ FR LCL + +GG LMAE +P+ELV LG SY ++DF++A+KYFE+AC L
Sbjct: 1 MLGSFKKAIFRALCLCCVLIGGGLMAEPNPEELVDLGMLSYDKQDFSKARKYFERACGLN 60
Query: 60 ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNK 119
GC NLGVLY GQGVEKNL KAA FY+KAC+L GC LG LY G+ V +N K
Sbjct: 61 NGRGCNNLGVLYRDGQGVEKNLTKAAQFYSKACELKDGGGCGNLGVLYQKGEVVEKNLTK 120
Query: 120 ALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLY 179
A Q+YSKAC+LK GC +LG +Y G+VV ++ KA ++KAC+L + GC L LY
Sbjct: 121 AAQFYSKACELKDGGGCGNLGVLYQKGEVVEKNLTKAAYLYSKACELKESFGCGALAVLY 180
Query: 180 DAGRGTPKDLKKALASYDKACDLKD 204
G+G KDL KA KAC L D
Sbjct: 181 INGQGVEKDLTKADQYISKACKLGD 205
Score = 151 bits (381), Expect = 9e-36
Identities = 79/183 (43%), Positives = 106/183 (57%), Gaps = 4/183 (2%)
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
LG L Y Q S KA +Y+ +AC L GC +LG +Y DG+ V ++ KA ++++K
Sbjct: 36 LGMLSYDKQDFS----KARKYFERACGLNNGRGCNNLGVLYRDGQGVEKNLTKAAQFYSK 91
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
AC+L DG GC LG LY G K+L KA Y KAC+LKD GC N G +Y GE
Sbjct: 92 ACELKDGGGCGNLGVLYQKGEVVEKNLTKAAQFYSKACELKDGGGCGNLGVLYQKGEVVE 151
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDI 282
KN +A YSKACEL+ GC L + NG+GV ++ +A + K CKLG + A +
Sbjct: 152 KNLTKAAYLYSKACELKESFGCGALAVLYINGQGVEKDLTKADQYISKACKLGDQEARET 211
Query: 283 LKQ 285
LK+
Sbjct: 212 LKE 214
Score = 129 bits (324), Expect = 4e-29
Identities = 70/155 (45%), Positives = 88/155 (56%), Gaps = 4/155 (2%)
Query: 134 EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKAL 193
E LG + +D +DF KA +YF +AC LN+G GC LG LY G+G K+L KA
Sbjct: 31 EELVDLGMLSYD----KQDFSKARKYFERACGLNNGRGCNNLGVLYRDGQGVEKNLTKAA 86
Query: 194 ASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYN 253
Y KAC+LKD GC N G +Y GE KN +A YSKACEL++GGGC NLG +
Sbjct: 87 QFYSKACELKDGGGCGNLGVLYQKGEVVEKNLTKAAQFYSKACELKDGGGCGNLGVLYQK 146
Query: 254 GEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKI 288
GE V +N +A + K C+L C L L I
Sbjct: 147 GEVVEKNLTKAAYLYSKACELKESFGCGALAVLYI 181
>gb|AAL47059.1|AF326610_1 (AF326610) JHP318-like protein [Helicobacter pylori]
Length = 213
Score = 204 bits (518), Expect = 1e-51
Identities = 105/210 (50%), Positives = 135/210 (64%), Gaps = 3/210 (1%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
+G SY ++DF++A+KYFEKACDLK GC LG LY VEKNL KAA FY+KACDL
Sbjct: 1 MGMLSYDKQDFSKARKYFEKACDLKYGGGCGALGDLY---DDVEKNLIKAAYFYSKACDL 57
Query: 95 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFK 154
GC LG+LYY G+ V +N KA +YSKACDL GC +LG +Y G+ V ++
Sbjct: 58 KEGMGCKRLGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLI 117
Query: 155 KAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNM 214
KA ++++KAC+L DG GC LG+LY G G KDL KA Y KAC+LK+S GC +
Sbjct: 118 KAAQFYSKACELKDGLGCKDLGTLYYNGEGVEKDLIKAAYLYSKACELKESFGCGALAVL 177
Query: 215 YHHGEGATKNFKEALARYSKACELENGGGC 244
Y +G+G KN +A SKAC+L + C
Sbjct: 178 YINGQGVEKNLIKADQYISKACKLGDQEAC 207
Score = 195 bits (495), Expect = 6e-49
Identities = 99/219 (45%), Positives = 133/219 (60%), Gaps = 7/219 (3%)
Query: 67 LGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSK 126
+G+L Y Q + KA ++ KACDL Y GC LG+LY V +N KA +YSK
Sbjct: 1 MGMLSYDKQ----DFSKARKYFEKACDLKYGGGCGALGDLY---DDVEKNLIKAAYFYSK 53
Query: 127 ACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTP 186
ACDLK GC LG +Y+ G+ V ++ KA +++KACDLN+G GC LG LY G G
Sbjct: 54 ACDLKEGMGCKRLGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVE 113
Query: 187 KDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFN 246
K+L KA Y KAC+LKD GC + G +Y++GEG K+ +A YSKACEL+ GC
Sbjct: 114 KNLIKAAQFYSKACELKDGLGCKDLGTLYYNGEGVEKDLIKAAYLYSKACELKESFGCGA 173
Query: 247 LGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQ 285
L + NG+GV +N +A + K CKLG + AC+ LK+
Sbjct: 174 LAVLYINGQGVEKNLIKADQYISKACKLGDQEACEALKE 212
Score = 158 bits (400), Expect = 6e-38
Identities = 82/174 (47%), Positives = 107/174 (61%), Gaps = 3/174 (1%)
Query: 115 QNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTI 174
Q+ +KA +Y+ KACDLKY GC +LG +Y D V ++ KA +++KACDL +G GC
Sbjct: 9 QDFSKARKYFEKACDLKYGGGCGALGDLYDD---VEKNLIKAAYFYSKACDLKEGMGCKR 65
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
LGSLY GR K+L KA Y KACDL + GC N G +Y GEG KN +A YSK
Sbjct: 66 LGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIKAAQFYSK 125
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKI 288
ACEL++G GC +LG + YNGEGV ++ +A + K C+L C L L I
Sbjct: 126 ACELKDGLGCKDLGTLYYNGEGVEKDLIKAAYLYSKACELKESFGCGALAVLYI 179
Score = 142 bits (357), Expect = 6e-33
Identities = 68/134 (50%), Positives = 91/134 (67%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
EK+ T+A ++ KACDL GC NLGVLY +G+GVEKNL KAA FY+KAC+L GC
Sbjct: 77 EKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIKAAQFYSKACELKDGLGCK 136
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
LG LYY+G+GV ++ KA YSKAC+LK + GC +L +Y +G+ V ++ KA +Y +
Sbjct: 137 DLGTLYYNGEGVEKDLIKAAYLYSKACELKESFGCGALAVLYINGQGVEKNLIKADQYIS 196
Query: 162 KACDLNDGDGCTIL 175
KAC L D + C L
Sbjct: 197 KACKLGDQEACEAL 210
>ref|NP_224155.1| (NC_000921) putative [Helicobacter pylori J99]
pir||E71807 hypothetical protein jhp1437 - Helicobacter pylori (strain J99)
gb|AAD07008.1| (AE001566) putative [Helicobacter pylori J99]
Length = 256
Score = 198 bits (504), Expect = 5e-50
Identities = 121/297 (40%), Positives = 156/297 (51%), Gaps = 52/297 (17%)
Query: 1 MLENVKKSFFRVLCLGALCL-GGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLK 59
ML +VKK+ FRVLCLGALCL GGLMAEQDPKEL+ G Y +K+FT+AKKYFEKAC
Sbjct: 1 MLGSVKKAVFRVLCLGALCLCGGLMAEQDPKELIFSGITIYTDKNFTRAKKYFEKACKSN 60
Query: 60 ENSGCFNLGVLYYQG---------QGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG 110
+ GC L +Y G + +EK L+ A+ AK C LN + C L Y++
Sbjct: 61 DADGCAILREVYSSGKAIARENARESIEKALEHTAT--AKVCKLNDAEKCKDLAEFYFN- 117
Query: 111 QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGD 170
+ AL+YYSK+C L EGC Y+D + KK +EY++KAC+LN+G
Sbjct: 118 ---VNDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNNGG 174
Query: 171 GCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALA 230
GC+ LG Y G G KD KKA KAC+L D+ GC+ Y+ G+G K+ K+
Sbjct: 175 GCSKLGGDYFFGEGVTKDFKKAFEYSAKACELNDAKGCYALAAFYNEGKGVAKDEKQ--- 231
Query: 231 RYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLK 287
T N +K CKLG K ACDILK+ K
Sbjct: 232 --------------------------TTEN-------LEKSCKLGLKEACDILKEQK 255
>gb|AAM66148.1|AF326627_1 (AF326627) JHP1437-like protein [Helicobacter pylori]
Length = 253
Score = 196 bits (499), Expect = 2e-49
Identities = 116/293 (39%), Positives = 157/293 (52%), Gaps = 47/293 (16%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
ML VKK+ FRVLCL ALCLGGLMAE +PKEL+ LG Y +KDFT+AK+
Sbjct: 1 MLRGVKKAVFRVLCLVALCLGGLMAESNPKELIFLGITIYTDKDFTRAKE---------- 50
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYS---GQGVSQNT 117
++ KAC+L+ ++GC +L Y ++
Sbjct: 51 --------------------------YFEKACELHDADGCAILREAYSKVILKGSARESI 84
Query: 118 NKALQYYS--KACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTIL 175
KAL++ + KAC AE C L Y + D K A+EY++K+C LN+ +GC +
Sbjct: 85 EKALEHTATAKACKSNDAEKCKDLAEFYFNAN----DLKNALEYYSKSCKLNNVEGCMLS 140
Query: 176 GSLY-DAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
+ Y D +G KD KK L Y KAC+L ++ C G Y GEG TK+ K+A +K
Sbjct: 141 ATFYNDMIKGLKKD-KKDLEYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAK 199
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLK 287
ACEL + GC+ L A G+GV ++EKQ EN +K CKLG K ACDI K+ K
Sbjct: 200 ACELNDAKGCYALAAFYNEGKGVAKDEKQTTENLEKSCKLGLKEACDIFKEQK 252
>gb|AAM66151.1|AF326630_1 (AF326630) JHP1437-like protein [Helicobacter pylori]
Length = 255
Score = 193 bits (490), Expect = 2e-48
Identities = 115/293 (39%), Positives = 153/293 (51%), Gaps = 49/293 (16%)
Query: 2 LENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKEN 61
++ +KS FRVLCLGALCLGGLMAE +PKEL+ G Y +KDFT+AK+YFEKAC L +
Sbjct: 4 VKGCQKSGFRVLCLGALCLGGLMAEPNPKELIFSGITIYTDKDFTRAKEYFEKACKLNDA 63
Query: 62 SGCFNLGVLYYQ-------GQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVS 114
GC L Y + + +EK L+ A+ AKAC N + C L Y++ +
Sbjct: 64 DGCTILREAYSKVILKGSARESIEKALEHTAT--AKACKSNDAEKCKDLAEFYFN----A 117
Query: 115 QNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTI 174
+ AL+YYSK+C L EGC Y+D + KK +EY++KAC+LN+ CT+
Sbjct: 118 NDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNEALTCTL 177
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
+G Y G G KDLKKA KAC+L D+ GC+ Y+ G+G K K+
Sbjct: 178 VGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYALAAFYNEGKGVAKGEKQ------- 230
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLK 287
T N +K CKLG K ACDILK+ K
Sbjct: 231 ----------------------TTEN-------LEKSCKLGLKEACDILKEQK 254
>ref|NP_222941.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71958 hypothetical protein jhp0220 - Helicobacter pylori (strain J99)
gb|AAD05807.1| (AE001460) putative [Helicobacter pylori J99]
Length = 355
Score = 182 bits (463), Expect = 3e-45
Identities = 102/275 (37%), Positives = 156/275 (56%), Gaps = 21/275 (7%)
Query: 16 GALCLGGLMAEQDPKELVGLG-AKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQG 74
G LGGL E GLG A++Y+E A + KAC LK C+NLG++Y
Sbjct: 97 GCFGLGGLYDE-------GLGTAQNYQE-----AIDAYAKACVLKHPESCYNLGIIY--D 142
Query: 75 QGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYA 133
+ ++ N +A ++Y K+C+ + + GC++LG Y G V Q+ +KA+ YY KAC L
Sbjct: 143 RKIKGNAAQAVTYYQKSCNFDMAKGCYILGTAYEKGFLEVKQSNHKAVIYYLKACRLNEG 202
Query: 134 EGCASLGGIYHDGKV-VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKA 192
+ C +LG ++ +G + DF+ A +Y KAC LN+ GC LGS+Y GR KD +KA
Sbjct: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACALNNSGGCASLGSMYMLGRYVKKDPQKA 262
Query: 193 LASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQY 252
+ +ACD+ + C G MY G+ +K+ ++AL Y + C++ + GCF L M Y
Sbjct: 263 FNYFKQACDMGSAVSCSRMGFMYSQGDTVSKDLRKALDNYERGCDMGDEVGCFALAGMYY 322
Query: 253 NGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLK 287
N ++++ AI + KGCKLG K AC+ L +L+
Sbjct: 323 N----MKDKENAIMIYDKGCKLGMKQACENLTKLR 353
Score = 178 bits (452), Expect = 5e-44
Identities = 95/260 (36%), Positives = 148/260 (56%), Gaps = 5/260 (1%)
Query: 23 LMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLK 82
L +QD +G+G ++YK ++++A YF+KAC+ + GC LG++Y GQG + K
Sbjct: 22 LWGKQD-NSFLGIGERAYKSGNYSKAASYFKKACNDGVSEGCTQLGIIYENGQGTRIDYK 80
Query: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
KA +Y AC + GC LG LY G G +QN +A+ Y+KAC LK+ E C +LG I
Sbjct: 81 KALEYYKTACQADDREGCFGLGGLYDEGLGTAQNYQEAIDAYAKACVLKHPESCYNLGII 140
Query: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLK-KALASYDKACD 201
Y + + + +AV Y+ K+C+ + GC ILG+ Y+ G K KA+ Y KAC
Sbjct: 141 Y--DRKIKGNAAQAVTYYQKSCNFDMAKGCYILGTAYEKGFLEVKQSNHKAVIYYLKACR 198
Query: 202 LKDSPGCFNAGNMYHHGE-GATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRN 260
L + C G+++ +G+ G ++F+ A KAC L N GGC +LG+M G V ++
Sbjct: 199 LNEGQACRALGSLFENGDAGLDEDFEVAFDYLQKACALNNSGGCASLGSMYMLGRYVKKD 258
Query: 261 EKQAIENFKKGCKLGAKGAC 280
++A FK+ C +G+ +C
Sbjct: 259 PQKAFNYFKQACDMGSAVSC 278
>ref|NP_207033.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||C64549 conserved hypothetical secreted protein HP0235 - Helicobacter
pylori (strain 26695)
gb|AAD07303.1| (AE000543) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 355
Score = 180 bits (457), Expect = 1e-44
Identities = 99/274 (36%), Positives = 153/274 (55%), Gaps = 19/274 (6%)
Query: 16 GALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQ 75
G LGGL E GLG +++ +A + KAC LK C+NLG++Y +
Sbjct: 97 GCFGLGGLYDE-------GLGTT----QNYQEAIDAYAKACVLKHPESCYNLGIIY--DR 143
Query: 76 GVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAE 134
++ N +A ++Y K+C+ + + GC++LG Y G V Q+ +KA+ YY KAC L +
Sbjct: 144 KIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQ 203
Query: 135 GCASLGGIYHDGKV-VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKAL 193
C +LG ++ +G + DF+ A +Y KAC LN+ GC LGS+Y GR KD +KA
Sbjct: 204 ACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAF 263
Query: 194 ASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYN 253
+ +ACD+ + C G MY G+ K+ ++AL Y + C++ + GCF L M YN
Sbjct: 264 NFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN 323
Query: 254 GEGVTRNEKQAIENFKKGCKLGAKGACDILKQLK 287
++++ AI + KGCKLG K AC+ L +L+
Sbjct: 324 ----MKDKENAIMIYDKGCKLGMKQACENLTKLR 353
Score = 176 bits (445), Expect = 4e-43
Identities = 95/260 (36%), Positives = 146/260 (55%), Gaps = 5/260 (1%)
Query: 23 LMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLK 82
L +QD +G+ K+YK ++++A YF+KAC+ + GC LG++Y GQG + K
Sbjct: 22 LWGKQD-NSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYK 80
Query: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
KA +Y AC + GC LG LY G G +QN +A+ Y+KAC LK+ E C +LG I
Sbjct: 81 KALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII 140
Query: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLK-KALASYDKACD 201
Y + + + +AV Y+ K+C+ + GC +LG Y+ G K KA+ Y KAC
Sbjct: 141 Y--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACR 198
Query: 202 LKDSPGCFNAGNMYHHGE-GATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRN 260
L D C G+++ +G+ G ++F+ A KAC L N GGC +LG+M G V ++
Sbjct: 199 LDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKD 258
Query: 261 EKQAIENFKKGCKLGAKGAC 280
++A FK+ C +G+ +C
Sbjct: 259 PQKAFNFFKQACDMGSAVSC 278
>gb|AAL47063.1|AF326616_1 (AF326616) JHP1024-like protein [Helicobacter pylori]
Length = 122
Score = 154 bits (389), Expect = 1e-36
Identities = 77/122 (63%), Positives = 91/122 (74%), Gaps = 3/122 (2%)
Query: 1 MLENVKKSFFRVLCLGALCL--GGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDL 58
MLEN KK+ FR LCL LC+ GGLMAE +PKEL LG ++YK KD+ +AKKYFEKAC+L
Sbjct: 1 MLENFKKAIFRALCL-LLCVDWGGLMAEPNPKELFDLGVENYKAKDYIKAKKYFEKACEL 59
Query: 59 KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTN 118
K+ GCFNLG LYY G+GVEK+ KKA + + KACDLN S GC LG LY GQGV +N
Sbjct: 60 KDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLNNSGGCGTLGMLYEFGQGVEKNLT 119
Query: 119 KA 120
KA
Sbjct: 120 KA 121
Score = 88.2 bits (217), Expect = 1e-16
Identities = 50/120 (41%), Positives = 69/120 (56%), Gaps = 9/120 (7%)
Query: 152 DFKKAVEYFTKACDLNDGDGCTILGS-----LYDAG--RGTPKDLKKALASYDKACDLKD 204
+FKKA+ F C L D ++ L+D G KD KA ++KAC+LKD
Sbjct: 4 NFKKAI--FRALCLLLCVDWGGLMAEPNPKELFDLGVENYKAKDYIKAKKYFEKACELKD 61
Query: 205 SPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQA 264
GCFN G +Y++GEG K+FK+A A + KAC+L N GGC LG + G+GV +N +A
Sbjct: 62 GGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLNNSGGCGTLGMLYEFGQGVEKNLTKA 121
Score = 86.7 bits (213), Expect = 3e-16
Identities = 40/78 (51%), Positives = 50/78 (63%)
Query: 151 RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFN 210
+D+ KA +YF KAC+L DG GC LG LY G G KD KKA A ++KACDL +S GC
Sbjct: 44 KDYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLNNSGGCGT 103
Query: 211 AGNMYHHGEGATKNFKEA 228
G +Y G+G KN +A
Sbjct: 104 LGMLYEFGQGVEKNLTKA 121
Score = 83.6 bits (205), Expect = 2e-15
Identities = 39/74 (52%), Positives = 51/74 (68%)
Query: 119 KALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSL 178
KA +Y+ KAC+LK GC +LG +Y+ G+ V +DFKKA F KACDLN+ GC LG L
Sbjct: 48 KAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLNNSGGCGTLGML 107
Query: 179 YDAGRGTPKDLKKA 192
Y+ G+G K+L KA
Sbjct: 108 YEFGQGVEKNLTKA 121
Score = 65.9 bits (159), Expect = 5e-10
Identities = 30/64 (46%), Positives = 41/64 (63%)
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDI 282
K++ +A + KACEL++GGGCFNLG + Y GEGV ++ K+A F+K C L G C
Sbjct: 44 KDYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLNNSGGCGT 103
Query: 283 LKQL 286
L L
Sbjct: 104 LGML 107
>gb|AAL47060.1|AF326611_1 (AF326611) JHP318-like protein [Helicobacter pylori]
Length = 131
Score = 149 bits (375), Expect = 5e-35
Identities = 75/131 (57%), Positives = 88/131 (66%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
+G KS K KDFTQAKKYFEKAC+L GC +LG LY QGVEKNL K A FY+KACDL
Sbjct: 1 MGVKSNKAKDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDL 60
Query: 95 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFK 154
N GC LG LY G+GV ++ KA QY SKACDL GC LG +Y GK V ++
Sbjct: 61 NNGVGCKNLGFLYEYGEGVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLT 120
Query: 155 KAVEYFTKACD 165
KA +++KACD
Sbjct: 121 KAAYFYSKACD 131
Score = 115 bits (287), Expect = 7e-25
Identities = 58/130 (44%), Positives = 76/130 (57%), Gaps = 4/130 (3%)
Query: 112 GVSQNTNK----ALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 167
GV N K A +Y+ KAC+L Y GC SLG +Y + + V ++ K +++KACDLN
Sbjct: 2 GVKSNKAKDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDLN 61
Query: 168 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKE 227
+G GC LG LY+ G G KDL KA KACDL + GC G +Y G+G KN +
Sbjct: 62 NGVGCKNLGFLYEYGEGVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTK 121
Query: 228 ALARYSKACE 237
A YSKAC+
Sbjct: 122 AAYFYSKACD 131
Score = 112 bits (280), Expect = 5e-24
Identities = 55/122 (45%), Positives = 74/122 (60%)
Query: 151 RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFN 210
+DF +A +YF KAC+LN G GC LG LY+ +G K+L K Y KACDL + GC N
Sbjct: 9 KDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDLNNGVGCKN 68
Query: 211 AGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 270
G +Y +GEG K+ +A SKAC+L NG GC LG + +G+GV +N +A + K
Sbjct: 69 LGFLYEYGEGVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTKAAYFYSK 128
Query: 271 GC 272
C
Sbjct: 129 AC 130
Score = 79.3 bits (194), Expect = 4e-14
Identities = 38/97 (39%), Positives = 55/97 (56%)
Query: 187 KDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFN 246
KD +A ++KAC+L GC + G++Y + +G KN + YSKAC+L NG GC N
Sbjct: 9 KDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDLNNGVGCKN 68
Query: 247 LGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDIL 283
LG + GEGV ++ +A + K C L CD+L
Sbjct: 69 LGFLYEYGEGVEKDLIKATQYASKACDLNNGSGCDVL 105
>ref|NP_223289.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71914 hypothetical protein jhp0571 - Helicobacter pylori (strain J99)
gb|AAD06154.1| (AE001490) putative [Helicobacter pylori J99]
Length = 352
Score = 124 bits (310), Expect = 2e-27
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 6/266 (2%)
Query: 20 LGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEK 79
L L + ++ + + G K+ D+ A K F ++CD +GCF +G +Y G G++
Sbjct: 58 LDKLGSPENAQTELSAGIDLAKKGDYQGAFKLFSQSCDNGNAAGCFAVGAMYANGVGIQT 117
Query: 80 NLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNK-ALQYYSKACDLKYAEGCAS 138
N KAA +Y C + C L +Y + + N + ALQ Y+ AC C +
Sbjct: 118 NRLKAARYYEMGCSGGDATACANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNN 177
Query: 139 LGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYD- 197
LG ++ +G V +D+ KA+ Y+ +C+ + GC LG + + D K L+ D
Sbjct: 178 LGWMFANGSGVPKDYYKAMSYYKFSCENGNDMGCYNLGLMSNVNNIYGID-KAQLSQVDL 236
Query: 198 --KACDLKDSPGCFNAGNMYHHGE-GATKNFKEALARYSKACELENGGGCFNLGAMQYNG 254
AC+ D GC N G +Y +G+ GA N A + AC+ G C NLG + G
Sbjct: 237 NYLACNAGDMMGCANLGWIYANGDLGAPLNNHYAAKYFQMACDGGILGSCNNLGVLYQKG 296
Query: 255 EGVTRNEKQAIENFKKGCKLGAKGAC 280
GV +++++A++ F C G + +C
Sbjct: 297 LGVPQDDQRALDLFSYACDNGFESSC 322
Score = 90.9 bits (224), Expect = 1e-17
Identities = 65/203 (32%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 38 KSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYS 97
K+ D A + + AC + C NLG ++ G GV K+ KA S+Y +C+
Sbjct: 149 KNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVPKDYYKAMSYYKFSCENGND 208
Query: 98 NGCHLLG------NLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKV-VT 150
GC+ LG N+Y G +Q + L Y AC+ GCA+LG IY +G +
Sbjct: 209 MGCYNLGLMSNVNNIY--GIDKAQLSQVDLNYL--ACNAGDMMGCANLGWIYANGDLGAP 264
Query: 151 RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFN 210
+ A +YF ACD C LG LY G G P+D ++AL + ACD C N
Sbjct: 265 LNNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGVPQDDQRALDLFSYACDNGFESSCRN 324
Query: 211 AGNMYHHGEGATKNFKEALARYS 233
GN H N+ Y+
Sbjct: 325 YGNFKEHLLHVNPNYGRLFMPYN 347
Score = 48.1 bits (113), Expect = 1e-04
Identities = 22/63 (34%), Positives = 35/63 (54%)
Query: 224 NFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDIL 283
+++ A +S++C+ N GCF +GAM NG G+ N +A ++ GC G AC L
Sbjct: 82 DYQGAFKLFSQSCDNGNAAGCFAVGAMYANGVGIQTNRLKAARYYEMGCSGGDATACANL 141
Query: 284 KQL 286
Q+
Sbjct: 142 AQM 144
>gb|AAB47276.1| (U86608) 29 kDa protein [Helicobacter pylori]
Length = 256
Score = 122 bits (307), Expect = 4e-27
Identities = 74/238 (31%), Positives = 121/238 (50%), Gaps = 6/238 (2%)
Query: 13 LCLGALCL-GGLMAE--QDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGV 69
+CL +LCL L AE + + + G ++Y K++ +A +++ A E LG+
Sbjct: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
Query: 70 LYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 129
+Y G+GV K+ KKAA ++ KA D + G + LG +Y G+GV ++ KA++Y+ A +
Sbjct: 71 MYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
Query: 130 LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR---GTP 186
YA +LG +Y +G+ V ++ KA E F KA + + +LG +Y +G G
Sbjct: 131 KGYANAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
Query: 187 KDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC 244
D KA+ Y A D+ S Y +G G K+ K+A KAC+ + C
Sbjct: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYRYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
Score = 82.4 bits (202), Expect = 5e-15
Identities = 57/186 (30%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Query: 105 NLYYSGQGVSQNTN--KALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
N Y G+ N +A +Y A LG +Y +G+ V +D+KKA EYF K
Sbjct: 32 NYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQK 91
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
A D + G LG +Y GRG PKD KKA+ + A + + N G MY G G
Sbjct: 92 AVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVP 151
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGE---GVTRNEKQAIENFKKGCKLGAKGA 279
N+ +A + KA N LG + Y+G G+ ++ +AI +K + + A
Sbjct: 152 SNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRA 211
Query: 280 CDILKQ 285
+ L +
Sbjct: 212 YEGLAE 217
>ref|NP_207908.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||E64659 conserved hypothetical secreted protein HP1117 - Helicobacter
pylori (strain 26695)
gb|AAD08161.1| (AE000618) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 256
Score = 120 bits (301), Expect = 2e-26
Identities = 73/238 (30%), Positives = 120/238 (49%), Gaps = 6/238 (2%)
Query: 13 LCLGALCL-GGLMAE--QDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGV 69
+CL +LCL L AE + + + G ++Y K++ +A +++ A E LG+
Sbjct: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
Query: 70 LYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 129
+Y G+GV K+ KKAA ++ KA D + G + LG +Y G+GV ++ KA++Y+ A +
Sbjct: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
Query: 130 LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR---GTP 186
Y +LG +Y +G+ V ++ KA E F KA + + +LG +Y +G G
Sbjct: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
Query: 187 KDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC 244
D KA+ Y A D+ S Y +G G K+ K+A KAC+ + C
Sbjct: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
Score = 80.1 bits (196), Expect = 3e-14
Identities = 57/186 (30%), Positives = 84/186 (44%), Gaps = 5/186 (2%)
Query: 105 NLYYSGQGVSQNTN--KALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
N Y G+ N +A +Y A LG +Y +G+ V +D KKA EYF K
Sbjct: 32 NYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQK 91
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
A D + G LG +Y GRG PKD KKA+ + A + + N G MY G G
Sbjct: 92 AVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVP 151
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGE---GVTRNEKQAIENFKKGCKLGAKGA 279
N+ +A + KA N LG + Y+G G+ ++ +AI +K + + A
Sbjct: 152 SNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRA 211
Query: 280 CDILKQ 285
+ L +
Sbjct: 212 YEGLAE 217
>ref|NP_223762.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71856 hypothetical protein jhp1045 - Helicobacter pylori (strain J99)
gb|AAD06623.1| (AE001532) putative [Helicobacter pylori J99]
Length = 256
Score = 117 bits (294), Expect = 1e-25
Identities = 69/238 (28%), Positives = 118/238 (48%), Gaps = 6/238 (2%)
Query: 13 LCLGALCLGGLMAEQDPKE---LVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGV 69
+CL LCL + + ++ + G ++Y K++ +A +++ A E+ LG+
Sbjct: 11 ICLVGLCLFSTLGAEHLEQKGNYIYKGEEAYNNKEYERAASFYKSAIKNGESLAYILLGI 70
Query: 70 LYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 129
+Y G+GV K+ KKA ++ KA D + G + LG +Y G+GV ++ KA++Y+ A +
Sbjct: 71 MYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATE 130
Query: 130 LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR---GTP 186
Y +LG +Y +G+ V ++ KA E F KA + + +LG +Y +G G
Sbjct: 131 KGYTNAYINLGIMYMEGRGVPSNYAKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
Query: 187 KDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC 244
D KA+ Y A D+ S Y +G G K+ K+A KAC+ + C
Sbjct: 191 PDKDKAVVYYKMAADVSSSRAYEGLSESYRYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
Score = 85.9 bits (211), Expect = 5e-16
Identities = 60/189 (31%), Positives = 91/189 (47%), Gaps = 9/189 (4%)
Query: 104 GNLYYSGQGVSQNTN--KALQYYSKACDLKYAEGCAS--LGGIYHDGKVVTRDFKKAVEY 159
GN Y G+ N +A +Y A +K E A LG +Y +G+ V +D+KKAVEY
Sbjct: 31 GNYIYKGEEAYNNKEYERAASFYKSA--IKNGESLAYILLGIMYENGRGVPKDYKKAVEY 88
Query: 160 FTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGE 219
F KA D + G LG +Y G+G PKD KKA+ + A + + N G MY G
Sbjct: 89 FQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR 148
Query: 220 GATKNFKEALARYSKACELENGGGCFNLGAMQYNGE---GVTRNEKQAIENFKKGCKLGA 276
G N+ +A + KA N LG + Y+G G+ ++ +A+ +K + +
Sbjct: 149 GVPSNYAKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAVVYYKMAADVSS 208
Query: 277 KGACDILKQ 285
A + L +
Sbjct: 209 SRAYEGLSE 217
>ref|NP_207134.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||H64561 invalid gene - Helicobacter pylori (strain 26695)
gb|AAD07408.1| (AE000551) H. pylori predicted coding region HP0336 [Helicobacter
pylori 26695]
Length = 138
Score = 117 bits (293), Expect = 1e-25
Identities = 61/136 (44%), Positives = 80/136 (57%), Gaps = 8/136 (5%)
Query: 74 GQGVEKNLKKAASFYAKACDLNYSNGC-HLLGNLYYSGQGVSQNTNKALQYYSKACDLKY 132
G V+K+LKKA +Y KAC+LN GC L+ N N K QY SKAC+L
Sbjct: 4 GGTVKKDLKKAIQYYVKACELNEMFGCLSLVSNSQI-------NKQKLFQYLSKACELNS 56
Query: 133 AEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKA 192
GC LG Y +GK V +D +KA +Y++KAC LND DGC ILG AG+G K+ K+A
Sbjct: 57 GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQA 116
Query: 193 LASYDKACDLKDSPGC 208
+ +++KAC L C
Sbjct: 117 VKTFEKACRLGSEDAC 132
Score = 114 bits (284), Expect = 2e-24
Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 6/138 (4%)
Query: 146 GKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS 205
G V +D KKA++Y+ KAC+LN+ GC L S + +K KAC+L
Sbjct: 4 GGTVKKDLKKAIQYYVKACELNEMFGCLSLVSNSQINK------QKLFQYLSKACELNSG 57
Query: 206 PGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAI 265
GC G+ Y +G+ K+ ++A YSKAC L + GC LG QY G+GV +NEKQA+
Sbjct: 58 NGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAV 117
Query: 266 ENFKKGCKLGAKGACDIL 283
+ F+K C+LG++ AC IL
Sbjct: 118 KTFEKACRLGSEDACGIL 135
Score = 106 bits (264), Expect = 3e-22
Identities = 56/136 (41%), Positives = 79/136 (57%), Gaps = 6/136 (4%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
+KD +A +Y+ KAC+L E GC +L + N +K + +KAC+LN NGC
Sbjct: 8 KKDLKKAIQYYVKACELNEMFGCLSLV------SNSQINKQKLFQYLSKACELNSGNGCR 61
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
LG+ Y +G+ V ++ KA QYYSKAC L +GC LG + GK V ++ K+AV+ F
Sbjct: 62 FLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFE 121
Query: 162 KACDLNDGDGCTILGS 177
KAC L D C IL +
Sbjct: 122 KACRLGSEDACGILNN 137
Score = 62.0 bits (149), Expect = 7e-09
Identities = 28/66 (42%), Positives = 38/66 (57%)
Query: 40 YKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNG 99
Y +KD +A +Y+ KAC L + GC LG Y G+GV KN K+A + KAC L +
Sbjct: 72 YVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGSEDA 131
Query: 100 CHLLGN 105
C +L N
Sbjct: 132 CGILNN 137
>ref|NP_459646.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL19605.1| (AE008726) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 331
Score = 105 bits (263), Expect = 4e-22
Identities = 55/192 (28%), Positives = 100/192 (51%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
D+ QA ++ K + N +NLG +Y+ G GVE+N +A ++ +A + L
Sbjct: 119 DYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERL 178
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
+Y +G+G +N + A +Y K+ + + +G Y+ GK + +D+++A+ +F KA
Sbjct: 179 AYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKA 238
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATK 223
D D D +G +Y G G ++ AL + K+ + +S G +N G MY G G +
Sbjct: 239 ADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQ 298
Query: 224 NFKEALARYSKA 235
+ ++AL + KA
Sbjct: 299 DLQQALYWFKKA 310
Score = 101 bits (252), Expect = 8e-21
Identities = 66/248 (26%), Positives = 117/248 (46%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
KD T A + EKA LG + G+ + +A ++Y K + +++ +
Sbjct: 82 KDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYN 141
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
LG +Y+SG GV QN +AL ++ +A + L +Y +GK ++ A ++ K
Sbjct: 142 LGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKK 201
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
+ +G Y G+G +D ++A+ + KA D D + G MY G G
Sbjct: 202 SALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAADQGDDDAYNSIGWMYKCGHGVE 261
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDI 282
+N+ AL + K+ E N G +NLG M +G G ++ +QA+ FKK G +
Sbjct: 262 QNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKAQPTGKWNVDEE 321
Query: 283 LKQLKIKV 290
+++L+ ++
Sbjct: 322 IRKLEAQL 329
Score = 60.5 bits (145), Expect = 2e-08
Identities = 32/95 (33%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 33 VGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKAC 92
+G G K +D+ QA +F KA D ++ ++G +Y G GVE+N A ++ K+
Sbjct: 220 IGKGIK----QDYQQAIYWFRKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSA 275
Query: 93 DLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKA 127
+ N S+G + LG +Y G G +Q+ +AL ++ KA
Sbjct: 276 ECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKA 310
Score = 53.5 bits (127), Expect = 3e-06
Identities = 45/176 (25%), Positives = 73/176 (40%), Gaps = 3/176 (1%)
Query: 97 SNGCHLLGNLYYSGQGVSQNTNKALQYY--SKACDLKYAEGCASLGGIYHDGKVVTRDFK 154
S ++LG LY + + + + L +Y +A + + E LG Y D +D
Sbjct: 27 SEAQYILGRLY-NDERIDGSEEDKLSFYWLQQAAEQGHCEAQYWLGLRYKDTPTDMKDNT 85
Query: 155 KAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNM 214
A+ + KA LG + + G D +A+A Y K + + +N G M
Sbjct: 86 LALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRM 145
Query: 215 YHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 270
YH G G +N +AL + +A + L M NG+G +N A +KK
Sbjct: 146 YHSGTGVEQNDTQALYWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKK 201
>ref|NP_281603.1| (NC_002163) putative periplasmic protein [Campylobacter jejuni]
pir||C81385 probable periplasmic protein Cj0413 [imported] - Campylobacter
jejuni (strain NCTC 11168)
emb|CAB74249.1| (AL139075) putative periplasmic protein [Campylobacter jejuni]
Length = 234
Score = 105 bits (261), Expect = 8e-22
Identities = 63/209 (30%), Positives = 101/209 (48%), Gaps = 11/209 (5%)
Query: 36 GAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN 95
G K Y+ F +A + F+ C+ + CF+L ++ +GV K+L +A FY KAC L
Sbjct: 23 GLKLYEANKFDKAYEIFKSLCEKDISKACFSLAFMHESARGVSKDLNQAYKFYDKACKLG 82
Query: 96 YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKK 155
+N C + L QG N+AL ++KAC L + C ++ Y K D +
Sbjct: 83 LANACSNMA-LLLQNQGYE---NEALLAFNKACTLGESLSCNNIALFYEKEK----DGQM 134
Query: 156 AVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMY 215
A ++ ++CDL + C LGSLYD G +K ALA Y K+C L C+ G
Sbjct: 135 ASSFYKRSCDLKNARACYQLGSLYDKGELVKASVKSALAFYSKSCTLGFGEACYLLG--- 191
Query: 216 HHGEGATKNFKEALARYSKACELENGGGC 244
+ + ++ +A + AC+ ++ C
Sbjct: 192 RYNQLEKQDLTKAKRYFGMACDQKHQEAC 220
Score = 100 bits (249), Expect = 2e-20
Identities = 65/211 (30%), Positives = 104/211 (48%), Gaps = 19/211 (9%)
Query: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
KA + C+ + S C L ++ S +GVS++ N+A ++Y KAC L A C+++ +
Sbjct: 34 KAYEIFKSLCEKDISKACFSLAFMHESARGVSKDLNQAYKFYDKACKLGLANACSNMALL 93
Query: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
+ +A+ F KAC L + C + Y+ KD + A + Y ++CDL
Sbjct: 94 LQNQGYEN----EALLAFNKACTLGESLSCNNIALFYEK----EKDGQMASSFYKRSCDL 145
Query: 203 KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEK 262
K++ C+ G++Y GE + K ALA YSK+C L G C+ LG +YN + EK
Sbjct: 146 KNARACYQLGSLYDKGELVKASVKSALAFYSKSCTLGFGEACYLLG--RYN-----QLEK 198
Query: 263 QAIENFKK----GCKLGAKGACDILKQLKIK 289
Q + K+ C + AC K+L K
Sbjct: 199 QDLTKAKRYFGMACDQKHQEACAAYKELNSK 229
Score = 84.7 bits (208), Expect = 1e-15
Identities = 39/98 (39%), Positives = 60/98 (60%), Gaps = 3/98 (3%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGC 100
KEKD A +++++CDLK C+ LG LY +G+ V+ ++K A +FY+K+C L + C
Sbjct: 128 KEKDGQMASSFYKRSCDLKNARACYQLGSLYDKGELVKASVKSALAFYSKSCTLGFGEAC 187
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCAS 138
+LLG Q Q+ KA +Y+ ACD K+ E CA+
Sbjct: 188 YLLGRY---NQLEKQDLTKAKRYFGMACDQKHQEACAA 222
Score = 70.1 bits (170), Expect = 3e-11
Identities = 45/159 (28%), Positives = 70/159 (43%), Gaps = 28/159 (17%)
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAG 212
F KA E F C+ + C L ++++ RG KDL +A YDKAC L + C N
Sbjct: 32 FDKAYEIFKSLCEKDISKACFSLAFMHESARGVSKDLNQAYKFYDKACKLGLANACSNMA 91
Query: 213 NMYHH-----------------GEGAT-----------KNFKEALARYSKACELENGGGC 244
+ + GE + K+ + A + Y ++C+L+N C
Sbjct: 92 LLLQNQGYENEALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLKNARAC 151
Query: 245 FNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDIL 283
+ LG++ GE V + K A+ + K C LG AC +L
Sbjct: 152 YQLGSLYDKGELVKASVKSALAFYSKSCTLGFGEACYLL 190
>gb|AAL83953.1|AF354056_1 (AF354056) temperature-induced protein [Helicobacter pylori]
Length = 112
Score = 104 bits (260), Expect = 1e-21
Identities = 56/110 (50%), Positives = 71/110 (63%), Gaps = 9/110 (8%)
Query: 1 MLENVKKSFFRVLCLGALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE 60
ML VKK+ FRVLCLGALCLGGLMAE +PKEL+ G Y +KDFT+AK+YFEKAC L +
Sbjct: 1 MLRGVKKATFRVLCLGALCLGGLMAESNPKELIFSGITIYTDKDFTRAKEYFEKACRLND 60
Query: 61 NSGCFNLGVLYYQG-------QGVEKNLKKAASFYAKACDLNYSNGCHLL 103
GC L +Y + + +EK L+ A+ AKAC+L C +L
Sbjct: 61 ADGCTILREIYSKAIMRENARESIEKALEHTAT--AKACELELREACGIL 108
Score = 50.4 bits (119), Expect = 2e-05
Identities = 27/63 (42%), Positives = 36/63 (56%), Gaps = 5/63 (7%)
Query: 151 RDFKKAVEYFTKACDLNDGDGCTILGSLYDAG---RGTPKDLKKAL--ASYDKACDLKDS 205
+DF +A EYF KAC LND DGCTIL +Y + ++KAL + KAC+L+
Sbjct: 43 KDFTRAKEYFEKACRLNDADGCTILREIYSKAIMRENARESIEKALEHTATAKACELELR 102
Query: 206 PGC 208
C
Sbjct: 103 EAC 105
>gb|EAA06387.1| (AAAB01008846) agCP13101 [Anopheles gambiae str. PEST]
Length = 849
Score = 97.8 bits (242), Expect = 1e-19
Identities = 65/175 (37%), Positives = 94/175 (53%), Gaps = 2/175 (1%)
Query: 103 LGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKV-VTRDFKKAVEYF 160
LG L+Y G +G+ + +ALQY+S+A + A A LG IY +G + D + A +YF
Sbjct: 383 LGQLHYQGGRGIPLDHQRALQYFSQAANAGNAVAMAFLGKIYLEGSDNIKADNETAFKYF 442
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEG 220
KA DL + G + LG +Y G+G KD KAL + KA D G GNMY+ G G
Sbjct: 443 KKAADLGNPVGQSGLGIMYLHGKGVRKDTGKALKYFAKAADQGWVDGQLQLGNMYYSGIG 502
Query: 221 ATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
++FK A+ +S A + + +NLG M G G+ R+ A+E FK + G
Sbjct: 503 VQRDFKLAIKYFSLASQSGHVLAFYNLGQMHAIGLGMIRSCPTAVELFKNVAERG 557
Score = 82.8 bits (203), Expect = 4e-15
Identities = 56/186 (30%), Positives = 93/186 (49%), Gaps = 7/186 (3%)
Query: 23 LMAEQ-DPKELVGLGAKSYK-----EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQ- 75
L+A++ D + VGLG Y+ D +A +YF +A + LG +Y +G
Sbjct: 370 LLADKGDVQAQVGLGQLHYQGGRGIPLDHQRALQYFSQAANAGNAVAMAFLGKIYLEGSD 429
Query: 76 GVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEG 135
++ + + A ++ KA DL G LG +Y G+GV ++T KAL+Y++KA D + +G
Sbjct: 430 NIKADNETAFKYFKKAADLGNPVGQSGLGIMYLHGKGVRKDTGKALKYFAKAADQGWVDG 489
Query: 136 CASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALAS 195
LG +Y+ G V RDFK A++YF+ A LG ++ G G + A+
Sbjct: 490 QLQLGNMYYSGIGVQRDFKLAIKYFSLASQSGHVLAFYNLGQMHAIGLGMIRSCPTAVEL 549
Query: 196 YDKACD 201
+ +
Sbjct: 550 FKNVAE 555
Score = 79.3 bits (194), Expect = 4e-14
Identities = 77/281 (27%), Positives = 114/281 (40%), Gaps = 50/281 (17%)
Query: 44 DFTQAKKYF-EKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
D AK+ F E A D ++ LG +Y G G + KA +Y A S
Sbjct: 242 DIESAKRTFLELAADGLPDAQ-MGLGFMYSAGIGFNVSQAKALLYYTLAAAGENSWAQMA 300
Query: 103 LGNLYYSGQGVSQNTNKALQYYSK-----ACDLKYAEGCA-------------------- 137
LG Y++G GV + AL YY K A + ++ G A
Sbjct: 301 LGYRYWAGVGVPNSCETALDYYRKVATKVASQVTFSGGAAVHRIRLLDEVDNSGPSSGIL 360
Query: 138 ---------------------SLGGI-YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTIL 175
LG + Y G+ + D ++A++YF++A + + L
Sbjct: 361 DNDLIDYYQLLADKGDVQAQVGLGQLHYQGGRGIPLDHQRALQYFSQAANAGNAVAMAFL 420
Query: 176 GSLYDAGRGTPK-DLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
G +Y G K D + A + KA DL + G G MY HG+G K+ +AL ++K
Sbjct: 421 GKIYLEGSDNIKADNETAFKYFKKAADLGNPVGQSGLGIMYLHGKGVRKDTGKALKYFAK 480
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
A + G LG M Y+G GV R+ K AI+ F + G
Sbjct: 481 AADQGWVDGQLQLGNMYYSGIGVQRDFKLAIKYFSLASQSG 521
>ref|NP_586349.1| (NC_003237) similarity to SKT5 PROTEIN [Encephalitozoon cuniculi]
emb|CAD25953.1| (AL590450) similarity to SKT5 PROTEIN [Encephalitozoon cuniculi]
Length = 590
Score = 97.4 bits (241), Expect = 2e-19
Identities = 64/228 (28%), Positives = 104/228 (45%)
Query: 48 AKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 107
A KY+ + LG + +G GVE+N + A + A + S + +G Y
Sbjct: 156 AVKYYSEGAYEGNTCSIGILGYCFLKGFGVERNEEIAVELFKYASEKKDSTALYNIGFCY 215
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 167
G+GV +N KA + Y + ++ + +LG Y +GK V RD +KA E + K+
Sbjct: 216 EEGRGVERNLIKAFEMYRLSAKMENSYAQNALGNCYEEGKGVDRDLQKAFELYKKSALQG 275
Query: 168 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKE 227
G L Y G GT ++L+KA Y +A S N G Y +G G + +
Sbjct: 276 YPSGQCNLAFCYQKGIGTERNLEKAFEWYKRAAIQGLSRAKHNIGYCYQNGLGTSPCMRS 335
Query: 228 ALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
A+ Y ++ +N LG +G GV ++E+ A+ F +G + G
Sbjct: 336 AVNWYKESAAEDNKYSIHALGVCYQHGYGVPKDERLAVRYFSEGVRAG 383
Score = 96.3 bits (238), Expect = 4e-19
Identities = 69/244 (28%), Positives = 110/244 (44%), Gaps = 4/244 (1%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
++D +A + ++K+ SG NL Y +G G E+NL+KA +Y +A S H
Sbjct: 258 DRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGTERNLEKAFEWYKRAAIQGLSRAKH 317
Query: 102 LLGNLYYSGQGVSQNTNKALQYY--SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEY 159
+G Y +G G S A+ +Y S A D KY+ +LG Y G V +D + AV Y
Sbjct: 318 NIGYCYQNGLGTSPCMRSAVNWYKESAAEDNKYS--IHALGVCYQHGYGVPKDERLAVRY 375
Query: 160 FTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGE 219
F++ + L Y +G G +K+ A +A ++ +S G Y G
Sbjct: 376 FSEGVRAGFDEAIISLALCYRSGIGVRISPEKSFALMKRAAEMNNSSAQNTLGYYYEEGY 435
Query: 220 GATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGA 279
G KN ++A+ Y + + N FNL + NG V +++ I + LG A
Sbjct: 436 GTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNHVPADKELGIRLLIRSRDLGNPRA 495
Query: 280 CDIL 283
+ L
Sbjct: 496 MNTL 499
Score = 92.8 bits (229), Expect = 4e-18
Identities = 61/242 (25%), Positives = 110/242 (45%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
E++ A + F+ A + K+++ +N+G Y +G+GVE+NL KA Y + + S +
Sbjct: 186 ERNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYRLSAKMENSYAQN 245
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
LGN Y G+GV ++ KA + Y K+ Y G +L Y G R+ +KA E++
Sbjct: 246 ALGNCYEEGKGVDRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGTERNLEKAFEWYK 305
Query: 162 KACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGA 221
+A +G Y G GT ++ A+ Y ++ + G Y HG G
Sbjct: 306 RAAIQGLSRAKHNIGYCYQNGLGTSPCMRSAVNWYKESAAEDNKYSIHALGVCYQHGYGV 365
Query: 222 TKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
K+ + A+ +S+ +L +G GV + +++ K+ ++ A +
Sbjct: 366 PKDERLAVRYFSEGVRAGFDEAIISLALCYRSGIGVRISPEKSFALMKRAAEMNNSSAQN 425
Query: 282 IL 283
L
Sbjct: 426 TL 427
Score = 84.7 bits (208), Expect = 1e-15
Identities = 55/234 (23%), Positives = 106/234 (44%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
E++ +A +++++A + N+G Y G G ++ A ++Y ++ + H
Sbjct: 294 ERNLEKAFEWYKRAAIQGLSRAKHNIGYCYQNGLGTSPCMRSAVNWYKESAAEDNKYSIH 353
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
LG Y G GV ++ A++Y+S+ + E SL Y G V +K+
Sbjct: 354 ALGVCYQHGYGVPKDERLAVRYFSEGVRAGFDEAIISLALCYRSGIGVRISPEKSFALMK 413
Query: 162 KACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGA 221
+A ++N+ LG Y+ G GTPK+L+KA+ Y+ + +S FN +Y +G
Sbjct: 414 RAAEMNNSSAQNTLGYYYEEGYGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNHV 473
Query: 222 TKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
+ + + ++ +L N LG G V ++ + A E++ + G
Sbjct: 474 PADKELGIRLLIRSRDLGNPRAMNTLGYCFEKGIVVGKDPRLAFEHYTQALMNG 527
Score = 80.1 bits (196), Expect = 3e-14
Identities = 52/232 (22%), Positives = 103/232 (43%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
E++ +A + + + ++ + LG Y +G+GV+++L+KA Y K+ Y +G
Sbjct: 222 ERNLIKAFEMYRLSAKMENSYAQNALGNCYEEGKGVDRDLQKAFELYKKSALQGYPSGQC 281
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
L Y G G +N KA ++Y +A + ++G Y +G + + AV ++
Sbjct: 282 NLAFCYQKGIGTERNLEKAFEWYKRAAIQGLSRAKHNIGYCYQNGLGTSPCMRSAVNWYK 341
Query: 162 KACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGA 221
++ ++ LG Y G G PKD + A+ + + + Y G G
Sbjct: 342 ESAAEDNKYSIHALGVCYQHGYGVPKDERLAVRYFSEGVRAGFDEAIISLALCYRSGIGV 401
Query: 222 TKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCK 273
+ +++ A +A E+ N LG G G +N ++A++ ++ K
Sbjct: 402 RISPEKSFALMKRAAEMNNSSAQNTLGYYYEEGYGTPKNLRKAVKWYETSAK 453
Score = 71.6 bits (174), Expect = 9e-12
Identities = 55/197 (27%), Positives = 83/197 (41%), Gaps = 10/197 (5%)
Query: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
K + YA+ C LG Y G GV + A++YYS+ LG
Sbjct: 129 KHGNLYARYC----------LGVCYQEGYGVPVDPLLAVKYYSEGAYEGNTCSIGILGYC 178
Query: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
+ G V R+ + AVE F A + D +G Y+ GRG ++L KA Y + +
Sbjct: 179 FLKGFGVERNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYRLSAKM 238
Query: 203 KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEK 262
++S GN Y G+G ++ ++A Y K+ G NL G G RN +
Sbjct: 239 ENSYAQNALGNCYEEGKGVDRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGTERNLE 298
Query: 263 QAIENFKKGCKLGAKGA 279
+A E +K+ G A
Sbjct: 299 KAFEWYKRAAIQGLSRA 315
Score = 65.9 bits (159), Expect = 5e-10
Identities = 49/220 (22%), Positives = 93/220 (42%)
Query: 67 LGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSK 126
LGV Y G GV K+ + A ++++ + L Y SG GV + K+ +
Sbjct: 355 LGVCYQHGYGVPKDERLAVRYFSEGVRAGFDEAIISLALCYRSGIGVRISPEKSFALMKR 414
Query: 127 ACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTP 186
A ++ + +LG Y +G ++ +KAV+++ + N+ L +LY G P
Sbjct: 415 AAEMNNSSAQNTLGYYYEEGYGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNHVP 474
Query: 187 KDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFN 246
D + + ++ DL + G + G K+ + A Y++A ++
Sbjct: 475 ADKELGIRLLIRSRDLGNPRAMNTLGYCFEKGIVVGKDPRLAFEHYTQALMNGYSKAGYS 534
Query: 247 LGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQL 286
LG +G G + +A+ F K G + + LK++
Sbjct: 535 LGRCYESGIGTEVDLDKALYYFYKASSAGEEASLQRLKKI 574
Score = 65.1 bits (157), Expect = 9e-10
Identities = 73/285 (25%), Positives = 119/285 (41%), Gaps = 35/285 (12%)
Query: 21 GGLMAEQDPKELVGLGAKSYKEKDFTQ-AKKYFEKACDLKENSGCFNLGVLYYQGQGVEK 79
G M+ + L+G+G + +E + A L ++ C+ G+ G
Sbjct: 11 GRKMSREADVVLLGVGREKNEELGLKMHLENSARDANSLAVSAFCYEFGI------GTSV 64
Query: 80 NLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNT---NKALQYYSKACDLK----- 131
++KKA Y KA + NG L+ + G T +A +Y K L
Sbjct: 65 DMKKAEMRYTKAALSD--NGLALIRLAFIRRFGRPTATIDRREAKRYLDKLKRLGRRGVE 122
Query: 132 -----------YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTI--LGSL 178
YA C LG Y +G V D AV+Y+++ +G+ C+I LG
Sbjct: 123 WLVYANKHGNLYARYC--LGVCYQEGYGVPVDPLLAVKYYSEGA--YEGNTCSIGILGYC 178
Query: 179 YDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL 238
+ G G ++ + A+ + A + KDS +N G Y G G +N +A Y + ++
Sbjct: 179 FLKGFGVERNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYRLSAKM 238
Query: 239 ENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG-AKGACDI 282
EN LG G+GV R+ ++A E +KK G G C++
Sbjct: 239 ENSYAQNALGNCYEEGKGVDRDLQKAFELYKKSALQGYPSGQCNL 283
Score = 52.0 bits (123), Expect = 8e-06
Identities = 33/121 (27%), Positives = 54/121 (44%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
K+ +A K++E + + FNL LY G V + + ++ DL +
Sbjct: 439 KNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNHVPADKELGIRLLIRSRDLGNPRAMNT 498
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
LG + G V ++ A ++Y++A Y++ SLG Y G D KA+ YF K
Sbjct: 499 LGYCFEKGIVVGKDPRLAFEHYTQALMNGYSKAGYSLGRCYESGIGTEVDLDKALYYFYK 558
Query: 163 A 163
A
Sbjct: 559 A 559
>ref|NP_651179.1| (NM_142922) BcDNA:LD23587 gene product [Drosophila melanogaster]
gb|AAD55437.1|AF181652_1 (AF181652) BcDNA.LD23587 [Drosophila melanogaster]
gb|AAF56178.1| (AE003744) BcDNA:LD23587 gene product [Drosophila melanogaster]
Length = 819
Score = 95.1 bits (235), Expect = 8e-19
Identities = 63/169 (37%), Positives = 88/169 (51%), Gaps = 2/169 (1%)
Query: 103 LGNLYYSGQGVS-QNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTR-DFKKAVEYF 160
LG +YY G V+ Q+ KAL+Y+ A D A G A LG +Y +G R D A YF
Sbjct: 339 LGQVYYQGGKVTEQDHQKALEYFKMAADAGSAVGIAFLGKLYLEGSDQIRADNDAAFGYF 398
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEG 220
+KA ++ D G + LG +Y G G PKD KAL+ + +A D G GNMY G G
Sbjct: 399 SKAAEMGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGNMYFTGNG 458
Query: 221 ATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFK 269
++K A ++ A + + +NLG M G G+ R+ A+E FK
Sbjct: 459 VKTDYKLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFK 507
Score = 83.6 bits (205), Expect = 2e-15
Identities = 64/247 (25%), Positives = 105/247 (41%), Gaps = 2/247 (0%)
Query: 46 TQAKKYFEKACDLKENSGCFNLGVLYYQGQGV-EKNLKKAASFYAKACDLNYSNGCHLLG 104
T+ Y++ D + LG +YYQG V E++ +KA ++ A D + G LG
Sbjct: 318 TEIVDYYKLLADKGDIQSQVGLGQVYYQGGKVTEQDHQKALEYFKMAADAGSAVGIAFLG 377
Query: 105 NLYYSGQG-VSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
LY G + + + A Y+SKA ++ G + LG +Y G V +D KA+ YFT+A
Sbjct: 378 KLYLEGSDQIRADNDAAFGYFSKAAEMGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQA 437
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATK 223
D DG LG++Y G G D K A ++ A +N G M +G G +
Sbjct: 438 ADQGWVDGQLQLGNMYFTGNGVKTDYKLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLR 497
Query: 224 NFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDIL 283
+ A+ + E + Y + Q + G ++ A +L
Sbjct: 498 SCPAAVEFFKTVSERGRWSSRLMMAYSDYKNNRIDEAYMQYSLMAEMGYEVAQSNAAFLL 557
Query: 284 KQLKIKV 290
+ ++ V
Sbjct: 558 DRKEVHV 564
Score = 75.9 bits (185), Expect = 5e-13
Identities = 61/223 (27%), Positives = 102/223 (45%), Gaps = 11/223 (4%)
Query: 23 LMAEQ-DPKELVGLGAKSYK-----EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQG 76
L+A++ D + VGLG Y+ E+D +A +YF+ A D G LG LY +G
Sbjct: 326 LLADKGDIQSQVGLGQVYYQGGKVTEQDHQKALEYFKMAADAGSAVGIAFLGKLYLEGSD 385
Query: 77 -VEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEG 135
+ + A +++KA ++ G LG +Y G GV +++ KAL Y+++A D + +G
Sbjct: 386 QIRADNDAAFGYFSKAAEMGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDG 445
Query: 136 CASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALAS 195
LG +Y G V D+K A +YF A LG + G G + A+
Sbjct: 446 QLQLGNMYFTGNGVKTDYKLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEF 505
Query: 196 YDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL 238
+ + G +++ M + + EA +YS E+
Sbjct: 506 FKTVSE----RGRWSSRLMMAYSDYKNNRIDEAYMQYSLMAEM 544
>gb|AAF45339.1| (AE003066) CG13865 gene product [Drosophila melanogaster]
gb|AAM52744.1| (AY122232) RE58665p [Drosophila melanogaster]
Length = 266
Score = 94.7 bits (234), Expect = 1e-18
Identities = 74/254 (29%), Positives = 113/254 (44%), Gaps = 37/254 (14%)
Query: 39 SYKEKDFTQAKKYFEKACDLKENSGCFN------LGVLYYQGQGVEKNLKKAASFYAKAC 92
+Y K + K+Y EK ++ GC++ +L +G++K+ +KA+ Y C
Sbjct: 2 AYDLKKESDVKEYVEKL-GVEYRFGCYSEKKPEACHLLGDYLEGIKKDFEKASKVYKSTC 60
Query: 93 D-LNYSNGCHLLGNLYYSGQGVSQ---NTNKALQYYSKACDLKYAEGCASLGGIYHDGKV 148
D Y+ C+ GN + G+G S N A +YY K C+L ++ C G+ K
Sbjct: 61 DDYGYAKSCYKYGNYSFLGKGKSGSKGNPQVAYEYYEKGCNLNDSDACLH-SGLLLVSKS 119
Query: 149 VTRDFK----KAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACD--- 201
+ R+ K +E+ TK+CDLN+ C L ++ +G D AS
Sbjct: 120 MPREIDWNVPKGLEFLTKSCDLNNATACFYLSGMHISGVQKKADQSAVTASSGSGTSSPP 179
Query: 202 -----LKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEG 256
LKDS K+ K+A KACEL N C NL M G+G
Sbjct: 180 AGQPPLKDSDYI------------VLKDMKKAFQFAHKACELRNMYACANLSQMYARGDG 227
Query: 257 VTRNEKQAIENFKK 270
+ +NEK+A E +KK
Sbjct: 228 IEKNEKEA-EKYKK 240
Score = 64.3 bits (155), Expect = 1e-09
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 24/199 (12%)
Query: 100 CHLLGNLYYSGQGVSQNTNKALQYYSKACD-LKYAEGCASLGGIYHDGKVVTRDF---KK 155
CHLLG+ +G+ ++ KA + Y CD YA+ C G GK + +
Sbjct: 35 CHLLGDYL---EGIKKDFEKASKVYKSTCDDYGYAKSCYKYGNYSFLGKGKSGSKGNPQV 91
Query: 156 AVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLK----KALASYDKACDLKDSPGCFNA 211
A EY+ K C+LND D C G L + P+++ K L K+CDL ++ CF
Sbjct: 92 AYEYYEKGCNLNDSDACLHSGLLL-VSKSMPREIDWNVPKGLEFLTKSCDLNNATACFYL 150
Query: 212 GNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGA----MQYNGEGVTRNEKQAIEN 267
M H G K ++ A +G G + A ++ + V ++ K+A +
Sbjct: 151 SGM--HISGVQKKADQS------AVTASSGSGTSSPPAGQPPLKDSDYIVLKDMKKAFQF 202
Query: 268 FKKGCKLGAKGACDILKQL 286
K C+L AC L Q+
Sbjct: 203 AHKACELRNMYACANLSQM 221
>gb|AAD05210.1| (AF063095) SELlL [Mus musculus]
gb|AAH26816.1| (BC026816) Sel1 (suppressor of lin-12) 1 homolog (C. elegans) [Mus
musculus]
Length = 740
Score = 94.0 bits (232), Expect = 2e-18
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 57 DLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY-YSGQGVSQ 115
D EN G N G+L E++L + F A+ D+ G LG L+ + G+GV Q
Sbjct: 290 DEVENPG-MNSGML-------EEDLIQYYQFLAEKGDVQAQVG---LGQLHLHGGRGVEQ 338
Query: 116 NTNKALQYYSKACDLKYAEGCASLGGIYHDGK-VVTRDFKKAVEYFTKACDLNDGDGCTI 174
N +A Y++ A + + A LG +Y +G +V + + A+ YF KA D+ + G +
Sbjct: 339 NHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSG 398
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
LG Y GRG + AL + KA + G G+MY++G G +++K+AL ++
Sbjct: 399 LGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNL 458
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
A + + +NL M +G GV R+ A+E FK C+ G
Sbjct: 459 ASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 499
Score = 73.2 bits (178), Expect = 3e-12
Identities = 64/271 (23%), Positives = 109/271 (39%), Gaps = 41/271 (15%)
Query: 48 AKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 107
A YF+KA D+ G LG+ Y G+GV+ N A ++ KA + + +G LG++Y
Sbjct: 380 ALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMY 439
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKAC--- 164
Y+G GV ++ +AL+Y++ A + +L ++ G V R AVE F C
Sbjct: 440 YNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 499
Query: 165 ---------------------------------DLNDGDGCTILGSLYDAGRGTPKDLKK 191
++ + IL G + +
Sbjct: 500 RWSERLMTAYNSYKDEDYNAAVVQYLLLAEQGYEVAQSNAAFILDQREATIVGENETYPR 559
Query: 192 ALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGG-GCFNLGAM 250
AL +++A + G+ + +G G +++ A Y A E ++ FNLG M
Sbjct: 560 ALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYM 619
Query: 251 QYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
G G+ KQ I K+ + A+ + D
Sbjct: 620 HEKGLGI----KQDIHLAKRFYDMAAEASPD 646
>ref|XP_127076.1| (XM_127076) similar to Sel-1 homolog precursor (Suppressor of
lin-12-like protein) (Sel-1L) [Mus musculus]
sp|Q9Z2G6|SE1L_MOUSE Sel-1 homolog precursor (Suppressor of lin-12-like protein)
(Sel-1L)
dbj|BAB23750.1| (AK005023) Sel1 (suppressor of lin-12) 1 homolog (C. elegans)~data
source:MGD, source key:MGI:1329016,
evidence:ISS~putative [Mus musculus]
Length = 790
Score = 94.0 bits (232), Expect = 2e-18
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 57 DLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY-YSGQGVSQ 115
D EN G N G+L E++L + F A+ D+ G LG L+ + G+GV Q
Sbjct: 340 DEVENPG-MNSGML-------EEDLIQYYQFLAEKGDVQAQVG---LGQLHLHGGRGVEQ 388
Query: 116 NTNKALQYYSKACDLKYAEGCASLGGIYHDGK-VVTRDFKKAVEYFTKACDLNDGDGCTI 174
N +A Y++ A + + A LG +Y +G +V + + A+ YF KA D+ + G +
Sbjct: 389 NHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSG 448
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
LG Y GRG + AL + KA + G G+MY++G G +++K+AL ++
Sbjct: 449 LGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNL 508
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
A + + +NL M +G GV R+ A+E FK C+ G
Sbjct: 509 ASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 549
Score = 73.2 bits (178), Expect = 3e-12
Identities = 64/271 (23%), Positives = 109/271 (39%), Gaps = 41/271 (15%)
Query: 48 AKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 107
A YF+KA D+ G LG+ Y G+GV+ N A ++ KA + + +G LG++Y
Sbjct: 430 ALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMY 489
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKAC--- 164
Y+G GV ++ +AL+Y++ A + +L ++ G V R AVE F C
Sbjct: 490 YNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 549
Query: 165 ---------------------------------DLNDGDGCTILGSLYDAGRGTPKDLKK 191
++ + IL G + +
Sbjct: 550 RWSERLMTAYNSYKDEDYNAAVVQYLLLAEQGYEVAQSNAAFILDQREATIVGENETYPR 609
Query: 192 ALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGG-GCFNLGAM 250
AL +++A + G+ + +G G +++ A Y A E ++ FNLG M
Sbjct: 610 ALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYM 669
Query: 251 QYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
G G+ KQ I K+ + A+ + D
Sbjct: 670 HEKGLGI----KQDIHLAKRFYDMAAEASPD 696
>ref|NP_005056.3| (NM_005065) sel-1 suppressor of lin-12-like (C. elegans);
Suppressor of lin 12 (sel-1), C. elegans, homolog of;
sel-1 (suppressor of lin-12, C.elegans)-like [Homo
sapiens]
ref|XP_007325.4| (XM_007325) sel-1 suppressor of lin-12-like (C. elegans) [Homo
sapiens]
sp|Q9UBV2|SE1L_HUMAN Sel-1 homolog precursor (Suppressor of lin-12-like protein)
(Sel-1L)
dbj|BAA87904.1| (AB020335) Pancreas-specific gene [Homo sapiens]
dbj|BAA89204.1| (AB024763) TSA305 [Homo sapiens]
Length = 794
Score = 94.0 bits (232), Expect = 2e-18
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 57 DLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY-YSGQGVSQ 115
D EN G N G+L E++L + F A+ D+ G LG L+ + G+GV Q
Sbjct: 344 DEVENPG-MNSGML-------EEDLIQYYQFLAEKGDVQAQVG---LGQLHLHGGRGVEQ 392
Query: 116 NTNKALQYYSKACDLKYAEGCASLGGIYHDGK-VVTRDFKKAVEYFTKACDLNDGDGCTI 174
N +A Y++ A + + A LG +Y +G +V + + A+ YF KA D+ + G +
Sbjct: 393 NHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSG 452
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
LG Y GRG + AL + KA + G G+MY++G G +++K+AL ++
Sbjct: 453 LGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNL 512
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
A + + +NL M +G GV R+ A+E FK C+ G
Sbjct: 513 ASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 553
Score = 75.9 bits (185), Expect = 5e-13
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 41/271 (15%)
Query: 48 AKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 107
A YF+KA D+ G LG+ Y G+GV+ N A ++ KA + + +G LG++Y
Sbjct: 434 ALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMY 493
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACD-- 165
Y+G GV ++ +AL+Y++ A + +L ++ G V R AVE F C+
Sbjct: 494 YNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 553
Query: 166 ------------LNDGD----------------------GCTILGSLYDAGRGTPKDLKK 191
DGD IL + G + +
Sbjct: 554 RWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQREASIVGENETYPR 613
Query: 192 ALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGG-GCFNLGAM 250
AL +++A + G+ + +G G +++ A Y A E ++ FNLG M
Sbjct: 614 ALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYM 673
Query: 251 QYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
G G+ KQ I K+ + A+ + D
Sbjct: 674 HEKGLGI----KQDIHLAKRFYDMAAEASPD 700
Score = 55.1 bits (131), Expect = 9e-07
Identities = 69/301 (22%), Positives = 108/301 (34%), Gaps = 52/301 (17%)
Query: 23 LMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLK 82
+M + K L G KS K +A +Y +KA + + G + +N++
Sbjct: 185 MMYQTGMKILNGSNKKSQKR----EAYRYLQKAASMNHTKALERVSYALLFGDYLPQNIQ 240
Query: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYS-----------KACDLK 131
A + K + G LG LY SG GV+ + KAL YY+ +
Sbjct: 241 AAREMFEKLTEEGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYR 300
Query: 132 YAEGCASL----GGIYH---------------DGKVVTRD----------------FKKA 156
Y G L + H G VV R +
Sbjct: 301 YWAGIGVLQSCESALTHYRLVANHVASDISLTGGSVVQRIRLPDEVENPGMNSGMLEEDL 360
Query: 157 VEYFTKACDLNDGDGCTILGSLY-DAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMY 215
++Y+ + D LG L+ GRG ++ ++A ++ A + +S G MY
Sbjct: 361 IQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMY 420
Query: 216 HHGEGATKNFKE-ALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL 274
G E AL + KA ++ N G LG G GV N A++ F+K +
Sbjct: 421 SEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQ 480
Query: 275 G 275
G
Sbjct: 481 G 481
Score = 47.8 bits (112), Expect = 1e-04
Identities = 50/260 (19%), Positives = 97/260 (37%), Gaps = 11/260 (4%)
Query: 38 KSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYS 97
K+ ++ F + ++ K ++E + G+ G + ++A + KA +N++
Sbjct: 160 KADEKWGFCETEEEAAKRRQMQEAEMMYQTGMKILNGSNKKSQKREAYRYLQKAASMNHT 219
Query: 98 NGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAV 157
+ G + QN A + + K + +G +LG +Y G V KA+
Sbjct: 220 KALERVSYALLFGDYLPQNIQAAREMFEKLTEEGSPKGQTALGFLYASGLGVNSSQAKAL 279
Query: 158 EYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHH 217
Y+T + +LG Y AG G + + AL Y + S G++
Sbjct: 280 VYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLVANHVASDISLTGGSVVQR 339
Query: 218 ----------GEGATKNFKEALARYSKACELENGGGCFNLGAMQ-YNGEGVTRNEKQAIE 266
G + ++ + Y E + LG + + G GV +N ++A +
Sbjct: 340 IRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFD 399
Query: 267 NFKKGCKLGAKGACDILKQL 286
F G A L ++
Sbjct: 400 YFNLAANAGNSHAMAFLGKM 419
Score = 42.4 bits (98), Expect = 0.006
Identities = 50/210 (23%), Positives = 81/210 (37%), Gaps = 15/210 (7%)
Query: 34 GLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACD 93
G+G K +D+ QA KYF A +NL ++ G GV ++ A + C+
Sbjct: 496 GIGVK----RDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 551
Query: 94 L-NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKY--AEGCASLGGIYHDGKVV- 149
+S N Y G + N A+ Y + Y A+ A+ + +V
Sbjct: 552 RGRWSERLMTAYNSYKDG-----DYNAAVIQYLLLAEQGYEVAQSNAAFILDQREASIVG 606
Query: 150 -TRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS-PG 207
+ +A+ ++ +A LG + G GT D + A Y A + + S
Sbjct: 607 ENETYPRALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQA 666
Query: 208 CFNAGNMYHHGEGATKNFKEALARYSKACE 237
FN G M+ G G ++ A Y A E
Sbjct: 667 MFNLGYMHEKGLGIKQDIHLAKRFYDMAAE 696
>gb|AAF29413.1|AF052059_1 (AF052059) SEL1L [Homo sapiens]
gb|AAL40905.1| (AF198647) sel-1 [Homo sapiens]
Length = 794
Score = 94.0 bits (232), Expect = 2e-18
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 57 DLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY-YSGQGVSQ 115
D EN G N G+L E++L + F A+ D+ G LG L+ + G+GV Q
Sbjct: 344 DEVENPG-MNSGML-------EEDLIQYYQFLAEKGDVQAQVG---LGQLHLHGGRGVEQ 392
Query: 116 NTNKALQYYSKACDLKYAEGCASLGGIYHDGK-VVTRDFKKAVEYFTKACDLNDGDGCTI 174
N +A Y++ A + + A LG +Y +G +V + + A+ YF KA D+ + G +
Sbjct: 393 NHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSG 452
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
LG Y GRG + AL + KA + G G+MY++G G +++K+AL ++
Sbjct: 453 LGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNL 512
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
A + + +NL M +G GV R+ A+E FK C+ G
Sbjct: 513 ASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 553
Score = 75.9 bits (185), Expect = 5e-13
Identities = 67/271 (24%), Positives = 111/271 (40%), Gaps = 41/271 (15%)
Query: 48 AKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 107
A YF+KA D+ G LG+ Y G+GV+ N A ++ KA + + +G LG++Y
Sbjct: 434 ALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMY 493
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACD-- 165
Y+G GV ++ +AL+Y++ A + +L ++ G V R AVE F C+
Sbjct: 494 YNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 553
Query: 166 ------------LNDGD----------------------GCTILGSLYDAGRGTPKDLKK 191
DGD IL + G + +
Sbjct: 554 RWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGYEVAQSNAAFILDQREASIVGENETYPR 613
Query: 192 ALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGG-GCFNLGAM 250
AL +++A + G+ + +G G +++ A Y A E ++ FNLG M
Sbjct: 614 ALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYM 673
Query: 251 QYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
G G+ KQ I K+ + A+ + D
Sbjct: 674 HEKGLGI----KQDIHLAKRFYDMAAEASPD 700
Score = 47.8 bits (112), Expect = 1e-04
Identities = 50/260 (19%), Positives = 97/260 (37%), Gaps = 11/260 (4%)
Query: 38 KSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYS 97
K+ ++ F + ++ K ++E + G+ G + ++A + KA +N++
Sbjct: 160 KADEKWGFCETEEEAAKRRQMQEAEMVYQTGMKILNGSNKKSQKREAYRYLQKAASMNHT 219
Query: 98 NGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAV 157
+ G + QN A + + K + +G +LG +Y G V KA+
Sbjct: 220 KALERVSYALLFGDYLPQNIQAAREMFEKLTEEGSPKGQTALGFLYASGLGVNSSQAKAL 279
Query: 158 EYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHH 217
Y+T + +LG Y AG G + + AL Y + S G++
Sbjct: 280 VYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHYRLVANHVASDISLTGGSVVQR 339
Query: 218 ----------GEGATKNFKEALARYSKACELENGGGCFNLGAMQ-YNGEGVTRNEKQAIE 266
G + ++ + Y E + LG + + G GV +N ++A +
Sbjct: 340 IRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFD 399
Query: 267 NFKKGCKLGAKGACDILKQL 286
F G A L ++
Sbjct: 400 YFNLAANAGNSHAMAFLGKM 419
Score = 42.4 bits (98), Expect = 0.006
Identities = 50/210 (23%), Positives = 81/210 (37%), Gaps = 15/210 (7%)
Query: 34 GLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACD 93
G+G K +D+ QA KYF A +NL ++ G GV ++ A + C+
Sbjct: 496 GIGVK----RDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 551
Query: 94 L-NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKY--AEGCASLGGIYHDGKVV- 149
+S N Y G + N A+ Y + Y A+ A+ + +V
Sbjct: 552 RGRWSERLMTAYNSYKDG-----DYNAAVIQYLLLAEQGYEVAQSNAAFILDQREASIVG 606
Query: 150 -TRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS-PG 207
+ +A+ ++ +A LG + G GT D + A Y A + + S
Sbjct: 607 ENETYPRALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQA 666
Query: 208 CFNAGNMYHHGEGATKNFKEALARYSKACE 237
FN G M+ G G ++ A Y A E
Sbjct: 667 MFNLGYMHEKGLGIKQDIHLAKRFYDMAAE 696
>dbj|BAB12403.1| (AB048195) SEL1L [Mesocricetus auratus]
Length = 794
Score = 93.6 bits (231), Expect = 2e-18
Identities = 70/221 (31%), Positives = 112/221 (50%), Gaps = 13/221 (5%)
Query: 57 DLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY-YSGQGVSQ 115
D EN G N G+L E++L + F A+ D+ G LG L+ + G+GV Q
Sbjct: 344 DEVENPG-MNSGML-------EEDLIQYYQFLAEKGDVQAQVG---LGQLHLHGGRGVEQ 392
Query: 116 NTNKALQYYSKACDLKYAEGCASLGGIYHDGK-VVTRDFKKAVEYFTKACDLNDGDGCTI 174
N +A Y++ A + + A LG +Y +G +V + + A+ YF KA D+ + G +
Sbjct: 393 NHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSG 452
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
LG Y GRG + AL + KA + G G+MY++G G +++K+AL ++
Sbjct: 453 LGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNL 512
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
A + + +NL M +G GV R+ A+E FK C+ G
Sbjct: 513 ASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 553
Score = 75.1 bits (183), Expect = 8e-13
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 41/271 (15%)
Query: 48 AKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 107
A YF+KA D+ G LG+ Y G+G++ N A ++ KA + + +G LG++Y
Sbjct: 434 ALHYFKKAADMGNPVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMY 493
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACD-- 165
Y+G GV ++ +AL+Y++ A + +L ++ G V R AVE F C+
Sbjct: 494 YNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 553
Query: 166 ------------LNDGD----------------------GCTILGSLYDAGRGTPKDLKK 191
DGD IL G + +
Sbjct: 554 RWSERLMTAYNSYKDGDYNAAVVQYLLLAEQGYEVAQSNAAFILDQREATIVGENETYPR 613
Query: 192 ALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGG-GCFNLGAM 250
AL +++A + G+ + +G G +++ A Y A E ++ FNLG M
Sbjct: 614 ALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYM 673
Query: 251 QYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
G G+ KQ I K+ + A+ + D
Sbjct: 674 HEKGLGI----KQDIHLAKRFYDMAAEASPD 700
Score = 45.4 bits (106), Expect = 7e-04
Identities = 49/260 (18%), Positives = 97/260 (36%), Gaps = 11/260 (4%)
Query: 38 KSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYS 97
K+ ++ F + ++ K ++E + G+ G + ++A + KA +N++
Sbjct: 160 KTDEKWGFCETEEDAAKRRQMQEAEMIYQAGMKILNGSNRKSQKREAYRYLQKAAGMNHT 219
Query: 98 NGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAV 157
+ G ++QN A + + K + +G +LG +Y G V KA+
Sbjct: 220 KALERVSYALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTALGFLYVSGLGVNSSQAKAL 279
Query: 158 EYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHH 217
Y+T + +LG Y AG G + + L Y + S G++
Sbjct: 280 VYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESVLTHYRLVANHVASDISLTGGSVVQR 339
Query: 218 ----------GEGATKNFKEALARYSKACELENGGGCFNLGAMQ-YNGEGVTRNEKQAIE 266
G + ++ + Y E + LG + + G GV +N ++A +
Sbjct: 340 IRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFD 399
Query: 267 NFKKGCKLGAKGACDILKQL 286
F G A L ++
Sbjct: 400 YFNLAANAGNSHAMAFLGKM 419
Score = 42.7 bits (99), Expect = 0.005
Identities = 51/211 (24%), Positives = 79/211 (37%), Gaps = 17/211 (8%)
Query: 34 GLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACD 93
G+G K +D+ QA KYF A +NL ++ G GV ++ A + C+
Sbjct: 496 GIGVK----RDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 551
Query: 94 L-NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVT-- 150
+S N Y G + N A+ Y + Y E S D + T
Sbjct: 552 RGRWSERLMTAYNSYKDG-----DYNAAVVQYLLLAEQGY-EVAQSNAAFILDQREATIV 605
Query: 151 ---RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS-P 206
+ +A+ ++ +A LG + G GT D + A Y A + + S
Sbjct: 606 GENETYPRALLHWNRAASQGYTVARIKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQ 665
Query: 207 GCFNAGNMYHHGEGATKNFKEALARYSKACE 237
FN G M+ G G ++ A Y A E
Sbjct: 666 AMFNLGYMHEKGLGIKQDIHLAKRFYDMAAE 696
>gb|AAD41587.1|AF057704_3 (AF057704) enhanced entry protein EnhC [Legionella pneumophila]
Length = 1201
Score = 93.2 bits (230), Expect = 3e-18
Identities = 66/245 (26%), Positives = 110/245 (43%), Gaps = 4/245 (1%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
E D+ AK +++KA + LG +Y + V+ N +A Y A G +
Sbjct: 881 EPDYNLAKHWYQKAAKHLSKADVA-LGFIY---ETVDDNYAQALKAYENAAAKGDMLGAY 936
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
L +Y G+GV N +KAL + +A + E + L G+Y G R+ ++A+ ++
Sbjct: 937 NLALMYEYGKGVPVNYSKALSLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYK 996
Query: 162 KACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGA 221
KA L +G+ LG L + G G D AL Y A D + MYH+G G
Sbjct: 997 KAASLGNGNALYALGLLSETGVGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYGLGV 1056
Query: 222 TKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
K+ K + + Y K + +N + LG G R ++ E ++ + G+ A
Sbjct: 1057 EKDHKRSASIYQKLAQKQNAYAQYQLGTYYIEGTAGERLPEKGRELLQQASENGSLQARR 1116
Query: 282 ILKQL 286
+L++L
Sbjct: 1117 VLQRL 1121
Score = 84.7 bits (208), Expect = 1e-15
Identities = 60/243 (24%), Positives = 106/243 (42%), Gaps = 4/243 (1%)
Query: 37 AKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNY 96
++S + QAK+ ++ D + L + +G G +L A +Y + +
Sbjct: 804 SQSSVPEQMNQAKEIYKGLADKGDQYAQLKLAYMLQKGLGAAPDLAGAQHWYTASAEQGN 863
Query: 97 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKA 156
+LLG Y G+ + N A +Y KA ++ +LG IY + V ++ +A
Sbjct: 864 PEAQYLLGQFYQLGETGEPDYNLAKHWYQKAAK-HLSKADVALGFIY---ETVDDNYAQA 919
Query: 157 VEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYH 216
++ + A D G L +Y+ G+G P + KAL+ + +A + MY
Sbjct: 920 LKAYENAAAKGDMLGAYNLALMYEYGKGVPVNYSKALSLFKEASEKGAPEAMSQLAGMYF 979
Query: 217 HGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGA 276
+G G +N ++AL Y KA L NG + LG + G GV + A+ ++ G
Sbjct: 980 YGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSETGVGVKLDFPDALRYYQDASDKGN 1039
Query: 277 KGA 279
+ A
Sbjct: 1040 EKA 1042
Score = 65.9 bits (159), Expect = 5e-10
Identities = 75/291 (25%), Positives = 109/291 (36%), Gaps = 50/291 (17%)
Query: 25 AEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGC-------FNLGVLYYQ-GQG 76
A Q+P LG + K Q K EK DL + S FNL VL Q G+
Sbjct: 722 AGQNPVSQFILGTYITEGKGVAQDK---EKGLDLLKQSADSQFSYADFNLAVLKQQSGED 778
Query: 77 VEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGC 136
NL ++ L S+ +L + Y S V + N+A + Y D
Sbjct: 779 FLPNL-------IESYKLGNSHAGIVLADYYLSQSSVPEQMNQAKEIYKGLADKGDQYAQ 831
Query: 137 ASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR-GTP--------- 186
L + G D A ++T + + + + +LG Y G G P
Sbjct: 832 LKLAYMLQKGLGAAPDLAGAQHWYTASAEQGNPEAQYLLGQFYQLGETGEPDYNLAKHWY 891
Query: 187 ----KDLKK------------------ALASYDKACDLKDSPGCFNAGNMYHHGEGATKN 224
K L K AL +Y+ A D G +N MY +G+G N
Sbjct: 892 QKAAKHLSKADVALGFIYETVDDNYAQALKAYENAAAKGDMLGAYNLALMYEYGKGVPVN 951
Query: 225 FKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
+ +AL+ + +A E L M + G G RNE+QA+ +KK LG
Sbjct: 952 YSKALSLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKAASLG 1002
Score = 45.1 bits (105), Expect = 0.001
Identities = 35/137 (25%), Positives = 58/137 (41%), Gaps = 1/137 (0%)
Query: 78 EKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCA 137
EKN ++AA ++ +A + + + Y G GV +NT+ A +YY A
Sbjct: 98 EKNPEEAARWFKQAAAVGDVSAQMYMAAAYLYGVGVKKNTDIARRYYIDAAKNGNPIAQY 157
Query: 138 SLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYD 197
+L + + K K + + KA + D T LG Y AG+ KD K + +
Sbjct: 158 TLAEYFLESKHAGNK-KLGIIWLNKAAENGDPKALTELGRFYVAGQMVAKDTAKGVELLN 216
Query: 198 KACDLKDSPGCFNAGNM 214
KA + +P G +
Sbjct: 217 KAASEQYTPAMLELGKL 233
Score = 42.4 bits (98), Expect = 0.006
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 1/122 (0%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
EK+ +A ++F++A + + S + Y G GV+KN A +Y A +
Sbjct: 98 EKNPEEAARWFKQAAAVGDVSAQMYMAAAYLYGVGVKKNTDIARRYYIDAAKNGNPIAQY 157
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
L Y+ + N + + +KA + + LG Y G++V +D K VE
Sbjct: 158 TLAE-YFLESKHAGNKKLGIIWLNKAAENGDPKALTELGRFYVAGQMVAKDTAKGVELLN 216
Query: 162 KA 163
KA
Sbjct: 217 KA 218
>pir||T46587 hypothetical protein [imported] - Vogesella indigofera
gb|AAD54009.1|AF088857_1 (AF088857) hypothetical protein [Vogesella indigofera]
Length = 268
Score = 92.8 bits (229), Expect = 4e-18
Identities = 61/205 (29%), Positives = 102/205 (49%)
Query: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
F LGV Y +G GV ++ KAA++Y +A + L LY +GQGV+QN +AL ++
Sbjct: 49 FRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVNQNDAEALAWF 108
Query: 125 SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 184
KA AE +LG + +G+ ++ +AV + KA L + GRG
Sbjct: 109 RKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYNLAIMMREGRG 168
Query: 185 TPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC 244
P+D A+A + K + + N G MY G G ++++ AL+ K ++
Sbjct: 169 LPQDDAAAVALFRKVAEQGVAIAQSNLGLMYKLGRGVAQDYQLALSWLRKGVAQKSAMAQ 228
Query: 245 FNLGAMQYNGEGVTRNEKQAIENFK 269
NLG + G+GV +++ +A+ F+
Sbjct: 229 ANLGVLYLEGKGVAQDDNEAVVWFR 253
Score = 75.9 bits (185), Expect = 5e-13
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 2/203 (0%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+DF +A ++ +A NL VLY GQGV +N +A +++ KA +
Sbjct: 63 QDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVNQNDAEALAWFRKAATQGQAEAQLN 122
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
LG + +GQG +N ++A+ + KA +L + +G+ + +D AV F K
Sbjct: 123 LGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYNLAIMMREGRGLPQDDAAAVALFRK 182
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
+ + LG +Y GRG +D + AL+ K K + N G +Y G+G
Sbjct: 183 VAEQGVAIAQSNLGLMYKLGRGVAQDYQLALSWLRKGVAQKSAMAQANLGVLYLEGKGVA 242
Query: 223 KNFKEALA--RYSKACELENGGG 243
++ EA+ R + L G G
Sbjct: 243 QDDNEAVVWFRLAAGARLPAGAG 265
Score = 66.6 bits (161), Expect = 3e-10
Identities = 50/181 (27%), Positives = 81/181 (44%)
Query: 91 ACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVT 150
A + +N LG Y G GV Q+ KA +Y +A E +L +Y +G+ V
Sbjct: 39 AAEQGDANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVN 98
Query: 151 RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFN 210
++ +A+ +F KA + LG++ G+GTPK+ +A+ KA +N
Sbjct: 99 QNDAEALAWFRKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYN 158
Query: 211 AGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 270
M G G ++ A+A + K E NLG M G GV ++ + A+ +K
Sbjct: 159 LAIMMREGRGLPQDDAAAVALFRKVAEQGVAIAQSNLGLMYKLGRGVAQDYQLALSWLRK 218
Query: 271 G 271
G
Sbjct: 219 G 219
Score = 57.4 bits (137), Expect = 2e-07
Identities = 40/137 (29%), Positives = 62/137 (45%)
Query: 139 LGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDK 198
LG Y G V +DF KA ++ +A + L LY G+G ++ +ALA + K
Sbjct: 51 LGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVNQNDAEALAWFRK 110
Query: 199 ACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVT 258
A + N G M +G+G KN EA+ KA +NL M G G+
Sbjct: 111 AATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYNLAIMMREGRGLP 170
Query: 259 RNEKQAIENFKKGCKLG 275
+++ A+ F+K + G
Sbjct: 171 QDDAAAVALFRKVAEQG 187
>ref|NP_415177.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
pir||B64799 hypothetical protein b0644 - Escherichia coli
gb|AAB40845.1| (U82598) hypothetical protein [Escherichia coli]
gb|AAC73745.1| (AE000169) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35291.1| (D90704) Sel-1 protein [Escherichia coli]
Length = 327
Score = 92.0 bits (227), Expect = 7e-18
Identities = 54/191 (28%), Positives = 95/191 (49%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
++ +A +++ A + + NLG +Y G GV K+ A +Y +A +S+ + L
Sbjct: 117 NYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNL 176
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
+LY G+GV+QN A +Y K+ + Y+ G+ V +D+K+A+ ++ KA
Sbjct: 177 ADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKA 236
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATK 223
+G +Y G+G KD + A + KA + D+ +N MYH+GEG
Sbjct: 237 AAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPV 296
Query: 224 NFKEALARYSK 234
+ ++AL Y K
Sbjct: 297 DLRQALDLYRK 307
Score = 91.3 bits (225), Expect = 1e-17
Identities = 65/247 (26%), Positives = 119/247 (47%), Gaps = 5/247 (2%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGC 100
+ KD QA + +KA LG +G+ N K+A +Y A + S
Sbjct: 80 RHKDNEQAIFWLKKAALQGHTFASNALGWTLDRGEA--PNYKEAVVWYQIAAESGMSYAQ 137
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
+ LG +Y +G GV+++ A +Y +A +++ +L +Y DGK V ++ A ++
Sbjct: 138 NNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWY 197
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEG 220
K+ + + Y+AG G +D K+A+ Y KA N G MY HG+G
Sbjct: 198 LKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQG 257
Query: 221 ATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGAC 280
K+++ A ++KA E + +NL M + GEG + +QA++ ++ K+ + G
Sbjct: 258 VEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYR---KVQSSGTR 314
Query: 281 DILKQLK 287
D+ ++++
Sbjct: 315 DVSQEIR 321
Score = 73.6 bits (179), Expect = 2e-12
Identities = 52/209 (24%), Positives = 99/209 (46%), Gaps = 2/209 (0%)
Query: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
++LG Y + + K+ ++A + KA ++ + LG + +G + N +A+ +Y
Sbjct: 68 YSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG--WTLDRGEAPNYKEAVVWY 125
Query: 125 SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 184
A + + +LG +Y +G V +D+ A ++ +A D L LY+ G+G
Sbjct: 126 QIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKG 185
Query: 185 TPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC 244
++ A Y K+ + F Y+ GEG +++K+A+ Y KA + G
Sbjct: 186 VAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAY 245
Query: 245 FNLGAMQYNGEGVTRNEKQAIENFKKGCK 273
N+G M +G+GV ++ + A E F K +
Sbjct: 246 VNIGYMYKHGQGVEKDYQAAFEWFTKAAE 274
>sp|P77234|YBEQ_ECOLI Hypothetical protein ybeQ
Length = 325
Score = 92.0 bits (227), Expect = 7e-18
Identities = 54/191 (28%), Positives = 95/191 (49%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
++ +A +++ A + + NLG +Y G GV K+ A +Y +A +S+ + L
Sbjct: 115 NYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNL 174
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
+LY G+GV+QN A +Y K+ + Y+ G+ V +D+K+A+ ++ KA
Sbjct: 175 ADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKA 234
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATK 223
+G +Y G+G KD + A + KA + D+ +N MYH+GEG
Sbjct: 235 AAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPV 294
Query: 224 NFKEALARYSK 234
+ ++AL Y K
Sbjct: 295 DLRQALDLYRK 305
Score = 91.3 bits (225), Expect = 1e-17
Identities = 65/247 (26%), Positives = 119/247 (47%), Gaps = 5/247 (2%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGC 100
+ KD QA + +KA LG +G+ N K+A +Y A + S
Sbjct: 78 RHKDNEQAIFWLKKAALQGHTFASNALGWTLDRGEA--PNYKEAVVWYQIAAESGMSYAQ 135
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
+ LG +Y +G GV+++ A +Y +A +++ +L +Y DGK V ++ A ++
Sbjct: 136 NNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWY 195
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEG 220
K+ + + Y+AG G +D K+A+ Y KA N G MY HG+G
Sbjct: 196 LKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQG 255
Query: 221 ATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGAC 280
K+++ A ++KA E + +NL M + GEG + +QA++ ++ K+ + G
Sbjct: 256 VEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYR---KVQSSGTR 312
Query: 281 DILKQLK 287
D+ ++++
Sbjct: 313 DVSQEIR 319
Score = 73.6 bits (179), Expect = 2e-12
Identities = 52/209 (24%), Positives = 99/209 (46%), Gaps = 2/209 (0%)
Query: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
++LG Y + + K+ ++A + KA ++ + LG + +G + N +A+ +Y
Sbjct: 66 YSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG--WTLDRGEAPNYKEAVVWY 123
Query: 125 SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 184
A + + +LG +Y +G V +D+ A ++ +A D L LY+ G+G
Sbjct: 124 QIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKG 183
Query: 185 TPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC 244
++ A Y K+ + F Y+ GEG +++K+A+ Y KA + G
Sbjct: 184 VAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAY 243
Query: 245 FNLGAMQYNGEGVTRNEKQAIENFKKGCK 273
N+G M +G+GV ++ + A E F K +
Sbjct: 244 VNIGYMYKHGQGVEKDYQAAFEWFTKAAE 272
>ref|NP_207422.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||D64598 hypothetical protein HP0628 - Helicobacter pylori (strain 26695)
gb|AAD07699.1| (AE000577) H. pylori predicted coding region HP0628 [Helicobacter
pylori 26695]
Length = 225
Score = 90.9 bits (224), Expect = 1e-17
Identities = 65/203 (32%), Positives = 91/203 (44%), Gaps = 11/203 (5%)
Query: 38 KSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYS 97
K+ D A + + AC + C NLG ++ G GV K+ KA S+Y +C+
Sbjct: 22 KNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVPKDYYKAISYYKFSCENGND 81
Query: 98 NGCHLLG------NLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKV-VT 150
GC+ LG N+Y G +Q + L Y AC+ GCA+LG IY +G +
Sbjct: 82 MGCYNLGLMSNVNNIY--GIDKAQLSQVDLNYL--ACNAGDMMGCANLGWIYANGDLGAP 137
Query: 151 RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFN 210
+ A +YF ACD C LG LY G G P+D ++AL + ACD C N
Sbjct: 138 LNNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGVPQDDQRALDLFSYACDNGFESSCRN 197
Query: 211 AGNMYHHGEGATKNFKEALARYS 233
GN H N+ Y+
Sbjct: 198 YGNFKEHLLRVNPNYGRLFMPYN 220
Score = 85.5 bits (210), Expect = 6e-16
Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 6/194 (3%)
Query: 92 CDLNYSNGCHLLGNLYYSGQGVSQNTNK-ALQYYSKACDLKYAEGCASLGGIYHDGKVVT 150
C + C L +Y + + N + ALQ Y+ AC C +LG ++ +G V
Sbjct: 3 CSGGDATACANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVP 62
Query: 151 RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDK---ACDLKDSPG 207
+D+ KA+ Y+ +C+ + GC LG + + D K L+ D AC+ D G
Sbjct: 63 KDYYKAISYYKFSCENGNDMGCYNLGLMSNVNNIYGID-KAQLSQVDLNYLACNAGDMMG 121
Query: 208 CFNAGNMYHHGE-GATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIE 266
C N G +Y +G+ GA N A + AC+ G C NLG + G GV +++++A++
Sbjct: 122 CANLGWIYANGDLGAPLNNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGVPQDDQRALD 181
Query: 267 NFKKGCKLGAKGAC 280
F C G + +C
Sbjct: 182 LFSYACDNGFESSC 195
Score = 79.7 bits (195), Expect = 3e-14
Identities = 58/197 (29%), Positives = 89/197 (44%), Gaps = 4/197 (2%)
Query: 56 CDLKENSGCFNLGVLYYQGQGVEKNLKK-AASFYAKACDLNYSNGCHLLGNLYYSGQGVS 114
C + + C NL +Y + + N K+ A YA AC C+ LG ++ +G GV
Sbjct: 3 CSGGDATACANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVP 62
Query: 115 QNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKA--VEYFTKACDLNDGDGC 172
++ KA+ YY +C+ GC +LG + + + D + V+ AC+ D GC
Sbjct: 63 KDYYKAISYYKFSCENGNDMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGC 122
Query: 173 TILGSLYDAGR-GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALAR 231
LG +Y G G P + A + ACD C N G +Y G G ++ + AL
Sbjct: 123 ANLGWIYANGDLGAPLNNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGVPQDDQRALDL 182
Query: 232 YSKACELENGGGCFNLG 248
+S AC+ C N G
Sbjct: 183 FSYACDNGFESSCRNYG 199
>ref|NP_286370.1| (NC_002655) ybeQ gene product [Escherichia coli O157:H7 EDL933]
ref|NP_308709.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG54978.1|AE005243_7 (AE005243) ybeQ gene product [Escherichia coli O157:H7 EDL933]
dbj|BAB34105.1| (AP002552) hypothetical protein [Escherichia coli O157:H7]
Length = 195
Score = 88.2 bits (217), Expect = 1e-16
Identities = 50/169 (29%), Positives = 84/169 (49%)
Query: 66 NLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYS 125
NLG +Y G G ++ A +Y +A +S+ + L +LY G+GV+QN A +Y
Sbjct: 7 NLGWMYRNGNGAAQDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYL 66
Query: 126 KACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGT 185
K+ + Y+ G+ V +D+K+A+ ++ KA +G +Y G+G
Sbjct: 67 KSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGV 126
Query: 186 PKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
KD + A + KA + D+ +N MYH+GEG + ++AL Y K
Sbjct: 127 EKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRK 175
Score = 83.6 bits (205), Expect = 2e-15
Identities = 50/185 (27%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
LG +Y +G G +Q+ A +Y +A +++ +L +Y DGK V ++ A ++ K
Sbjct: 8 LGWMYRNGNGAAQDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLK 67
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
+ + + Y+AG G +D K+A+ Y KA N G MY HG+G
Sbjct: 68 SAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVE 127
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDI 282
K+++ A ++KA E + +NL M + GEG + +QA++ ++ K+ + G D+
Sbjct: 128 KDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYR---KVQSSGTRDV 184
Query: 283 LKQLK 287
++++
Sbjct: 185 SQEIR 189
Score = 81.3 bits (199), Expect = 1e-14
Identities = 49/156 (31%), Positives = 80/156 (50%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+D+T A ++++A + NL LY G+GV +N AA +Y K+ +
Sbjct: 20 QDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQ 79
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
+ Y +G+GV Q+ +A+ +Y KA ++G +Y G+ V +D++ A E+FTK
Sbjct: 80 IAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTK 139
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDK 198
A + ND L +Y G G P DL++AL Y K
Sbjct: 140 AAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRK 175
Score = 60.8 bits (146), Expect = 2e-08
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 2/144 (1%)
Query: 130 LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDL 189
+ YA+ +LG +Y +G +D+ A ++ +A D L LY+ G+G ++
Sbjct: 1 MSYAQN--NLGWMYRNGNGAAQDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNE 58
Query: 190 KKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGA 249
A Y K+ + F Y+ GEG +++K+A+ Y KA + G N+G
Sbjct: 59 TLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGY 118
Query: 250 MQYNGEGVTRNEKQAIENFKKGCK 273
M +G+GV ++ + A E F K +
Sbjct: 119 MYKHGQGVEKDYQAAFEWFTKAAE 142
Score = 51.2 bits (121), Expect = 1e-05
Identities = 26/85 (30%), Positives = 45/85 (52%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
++D+ QA ++ KA N+G +Y GQGVEK+ + A ++ KA + N + +
Sbjct: 91 DQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWY 150
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSK 126
L +Y+ G+G + +AL Y K
Sbjct: 151 NLAIMYHYGEGRPVDLRQALDLYRK 175
>gb|AAF01236.1|AF185288_1 (AF185288) immunoreactive protein [Coxiella burnetii]
Length = 469
Score = 87.4 bits (215), Expect = 2e-16
Identities = 59/230 (25%), Positives = 102/230 (43%), Gaps = 3/230 (1%)
Query: 47 QAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL 106
+A +++ + ++ + LG + G K+ KA +Y K+ + +LLGN+
Sbjct: 215 KAVAIYQELANKQDPAAELKLGFMNEHGLLFPKDYHKAEEWYQKSAEQGNPIAQYLLGNM 274
Query: 107 YYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 166
YY G+GV ++ NKA+ + K+ Y LG IY K ++ +A +++T A
Sbjct: 275 YYLGRGVDRDVNKAIDWLKKSAAQNYVPAKVGLGFIYEMSK---HNYPEAKKWYTLASKF 331
Query: 167 NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFK 226
++ LG +Y+ G+G D +KA Y A MY G G +
Sbjct: 332 HNPQALYNLGLMYEYGKGVKSDPQKAFRLYKDAAQNGLDLAAVQVAGMYLKGTGIGFDPN 391
Query: 227 EALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGA 276
AL YS+A + N + LG M +G + +A ++K K G+
Sbjct: 392 TALKMYSQAAQKNNSFATYQLGLMSESGVAQKIDLNKARLYYEKAAKEGS 441
Score = 67.8 bits (164), Expect = 1e-10
Identities = 56/229 (24%), Positives = 99/229 (42%), Gaps = 17/229 (7%)
Query: 53 EKACDLKENSGCFNLGVLYYQ------GQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL 106
EK+ + +NL +L Q G+ L +AA+ Y K ++ L +
Sbjct: 151 EKSANQGNGYAKYNLAILAKQNKYTKPGENFLSLLIRAANHYDKIKEI--------LADY 202
Query: 107 YYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 166
Y V + KA+ Y + + + LG + G + +D+ KA E++ K+ +
Sbjct: 203 YLLDTPVPGSEKKAVAIYQELANKQDPAAELKLGFMNEHGLLFPKDYHKAEEWYQKSAEQ 262
Query: 167 NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFK 226
+ +LG++Y GRG +D+ KA+ K+ P G +Y E + N+
Sbjct: 263 GNPIAQYLLGNMYYLGRGVDRDVNKAIDWLKKSAAQNYVPAKVGLGFIY---EMSKHNYP 319
Query: 227 EALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
EA Y+ A + N +NLG M G+GV + ++A +K + G
Sbjct: 320 EAKKWYTLASKFHNPQALYNLGLMYEYGKGVKSDPQKAFRLYKDAAQNG 368
Score = 67.4 bits (163), Expect = 2e-10
Identities = 55/219 (25%), Positives = 95/219 (43%), Gaps = 7/219 (3%)
Query: 23 LMAEQDPKELVGLGAKSYK----EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVE 78
L +QDP + LG + KD+ +A+++++K+ + + LG +YY G+GV+
Sbjct: 223 LANKQDPAAELKLGFMNEHGLLFPKDYHKAEEWYQKSAEQGNPIAQYLLGNMYYLGRGVD 282
Query: 79 KNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCAS 138
+++ KA + K+ NY LG +Y + N +A ++Y+ A + +
Sbjct: 283 RDVNKAIDWLKKSAAQNYVPAKVGLGFIYEMSK---HNYPEAKKWYTLASKFHNPQALYN 339
Query: 139 LGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDK 198
LG +Y GK V D +KA + A + +Y G G D AL Y +
Sbjct: 340 LGLMYEYGKGVKSDPQKAFRLYKDAAQNGLDLAAVQVAGMYLKGTGIGFDPNTALKMYSQ 399
Query: 199 ACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE 237
A +S + G M G + +A Y KA +
Sbjct: 400 AAQKNNSFATYQLGLMSESGVAQKIDLNKARLYYEKAAK 438
Score = 67.0 bits (162), Expect = 2e-10
Identities = 65/241 (26%), Positives = 100/241 (40%), Gaps = 8/241 (3%)
Query: 33 VGLGAKSYKEKDFTQAKKYFE---KACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYA 89
V LG ++ T A+K FE KA + L +LY +G GV +N +K+A
Sbjct: 59 VALGYFYLQQNQTTLAEKTFEIAQKAYQTNDPEAAMLLAILYDRGFGVNRNSRKSAEILE 118
Query: 90 KACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVV 149
K N + +LGN Y + + N A+ K+ + +L + K
Sbjct: 119 KLSKQNNAIAQFMLGNYYLKNK---RKENIAISLLEKSANQGNGYAKYNLAILAKQNKY- 174
Query: 150 TRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCF 209
T+ + + +A + D IL Y P KKA+A Y + + +D
Sbjct: 175 TKPGENFLSLLIRAANHYDKIK-EILADYYLLDTPVPGSEKKAVAIYQELANKQDPAAEL 233
Query: 210 NAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFK 269
G M HG K++ +A Y K+ E N + LG M Y G GV R+ +AI+ K
Sbjct: 234 KLGFMNEHGLLFPKDYHKAEEWYQKSAEQGNPIAQYLLGNMYYLGRGVDRDVNKAIDWLK 293
Query: 270 K 270
K
Sbjct: 294 K 294
Score = 58.9 bits (141), Expect = 6e-08
Identities = 39/149 (26%), Positives = 63/149 (42%), Gaps = 1/149 (0%)
Query: 33 VGLG-AKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKA 91
VGLG + ++ +AKK++ A +NLG++Y G+GV+ + +KA Y A
Sbjct: 305 VGLGFIYEMSKHNYPEAKKWYTLASKFHNPQALYNLGLMYEYGKGVKSDPQKAFRLYKDA 364
Query: 92 CDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTR 151
+ +Y G G+ + N AL+ YS+A + LG + G
Sbjct: 365 AQNGLDLAAVQVAGMYLKGTGIGFDPNTALKMYSQAAQKNNSFATYQLGLMSESGVAQKI 424
Query: 152 DFKKAVEYFTKACDLNDGDGCTILGSLYD 180
D KA Y+ KA + L Y+
Sbjct: 425 DLNKARLYYEKAAKEGSVEAQLALARFYE 453
>ref|NP_455743.1| (NC_003198) putative secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD08375.1| (AL627269) putative secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 509
Score = 85.9 bits (211), Expect = 5e-16
Identities = 68/255 (26%), Positives = 110/255 (42%), Gaps = 13/255 (5%)
Query: 40 YKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNG 99
Y + D+ A K+ EKA + F LG Y G+ + +KA +Y KA +L S+
Sbjct: 66 YVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSST 125
Query: 100 CHLLGNLYYSGQGVSQNTNKALQYYSKACD------LKYAEGCAS-----LGGIYHDGKV 148
+LG+ Y G G QNT AL++Y KA + +G AS LG +Y G+
Sbjct: 126 QEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQG 185
Query: 149 VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGC 208
V +D+++ KA + LG Y G G P+D ++A+ ++ +PG
Sbjct: 186 VPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGH 245
Query: 209 FNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENF 268
+Y A + + Y K + FN G YNG + ++ A+E +
Sbjct: 246 IPLNALYDKAHPADQVHSQTW--YRKTAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWY 303
Query: 269 KKGCKLGAKGACDIL 283
++ G A D +
Sbjct: 304 RRAAAQGLAEAQDAI 318
Score = 77.4 bits (189), Expect = 2e-13
Identities = 51/172 (29%), Positives = 81/172 (46%), Gaps = 1/172 (0%)
Query: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
FN GV YY G + K+ A +Y +A + +G ++ G+ VSQ+ +AL +Y
Sbjct: 280 FNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWY 339
Query: 125 SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 184
KA LG + G+ V + ++A+ ++ KA + LG Y GRG
Sbjct: 340 RKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRG 399
Query: 185 TPKDLKKALASYDKACDLKDSPGCFNAGNMYHHG-EGATKNFKEALARYSKA 235
P++ + AL Y KA + +P G +Y HG +G K+ K+A Y A
Sbjct: 400 VPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWYYMA 451
Score = 76.6 bits (187), Expect = 3e-13
Identities = 58/249 (23%), Positives = 103/249 (41%), Gaps = 34/249 (13%)
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
+S F LGV+Y GQGV ++ ++ A KA + Y LG Y+ G+GV Q+ +A
Sbjct: 170 SSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQA 229
Query: 121 LQYYSKACDLKYAEGCASLGGIY----------------------------------HDG 146
+ + ++ Y G L +Y ++G
Sbjct: 230 VYWLNEGIPGSYTPGHIPLNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNG 289
Query: 147 KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSP 206
+ +D A+E++ +A + +G ++ G +D ++ALA Y KA
Sbjct: 290 YHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPA 349
Query: 207 GCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIE 266
+ G M G G ++ ++A+A Y KA + + + LG G GV N + A++
Sbjct: 350 AQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALK 409
Query: 267 NFKKGCKLG 275
+ K + G
Sbjct: 410 WYLKAAEQG 418
Score = 74.7 bits (182), Expect = 1e-12
Identities = 63/258 (24%), Positives = 111/258 (42%), Gaps = 37/258 (14%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+D+ Q KA + LGV Y+ G+GV ++ ++A + + +Y+ G H+
Sbjct: 188 QDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPG-HI 246
Query: 103 -----------------------------------LGNLYYSGQGVSQNTNKALQYYSKA 127
G YY+G + ++ N AL++Y +A
Sbjct: 247 PLNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRA 306
Query: 128 CDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPK 187
AE ++G ++ G+ V++D+++A+ ++ KA T LG + GRG +
Sbjct: 307 AAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQ 366
Query: 188 DLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNL 247
++A+A Y KA + + G Y G G +N + AL Y KA E L
Sbjct: 367 SDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQGFTPAQLAL 426
Query: 248 GAMQYNG-EGVTRNEKQA 264
G + +G +GV ++ KQA
Sbjct: 427 GEIYAHGRQGVPKDNKQA 444
Score = 67.0 bits (162), Expect = 2e-10
Identities = 47/147 (31%), Positives = 68/147 (45%), Gaps = 11/147 (7%)
Query: 138 SLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYD 197
SLG Y +G+ V D+K A+++ KA ILG Y+ G P +KAL Y
Sbjct: 56 SLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYR 115
Query: 198 KACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC-----------FN 246
KA +L DS G+ Y +G+G +N + AL Y KA N G F
Sbjct: 116 KAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFK 175
Query: 247 LGAMQYNGEGVTRNEKQAIENFKKGCK 273
LG M +G+GV ++ +Q +K +
Sbjct: 176 LGVMYAHGQGVPQDYQQTAILMRKAAE 202
>gb|AAH15313.1|AAH15313 (BC015313) hypothetical protein FLJ12439 [Homo sapiens]
Length = 231
Score = 85.9 bits (211), Expect = 5e-16
Identities = 63/189 (33%), Positives = 97/189 (50%), Gaps = 12/189 (6%)
Query: 59 KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-YSNGCHLLGNLYYSGQG-VSQN 116
K+ GC+ L V Y +G + KN +AA C+ N +S+ C+ LG Y +G+G ++Q+
Sbjct: 32 KDPDGCYRL-VDYLEG--IRKNFDEAAKVLKFNCEENQHSDSCYKLGAYYVTGKGGLTQD 88
Query: 117 TNKALQYYSKACDL---KYAEGCASLGGIYHDGKVVTR---DFKKAVEYFTKACDLNDGD 170
A + + AC+ K C ++G + HDG+V D KA +Y+T+ACD
Sbjct: 89 LKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRACDGGYTS 148
Query: 171 GCTILGSLYDAGR-GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEAL 229
C L +++ G G PKD+ A KACDL C NA MY G+G K+ +A
Sbjct: 149 SCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRMYKLGDGVDKDEAKAE 208
Query: 230 ARYSKACEL 238
++A +L
Sbjct: 209 VLKNRAQQL 217
Score = 55.8 bits (133), Expect = 5e-07
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQG-QGVEKNLKKAASFYAKACDLNYSNGC 100
+ D +A+ Y+ +ACD S CFNL ++ QG G K++ A + KACDL + C
Sbjct: 128 QPDLGKARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWAC 187
Query: 101 HLLGNLYYSGQGVSQNTNKA 120
+Y G GV ++ KA
Sbjct: 188 ANASRMYKLGDGVDKDEAKA 207
>ref|NP_246550.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK03695.1| (AE006198) unknown [Pasteurella multocida]
Length = 172
Score = 85.5 bits (210), Expect = 6e-16
Identities = 46/147 (31%), Positives = 82/147 (55%), Gaps = 2/147 (1%)
Query: 26 EQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAA 85
E+DP + G ++YK D A K + + E S FN+G +Y G GVE++ ++A
Sbjct: 25 EEDP--VFEQGVEAYKRGDHATAFKLWLSRAEQGEMSAQFNVGRMYDDGDGVEQDKQQAL 82
Query: 86 SFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHD 145
+Y K+ + N+ + + LG +Y G G++Q+ +A ++YS++ A +LG +Y +
Sbjct: 83 KWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYAN 142
Query: 146 GKVVTRDFKKAVEYFTKACDLNDGDGC 172
G+ + RD+ +A YF +AC +GC
Sbjct: 143 GEGIERDWDRAKMYFKQACKAGLPEGC 169
Score = 73.9 bits (180), Expect = 2e-12
Identities = 36/107 (33%), Positives = 58/107 (53%)
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
+G +YD G G +D ++AL Y K+ + ++ G MY G+G ++FK+A YS+
Sbjct: 64 VGRMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQ 123
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
+ + +NLG + NGEG+ R+ +A FK+ CK G CD
Sbjct: 124 SAVQGDARALYNLGTLYANGEGIERDWDRAKMYFKQACKAGLPEGCD 170
Score = 64.3 bits (155), Expect = 1e-09
Identities = 31/106 (29%), Positives = 57/106 (53%)
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
+G +Y G GV Q+ +AL++Y K+ + + + LG +Y +G + +DFK+A +++++
Sbjct: 64 VGRMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQ 123
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGC 208
+ D LG+LY G G +D +A + +AC GC
Sbjct: 124 SAVQGDARALYNLGTLYANGEGIERDWDRAKMYFKQACKAGLPEGC 169
Score = 62.8 bits (151), Expect = 4e-09
Identities = 31/107 (28%), Positives = 58/107 (53%)
Query: 138 SLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYD 197
++G +Y DG V +D ++A++++ K+ + N D LG +Y G G +D K+A Y
Sbjct: 63 NVGRMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYS 122
Query: 198 KACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC 244
++ D+ +N G +Y +GEG +++ A + +AC+ GC
Sbjct: 123 QSAVQGDARALYNLGTLYANGEGIERDWDRAKMYFKQACKAGLPEGC 169
Score = 45.1 bits (105), Expect = 0.001
Identities = 21/67 (31%), Positives = 37/67 (54%)
Query: 209 FNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENF 268
FN G MY G+G ++ ++AL Y K+ E + ++LG M G+G+ ++ KQA + +
Sbjct: 62 FNVGRMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWY 121
Query: 269 KKGCKLG 275
+ G
Sbjct: 122 SQSAVQG 128
>ref|NP_460716.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL20675.1| (AE008778) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 509
Score = 85.1 bits (209), Expect = 8e-16
Identities = 67/255 (26%), Positives = 110/255 (42%), Gaps = 13/255 (5%)
Query: 40 YKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNG 99
Y + D+ A K+ EKA + F LG Y G+ + +KA +Y KA +L S+
Sbjct: 66 YVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSST 125
Query: 100 CHLLGNLYYSGQGVSQNTNKALQYYSKACD------LKYAEGCAS-----LGGIYHDGKV 148
+LG+ Y G G QNT AL++Y KA + +G AS LG +Y G+
Sbjct: 126 QEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQG 185
Query: 149 VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGC 208
V +D+++ KA + LG Y G G P+D ++A+ ++ +PG
Sbjct: 186 VPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGH 245
Query: 209 FNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENF 268
+Y A + + Y K + +N G YNG + ++ A+E +
Sbjct: 246 IPLNALYDKAHPADRVHSQTW--YRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWY 303
Query: 269 KKGCKLGAKGACDIL 283
++ G A D +
Sbjct: 304 RRAAAQGLAEAQDAI 318
Score = 80.1 bits (196), Expect = 3e-14
Identities = 61/260 (23%), Positives = 108/260 (41%), Gaps = 34/260 (13%)
Query: 61 NSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKA 120
+S F LGV+Y GQGV ++ ++ A KA + Y LG Y+ G+GV Q+ +A
Sbjct: 170 SSAQFKLGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQA 229
Query: 121 LQYYSKACDLKYAEGCASLGGIY----------------------------------HDG 146
+ + ++ Y G L +Y ++G
Sbjct: 230 VYWLNEGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNG 289
Query: 147 KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSP 206
+ +D A+E++ +A + +G ++ G G +D ++ALA Y KA
Sbjct: 290 YHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPA 349
Query: 207 GCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIE 266
+ G M G G ++ ++A+A Y KA + + + LG G GV N + A++
Sbjct: 350 AQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALK 409
Query: 267 NFKKGCKLGAKGACDILKQL 286
+ K + G A L ++
Sbjct: 410 WYLKAAEQGFTPAQSALGEI 429
Score = 78.2 bits (191), Expect = 1e-13
Identities = 51/172 (29%), Positives = 82/172 (47%), Gaps = 1/172 (0%)
Query: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
+N GV YY G + K+ A +Y +A + +G ++ G+GVSQ+ +AL +Y
Sbjct: 280 YNFGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWY 339
Query: 125 SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 184
KA LG + G+ V + ++A+ ++ KA + LG Y GRG
Sbjct: 340 RKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRG 399
Query: 185 TPKDLKKALASYDKACDLKDSPGCFNAGNMYHHG-EGATKNFKEALARYSKA 235
P++ + AL Y KA + +P G +Y HG +G K+ K+A Y A
Sbjct: 400 VPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWYYMA 451
Score = 72.8 bits (177), Expect = 4e-12
Identities = 57/223 (25%), Positives = 103/223 (45%), Gaps = 3/223 (1%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+D+ QA + + G L LY + ++ + ++Y K + +
Sbjct: 224 QDYRQAVYWLNEGIPGSYTPGHIPLNALYDKAHPADR--VHSQTWYRKTAQRVMAKVQYN 281
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
G YY+G + ++ N AL++Y +A AE ++G ++ G+ V++D+++A+ ++ K
Sbjct: 282 FGVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRK 341
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
A T LG + GRG + ++A+A Y KA + + G Y G G
Sbjct: 342 AARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVP 401
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNG-EGVTRNEKQA 264
+N + AL Y KA E LG + +G +GV ++ KQA
Sbjct: 402 ENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQA 444
Score = 67.0 bits (162), Expect = 2e-10
Identities = 47/147 (31%), Positives = 68/147 (45%), Gaps = 11/147 (7%)
Query: 138 SLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYD 197
SLG Y +G+ V D+K A+++ KA ILG Y+ G P +KAL Y
Sbjct: 56 SLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYR 115
Query: 198 KACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC-----------FN 246
KA +L DS G+ Y +G+G +N + AL Y KA N G F
Sbjct: 116 KAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFK 175
Query: 247 LGAMQYNGEGVTRNEKQAIENFKKGCK 273
LG M +G+GV ++ +Q +K +
Sbjct: 176 LGVMYAHGQGVPQDYQQTAILMRKAAE 202
>ref|NP_075565.1| (NM_023077) hypothetical protein FLJ12439 [Homo sapiens]
dbj|BAB14063.1| (AK022501) unnamed protein product [Homo sapiens]
Length = 231
Score = 85.1 bits (209), Expect = 8e-16
Identities = 63/189 (33%), Positives = 97/189 (50%), Gaps = 12/189 (6%)
Query: 59 KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN-YSNGCHLLGNLYYSGQG-VSQN 116
K+ GC+ L V Y +G + KN +AA C+ N +S+ C+ LG Y +G+G ++Q+
Sbjct: 32 KDPDGCYRL-VDYLEG--IRKNFDEAAKVLKFNCEENQHSDSCYKLGAHYVTGKGGLTQD 88
Query: 117 TNKALQYYSKACDL---KYAEGCASLGGIYHDGKVVTR---DFKKAVEYFTKACDLNDGD 170
A + + AC+ K C ++G + HDG+V D KA +Y+T+ACD
Sbjct: 89 LKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRACDGGYTS 148
Query: 171 GCTILGSLYDAGR-GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEAL 229
C L +++ G G PKD+ A KACDL C NA MY G+G K+ +A
Sbjct: 149 SCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRMYKLGDGVDKDEAKAE 208
Query: 230 ARYSKACEL 238
++A +L
Sbjct: 209 VLKNRAQQL 217
Score = 55.8 bits (133), Expect = 5e-07
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQG-QGVEKNLKKAASFYAKACDLNYSNGC 100
+ D +A+ Y+ +ACD S CFNL ++ QG G K++ A + KACDL + C
Sbjct: 128 QPDLGKARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWAC 187
Query: 101 HLLGNLYYSGQGVSQNTNKA 120
+Y G GV ++ KA
Sbjct: 188 ANASRMYKLGDGVDKDEAKA 207
>ref|NP_506144.1| (NM_073743) Yeast hypothetical gene L8167.5 like [Caenorhabditis
elegans]
pir||S68303 sel-1 protein - Caenorhabditis elegans
pir||T22223 sel-1 protein - Caenorhabditis elegans
gb|AAC47113.1| (U50829) SEL-1 [Caenorhabditis elegans]
emb|CAB01505.1| (Z78063) predicted using Genefinder~Similarity to Yeast predicted
gene L8167.5 (TR:G544502)~cDNA EST yk53e10.3 comes from
this gene~cDNA EST yk53e10.5 comes from this gene~cDNA
EST yk318c4.5 comes from this gene~cDNA EST yk342b8.3
comes from this gene~>
Length = 685
Score = 84.0 bits (206), Expect = 2e-15
Identities = 59/208 (28%), Positives = 102/208 (48%), Gaps = 9/208 (4%)
Query: 77 VEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEG 135
+E NL + A D + G LG +Y +G +G++QN A +Y A + A+
Sbjct: 272 LESNLLEYYKMLADKGDTSAQLG---LGQIYLAGGRGLNQNFELAFRYLLAAAESGSADA 328
Query: 136 CASLGGIYHDGKVVT-RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALA 194
LG +Y DG T +D++K+ EY K+ D + +LG++Y G+G K+ +KAL
Sbjct: 329 LTYLGKMYLDGTPFTPKDYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALK 388
Query: 195 SYDKACDLKDSPGCFNAGNMYHHG----EGATKNFKEALARYSKACELENGGGCFNLGAM 250
+ D K++ G +++ G +G ++FK+++ Y A + + +NL M
Sbjct: 389 LLTLSADKKNADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQM 448
Query: 251 QYNGEGVTRNEKQAIENFKKGCKLGAKG 278
G GV R+ A++ FK + G G
Sbjct: 449 HAAGTGVPRSCSHAVDLFKSVAERGKWG 476
Score = 68.2 bits (165), Expect = 1e-10
Identities = 62/270 (22%), Positives = 108/270 (39%), Gaps = 44/270 (16%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
L + KD+ ++ +Y K+ D S LG +Y +G+GV+KN +KA + D
Sbjct: 337 LDGTPFTPKDYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALKLLTLSADK 396
Query: 95 NYSNGCHLLGNLYYSG----QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVT 150
++G L L+Y G +GV ++ K+++ Y A + +L ++ G V
Sbjct: 397 KNADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQMHAAGTGVP 456
Query: 151 RDFKKAVEYFTKA--------------------------------CDLNDGDGCTILGSL 178
R AV+ F +L T L +
Sbjct: 457 RSCSHAVDLFKSVAERGKWGERLMEAHSAYKDNRVDEAAMKYLFMAELGYEVAQTNLAYI 516
Query: 179 YDAGRGT-----PKD--LKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALAR 231
D G T PKD +++A ++ ++ + + + G+ Y++G G + A +
Sbjct: 517 LDRGEATSLFSGPKDNNMERAFLNWQRSANQEYAAARVKLGDYYYYGLGTEVDHSLAFSN 576
Query: 232 YSKACELEN-GGGCFNLGAMQYNGEGVTRN 260
Y A + FNLG M GEG+TR+
Sbjct: 577 YKMAVDRHGVAQAMFNLGYMHEVGEGITRD 606
>gb|AAC47112.1| (U50828) sel-1 gene product [Caenorhabditis elegans]
Length = 685
Score = 84.0 bits (206), Expect = 2e-15
Identities = 59/208 (28%), Positives = 102/208 (48%), Gaps = 9/208 (4%)
Query: 77 VEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEG 135
+E NL + A D + G LG +Y +G +G++QN A +Y A + A+
Sbjct: 272 LESNLLEYYKMLADKGDTSAQLG---LGQIYLAGGRGLNQNFELAFRYLLAAAESGSADA 328
Query: 136 CASLGGIYHDGKVVT-RDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALA 194
LG +Y DG T +D++K+ EY K+ D + +LG++Y G+G K+ +KAL
Sbjct: 329 LTYLGKMYLDGTPFTPKDYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALK 388
Query: 195 SYDKACDLKDSPGCFNAGNMYHHG----EGATKNFKEALARYSKACELENGGGCFNLGAM 250
+ D K++ G +++ G +G ++FK+++ Y A + + +NL M
Sbjct: 389 LLTLSADKKNADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQM 448
Query: 251 QYNGEGVTRNEKQAIENFKKGCKLGAKG 278
G GV R+ A++ FK + G G
Sbjct: 449 HAAGTGVPRSCSHAVDLFKSVAERGKWG 476
Score = 68.6 bits (166), Expect = 8e-11
Identities = 62/270 (22%), Positives = 108/270 (39%), Gaps = 44/270 (16%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
L + KD+ ++ +Y K+ D S LG +Y +G+GV+KN +KA + D
Sbjct: 337 LDGTPFTPKDYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALKLLTLSADK 396
Query: 95 NYSNGCHLLGNLYYSG----QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVT 150
++G L L+Y G +GV ++ K+++ Y A + +L ++ G V
Sbjct: 397 KNADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQMHAAGTGVP 456
Query: 151 RDFKKAVEYFTKA--------------------------------CDLNDGDGCTILGSL 178
R AV+ F +L T L +
Sbjct: 457 RSCSHAVDLFKSVAERGKWGERLMEAHSAYKDNRVDEAAMKYLFMAELGYEVAQTNLAYI 516
Query: 179 YDAGRGT-----PKD--LKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALAR 231
D G T PKD +++A ++ ++ + + + G+ Y++G G + A +
Sbjct: 517 LDRGEATSLFSGPKDNNMERAFLNWQRSANQEYAAARVKLGDYYYYGLGTEVDHSLAFSN 576
Query: 232 YSKACELEN-GGGCFNLGAMQYNGEGVTRN 260
Y A + FNLG M GEG+TR+
Sbjct: 577 YKMAVDXHGVAQAMFNLGYMHEVGEGITRD 606
>ref|XP_131544.1| (XM_131544) RIKEN cDNA 2010305A19 [Mus musculus]
gb|AAH12391.1|AAH12391 (BC012391) Similar to hypothetical protein FLJ12439 [Mus musculus]
Length = 231
Score = 83.6 bits (205), Expect = 2e-15
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 12/189 (6%)
Query: 59 KENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACD-LNYSNGCHLLGNLYYSGQG-VSQN 116
K+ GC+ L V Y +G ++KN +AA C+ + + C+ LG Y +G+G ++Q+
Sbjct: 32 KDPEGCYRL-VDYLEG--IQKNFDEAAKVLKFNCEKYGHGDSCYKLGAYYVTGKGGLTQD 88
Query: 117 TNKALQYYSKACDL---KYAEGCASLGGIYHDGKVVTR---DFKKAVEYFTKACDLNDGD 170
A + AC+ K E C ++G + HDG+V D KA +Y+++ACD
Sbjct: 89 LKAASSCFLMACEKPGKKSVESCHNVGLLAHDGQVNEDGQPDLGKARDYYSRACDGGYAA 148
Query: 171 GCTILGSLYDAGR-GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEAL 229
C L +++ G G PKD+ A KACDL C NA MY G+G K+ +A
Sbjct: 149 SCFNLSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWACANASRMYKLGDGVDKDEAKAE 208
Query: 230 ARYSKACEL 238
++A +L
Sbjct: 209 VLKNRARQL 217
Score = 53.9 bits (128), Expect = 2e-06
Identities = 27/80 (33%), Positives = 42/80 (51%), Gaps = 1/80 (1%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQG-QGVEKNLKKAASFYAKACDLNYSNGC 100
+ D +A+ Y+ +ACD + CFNL ++ QG G K++ A + KACDL + C
Sbjct: 128 QPDLGKARDYYSRACDGGYAASCFNLSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWAC 187
Query: 101 HLLGNLYYSGQGVSQNTNKA 120
+Y G GV ++ KA
Sbjct: 188 ANASRMYKLGDGVDKDEAKA 207
>ref|NP_564049.1| (NM_101684) expressed protein [Arabidopsis thaliana]
gb|AAF78381.1|AC069551_14 (AC069551) T10O22.22 [Arabidopsis thaliana]
Length = 678
Score = 83.6 bits (205), Expect = 2e-15
Identities = 54/175 (30%), Positives = 83/175 (46%), Gaps = 2/175 (1%)
Query: 65 FNLGVLYYQG-QGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQY 123
+ +G+ YY G +G+ ++ KA ++ KA D LLG +Y G GV +N KAL++
Sbjct: 246 YKIGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEW 305
Query: 124 YSKACDLKYAEGCASLGGIYHDGKVVTR-DFKKAVEYFTKACDLNDGDGCTILGSLYDAG 182
+ A +G +Y G V + ++ KA EYF KA D D G LG LY G
Sbjct: 306 LTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKG 365
Query: 183 RGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE 237
G +D+++A + A + + M+H G G KN + A + Y E
Sbjct: 366 IGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVAE 420
Score = 82.0 bits (201), Expect = 7e-15
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 52/244 (21%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
+K++T+A++YFEKA D ++ SG +NLGVLY +G GV +++++A ++ A + +
Sbjct: 333 KKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFFVAANAGQPKAFY 392
Query: 102 LLGNLYYSGQGVSQN--------------------------------TNKALQYYSKACD 129
L ++++G G+ +N KAL YS+ +
Sbjct: 393 QLAKMFHTGVGLKKNLEMATSFYKLVAERGPWSSLSRWALEAYLKGDVGKALILYSRMAE 452
Query: 130 L--------------KYAEG--CASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCT 173
+ KY E C + G D + ++A + +A + +
Sbjct: 453 MGYEVAQSNAAWILDKYGERSMCMGVSGFCTDKE----RHERAHSLWWRASEQGNEHAAL 508
Query: 174 ILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYS 233
++G Y GRGT +D +A +Y A ++ FN G M+ HG+G + A Y
Sbjct: 509 LIGDAYYYGRGTERDFVRAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYD 568
Query: 234 KACE 237
++ +
Sbjct: 569 ESLQ 572
Score = 77.4 bits (189), Expect = 2e-13
Identities = 51/155 (32%), Positives = 76/155 (48%), Gaps = 1/155 (0%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+D T+A +F KA D E LG +Y +G GVE+N KA + A + +
Sbjct: 261 RDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTLAAKEGLYSAFNG 320
Query: 103 LGNLYYSGQGV-SQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
+G LY G GV +N KA +Y+ KA D + G +LG +Y G V RD ++A +YF
Sbjct: 321 IGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFF 380
Query: 162 KACDLNDGDGCTILGSLYDAGRGTPKDLKKALASY 196
A + L ++ G G K+L+ A + Y
Sbjct: 381 VAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFY 415
Score = 73.6 bits (179), Expect = 2e-12
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 2/175 (1%)
Query: 97 SNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKK 155
+N + +G YY G +G+ ++ KAL ++ KA D LG IY G V R++ K
Sbjct: 242 ANAMYKIGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTK 301
Query: 156 AVEYFTKACDLNDGDGCTILGSLYDAGRGTPK-DLKKALASYDKACDLKDSPGCFNAGNM 214
A+E+ T A +G LY G G K + KA ++KA D +D G +N G +
Sbjct: 302 ALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVL 361
Query: 215 YHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFK 269
Y G G ++ ++A + A + L M + G G+ +N + A +K
Sbjct: 362 YLKGIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYK 416
Score = 58.2 bits (139), Expect = 1e-07
Identities = 57/265 (21%), Positives = 100/265 (37%), Gaps = 53/265 (20%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVE-KNLKKAASFYAKACDLNYSNGC 100
E+++T+A ++ A S +G LY +G GV+ KN KA ++ KA D +G
Sbjct: 296 ERNYTKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGH 355
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
+ LG LY G GV+++ +A +Y+ A + + L ++H G + ++ + A ++
Sbjct: 356 YNLGVLYLKGIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFY 415
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNA--------- 211
+ S + D+ KAL Y + ++ NA
Sbjct: 416 KLVAERGPWSSL----SRWALEAYLKGDVGKALILYSRMAEMGYEVAQSNAAWILDKYGE 471
Query: 212 ------------------------------GNMY---------HHGEGATKNFKEALARY 232
GN + ++G G ++F A Y
Sbjct: 472 RSMCMGVSGFCTDKERHERAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAY 531
Query: 233 SKACELENGGGCFNLGAMQYNGEGV 257
A N FNLG M +G+G+
Sbjct: 532 MHAKSQSNAQAMFNLGYMHEHGQGL 556
>ref|NP_273467.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||F81200 conserved hypothetical protein NMB0419 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF40857.1| (AE002398) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 198
Score = 83.2 bits (204), Expect = 3e-15
Identities = 46/146 (31%), Positives = 78/146 (52%)
Query: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
+NLG +YY+G+GV ++ +A +Y +A + + + LG +Y +G+GV Q+ +A+++Y
Sbjct: 45 YNLGAMYYKGRGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANGRGVRQDDTEAVRWY 104
Query: 125 SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 184
+A + +LG IY +G+ V +D +AV +F +A LG +Y RG
Sbjct: 105 RQAAAQGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQNNLGVMYAERRG 164
Query: 185 TPKDLKKALASYDKACDLKDSPGCFN 210
+D A + KAC D GC N
Sbjct: 165 VRQDRALAQEWFGKACQNGDQDGCDN 190
Score = 71.2 bits (173), Expect = 1e-11
Identities = 43/142 (30%), Positives = 75/142 (52%), Gaps = 4/142 (2%)
Query: 35 LGAKSYK----EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAK 90
LGA YK +D +A +++ +A + +NLG +Y G+GV ++ +A +Y +
Sbjct: 47 LGAMYYKGRGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANGRGVRQDDTEAVRWYRQ 106
Query: 91 ACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVT 150
A + LG +Y G+GV Q+ +A++++ +A A+ +LG +Y + + V
Sbjct: 107 AAAQGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQNNLGVMYAERRGVR 166
Query: 151 RDFKKAVEYFTKACDLNDGDGC 172
+D A E+F KAC D DGC
Sbjct: 167 QDRALAQEWFGKACQNGDQDGC 188
Score = 63.9 bits (154), Expect = 2e-09
Identities = 44/150 (29%), Positives = 71/150 (47%)
Query: 138 SLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYD 197
+LG +Y+ G+ V RD +AV ++ +A + LG +Y GRG +D +A+ Y
Sbjct: 46 NLGAMYYKGRGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANGRGVRQDDTEAVRWYR 105
Query: 198 KACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGV 257
+A +N G +Y G G ++ EA+ + +A NLG M GV
Sbjct: 106 QAAAQGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQNNLGVMYAERRGV 165
Query: 258 TRNEKQAIENFKKGCKLGAKGACDILKQLK 287
++ A E F K C+ G + CD ++LK
Sbjct: 166 RQDRALAQEWFGKACQNGDQDGCDNDQRLK 195
Score = 43.5 bits (101), Expect = 0.003
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 209 FNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENF 268
+N G MY+ G G ++ EA+ Y +A E +NLG M NG GV +++ +A+ +
Sbjct: 45 YNLGAMYYKGRGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANGRGVRQDDTEAVRWY 104
Query: 269 KKGCKLG 275
++ G
Sbjct: 105 RQAAAQG 111
>gb|AAK64159.1| (AY039982) unknown protein [Arabidopsis thaliana]
Length = 678
Score = 82.0 bits (201), Expect = 7e-15
Identities = 58/244 (23%), Positives = 107/244 (43%), Gaps = 52/244 (21%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
+K++T+A++YFEKA D ++ SG +NLGVLY +G GV +++++A ++ A + +
Sbjct: 333 KKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFFVAANAGQPKAFY 392
Query: 102 LLGNLYYSGQGVSQN--------------------------------TNKALQYYSKACD 129
L ++++G G+ +N KAL YS+ +
Sbjct: 393 QLAKMFHTGVGLKKNLEMATSFYKLVAERGPWSSLSRWALEAYLKGDVGKALILYSRMAE 452
Query: 130 L--------------KYAEG--CASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCT 173
+ KY E C + G D + ++A + +A + +
Sbjct: 453 MGYEVAQSNAAWILDKYGERSMCMGVSGFCTDKE----RHERAHSLWWRASEQGNEHAAL 508
Query: 174 ILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYS 233
++G Y GRGT +D +A +Y A ++ FN G M+ HG+G + A Y
Sbjct: 509 LIGDAYYYGRGTERDFVRAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFDLHLAKRYYD 568
Query: 234 KACE 237
++ +
Sbjct: 569 ESLQ 572
Score = 81.6 bits (200), Expect = 9e-15
Identities = 54/172 (31%), Positives = 81/172 (46%), Gaps = 2/172 (1%)
Query: 68 GVLYYQG-QGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSK 126
G+ YY G +G+ ++ KA ++ KA D LLG +Y G GV +N KAL++ +
Sbjct: 249 GLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTL 308
Query: 127 ACDLKYAEGCASLGGIYHDGKVVTR-DFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGT 185
A +G +Y G V + ++ KA EYF KA D D G LG LY G G
Sbjct: 309 AAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGV 368
Query: 186 PKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE 237
+D+++A + A + + M+H G G KN + A + Y E
Sbjct: 369 NRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVAE 420
Score = 77.4 bits (189), Expect = 2e-13
Identities = 51/155 (32%), Positives = 76/155 (48%), Gaps = 1/155 (0%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+D T+A +F KA D E LG +Y +G GVE+N KA + A + +
Sbjct: 261 RDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTLAAKEGLYSAFNG 320
Query: 103 LGNLYYSGQGV-SQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
+G LY G GV +N KA +Y+ KA D + G +LG +Y G V RD ++A +YF
Sbjct: 321 IGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFF 380
Query: 162 KACDLNDGDGCTILGSLYDAGRGTPKDLKKALASY 196
A + L ++ G G K+L+ A + Y
Sbjct: 381 VAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFY 415
Score = 71.6 bits (174), Expect = 9e-12
Identities = 51/175 (29%), Positives = 81/175 (46%), Gaps = 2/175 (1%)
Query: 97 SNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKK 155
+N + G YY G +G+ ++ KAL ++ KA D LG IY G V R++ K
Sbjct: 242 ANAMYKNGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTK 301
Query: 156 AVEYFTKACDLNDGDGCTILGSLYDAGRGTPK-DLKKALASYDKACDLKDSPGCFNAGNM 214
A+E+ T A +G LY G G K + KA ++KA D +D G +N G +
Sbjct: 302 ALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVL 361
Query: 215 YHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFK 269
Y G G ++ ++A + A + L M + G G+ +N + A +K
Sbjct: 362 YLKGIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYK 416
Score = 58.2 bits (139), Expect = 1e-07
Identities = 57/265 (21%), Positives = 100/265 (37%), Gaps = 53/265 (20%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVE-KNLKKAASFYAKACDLNYSNGC 100
E+++T+A ++ A S +G LY +G GV+ KN KA ++ KA D +G
Sbjct: 296 ERNYTKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGH 355
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
+ LG LY G GV+++ +A +Y+ A + + L ++H G + ++ + A ++
Sbjct: 356 YNLGVLYLKGIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFY 415
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNA--------- 211
+ S + D+ KAL Y + ++ NA
Sbjct: 416 KLVAERGPWSSL----SRWALEAYLKGDVGKALILYSRMAEMGYEVAQSNAAWILDKYGE 471
Query: 212 ------------------------------GNMY---------HHGEGATKNFKEALARY 232
GN + ++G G ++F A Y
Sbjct: 472 RSMCMGVSGFCTDKERHERAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAY 531
Query: 233 SKACELENGGGCFNLGAMQYNGEGV 257
A N FNLG M +G+G+
Sbjct: 532 MHAKSQSNAQAMFNLGYMHEHGQGL 556
>dbj|BAB25716.1| (AK008518) data source:SPTR, source key:Q9H9Z9,
evidence:ISS~homolog to CDNA FLJ12439 FIS, CLONE
NT2RM1000127~putative [Mus musculus]
Length = 204
Score = 81.6 bits (200), Expect = 9e-15
Identities = 60/185 (32%), Positives = 94/185 (50%), Gaps = 12/185 (6%)
Query: 63 GCFNLGVLYYQGQGVEKNLKKAASFYAKACD-LNYSNGCHLLGNLYYSGQG-VSQNTNKA 120
GC+ L V Y +G ++KN +AA C+ + + C+ LG Y +G+G ++Q+ A
Sbjct: 9 GCYRL-VDYLEG--IQKNFDEAAKVLKFNCEKYGHGDSCYKLGAYYVTGKGGLTQDLKAA 65
Query: 121 LQYYSKACDL---KYAEGCASLGGIYHDGKVVTR---DFKKAVEYFTKACDLNDGDGCTI 174
+ AC+ K E C ++G + HDG+V D KA +Y+++ACD C
Sbjct: 66 SSCFLMACEKPGKKSVESCHNVGLLAHDGQVNEDGQPDLGKARDYYSRACDGGYAASCFN 125
Query: 175 LGSLYDAGR-GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYS 233
L +++ G G PKD+ A KACDL C NA MY G+G K+ +A +
Sbjct: 126 LSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWACANASRMYKLGDGVDKDEAKAEVLKN 185
Query: 234 KACEL 238
+A +L
Sbjct: 186 RARQL 190
Score = 53.9 bits (128), Expect = 2e-06
Identities = 27/80 (33%), Positives = 42/80 (51%), Gaps = 1/80 (1%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQG-QGVEKNLKKAASFYAKACDLNYSNGC 100
+ D +A+ Y+ +ACD + CFNL ++ QG G K++ A + KACDL + C
Sbjct: 101 QPDLGKARDYYSRACDGGYAASCFNLSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWAC 160
Query: 101 HLLGNLYYSGQGVSQNTNKA 120
+Y G GV ++ KA
Sbjct: 161 ANASRMYKLGDGVDKDEAKA 180
>emb|CAB65792.2| (AL109657) dJ842G6.2 (novel protein imilar to SEL1L (sel-1
(suppressor of lin-12, C.elegans)-like)) [Homo sapiens]
Length = 505
Score = 80.1 bits (196), Expect = 3e-14
Identities = 60/227 (26%), Positives = 98/227 (42%), Gaps = 2/227 (0%)
Query: 66 NLGVLYYQGQ-GVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQG-VSQNTNKALQY 123
+LG L+ G+ G++++ KA ++ KA +N +G +Y G V QN A +Y
Sbjct: 119 SLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKY 178
Query: 124 YSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR 183
+S A A G LG +Y GK V ++ +A++YF KA + D LG +Y +G
Sbjct: 179 FSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGS 238
Query: 184 GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGG 243
G KD K A + A + MY G G ++ + A+ Y CEL +
Sbjct: 239 GIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWAE 298
Query: 244 CFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIKV 290
F Y + + Q + G ++ + IL+ K +
Sbjct: 299 KFLTAYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANI 345
Score = 79.0 bits (193), Expect = 6e-14
Identities = 46/162 (28%), Positives = 78/162 (47%), Gaps = 1/162 (0%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQG-VEKNLKKAASFYAKACDLNYSNGC 100
++D+ +A YF KA + +G +Y +G V +N A +++ A + G
Sbjct: 132 DQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGL 191
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
H LG LY+ G+GV N +AL+Y+ KA + + + LG +Y+ G + +D+K A +YF
Sbjct: 192 HGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYF 251
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
A L +Y G G + + A+ Y C+L
Sbjct: 252 YLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCEL 293
Score = 73.6 bits (179), Expect = 2e-12
Identities = 62/250 (24%), Positives = 105/250 (41%), Gaps = 37/250 (14%)
Query: 48 AKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 107
A KYF A G LG+LY+ G+GV N +A ++ KA + + + LG +Y
Sbjct: 175 AFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMY 234
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 167
YSG G+ ++ A +Y+ A L +Y G V R + AVE + C+L
Sbjct: 235 YSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELG 294
Query: 168 --------------DGD--------------GCTILGS----LYDAGRGTPKDLKK---- 191
DGD G + S + ++ + + +K
Sbjct: 295 HWAEKFLTAYFAYKDGDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPM 354
Query: 192 ALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKAC-ELENGGGCFNLGAM 250
AL +++A ++ G+ +++G G K+++ A YS A + N FNL M
Sbjct: 355 ALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYHNAQAMFNLAYM 414
Query: 251 QYNGEGVTRN 260
+G G+T++
Sbjct: 415 YEHGLGITKD 424
Score = 52.4 bits (124), Expect = 6e-06
Identities = 47/200 (23%), Positives = 78/200 (38%), Gaps = 9/200 (4%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
KD+ A KYF A + + L +Y G GV ++ + A Y C+L + L
Sbjct: 242 KDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGHWAEKFL 301
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKK----AVE 158
Y + + +L Y+ ++ Y ++ I K + +K A+
Sbjct: 302 TAYFAYKDGDI----DSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKMYPMALL 357
Query: 159 YFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACD-LKDSPGCFNAGNMYHH 217
+ +A + +G + G GT KD + A Y A + ++ FN MY H
Sbjct: 358 LWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYHNAQAMFNLAYMYEH 417
Query: 218 GEGATKNFKEALARYSKACE 237
G G TK+ A Y A +
Sbjct: 418 GLGITKDIHLARRLYDMAAQ 437
>ref|NP_177498.1| (NM_106015) hypothetical protein [Arabidopsis thaliana]
gb|AAG51809.1|AC079676_4 (AC079676) hypothetical protein; 26401-23451 [Arabidopsis thaliana]
Length = 604
Score = 78.6 bits (192), Expect = 8e-14
Identities = 64/259 (24%), Positives = 113/259 (42%), Gaps = 55/259 (21%)
Query: 31 ELVGLG---AKSY--KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAA 85
E GLG K Y ++++T+A++YFE A + ++ SG +NLGVLY +G GV+K+++ A
Sbjct: 275 EFNGLGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHAT 334
Query: 86 SFYAKACDLNYSNGCHLLGNLYYSGQGVSQN----------------------------- 116
++ A + + L ++++G G+++N
Sbjct: 335 KYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYKLVAERGPWSSLSRWALEAYL 394
Query: 117 ---TNKALQYYSKACDL--------------KYAEGCASLGGIYHDGKVVTRD-FKKAVE 158
KA YS+ +L KY E +G +Y G ++ +A
Sbjct: 395 KGDVGKAFILYSRMSELGYEVAQSNAAWIVDKYGERSMCMG-VY--GFCTDKERHDRAHS 451
Query: 159 YFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHG 218
+ +A + + ++G Y GRGT +D +A +Y A ++ FN G M+ HG
Sbjct: 452 LWWRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAYMYAKSQSNAQAMFNLGYMHEHG 511
Query: 219 EGATKNFKEALARYSKACE 237
EG + A Y +A +
Sbjct: 512 EGLPFDLHLAKRYYDQALQ 530
Score = 62.0 bits (149), Expect = 7e-09
Identities = 46/139 (33%), Positives = 64/139 (45%), Gaps = 9/139 (6%)
Query: 101 HLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVT-RDFKKAVE 158
H +G YY G +G+ ++ KAL ++SKA LG +Y G V R++ KA E
Sbjct: 247 HKIGLFYYFGLRGLRRDHAKALYWFSKA-------EFNGLGYLYVKGYGVDKRNYTKARE 299
Query: 159 YFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHG 218
YF A + D G LG LY G G KD++ A + A + + M+H G
Sbjct: 300 YFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQLAKMFHTG 359
Query: 219 EGATKNFKEALARYSKACE 237
G TKN + A Y E
Sbjct: 360 VGLTKNLEMATTFYKLVAE 378
Score = 52.4 bits (124), Expect = 6e-06
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEK-NLKKAASFYAKACDLNYSNGCH 101
+D +A +F KA E +G LG LY +G GV+K N KA ++ A + +G +
Sbjct: 262 RDHAKALYWFSKA----EFNG---LGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHY 314
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
LG LY G GV ++ A +Y+ A + + L ++H G +T++ + A ++
Sbjct: 315 NLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFY 373
Score = 49.3 bits (116), Expect = 5e-05
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 139 LGGIYHDG-KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPK-DLKKALASY 196
+G Y+ G + + RD KA+ +F+KA + N LG LY G G K + KA +
Sbjct: 249 IGLFYYFGLRGLRRDHAKALYWFSKA-EFNG------LGYLYVKGYGVDKRNYTKAREYF 301
Query: 197 DKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEG 256
+ A + +D G +N G +Y G G K+ + A + A + L M + G G
Sbjct: 302 EMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQLAKMFHTGVG 361
Query: 257 VTRNEKQAIENFK 269
+T+N + A +K
Sbjct: 362 LTKNLEMATTFYK 374
>ref|NP_284256.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491]
pir||H81845 hypothetical protein NMA1541 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84768.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491]
Length = 477
Score = 78.2 bits (191), Expect = 1e-13
Identities = 63/251 (25%), Positives = 109/251 (43%), Gaps = 28/251 (11%)
Query: 47 QAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL 106
+A +F++A + L +Y QG+ E+N K A A + G +LG++
Sbjct: 236 EAVHWFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERHPEGLRILGDI 295
Query: 107 YYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDF-----------KK 155
Y G G++ + KAL YY +A + A A+ + D + D ++
Sbjct: 296 YRYGLGMTSDKEKALHYYRQAAE---AGSLAAYQKLISDSALNHPDQYGGIKDSAIRRQR 352
Query: 156 AVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMY 215
A + KA L+ G C + AL Y +A +L S N G+MY
Sbjct: 353 AERLYQKAQALHYGLQCA-------------PEYAAALKLYTEAAELGHSKAQTNLGSMY 399
Query: 216 HHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
+ G+G T ++ EA + KA ++ +NL + YNG GV ++++A ++ G
Sbjct: 400 YFGQGMTADYNEARKWFEKAAAQKDSMALYNLACIHYNGHGVEPDKEKACRYLQEAINNG 459
Query: 276 AKGACDILKQL 286
G +L++L
Sbjct: 460 -YGQKSVLQEL 469
Score = 69.3 bits (168), Expect = 5e-11
Identities = 63/258 (24%), Positives = 103/258 (39%), Gaps = 36/258 (13%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
DF A + KA + + LG+ Y GQG + + +A + A Y L
Sbjct: 166 DFETAHLLYRKAAAQGLAAAHWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPL 225
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
L + ++A+ ++ +A + A+L IY GK R++K A+ + A
Sbjct: 226 AELI-----LPTAPDEAVHWFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAA 280
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACD---------------------- 201
+G ILG +Y G G D +KAL Y +A +
Sbjct: 281 AAERHPEGLRILGDIYRYGLGMTSDKEKALHYYRQAAEAGSLAAYQKLISDSALNHPDQY 340
Query: 202 --LKDS-------PGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQY 252
+KDS + H+G + AL Y++A EL + NLG+M Y
Sbjct: 341 GGIKDSAIRRQRAERLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYY 400
Query: 253 NGEGVTRNEKQAIENFKK 270
G+G+T + +A + F+K
Sbjct: 401 FGQGMTADYNEARKWFEK 418
Score = 51.2 bits (121), Expect = 1e-05
Identities = 26/91 (28%), Positives = 47/91 (51%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
++ A K + +A +L + NLG +YY GQG+ + +A ++ KA S + L
Sbjct: 372 EYAAALKLYTEAAELGHSKAQTNLGSMYYFGQGMTADYNEARKWFEKAAAQKDSMALYNL 431
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAE 134
++Y+G GV + KA +Y +A + Y +
Sbjct: 432 ACIHYNGHGVEPDKEKACRYLQEAINNGYGQ 462
>ref|NP_420846.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK24014.1| (AE005877) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 330
Score = 77.4 bits (189), Expect = 2e-13
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 1/159 (0%)
Query: 48 AKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 107
A+ ++ ++ + +G F GV +G G + ++ + +A ++ + + LG L+
Sbjct: 148 ARAWYLRSGEAGLAAGAFGAGVALLEGYGGRSDARRGVLWLRRAIEMGSAEAMNELGRLH 207
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN 167
G GVS +++KAL +Y A + + LG +++G++ R++ A+ +F A D
Sbjct: 208 AEGLGVSSDSDKALYFYRAAARNELPDAMYRLGAAHYNGRLTDRNYVVAMRWFQLAADRG 267
Query: 168 DGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSP 206
D D LG + + GRG D + AL Y +A D D P
Sbjct: 268 DYDAWFALGVMCETGRGVKSDRELALQMYRRAAD-SDQP 305
Score = 73.9 bits (180), Expect = 2e-12
Identities = 53/231 (22%), Positives = 97/231 (41%), Gaps = 1/231 (0%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQG-QGVEKNLKKAASFYAKACDLNYSNG 99
+E D + + KA L + LG LY G +G+ + A YA+A L N
Sbjct: 68 REPDVAKGLVWLRKAVALGDTDAMVELGNLYLFGAEGLAVDAPGAVKLYARAARLGDPNA 127
Query: 100 CHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEY 159
+ ++ G G+ +N A +Y ++ + A G G +G D ++ V +
Sbjct: 128 MFNMAVMHRGGYGLPENPRLARAWYLRSGEAGLAAGAFGAGVALLEGYGGRSDARRGVLW 187
Query: 160 FTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGE 219
+A ++ + LG L+ G G D KAL Y A + + G +++G
Sbjct: 188 LRRAIEMGSAEAMNELGRLHAEGLGVSSDSDKALYFYRAAARNELPDAMYRLGAAHYNGR 247
Query: 220 GATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 270
+N+ A+ + A + + F LG M G GV + + A++ +++
Sbjct: 248 LTDRNYVVAMRWFQLAADRGDYDAWFALGVMCETGRGVKSDRELALQMYRR 298
Score = 60.1 bits (144), Expect = 3e-08
Identities = 49/224 (21%), Positives = 97/224 (42%), Gaps = 1/224 (0%)
Query: 53 EKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG-Q 111
E+A + + S +L + + +G+G E ++ K + KA L ++ LGNLY G +
Sbjct: 44 ERAAEGGDTSFYVDLAICHIRGEGREPDVAKGLVWLRKAVALGDTDAMVELGNLYLFGAE 103
Query: 112 GVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDG 171
G++ + A++ Y++A L ++ ++ G + + + A ++ ++ + G
Sbjct: 104 GLAVDAPGAVKLYARAARLGDPNAMFNMAVMHRGGYGLPENPRLARAWYLRSGEAGLAAG 163
Query: 172 CTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALAR 231
G G G D ++ + +A ++ + G ++ G G + + +AL
Sbjct: 164 AFGAGVALLEGYGGRSDARRGVLWLRRAIEMGSAEAMNELGRLHAEGLGVSSDSDKALYF 223
Query: 232 YSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
Y A E + LGA YNG RN A+ F+ G
Sbjct: 224 YRAAARNELPDAMYRLGAAHYNGRLTDRNYVVAMRWFQLAADRG 267
Score = 50.4 bits (119), Expect = 2e-05
Identities = 38/136 (27%), Positives = 59/136 (42%), Gaps = 1/136 (0%)
Query: 152 DFKKAVEYFTKACDLNDGDGCTILGSLYDAG-RGTPKDLKKALASYDKACDLKDSPGCFN 210
D K + + KA L D D LG+LY G G D A+ Y +A L D FN
Sbjct: 71 DVAKGLVWLRKAVALGDTDAMVELGNLYLFGAEGLAVDAPGAVKLYARAARLGDPNAMFN 130
Query: 211 AGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 270
M+ G G +N + A A Y ++ E G F G G G + ++ + ++
Sbjct: 131 MAVMHRGGYGLPENPRLARAWYLRSGEAGLAAGAFGAGVALLEGYGGRSDARRGVLWLRR 190
Query: 271 GCKLGAKGACDILKQL 286
++G+ A + L +L
Sbjct: 191 AIEMGSAEAMNELGRL 206
>ref|XP_046437.2| (XM_046437) similar to dJ842G6.2 (novel protein imilar to SEL1L
(sel-1 (suppressor of lin-12, C.elegans)-like)) [Homo
sapiens]
Length = 387
Score = 74.3 bits (181), Expect = 1e-12
Identities = 66/250 (26%), Positives = 95/250 (37%), Gaps = 48/250 (19%)
Query: 67 LGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSK 126
LG L G G+E + KA +Y +LG Y SG V QN AL YY K
Sbjct: 73 LGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALSYYKK 132
Query: 127 ACD-----LKYAEGC-----------------------------------------ASLG 140
D + +EG SLG
Sbjct: 133 VADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLG 192
Query: 141 GIYHDG-KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGT-PKDLKKALASYDK 198
++ G K + +D+ KA+ YF KA + +G +Y G P++ A +
Sbjct: 193 QLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSM 252
Query: 199 ACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVT 258
A ++ G G +Y HG+G N+ EAL + KA E F LG M Y+G G+
Sbjct: 253 AASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIW 312
Query: 259 RNEKQAIENF 268
++ K A + F
Sbjct: 313 KDYKLAFKYF 322
Score = 73.6 bits (179), Expect = 2e-12
Identities = 52/166 (31%), Positives = 79/166 (47%), Gaps = 2/166 (1%)
Query: 103 LGNLYYSGQ-GVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKV-VTRDFKKAVEYF 160
LG L+ G+ G+ Q+ KAL Y+ KA A A +G +Y +G V ++ A +YF
Sbjct: 191 LGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYF 250
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEG 220
+ A + G LG LY G+G P + +AL + KA + F G MY+ G G
Sbjct: 251 SMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSG 310
Query: 221 ATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIE 266
K++K A + A + + L M G GV R+ + A+E
Sbjct: 311 IWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVE 356
Score = 72.8 bits (177), Expect = 4e-12
Identities = 43/153 (28%), Positives = 74/153 (48%), Gaps = 1/153 (0%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQG-VEKNLKKAASFYAKACDLNYSNGC 100
++D+ +A YF KA + +G +Y +G V +N A +++ A + G
Sbjct: 203 DQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGL 262
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
H LG LY+ G+GV N +AL+Y+ KA + + + LG +Y+ G + +D+K A +YF
Sbjct: 263 HGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYF 322
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKAL 193
A L +Y G G + + A+
Sbjct: 323 YLASQSGQPLAIYYLAKMYATGTGVVRSCRTAV 355
Score = 72.0 bits (175), Expect = 7e-12
Identities = 49/168 (29%), Positives = 79/168 (46%), Gaps = 2/168 (1%)
Query: 66 NLGVLYYQGQ-GVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQG-VSQNTNKALQY 123
+LG L+ G+ G++++ KA ++ KA +N +G +Y G V QN A +Y
Sbjct: 190 SLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKY 249
Query: 124 YSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR 183
+S A A G LG +Y GK V ++ +A++YF KA + D LG +Y +G
Sbjct: 250 FSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGS 309
Query: 184 GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALAR 231
G KD K A + A + MY G G ++ + A+ +
Sbjct: 310 GIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVEK 357
Score = 59.3 bits (142), Expect = 5e-08
Identities = 35/111 (31%), Positives = 52/111 (46%)
Query: 48 AKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY 107
A KYF A G LG+LY+ G+GV N +A ++ KA + + + LG +Y
Sbjct: 246 AFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMY 305
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVE 158
YSG G+ ++ A +Y+ A L +Y G V R + AVE
Sbjct: 306 YSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVE 356
Score = 47.8 bits (112), Expect = 1e-04
Identities = 28/95 (29%), Positives = 46/95 (47%), Gaps = 4/95 (4%)
Query: 32 LVGLGAKSYKEK----DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASF 87
L GLG + K ++ +A KYF+KA + F LG +YY G G+ K+ K A +
Sbjct: 262 LHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKY 321
Query: 88 YAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQ 122
+ A + L +Y +G GV ++ A++
Sbjct: 322 FYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVE 356
>gb|AAC37164.1| (L05770) putative regulatory protein PobS [Acinetobacter sp. ADP1]
Length = 392
Score = 73.9 bits (180), Expect = 2e-12
Identities = 43/156 (27%), Positives = 73/156 (46%), Gaps = 4/156 (2%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
+F + K ++ C +N L +Y G V +N+ A +Y K N G L
Sbjct: 220 NFKRTLKQAQEGCIKAQNQ----LASMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNL 275
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
G LY +G G+ +N L + K+ Y + +L +Y G +V +D ++A+ ++ KA
Sbjct: 276 GKLYLNGLGIEKNYELGLTWIKKSVKQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKA 335
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKA 199
+L LG +++ G+G DLK A Y +A
Sbjct: 336 ANLRHATSAYRLGQIFELGQGVTLDLKLAKRFYHQA 371
Score = 72.0 bits (175), Expect = 7e-12
Identities = 39/133 (29%), Positives = 69/133 (51%)
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
L ++Y +G V+QN + AL +Y K EG +LG +Y +G + ++++ + + K
Sbjct: 239 LASMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELGLTWIKK 298
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
+ N D L LY+ G KD+++AL Y KA +L+ + + G ++ G+G T
Sbjct: 299 SVKQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKAANLRHATSAYRLGQIFELGQGVT 358
Query: 223 KNFKEALARYSKA 235
+ K A Y +A
Sbjct: 359 LDLKLAKRFYHQA 371
Score = 65.9 bits (159), Expect = 5e-10
Identities = 64/225 (28%), Positives = 94/225 (41%), Gaps = 22/225 (9%)
Query: 77 VEKNLKKAASFYAKAC---DLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYA 133
+EK+L + A+A L Y G ++ + Y + Q + N + LK A
Sbjct: 172 IEKSLSFYHHYLARALLVEVLQYHLGFDIIDSDYNTSQSLIINCEDIPNFKRT---LKQA 228
Query: 134 -EGCAS----LGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKD 188
EGC L +Y +G VT++ A+ ++ K ND +G LG LY G G K+
Sbjct: 229 QEGCIKAQNQLASMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKN 288
Query: 189 LKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLG 248
+ L K+ F +Y G K+ ++AL Y KA L + + LG
Sbjct: 289 YELGLTWIKKSVKQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKAANLRHATSAYRLG 348
Query: 249 AMQYNGEGVTRNEK-------QAIENFKKGCKLGAKGACDILKQL 286
+ G+GVT + K QA NF AK DIL QL
Sbjct: 349 QIFELGQGVTLDLKLAKRFYHQAASNFSS----EAKNRLDILDQL 389
Score = 51.6 bits (122), Expect = 1e-05
Identities = 31/108 (28%), Positives = 57/108 (52%), Gaps = 6/108 (5%)
Query: 25 AEQDPKELVGLGAKSYK-----EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEK 79
++ DP+ + LG K Y EK++ + +K+ F L LY +G V+K
Sbjct: 265 SQNDPEGELNLG-KLYLNGLGIEKNYELGLTWIKKSVKQNYPDAYFTLAELYEKGHIVQK 323
Query: 80 NLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKA 127
++++A FY KA +L ++ + LG ++ GQGV+ + A ++Y +A
Sbjct: 324 DIQQALIFYKKAANLRHATSAYRLGQIFELGQGVTLDLKLAKRFYHQA 371
>ref|NP_274346.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||B81095 conserved hypothetical protein NMB1327 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41702.1| (AE002481) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 467
Score = 73.2 bits (178), Expect = 3e-12
Identities = 62/252 (24%), Positives = 108/252 (42%), Gaps = 30/252 (11%)
Query: 47 QAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL 106
+A +F++A + L +Y QG+ +E+N K A A + G +LG++
Sbjct: 226 EAVHWFQQAAQENDPDAHAALADIYLQGKHLERNHKLALHHAEAAAAERHPEGLRILGDI 285
Query: 107 YYSGQGVSQNTNKALQYYSKACDLKYAEGCASL------------GGIYHDGKVVTRDFK 154
G G++ +T KA YY +A + L GGI + R +
Sbjct: 286 CRYGLGIAPDTEKARHYYRQAAEAGSLSAYQKLISDSALNHPDQYGGI--KDSAIRR--Q 341
Query: 155 KAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNM 214
+A + KA L+ G C + AL Y +A +L S N G+M
Sbjct: 342 RAERLYQKAQALHYGLQCA-------------PEYAAALKLYTEAAELGHSKAQTNLGSM 388
Query: 215 YHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL 274
Y+ G+G T ++ EA + KA ++ +NL + Y+G GV ++++A ++
Sbjct: 389 YYFGQGMTADYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVEPDKEKACRYLQEAINN 448
Query: 275 GAKGACDILKQL 286
G G +L++L
Sbjct: 449 G-YGQKSVLQEL 459
Score = 61.6 bits (148), Expect = 1e-08
Identities = 60/258 (23%), Positives = 100/258 (38%), Gaps = 36/258 (13%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
DF A + K+ + LG+ Y GQG + + +A + A Y L
Sbjct: 156 DFETAHLLYRKSAAQGLPEAHWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPL 215
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
L + ++A+ ++ +A + A+L IY GK + R+ K A+ + A
Sbjct: 216 AELI-----LPTAPDEAVHWFQQAAQENDPDAHAALADIYLQGKHLERNHKLALHHAEAA 270
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACD---------------------- 201
+G ILG + G G D +KA Y +A +
Sbjct: 271 AAERHPEGLRILGDICRYGLGIAPDTEKARHYYRQAAEAGSLSAYQKLISDSALNHPDQY 330
Query: 202 --LKDS-------PGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQY 252
+KDS + H+G + AL Y++A EL + NLG+M Y
Sbjct: 331 GGIKDSAIRRQRAERLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYY 390
Query: 253 NGEGVTRNEKQAIENFKK 270
G+G+T + +A + F+K
Sbjct: 391 FGQGMTADYNEARKWFEK 408
Score = 52.0 bits (123), Expect = 8e-06
Identities = 27/91 (29%), Positives = 47/91 (50%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
++ A K + +A +L + NLG +YY GQG+ + +A ++ KA S + L
Sbjct: 362 EYAAALKLYTEAAELGHSKAQTNLGSMYYFGQGMTADYNEARKWFEKAAAKKDSMAFYNL 421
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAE 134
++YSG GV + KA +Y +A + Y +
Sbjct: 422 ACIHYSGHGVEPDKEKACRYLQEAINNGYGQ 452
>ref|NP_459434.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL19393.1| (AE008716) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 427
Score = 72.4 bits (176), Expect = 5e-12
Identities = 66/259 (25%), Positives = 112/259 (42%), Gaps = 45/259 (17%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACD-LNYSN---- 98
D QA KY+E+ACDL + GCFN Y G G +K++ +A + + + +N SN
Sbjct: 2 DIPQAIKYYEQACDLDGDYGCFNAAYFYEYGIGTQKDITQAKTLAKQLREKINLSNINLD 61
Query: 99 ---GCHLLGNLYYSG--------------QGVS------QNTNKALQ------------- 122
++G++Y + QG+S Q+ + L
Sbjct: 62 KKVSERIIGSVYSNKLEAYRDLSFRPHFIQGLSFYFYAPQSDERKLLSRIGFDSSHLARI 121
Query: 123 --YYSKACDLKYAEGCASL-GGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLY 179
+++ D + A A L +Y + + T D +A+++ + + D D T+LG LY
Sbjct: 122 AILWAREGDPEVAYQTAKLVSTLYFNNETKTIDIAEALKWLRISAEKGDADSQTLLGFLY 181
Query: 180 D-AGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACEL 238
+ AG G D +KA Y+ A + + G MY+ G ++ +AL + KA E
Sbjct: 182 EHAGLGLQPDGEKARKWYEMAAQQGNGEALYTLGRMYYSGVLVNVDYDKALYFFKKAYEK 241
Query: 239 ENGGGCFNLGAMQYNGEGV 257
+ L M +NG+ V
Sbjct: 242 KLQEAADYLAQMYFNGQSV 260
Score = 54.7 bits (130), Expect = 1e-06
Identities = 34/121 (28%), Positives = 60/121 (49%), Gaps = 1/121 (0%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLY-YQGQGVEKNLKKAASFYAKACDLNYSNG 99
K D +A K+ + + + LG LY + G G++ + +KA +Y A
Sbjct: 151 KTIDIAEALKWLRISAEKGDADSQTLLGFLYEHAGLGLQPDGEKARKWYEMAAQQGNGEA 210
Query: 100 CHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEY 159
+ LG +YYSG V+ + +KAL ++ KA + K E L +Y +G+ V D +++ Y
Sbjct: 211 LYTLGRMYYSGVLVNVDYDKALYFFKKAYEKKLQEAADYLAQMYFNGQSVDVDCQQSWHY 270
Query: 160 F 160
+
Sbjct: 271 Y 271
Score = 49.3 bits (116), Expect = 5e-05
Identities = 28/97 (28%), Positives = 44/97 (44%), Gaps = 4/97 (4%)
Query: 31 ELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAK 90
E GLG + EK A+K++E A + LG +YY G V + KA F+ K
Sbjct: 182 EHAGLGLQPDGEK----ARKWYEMAAQQGNGEALYTLGRMYYSGVLVNVDYDKALYFFKK 237
Query: 91 ACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKA 127
A + L +Y++GQ V + ++ YY +
Sbjct: 238 AYEKKLQEAADYLAQMYFNGQSVDVDCQQSWHYYDNS 274
Score = 42.0 bits (97), Expect = 0.008
Identities = 31/135 (22%), Positives = 62/135 (44%), Gaps = 1/135 (0%)
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIY-HDGKVVTRDFKKAVEYF 160
L+ LY++ + + + +AL++ + + A+ LG +Y H G + D +KA +++
Sbjct: 140 LVSTLYFNNETKTIDIAEALKWLRISAEKGDADSQTLLGFLYEHAGLGLQPDGEKARKWY 199
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEG 220
A +G+ LG +Y +G D KAL + KA + K MY +G+
Sbjct: 200 EMAAQQGNGEALYTLGRMYYSGVLVNVDYDKALYFFKKAYEKKLQEAADYLAQMYFNGQS 259
Query: 221 ATKNFKEALARYSKA 235
+ +++ Y +
Sbjct: 260 VDVDCQQSWHYYDNS 274
>gb|EAA00460.1| (AAAB01008986) agCP9334 [Anopheles gambiae str. PEST]
Length = 228
Score = 72.4 bits (176), Expect = 5e-12
Identities = 55/190 (28%), Positives = 85/190 (43%), Gaps = 25/190 (13%)
Query: 39 SYKEKDFTQAKKYFEKACDLKENSGCFNLG---VLYYQG---QGVEKNLKKAASFYAKAC 92
S+ K+ T+ K+Y +K ++ GC++ V + G +G+ K+ +KAA Y C
Sbjct: 23 SFDLKNETEVKEYIDKL-GVEYRFGCYSEKKPEVCHLLGDYLEGIRKDFEKAAKVYRSNC 81
Query: 93 D-LNYSNGCHLLGNLYYSGQGVSQNTN---KALQYYSKACDLKYAEGCASLGGIYHDG-- 146
D NY C GN + G+G + KA YY K C L + C G +
Sbjct: 82 DDYNYGKSCLKYGNYTFLGKGRTSEKGDPAKAYAYYEKGCALNDPDACLHSGLLLVSKLM 141
Query: 147 -KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDA-----------GRGTPKDLKKALA 194
K +TRD K E K+C++N+ C L +Y + G GT +D KKA
Sbjct: 142 PKEITRDVPKGFELLKKSCEMNNAGACFYLSGMYISGVLKEDQMYAKGDGTARDEKKAEK 201
Query: 195 SYDKACDLKD 204
A +++D
Sbjct: 202 YKKLALEMQD 211
Score = 65.5 bits (158), Expect = 7e-10
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 30/182 (16%)
Query: 115 QNTNKALQYYSKACDLKYAEGCAS--------LGGIYHDGKVVTRDFKKAVEYFTKACD- 165
+N + +Y K ++Y GC S L G Y +G + +DF+KA + + CD
Sbjct: 27 KNETEVKEYIDKL-GVEYRFGCYSEKKPEVCHLLGDYLEG--IRKDFEKAAKVYRSNCDD 83
Query: 166 LNDGDGCTILGSLYDAGRGTPK---DLKKALASYDKACDLKDSPGCFNAGNMYHHG---E 219
N G C G+ G+G D KA A Y+K C L D C ++G + +
Sbjct: 84 YNYGKSCLKYGNYTFLGKGRTSEKGDPAKAYAYYEKGCALNDPDACLHSGLLLVSKLMPK 143
Query: 220 GATKNFKEALARYSKACELENGGGCFNLGAMQYN-----------GEGVTRNEKQAIENF 268
T++ + K+CE+ N G CF L M + G+G R+EK+A E +
Sbjct: 144 EITRDVPKGFELLKKSCEMNNAGACFYLSGMYISGVLKEDQMYAKGDGTARDEKKA-EKY 202
Query: 269 KK 270
KK
Sbjct: 203 KK 204
Score = 50.1 bits (118), Expect = 3e-05
Identities = 40/142 (28%), Positives = 57/142 (39%), Gaps = 10/142 (7%)
Query: 154 KKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACD-LKDSPGCFNAG 212
K VEY + C +LG + G KD +KA Y CD C G
Sbjct: 38 KLGVEYRFGCYSEKKPEVCHLLGDYLE---GIRKDFEKAAKVYRSNCDDYNYGKSCLKYG 94
Query: 213 NMYHHGEGATKNFKE---ALARYSKACELENGGGCFNLGAMQYNG---EGVTRNEKQAIE 266
N G+G T + A A Y K C L + C + G + + + +TR+ + E
Sbjct: 95 NYTFLGKGRTSEKGDPAKAYAYYEKGCALNDPDACLHSGLLLVSKLMPKEITRDVPKGFE 154
Query: 267 NFKKGCKLGAKGACDILKQLKI 288
KK C++ GAC L + I
Sbjct: 155 LLKKSCEMNNAGACFYLSGMYI 176
Score = 43.1 bits (100), Expect = 0.004
Identities = 28/112 (25%), Positives = 50/112 (44%), Gaps = 15/112 (13%)
Query: 35 LGAKSYKEK-DFTQAKKYFEKACDLKENSGCFNLGVLY---YQGQGVEKNLKKAASFYAK 90
LG EK D +A Y+EK C L + C + G+L + + +++ K K
Sbjct: 99 LGKGRTSEKGDPAKAYAYYEKGCALNDPDACLHSGLLLVSKLMPKEITRDVPKGFELLKK 158
Query: 91 ACDLNYSNGCHLLGNLYYS-----------GQGVSQNTNKALQYYSKACDLK 131
+C++N + C L +Y S G G +++ KA +Y A +++
Sbjct: 159 SCEMNNAGACFYLSGMYISGVLKEDQMYAKGDGTARDEKKAEKYKKLALEMQ 210
>ref|NP_496487.1| (NM_064086) ZK20.4.p [Caenorhabditis elegans]
pir||T27773 hypothetical protein ZK20.4 - Caenorhabditis elegans
emb|CAA93779.1| (Z69904) cDNA EST yk428d5.3 comes from this gene~cDNA EST yk428d5.5
comes from this gene~cDNA EST yk537a3.3 comes from this
gene~cDNA EST yk621h11.3 comes from this gene~cDNA EST
yk537a3.5 comes from this gene~cDNA EST yk621h11.5 comes
from this gene [>
Length = 249
Score = 72.0 bits (175), Expect = 7e-12
Identities = 50/189 (26%), Positives = 89/189 (46%), Gaps = 27/189 (14%)
Query: 42 EKDFTQAKKYFEKACDLKENS---GCFNLGVLYYQGQ-GVEKNLKKAASFYAKACDLNYS 97
+++F A F+K CD ENS CF G+ G+ G + +L K ACD N
Sbjct: 51 QQNFQAAVAIFKKNCD--ENSYPKSCFKYGMYMLAGKVGDDASLSKMIRPMKIACDANIP 108
Query: 98 NGCHLLGNLYYSGQGVSQ-NTNKALQYYSKACDLKYAEGCASLGGIYHDGKV-------- 148
GC L ++++G+ + ++ KA +Y +AC+L+ E C L Y K
Sbjct: 109 QGCRYLSLVHWNGEKDRKADSEKAERYMRRACELEDGEACWLLSTWYMGNKEKFKTNAAG 168
Query: 149 ------------VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASY 196
++RD K++++ +AC+++ C + ++ G G PKDL +A
Sbjct: 169 EAKELDRAELGSLSRDMDKSLQFAIRACEMDIPQSCANVSRMFKLGDGVPKDLDQAKKYA 228
Query: 197 DKACDLKDS 205
D+A ++ ++
Sbjct: 229 DRAKEIMET 237
Score = 70.1 bits (170), Expect = 3e-11
Identities = 45/187 (24%), Positives = 83/187 (44%), Gaps = 23/187 (12%)
Query: 75 QGVEKNLKKAASFYAKACDLN-YSNGCHLLGNLYYSGQ-GVSQNTNKALQYYSKACDLKY 132
+ +++N + A + + K CD N Y C G +G+ G + +K ++ ACD
Sbjct: 48 EALQQNFQAAVAIFKKNCDENSYPKSCFKYGMYMLAGKVGDDASLSKMIRPMKIACDANI 107
Query: 133 AEGCASLGGIYHDGKVVTR-DFKKAVEYFTKACDLNDGDGCTILGSLYDAGR-------- 183
+GC L ++ +G+ + D +KA Y +AC+L DG+ C +L + Y +
Sbjct: 108 PQGCRYLSLVHWNGEKDRKADSEKAERYMRRACELEDGEACWLLSTWYMGNKEKFKTNAA 167
Query: 184 ------------GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALAR 231
+D+ K+L +AC++ C N M+ G+G K+ +A
Sbjct: 168 GEAKELDRAELGSLSRDMDKSLQFAIRACEMDIPQSCANVSRMFKLGDGVPKDLDQAKKY 227
Query: 232 YSKACEL 238
+A E+
Sbjct: 228 ADRAKEI 234
>ref|NP_405544.1| (NC_003143) putative exported protein [Yersinia pestis]
emb|CAC90802.1| (AJ414150) putative exported protein [Yersinia pestis]
Length = 720
Score = 71.6 bits (174), Expect = 9e-12
Identities = 43/139 (30%), Positives = 69/139 (48%)
Query: 25 AEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKA 84
++ D LG Y +D+ + K+ EK+ D K F L +Y +G GV+++ K
Sbjct: 563 SQSDDNAQYELGKYHYTCQDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKY 622
Query: 85 ASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYH 144
S+ KA L S+ +G LY G+GV +N +A Q++ KA + +LG IY
Sbjct: 623 FSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQ 682
Query: 145 DGKVVTRDFKKAVEYFTKA 163
+G ++ KA +FT A
Sbjct: 683 NGDGTEKNLDKAKFHFTVA 701
Score = 65.5 bits (158), Expect = 7e-10
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 3/147 (2%)
Query: 141 GIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKAC 200
G YH +D+ + +++ K+ D + +L +Y+ G G +D K + KA
Sbjct: 574 GKYH---YTCQDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYLLKAA 630
Query: 201 DLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRN 260
L S G +Y GEG KN EA + KA E N +NLG + NG+G +N
Sbjct: 631 QLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGDGTEKN 690
Query: 261 EKQAIENFKKGCKLGAKGACDILKQLK 287
+A +F K G + A + LK+L+
Sbjct: 691 LDKAKFHFTVAAKSGMREAYEELKKLE 717
Score = 60.5 bits (145), Expect = 2e-08
Identities = 39/140 (27%), Positives = 66/140 (46%), Gaps = 4/140 (2%)
Query: 98 NGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAV 157
N + LG +Y+ Q+ ++ L++ K+ D K + L +Y++G V D K
Sbjct: 568 NAQYELGKYHYT----CQDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYF 623
Query: 158 EYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHH 217
Y KA L D +G LY G G K+L +A + KA + + +N G +Y +
Sbjct: 624 SYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQN 683
Query: 218 GEGATKNFKEALARYSKACE 237
G+G KN +A ++ A +
Sbjct: 684 GDGTEKNLDKAKFHFTVAAK 703
>ref|NP_541444.1| (NC_003318) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
gb|AAL53708.1| (AE009683) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
Length = 317
Score = 70.9 bits (172), Expect = 2e-11
Identities = 43/140 (30%), Positives = 71/140 (50%)
Query: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
F +G Y +G+GV +N+K+AA +Y A D ++ + +G+ G G+++N KA +Y
Sbjct: 57 FEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIGSFNEKGLGMARNLEKAKSWY 116
Query: 125 SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 184
A D A +L ++ G T D AV +FT+A +L D LG L G G
Sbjct: 117 QLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLG 176
Query: 185 TPKDLKKALASYDKACDLKD 204
P +L+++ + A + D
Sbjct: 177 MPVNLEESYKWFALAANAGD 196
Score = 54.3 bits (129), Expect = 2e-06
Identities = 33/133 (24%), Positives = 59/133 (43%)
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
+GN Y G+GV++N +A ++Y A D +A +G G + R+ +KA ++
Sbjct: 59 IGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIGSFNEKGLGMARNLEKAKSWYQL 118
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
A D + L L+ G D A+ + +A +L +N G + G G
Sbjct: 119 AADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMP 178
Query: 223 KNFKEALARYSKA 235
N +E+ ++ A
Sbjct: 179 VNLEESYKWFALA 191
Score = 50.8 bits (120), Expect = 2e-05
Identities = 37/160 (23%), Positives = 78/160 (48%), Gaps = 6/160 (3%)
Query: 16 GALCLGGLMAEQDPKELVGLGAKSYKE-----KDFTQAKKYFEKACDLKENSGCFNLGVL 70
G L A+ D + L +G + Y E ++ +A K+++ A D + +G
Sbjct: 40 GPAALREAAAKGDIRALFEIGNR-YMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIGSF 98
Query: 71 YYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL 130
+G G+ +NL+KA S+Y A D ++ H L L+ +G + + A++++++A +L
Sbjct: 99 NEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAAEL 158
Query: 131 KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGD 170
+ +LG + G + + +++ ++F A + D D
Sbjct: 159 GVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAGDKD 198
>ref|NP_103302.1| (NC_002678) unknown protein [Mesorhizobium loti]
dbj|BAB49088.1| (AP002998) unknown protein [Mesorhizobium loti]
Length = 716
Score = 70.9 bits (172), Expect = 2e-11
Identities = 44/175 (25%), Positives = 80/175 (45%)
Query: 45 FTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLG 104
++ A+ ++E A + + ++ N+G + G G E + +A Y +A L +G
Sbjct: 447 YSWAEHFYELAGNQQYSAALINMGYMARVGMGREIDYGRAFDPYVRAAALGNLRARTDIG 506
Query: 105 NLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKAC 164
+ Y +GQGV + + + +Y A +A +LG Y G V +D+ +A ++ A
Sbjct: 507 SAYIAGQGVPKLPEEGVLWYRLAASSGWANAITALGDAYRLGTGVKQDYVQAASLYSAAA 566
Query: 165 DLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGE 219
D D LG Y AG G KD+ + L +A D+ + + +Y G+
Sbjct: 567 DTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQRANDMGNRYAPYFMAQLYLKGD 621
Score = 67.8 bits (164), Expect = 1e-10
Identities = 49/163 (30%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 33 VGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKAC 92
VG+G +E D+ +A + +A L ++G Y GQGV K ++ +Y A
Sbjct: 475 VGMG----REIDYGRAFDPYVRAAALGNLRARTDIGSAYIAGQGVPKLPEEGVLWYRLAA 530
Query: 93 DLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRD 152
++N LG+ Y G GV Q+ +A YS A D + A+LG Y G+ V +D
Sbjct: 531 SSGWANAITALGDAYRLGTGVKQDYVQAASLYSAAADTGQIDAMANLGQAYLAGEGVKKD 590
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAG-RGTPKDLKKALA 194
+ +E +A D+ + + LY G R P D ++ALA
Sbjct: 591 VPRGLELLQRANDMGNRYAPYFMAQLYLKGDRKLPADPRRALA 633
Score = 58.9 bits (141), Expect = 6e-08
Identities = 42/177 (23%), Positives = 82/177 (45%)
Query: 113 VSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGC 172
+++ + A +Y A + +Y+ ++G + G D+ +A + + +A L +
Sbjct: 443 IARRYSWAEHFYELAGNQQYSAALINMGYMARVGMGREIDYGRAFDPYVRAAALGNLRAR 502
Query: 173 TILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARY 232
T +GS Y AG+G PK ++ + Y A + G+ Y G G +++ +A + Y
Sbjct: 503 TDIGSAYIAGQGVPKLPEEGVLWYRLAASSGWANAITALGDAYRLGTGVKQDYVQAASLY 562
Query: 233 SKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDILKQLKIK 289
S A + NLG GEGV ++ + +E ++ +G + A + QL +K
Sbjct: 563 SAAADTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQRANDMGNRYAPYFMAQLYLK 619
Score = 53.5 bits (127), Expect = 3e-06
Identities = 41/172 (23%), Positives = 66/172 (37%)
Query: 84 AASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIY 143
A FY A + YS +G + G G + +A Y +A L +G Y
Sbjct: 450 AEHFYELAGNQQYSAALINMGYMARVGMGREIDYGRAFDPYVRAAALGNLRARTDIGSAY 509
Query: 144 HDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLK 203
G+ V + ++ V ++ A + T LG Y G G +D +A + Y A D
Sbjct: 510 IAGQGVPKLPEEGVLWYRLAASSGWANAITALGDAYRLGTGVKQDYVQAASLYSAAADTG 569
Query: 204 DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGE 255
N G Y GEG K+ L +A ++ N + + + G+
Sbjct: 570 QIDAMANLGQAYLAGEGVKKDVPRGLELLQRANDMGNRYAPYFMAQLYLKGD 621
>ref|NP_596099.1| (NC_003423) very putative chitin synthase regulatory factor
[Schizosaccharomyces pombe]
pir||T40386 hypothetical protein SPBC3E7.12c - fission yeast
(Schizosaccharomyces pombe)
emb|CAA19015.1| (AL023534) very putative chitin synthase regulatory factor
[Schizosaccharomyces pombe]
Length = 456
Score = 67.0 bits (162), Expect = 2e-10
Identities = 52/182 (28%), Positives = 85/182 (46%), Gaps = 8/182 (4%)
Query: 31 ELVGLGAKSYKEKDFTQAKKYFEKACD---LKENSGCFNLGVLYYQGQGVEKNLKKAASF 87
+++ L K+ K+ + A ++ E ++N + L LY Q +G ++LK
Sbjct: 260 QILDLAIKAKKDGNLENAIEFLEYIMPEVASQQNFVPYELAELYKQ-RGTSQDLKSILPL 318
Query: 88 YAKACDLNYSNGCHLLGNLYYSGQ-GVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDG 146
Y A L + L+G ++ G G +N +ALQYY A D A+ +L +Y G
Sbjct: 319 YMLAASLGHDRSSFLVGEAFFYGTYGARENKLRALQYYHLANDKGNADAMLALCKLYLRG 378
Query: 147 KV--VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 204
+ ++A EY +A L C +LG Y+ G G KDL K+ A + +A + D
Sbjct: 379 LPGHIFPSSRRAFEYAHRAAMLGHAPACYVLGKFYETGVGCVKDLAKSEAGF-RAGLIND 437
Query: 205 SP 206
SP
Sbjct: 438 SP 439
>ref|XP_003620.2| (XM_003620) similar to hypothetical protein DKFZp761O0113 [Homo
sapiens]
Length = 347
Score = 66.6 bits (161), Expect = 3e-10
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 30/267 (11%)
Query: 36 GAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN 95
G ++E + +A + FE+ + K++ + LGV+YY G G + +K + K D
Sbjct: 66 GQLYFEEGWYEEALEQFEEIKE-KDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSP 124
Query: 96 YSNGCHL-------LGNLYYSGQGVSQNTNKALQYYSKACD---LKYAEGCASLGGIYHD 145
HL LG YY G+GV ++ +A + + A D K + S+ G+Y+
Sbjct: 125 CPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYS 184
Query: 146 GKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS 205
K ++ +KA + ++AC + + LG +Y G+G +D + AL +A + +
Sbjct: 185 TK-EPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNV 243
Query: 206 PGCFNAGNMYHHGEGATK--NFKEALARYSKA-----------CELENGGGCFNLGAMQY 252
N Y+ + TK F + +A Y + C E G + + +
Sbjct: 244 YAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFIGRGMAMASFYH 303
Query: 253 N-----GEGVTRNEKQAIENFKKGCKL 274
G G+TR+E A + K C+L
Sbjct: 304 ARCLQLGLGITRDETTAKHYYSKACRL 330
>ref|NP_518145.1| (NC_003295) PUTATIVE SIGNAL PEPTIDE PROTEIN [Ralstonia
solanacearum]
emb|CAD13552.1| (AL646057) PUTATIVE SIGNAL PEPTIDE PROTEIN [Ralstonia solanacearum]
Length = 252
Score = 66.6 bits (161), Expect = 3e-10
Identities = 46/185 (24%), Positives = 84/185 (44%), Gaps = 3/185 (1%)
Query: 25 AEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKA 84
A+ D L + Y+ +F +A F +A FN ++ +G+G + A
Sbjct: 41 AQGDAAALTQIAIAHYEHNEFGRAIDEFAEAAQRGNRLAQFNYAMMLMRGEGTVAQPEAA 100
Query: 85 ASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYH 144
+ +A D ++ G L+ G+ V ++ +A ++Y +A + E +L Y
Sbjct: 101 VKWLRRAADNQMTHAQFAYGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYF 160
Query: 145 DGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG--TPKDLKKALASYDKACDL 202
G+ V RD+ +A ++ KA + DG I+GS Y+ G +D+++A Y +A
Sbjct: 161 TGRGVPRDYGRAFTWYKKAAEAGDGPSQYIVGSYYERGEPGVVAQDIEQAKLWYGRAAAQ 220
Query: 203 KDSPG 207
D PG
Sbjct: 221 GD-PG 224
>dbj|BAA92563.1| (AB037746) KIAA1325 protein [Homo sapiens]
Length = 354
Score = 66.6 bits (161), Expect = 3e-10
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 30/267 (11%)
Query: 36 GAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN 95
G ++E + +A + FE+ + K++ + LGV+YY G G + +K + K D
Sbjct: 73 GQLYFEEGWYEEALEQFEEIKE-KDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSP 131
Query: 96 YSNGCHL-------LGNLYYSGQGVSQNTNKALQYYSKACD---LKYAEGCASLGGIYHD 145
HL LG YY G+GV ++ +A + + A D K + S+ G+Y+
Sbjct: 132 CPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYS 191
Query: 146 GKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS 205
K ++ +KA + ++AC + + LG +Y G+G +D + AL +A + +
Sbjct: 192 TK-EPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNV 250
Query: 206 PGCFNAGNMYHHGEGATK--NFKEALARYSKA-----------CELENGGGCFNLGAMQY 252
N Y+ + TK F + +A Y + C E G + + +
Sbjct: 251 YAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFIGRGMAMASFYH 310
Query: 253 N-----GEGVTRNEKQAIENFKKGCKL 274
G G+TR+E A + K C+L
Sbjct: 311 ARCLQLGLGITRDETTAKHYYSKACRL 337
>ref|NP_060879.1| (NM_018409) hypothetical protein DKFZp761O0113 [Homo sapiens]
pir||T47138 hypothetical protein DKFZp761O0113.1 - human
emb|CAB82313.1| (AL161975) hypothetical protein [Homo sapiens]
Length = 321
Score = 66.6 bits (161), Expect = 3e-10
Identities = 65/267 (24%), Positives = 116/267 (43%), Gaps = 30/267 (11%)
Query: 36 GAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN 95
G ++E + +A + FE+ + K++ + LGV+YY G G + +K + K D
Sbjct: 40 GQLYFEEGWYEEALEQFEEIKE-KDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSP 98
Query: 96 YSNGCHL-------LGNLYYSGQGVSQNTNKALQYYSKACD---LKYAEGCASLGGIYHD 145
HL LG YY G+GV ++ +A + + A D K + S+ G+Y+
Sbjct: 99 CPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYS 158
Query: 146 GKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS 205
K ++ +KA + ++AC + + LG +Y G+G +D + AL +A + +
Sbjct: 159 TK-EPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNV 217
Query: 206 PGCFNAGNMYHHGEGATK--NFKEALARYSKA-----------CELENGGGCFNLGAMQY 252
N Y+ + TK F + +A Y + C E G + + +
Sbjct: 218 YAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFIGRGMAMASFYH 277
Query: 253 N-----GEGVTRNEKQAIENFKKGCKL 274
G G+TR+E A + K C+L
Sbjct: 278 ARCLQLGLGITRDETTAKHYYSKACRL 304
>ref|NP_245305.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK02452.1| (AE006073) unknown [Pasteurella multocida]
Length = 242
Score = 66.6 bits (161), Expect = 3e-10
Identities = 41/138 (29%), Positives = 64/138 (45%), Gaps = 3/138 (2%)
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
LG LY GQGV Q+ KA ++S+A + + +L Y G V +D + ++ F K
Sbjct: 94 LGILYARGQGVPQDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIRHSITLFEK 153
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
+ D +LG +Y+ + +A Y KA + + F MY +GEG
Sbjct: 154 TANSGSLDAMLVLGQIYE---NELNQMTQAFKWYKKAAEAGNHDAQFRLAVMYENGEGTK 210
Query: 223 KNFKEALARYSKACELEN 240
KN K+A+ Y K +N
Sbjct: 211 KNKKQAVYWYQKVSVQQN 228
Score = 65.1 bits (157), Expect = 9e-10
Identities = 39/134 (29%), Positives = 63/134 (46%), Gaps = 3/134 (2%)
Query: 137 ASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASY 196
A+LG +Y G+ V +DF+KA +F++A + L Y G G +D++ ++ +
Sbjct: 92 ANLGILYARGQGVPQDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIRHSITLF 151
Query: 197 DKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEG 256
+K + G +Y E +A Y KA E N F L M NGEG
Sbjct: 152 EKTANSGSLDAMLVLGQIY---ENELNQMTQAFKWYKKAAEAGNHDAQFRLAVMYENGEG 208
Query: 257 VTRNEKQAIENFKK 270
+N+KQA+ ++K
Sbjct: 209 TKKNKKQAVYWYQK 222
Score = 63.9 bits (154), Expect = 2e-09
Identities = 37/133 (27%), Positives = 66/133 (48%), Gaps = 3/133 (2%)
Query: 66 NLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYS 125
NLG+LY +GQGV ++ +KA ++++A + + L Y G GV Q+ ++ +
Sbjct: 93 NLGILYARGQGVPQDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIRHSITLFE 152
Query: 126 KACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGT 185
K + + LG IY + +A +++ KA + + D L +Y+ G GT
Sbjct: 153 KTANSGSLDAMLVLGQIYEN---ELNQMTQAFKWYKKAAEAGNHDAQFRLAVMYENGEGT 209
Query: 186 PKDLKKALASYDK 198
K+ K+A+ Y K
Sbjct: 210 KKNKKQAVYWYQK 222
Score = 48.9 bits (115), Expect = 6e-05
Identities = 28/120 (23%), Positives = 59/120 (48%), Gaps = 3/120 (2%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+DF +A +F +A + NL V Y QG GV+++++ + + + K + + +
Sbjct: 106 QDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIRHSITLFEKTANSGSLDAMLV 165
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
LG +Y + +A ++Y KA + + L +Y +G+ ++ K+AV ++ K
Sbjct: 166 LGQIY---ENELNQMTQAFKWYKKAAEAGNHDAQFRLAVMYENGEGTKKNKKQAVYWYQK 222
>ref|NP_460954.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL20913.1| (AE008788) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 564
Score = 66.2 bits (160), Expect = 4e-10
Identities = 45/146 (30%), Positives = 68/146 (45%), Gaps = 2/146 (1%)
Query: 143 YHDGKVVTR--DFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKAC 200
YH GK ++ A+++ T++ + N L Y+ G G +D KK L+ KA
Sbjct: 414 YHLGKYEFECTNYDAAMKWLTQSAEQNHPGALLFLAYAYNDGDGVAQDSKKYLSYLFKAA 473
Query: 201 DLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRN 260
+L +S G + GEG KN EA K+ + N +NLG M NG+GV ++
Sbjct: 474 ELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGDGVEKD 533
Query: 261 EKQAIENFKKGCKLGAKGACDILKQL 286
+A + K G K A LK+L
Sbjct: 534 LNKAKLHLTAAVKGGVKPALAALKEL 559
Score = 60.8 bits (146), Expect = 2e-08
Identities = 33/113 (29%), Positives = 58/113 (51%)
Query: 116 NTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTIL 175
N + A+++ +++ + + L Y+DG V +D KK + Y KA +L + D +
Sbjct: 425 NYDAAMKWLTQSAEQNHPGALLFLAYAYNDGDGVAQDSKKYLSYLFKAAELGESDAQLEV 484
Query: 176 GSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEA 228
G L G G PK+L +A K+ D ++ +N G MY +G+G K+ +A
Sbjct: 485 GYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGDGVEKDLNKA 537
Score = 55.8 bits (133), Expect = 5e-07
Identities = 35/129 (27%), Positives = 62/129 (47%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
LG ++ ++ A K+ ++ + L Y G GV ++ KK S+ KA +L
Sbjct: 416 LGKYEFECTNYDAAMKWLTQSAEQNHPGALLFLAYAYNDGDGVAQDSKKYLSYLFKAAEL 475
Query: 95 NYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFK 154
S+ +G L G+G+ +N +A ++ K+ D A+ +LG +Y +G V +D
Sbjct: 476 GESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGDGVEKDLN 535
Query: 155 KAVEYFTKA 163
KA + T A
Sbjct: 536 KAKLHLTAA 544
Score = 51.2 bits (121), Expect = 1e-05
Identities = 30/113 (26%), Positives = 53/113 (46%)
Query: 80 NLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASL 139
N A + ++ + N+ L Y G GV+Q++ K L Y KA +L ++ +
Sbjct: 425 NYDAAMKWLTQSAEQNHPGALLFLAYAYNDGDGVAQDSKKYLSYLFKAAELGESDAQLEV 484
Query: 140 GGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKA 192
G + G+ + ++ +A ++ K+ D + LG +Y G G KDL KA
Sbjct: 485 GYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGDGVEKDLNKA 537
>ref|NP_661851.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM72193.1| (AE012860) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 248
Score = 65.1 bits (157), Expect = 9e-10
Identities = 43/187 (22%), Positives = 87/187 (45%)
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
+L+ YY G+ V ++ +AL++ + ++G +Y G V +D+ +A++++
Sbjct: 51 YLIAMKYYYGRDVDRDYAEALKWLRLSAAKGNDAAEYAIGFMYQKGLGVPQDYAEAMKWY 110
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEG 220
A ++ + +G LY G G D +A+ Y + + N G +Y HG+G
Sbjct: 111 RLAAAKDNDNAQNQIGYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDNIGVLYEHGQG 170
Query: 221 ATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGAC 280
+++ EA+ Y + NG N+G +G GV + +A++ ++ G + A
Sbjct: 171 VEQDYAEAMRWYRISAAKGNGEAELNIGNFYQHGLGVELDLNKAVKWYRSAAAKGNEEAA 230
Query: 281 DILKQLK 287
L +K
Sbjct: 231 QKLSAMK 237
Score = 55.8 bits (133), Expect = 5e-07
Identities = 33/121 (27%), Positives = 58/121 (47%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+D+ +A K++ A ++ +G LY+ G GVE + +A +Y +
Sbjct: 101 QDYAEAMKWYRLAAAKDNDNAQNQIGYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDN 160
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
+G LY GQGV Q+ +A+++Y + E ++G Y G V D KAV+++
Sbjct: 161 IGVLYEHGQGVEQDYAEAMRWYRISAAKGNGEAELNIGNFYQHGLGVELDLNKAVKWYRS 220
Query: 163 A 163
A
Sbjct: 221 A 221
>dbj|BAB22100.1| (AK002437) data source:SPTR, source key:Q14154,
evidence:ISS~homolog to HYPOTHETICAL PROTEIN
KIAA0141~putative [Mus musculus]
Length = 510
Score = 64.7 bits (156), Expect = 1e-09
Identities = 48/174 (27%), Positives = 77/174 (43%), Gaps = 4/174 (2%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
LG ++ K D+T A YF+KA D + +N+G+ G+G ++L KA FY A
Sbjct: 252 LGTENIKTGDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAILFYHLAAVQ 311
Query: 95 NYSNGCHLLGN--LYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRD 152
+S + L G +A+ +A D E A LG ++ K D
Sbjct: 312 GHSLAQYRYARCLLQSPGSLSDPERERAVSLLKQAADSGLTEAQAFLGVLF--TKEPHLD 369
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSP 206
++AV+Y A D LG Y+ G G ++L +A+ Y +A + + P
Sbjct: 370 EQRAVKYLWLAASNGDSQSRFHLGICYEKGLGAQRNLGEAVKCYQQAAAMGNEP 423
>gb|AAG30966.1|AC012396_2 (AC012396) hypothetical protein, 3' partial [Arabidopsis thaliana]
Length = 392
Score = 63.9 bits (154), Expect = 2e-09
Identities = 32/99 (32%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
Query: 31 ELVGLG---AKSY--KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAA 85
E GLG K Y ++++T+A++YFE A + ++ SG +NLGVLY +G GV+K+++ A
Sbjct: 275 EFNGLGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHAT 334
Query: 86 SFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
++ A + + L ++++G G+++N A +Y
Sbjct: 335 KYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFY 373
Score = 62.0 bits (149), Expect = 7e-09
Identities = 46/139 (33%), Positives = 64/139 (45%), Gaps = 9/139 (6%)
Query: 101 HLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVT-RDFKKAVE 158
H +G YY G +G+ ++ KAL ++SKA LG +Y G V R++ KA E
Sbjct: 247 HKIGLFYYFGLRGLRRDHAKALYWFSKA-------EFNGLGYLYVKGYGVDKRNYTKARE 299
Query: 159 YFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHG 218
YF A + D G LG LY G G KD++ A + A + + M+H G
Sbjct: 300 YFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQLAKMFHTG 359
Query: 219 EGATKNFKEALARYSKACE 237
G TKN + A Y E
Sbjct: 360 VGLTKNLEMATTFYKLVAE 378
Score = 52.4 bits (124), Expect = 6e-06
Identities = 35/119 (29%), Positives = 60/119 (50%), Gaps = 8/119 (6%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEK-NLKKAASFYAKACDLNYSNGCH 101
+D +A +F KA E +G LG LY +G GV+K N KA ++ A + +G +
Sbjct: 262 RDHAKALYWFSKA----EFNG---LGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHY 314
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
LG LY G GV ++ A +Y+ A + + L ++H G +T++ + A ++
Sbjct: 315 NLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFY 373
Score = 49.3 bits (116), Expect = 5e-05
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 9/133 (6%)
Query: 139 LGGIYHDG-KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPK-DLKKALASY 196
+G Y+ G + + RD KA+ +F+KA + N LG LY G G K + KA +
Sbjct: 249 IGLFYYFGLRGLRRDHAKALYWFSKA-EFNG------LGYLYVKGYGVDKRNYTKAREYF 301
Query: 197 DKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEG 256
+ A + +D G +N G +Y G G K+ + A + A + L M + G G
Sbjct: 302 EMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQLAKMFHTGVG 361
Query: 257 VTRNEKQAIENFK 269
+T+N + A +K
Sbjct: 362 LTKNLEMATTFYK 374
>ref|NP_283034.1| (NC_003116) hypothetical protein NMA0184 [Neisseria meningitidis
Z2491]
pir||F82012 hypothetical protein NMA0184 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB83499.1| (AL162752) hypothetical protein NMA0184 [Neisseria meningitidis
Z2491]
Length = 468
Score = 62.8 bits (151), Expect = 4e-09
Identities = 45/162 (27%), Positives = 72/162 (43%), Gaps = 5/162 (3%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGC 100
++ D A + +EKA L + C+ LG +Y+ G GV N +A + A +
Sbjct: 145 RQGDVETAIEQYEKAAALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQ 204
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
LL +L +Q +AL++Y +A D + AE + L G++ RD +A Y
Sbjct: 205 TLLADLL-----AAQRKPEALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYA 259
Query: 161 TKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
A + + + I+G LY G G D A Y +A L
Sbjct: 260 KAAAEKDHPEALKIMGDLYRYGLGIKADNHIAHDYYHRAAAL 301
Score = 58.9 bits (141), Expect = 6e-08
Identities = 46/214 (21%), Positives = 86/214 (39%), Gaps = 11/214 (5%)
Query: 47 QAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL 106
+A +++ +A D ++ L G+ E++ +AA + A + ++ ++G+L
Sbjct: 218 EALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYAKAAAEKDHPEALKIMGDL 277
Query: 107 YYSGQGVSQNTNKALQYYSKACDLKYAEGCASL---GGIYHDGKVVTRDFKKAVEYFTKA 163
Y G G+ + + A YY +A L A L +YH ++ + T A
Sbjct: 278 YRYGLGIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHP--------QQYEQIKTAA 329
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATK 223
+ L G P D A +Y +A G +YH+G G +
Sbjct: 330 LQQQQTETIYRLAEAQACAIGRPADYNAARKNYMEAAGFHHKNAAAALGRIYHYGLGTAQ 389
Query: 224 NFKEALARYSKACELENGGGCFNLGAMQYNGEGV 257
+ + A Y+ A E + ++L Y+G+GV
Sbjct: 390 DPRAAAHWYAIAAEQNHPSAQYHLACFYYHGQGV 423
Score = 44.7 bits (104), Expect = 0.001
Identities = 24/84 (28%), Positives = 41/84 (48%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
D+ A+K + +A + LG +Y+ G G ++ + AA +YA A + N+ + + L
Sbjct: 354 DYNAARKNYMEAAGFHHKNAAAALGRIYHYGLGTAQDPRAAAHWYAIAAEQNHPSAQYHL 413
Query: 104 GNLYYSGQGVSQNTNKALQYYSKA 127
YY GQGV + A + A
Sbjct: 414 ACFYYHGQGVGCHVPTACYWLQAA 437
>gb|AAH30908.1| (BC030908) Unknown (protein for IMAGE:4504268) [Mus musculus]
Length = 292
Score = 61.6 bits (148), Expect = 1e-08
Identities = 60/267 (22%), Positives = 113/267 (41%), Gaps = 30/267 (11%)
Query: 36 GAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN 95
G ++E + +A FE+ + K++ + LGV+YY G G N +K ++ K D +
Sbjct: 11 GQLYFEEGWYEEALAQFEEIQE-KDHQAIYQLGVMYYDGLGTIANAEKGVNYMRKILDSS 69
Query: 96 YSNGCHL-------LGNLYYSGQGVSQNTNKALQYYSKACD---LKYAEGCASLGGIYHD 145
HL LG Y+ G+GV ++ +A + + A D K + S+ G+++
Sbjct: 70 CPQTMHLKFAAAYNLGRAYFEGKGVKRSDEEAERLWLLAADNGNPKASVKAQSILGLFYS 129
Query: 146 GKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS 205
K ++ +KA + ++AC + LG +Y G+G +D AL +A + +
Sbjct: 130 MK-EPKELEKAFFWHSEACGNGSLESQGALGLMYFYGQGIRQDTDAALHCLREAAERGNV 188
Query: 206 PGCFNAGNMYHHGEGATK--NFKEALARYSKACELE----------------NGGGCFNL 247
Y+ + TK +F + +A Y + ++ F
Sbjct: 189 YAQGTLVEYYYKMKFFTKCVSFSKRIADYDEVHDIPMIAHVTDCLPEFIIKGMAMAAFYH 248
Query: 248 GAMQYNGEGVTRNEKQAIENFKKGCKL 274
G G G+ ++E+ A + K C+L
Sbjct: 249 GRCLQLGLGIMKDEESAKHYYSKACRL 275
>ref|XP_134130.1| (XM_134130) similar to Ank repeat containing protein~data
source:Pfam, source key:PF00023, evidence:ISS~putative
[Mus musculus]
Length = 367
Score = 61.6 bits (148), Expect = 1e-08
Identities = 60/267 (22%), Positives = 113/267 (41%), Gaps = 30/267 (11%)
Query: 36 GAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN 95
G ++E + +A FE+ + K++ + LGV+YY G G N +K ++ K D +
Sbjct: 86 GQLYFEEGWYEEALAQFEEIQE-KDHQAIYQLGVMYYDGLGTIANAEKGVNYMRKILDSS 144
Query: 96 YSNGCHL-------LGNLYYSGQGVSQNTNKALQYYSKACD---LKYAEGCASLGGIYHD 145
HL LG Y+ G+GV ++ +A + + A D K + S+ G+++
Sbjct: 145 CPQTMHLKFAAAYNLGRAYFEGKGVKRSDEEAERLWLLAADNGNPKASVKAQSILGLFYS 204
Query: 146 GKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS 205
K ++ +KA + ++AC + LG +Y G+G +D AL +A + +
Sbjct: 205 MK-EPKELEKAFFWHSEACGNGSLESQGALGLMYFYGQGIRQDTDAALHCLREAAERGNV 263
Query: 206 PGCFNAGNMYHHGEGATK--NFKEALARYSKACELE----------------NGGGCFNL 247
Y+ + TK +F + +A Y + ++ F
Sbjct: 264 YAQGTLVEYYYKMKFFTKCVSFSKRIADYDEVHDIPMIAHVTDCLPEFIIKGMAMAAFYH 323
Query: 248 GAMQYNGEGVTRNEKQAIENFKKGCKL 274
G G G+ ++E+ A + K C+L
Sbjct: 324 GRCLQLGLGIMKDEESAKHYYSKACRL 350
>ref|NP_080554.1| (NM_026278) RIKEN cDNA 2310006J04 [Mus musculus]
dbj|BAB30345.1| (AK016626) Ank repeat containing protein~data source:Pfam, source
key:PF00023, evidence:ISS~putative [Mus musculus]
Length = 346
Score = 61.6 bits (148), Expect = 1e-08
Identities = 60/267 (22%), Positives = 113/267 (41%), Gaps = 30/267 (11%)
Query: 36 GAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN 95
G ++E + +A FE+ + K++ + LGV+YY G G N +K ++ K D +
Sbjct: 65 GQLYFEEGWYEEALAQFEEIQE-KDHQAIYQLGVMYYDGLGTIANAEKGVNYMRKILDSS 123
Query: 96 YSNGCHL-------LGNLYYSGQGVSQNTNKALQYYSKACD---LKYAEGCASLGGIYHD 145
HL LG Y+ G+GV ++ +A + + A D K + S+ G+++
Sbjct: 124 CPQTMHLKFAAAYNLGRAYFEGKGVKRSDEEAERLWLLAADNGNPKASVKAQSILGLFYS 183
Query: 146 GKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS 205
K ++ +KA + ++AC + LG +Y G+G +D AL +A + +
Sbjct: 184 MK-EPKELEKAFFWHSEACGNGSLESQGALGLMYFYGQGIRQDTDAALHCLREAAERGNV 242
Query: 206 PGCFNAGNMYHHGEGATK--NFKEALARYSKACELE----------------NGGGCFNL 247
Y+ + TK +F + +A Y + ++ F
Sbjct: 243 YAQGTLVEYYYKMKFFTKCVSFSKRIADYDEVHDIPMIAHVTDCLPEFIIKGMAMAAFYH 302
Query: 248 GAMQYNGEGVTRNEKQAIENFKKGCKL 274
G G G+ ++E+ A + K C+L
Sbjct: 303 GRCLQLGLGIMKDEESAKHYYSKACRL 329
>gb|AAL47061.1|AF326613_1 (AF326613) JHP318-like protein [Helicobacter pylori]
Length = 46
Score = 60.5 bits (145), Expect = 2e-08
Identities = 28/45 (62%), Positives = 31/45 (68%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEK 79
+G KS + KD+ QAKKYFEKAC L GC L VLY GQGVEK
Sbjct: 1 MGVKSSEAKDYIQAKKYFEKACGLNNGGGCGALAVLYINGQGVEK 45
>gb|AAH11926.1|AAH11926 (BC011926) Similar to KIAA0141 gene product [Homo sapiens]
Length = 515
Score = 59.7 bits (143), Expect = 4e-08
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
LG ++ K D T A YF+KA + +N G+ + G+G +++ KA +Y A
Sbjct: 251 LGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQ 310
Query: 95 NYSNGCHLLGNLYYSGQGVSQN--TNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRD 152
+S + S N +A+ +A D E A LG ++ K D
Sbjct: 311 GHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLF--TKEPYLD 368
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
++AV+Y A + D LG Y+ G G ++L +AL Y ++ L
Sbjct: 369 EQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAAL 418
>ref|NP_531202.1| (NC_003304) conserved hypothetical protein [Agrobacterium tumefaciens
str. C58 (U. Washington)]
gb|AAL41518.1| (AE009019) conserved hypothetical protein [Agrobacterium tumefaciens
str. C58 (U. Washington)]
Length = 1248
Score = 59.7 bits (143), Expect = 4e-08
Identities = 36/133 (27%), Positives = 60/133 (45%)
Query: 60 ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNK 119
+ F + Y G+GV + +AA +Y A D + + L NLY GV +N +
Sbjct: 983 DTQALFEIAARYTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVE 1042
Query: 120 ALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLY 179
A +YY+ A + A +L + DF + ++F KA +L D L LY
Sbjct: 1043 AKRYYTLAAEQGNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILY 1102
Query: 180 DAGRGTPKDLKKA 192
G G +D++++
Sbjct: 1103 ARGSGVKQDIEES 1115
Score = 58.9 bits (141), Expect = 6e-08
Identities = 61/232 (26%), Positives = 105/232 (44%), Gaps = 14/232 (6%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
D +A K+++ A D + L LY + GVE+NL +A +Y A + + H L
Sbjct: 1003 DRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTLAAEQGNAGAMHNL 1062
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
L S + + Q++ KA +L + +L +Y G V +D +++ ++F A
Sbjct: 1063 AVLLASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILYARGSGVKQDIEESYKWFAIA 1122
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYD--KACDLKDSPGCFNAGNMYHHGEG- 220
D D + AG +P+ L+ A A D K L D N + EG
Sbjct: 1123 AKDGDADAAQKRDEV--AGAMSPQQLQSAKAKVDAWKVKPLSDDANSVNPPEEWAGKEGV 1180
Query: 221 --ATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 270
A+ + ++A+ R +A +NG F+ G Q +G+ + +N AI +F+K
Sbjct: 1181 KTASVDMEKAI-RNIQAILNKNG---FDAG--QPDGK-LGKNTVTAIRDFQK 1225
Score = 44.7 bits (104), Expect = 0.001
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 4/135 (2%)
Query: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
Y DG+ VT D +A +++ A D L +LY+ G ++L +A Y A +
Sbjct: 994 YTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTLAAEQ 1053
Query: 203 KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEK 262
++ N + +F + + KA EL FNL + G GV K
Sbjct: 1054 GNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILYARGSGV----K 1109
Query: 263 QAIENFKKGCKLGAK 277
Q IE K + AK
Sbjct: 1110 QDIEESYKWFAIAAK 1124
Score = 44.3 bits (103), Expect = 0.002
Identities = 30/131 (22%), Positives = 54/131 (40%)
Query: 107 YYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 166
Y G+GV+ + +A ++Y A D A L +Y V R+ +A Y+T A +
Sbjct: 994 YTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTLAAEQ 1053
Query: 167 NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFK 226
+ L L + D + + KA +L FN +Y G G ++ +
Sbjct: 1054 GNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILYARGSGVKQDIE 1113
Query: 227 EALARYSKACE 237
E+ ++ A +
Sbjct: 1114 ESYKWFAIAAK 1124
Score = 43.9 bits (102), Expect = 0.002
Identities = 27/103 (26%), Positives = 42/103 (40%)
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
+ + Y GRG D +A Y A D +P + N+Y G +N EA Y+
Sbjct: 990 IAARYTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTL 1049
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAK 277
A E N G NL + + + + + F K +LG +
Sbjct: 1050 AAEQGNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVR 1092
>ref|NP_055588.1| (NM_014773) KIAA0141 gene product [Homo sapiens]
sp|Q14154|Y141_HUMAN Hypothetical protein KIAA0141
dbj|BAA09490.1| (D50931) The KIAA0141 gene product is novel. [Homo sapiens]
Length = 515
Score = 59.7 bits (143), Expect = 4e-08
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
LG ++ K D T A YF+KA + +N G+ + G+G +++ KA +Y A
Sbjct: 251 LGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQ 310
Query: 95 NYSNGCHLLGNLYYSGQGVSQN--TNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRD 152
+S + S N +A+ +A D E A LG ++ K D
Sbjct: 311 GHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLF--TKEPYLD 368
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
++AV+Y A + D LG Y+ G G ++L +AL Y ++ L
Sbjct: 369 EQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAAL 418
>ref|NP_353527.1| (NC_003062) AGR_C_883p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK86312.1| (AE007985) AGR_C_883p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 1214
Score = 59.7 bits (143), Expect = 4e-08
Identities = 36/133 (27%), Positives = 60/133 (45%)
Query: 60 ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNK 119
+ F + Y G+GV + +AA +Y A D + + L NLY GV +N +
Sbjct: 949 DTQALFEIAARYTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVE 1008
Query: 120 ALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLY 179
A +YY+ A + A +L + DF + ++F KA +L D L LY
Sbjct: 1009 AKRYYTLAAEQGNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILY 1068
Query: 180 DAGRGTPKDLKKA 192
G G +D++++
Sbjct: 1069 ARGSGVKQDIEES 1081
Score = 58.9 bits (141), Expect = 6e-08
Identities = 61/232 (26%), Positives = 105/232 (44%), Gaps = 14/232 (6%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
D +A K+++ A D + L LY + GVE+NL +A +Y A + + H L
Sbjct: 969 DRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTLAAEQGNAGAMHNL 1028
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
L S + + Q++ KA +L + +L +Y G V +D +++ ++F A
Sbjct: 1029 AVLLASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILYARGSGVKQDIEESYKWFAIA 1088
Query: 164 CDLNDGDGCTILGSLYDAGRGTPKDLKKALASYD--KACDLKDSPGCFNAGNMYHHGEG- 220
D D + AG +P+ L+ A A D K L D N + EG
Sbjct: 1089 AKDGDADAAQKRDEV--AGAMSPQQLQSAKAKVDAWKVKPLSDDANSVNPPEEWAGKEGV 1146
Query: 221 --ATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 270
A+ + ++A+ R +A +NG F+ G Q +G+ + +N AI +F+K
Sbjct: 1147 KTASVDMEKAI-RNIQAILNKNG---FDAG--QPDGK-LGKNTVTAIRDFQK 1191
Score = 44.7 bits (104), Expect = 0.001
Identities = 36/135 (26%), Positives = 55/135 (40%), Gaps = 4/135 (2%)
Query: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
Y DG+ VT D +A +++ A D L +LY+ G ++L +A Y A +
Sbjct: 960 YTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTLAAEQ 1019
Query: 203 KDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEK 262
++ N + +F + + KA EL FNL + G GV K
Sbjct: 1020 GNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILYARGSGV----K 1075
Query: 263 QAIENFKKGCKLGAK 277
Q IE K + AK
Sbjct: 1076 QDIEESYKWFAIAAK 1090
Score = 44.3 bits (103), Expect = 0.002
Identities = 30/131 (22%), Positives = 54/131 (40%)
Query: 107 YYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 166
Y G+GV+ + +A ++Y A D A L +Y V R+ +A Y+T A +
Sbjct: 960 YTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTLAAEQ 1019
Query: 167 NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFK 226
+ L L + D + + KA +L FN +Y G G ++ +
Sbjct: 1020 GNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILYARGSGVKQDIE 1079
Query: 227 EALARYSKACE 237
E+ ++ A +
Sbjct: 1080 ESYKWFAIAAK 1090
Score = 43.9 bits (102), Expect = 0.002
Identities = 27/103 (26%), Positives = 42/103 (40%)
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
+ + Y GRG D +A Y A D +P + N+Y G +N EA Y+
Sbjct: 956 IAARYTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTL 1015
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAK 277
A E N G NL + + + + + F K +LG +
Sbjct: 1016 AAEQGNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVR 1058
>gb|AAH07855.1|AAH07855 (BC007855) KIAA0141 gene product [Homo sapiens]
gb|AAH10452.1|AAH10452 (BC010452) KIAA0141 gene product [Homo sapiens]
gb|AAH11269.1|AAH11269 (BC011269) KIAA0141 gene product [Homo sapiens]
Length = 515
Score = 59.7 bits (143), Expect = 4e-08
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 4/170 (2%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
LG ++ K D T A YF+KA + +N G+ + G+G +++ KA +Y A
Sbjct: 251 LGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQ 310
Query: 95 NYSNGCHLLGNLYYSGQGVSQN--TNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRD 152
+S + S N +A+ +A D E A LG ++ K D
Sbjct: 311 GHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLF--TKEPYLD 368
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
++AV+Y A + D LG Y+ G G ++L +AL Y ++ L
Sbjct: 369 EQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAAL 418
>ref|NP_106249.1| (NC_002678) unknown protein [Mesorhizobium loti]
dbj|BAB52035.1| (AP003007) unknown protein [Mesorhizobium loti]
Length = 1360
Score = 58.9 bits (141), Expect = 6e-08
Identities = 34/128 (26%), Positives = 65/128 (50%)
Query: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
F +G Y + +GV++++ AA +Y K+ +L ++ + +GN Y G GV+++ K+ +Y
Sbjct: 1101 FEIGSRYAESRGVKEDMAAAAKWYEKSAELGFAPAEYRIGNFYEKGIGVARDIKKSKTWY 1160
Query: 125 SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 184
A + A +L ++ D + A +F +A DL D LG L G G
Sbjct: 1161 QLAAEQGNASAMHNLAVLFAMAADGVTDNESAAHWFQEAADLGVKDSQFNLGILAAKGVG 1220
Query: 185 TPKDLKKA 192
++L+++
Sbjct: 1221 MKQNLEES 1228
Score = 57.8 bits (138), Expect = 1e-07
Identities = 67/276 (24%), Positives = 120/276 (43%), Gaps = 20/276 (7%)
Query: 16 GALCLGGLMAEQDPKELVGLGAKSYKEK----DFTQAKKYFEKACDLKENSGCFNLGVLY 71
G L A D K L +G++ + + D A K++EK+ +L + +G Y
Sbjct: 1084 GPAALRDAAAGGDAKALFEIGSRYAESRGVKEDMAAAAKWYEKSAELGFAPAEYRIGNFY 1143
Query: 72 YQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLY-YSGQGVSQNTNKALQYYSKACDL 130
+G GV +++KK+ ++Y A + ++ H L L+ + GV+ N A ++ +A DL
Sbjct: 1144 EKGIGVARDIKKSKTWYQLAAEQGNASAMHNLAVLFAMAADGVTDN-ESAAHWFQEAADL 1202
Query: 131 KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLK 190
+ +LG + G + ++ +++ ++F D D + +A R P+ L+
Sbjct: 1203 GVKDSQFNLGILAAKGVGMKQNLEESYKWFALVAKTGDKDAAAKRDEIANALR--PEQLE 1260
Query: 191 KALASYD--KACDLKDSPGCFNAGNMYHHGE---GATKNFKEALARYSKACELENGGGCF 245
+A A+ + KA L + + + G A + K+A+ + N G
Sbjct: 1261 RARAATELWKAKPLNAATNSADIPESWQEGTPQMTAGIDMKKAVKNIQL---ILNKNGYD 1317
Query: 246 NLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
GA GE K AI F+ KL A GA D
Sbjct: 1318 AGGADGVMGE----KTKNAIIAFQTDNKLPATGAVD 1349
>ref|NP_473246.1| (NC_000521) predicted using hexExon; MAL3P4.5 (PFC0550w),
Hypothetical protein, len: 808 aa [Plasmodium
falciparum]
pir||T18454 hypothetical protein C0550w - malaria parasite (Plasmodium
falciparum)
emb|CAA15596.1| (AL008970) hypothetical protein, PFC0550w [Plasmodium falciparum
3D7]
Length = 807
Score = 58.5 bits (140), Expect = 8e-08
Identities = 48/174 (27%), Positives = 73/174 (41%), Gaps = 6/174 (3%)
Query: 28 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASF 87
D + LG K +EK+F QA KY +A LG++Y G GV+K++ K+
Sbjct: 450 DVMAMYDLGKKYKEEKNFKQAFKYINEASKKNNLLALKELGIIYLYGYGVQKDINKSIEN 509
Query: 88 YAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHD-- 145
++KA + LG +YY G +N +L+Y +A Y E L I D
Sbjct: 510 FSKAAEAGDVESKCYLGYIYYFIDGY-KNLELSLKYLIEAASHDYGEAFFFLAEIILDIS 568
Query: 146 -GKVVTRDFKKAVEY--FTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASY 196
K D+ V + + + DL LY+ G+G + A SY
Sbjct: 569 MRKQYISDYVYEVVFKLYEHSADLGYVQAYFREAQLYEIGKGVKQSCLNATLSY 622
Score = 45.1 bits (105), Expect = 0.001
Identities = 45/191 (23%), Positives = 84/191 (43%), Gaps = 12/191 (6%)
Query: 57 DLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQN 116
++K+N C+ LY + V +N+ + +L+ NG +L N++ + N
Sbjct: 382 NMKQN--CYKAKKLY---KNVAENVMNSDYINIPLSELDLLNGENL--NMHNEINNMKNN 434
Query: 117 TNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILG 176
+ L++ ++ LG Y + K +FK+A +Y +A N+ LG
Sbjct: 435 EEEILEFLNEQIKGGDVMAMYDLGKKYKEEK----NFKQAFKYINEASKKNNLLALKELG 490
Query: 177 SLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKAC 236
+Y G G KD+ K++ ++ KA + D G +Y+ +G KN + +L +A
Sbjct: 491 IIYLYGYGVQKDINKSIENFSKAAEAGDVESKCYLGYIYYFIDG-YKNLELSLKYLIEAA 549
Query: 237 ELENGGGCFNL 247
+ G F L
Sbjct: 550 SHDYGEAFFFL 560
>ref|NP_249051.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||F83599 hypothetical protein PA0360 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG03749.1|AE004474_1 (AE004474) hypothetical protein [Pseudomonas aeruginosa]
Length = 328
Score = 58.5 bits (140), Expect = 8e-08
Identities = 47/194 (24%), Positives = 85/194 (43%), Gaps = 16/194 (8%)
Query: 28 DPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASF 87
+P+ L GA Y+++++ A++++ KA L +LY G G ++ +AA +
Sbjct: 60 EPQALFDFGAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQDKTEAARW 119
Query: 88 YAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGK 147
+ KA + + + +G LY+ G+GV Q+ KA ++ +A + +LG Y D
Sbjct: 120 FRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDAETNLGWFYLDDS 179
Query: 148 ----VVTRD------------FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKK 191
T D +KA ++F KA D +G Y G G + +
Sbjct: 180 QGVYSATSDEEAALLDRYAGSREKAFQWFCKAATQGDARAQFKVGEAYWNGSGAGMNKLQ 239
Query: 192 ALASYDKACDLKDS 205
A +KA +D+
Sbjct: 240 ARLWLEKAAQQQDA 253
Score = 45.1 bits (105), Expect = 0.001
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 16/166 (9%)
Query: 115 QNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTI 174
QN A +++ KA L +Y DG +D +A +F KA + D
Sbjct: 75 QNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQDKTEAARWFRKAAEQGDAAAQNE 134
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACD--------------LKDSPGCFNAGNMYHHG-- 218
+G LY G G +D KA +++A L DS G ++A +
Sbjct: 135 MGVLYWRGEGVDQDRVKAGTWFERAAASGSEDAETNLGWFYLDDSQGVYSATSDEEAALL 194
Query: 219 EGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQA 264
+ + ++A + KA + F +G +NG G N+ QA
Sbjct: 195 DRYAGSREKAFQWFCKAATQGDARAQFKVGEAYWNGSGAGMNKLQA 240
>dbj|BAA19847.1| (AB003310) chitin synthase regulatory factor [Candida albicans]
Length = 687
Score = 58.2 bits (139), Expect = 1e-07
Identities = 52/207 (25%), Positives = 90/207 (43%), Gaps = 12/207 (5%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQ----GVEKNLKKAA-SFYAKACDLNY- 96
+D +A ++ + A + + LGV + G+ + N KK + +A ++
Sbjct: 428 RDSRKAVEFLKIAASRNHPAAMYKLGVYSFYGRMGLPANDMNTKKMGIKWLTRAANVATE 487
Query: 97 --SNGCHLLGNLYYSG--QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRD 152
+ + LG LYY+G V + L+ +++A L + + A LG Y G++V +D
Sbjct: 488 LTAAAPYELGKLYYNGFEDIVLIDKKYGLELFAQAAALGHLQSAAILGHHYEIGEIVPQD 547
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGT--PKDLKKALASYDKACDLKDSPGCFN 210
++ Y+T+A D + + + Y G PKD +A +A + F
Sbjct: 548 SNLSIHYYTQAALGGDPNSMLAMCAWYLVGSEPYLPKDDNEAFEWAKRAANCNLPKAQFA 607
Query: 211 AGNMYHHGEGATKNFKEALARYSKACE 237
N Y G G KN EA + Y KA E
Sbjct: 608 LANFYEKGIGCIKNINEAQSWYKKAAE 634
>ref|NP_455035.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD08897.1| (AL627266) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 384
Score = 57.4 bits (137), Expect = 2e-07
Identities = 39/131 (29%), Positives = 66/131 (49%), Gaps = 4/131 (3%)
Query: 65 FNLGVLYYQGQGVEKNLKKAAS--FYAKACDLNYSNGCHLLGNLYYSGQ-GVSQNTNKAL 121
F +G LY G VE + K+A S ++ KA +L ++ ++LG Y +G+ G+ ++ K
Sbjct: 96 FIVGSLYDSGF-VEVDDKEARSLQWFRKAAELGQADAQNILGYFYLNGKRGIKRDLQKGG 154
Query: 122 QYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDA 181
Q+Y A + +LG IY+ G V D+ +A E+F +A + L +Y
Sbjct: 155 QWYELAAAQGNVDALINLGEIYYSGTRVPLDYARAFEFFERAAKMGKSRALNYLAWMYTN 214
Query: 182 GRGTPKDLKKA 192
G+ D +KA
Sbjct: 215 GQFVDTDCRKA 225
Score = 56.6 bits (135), Expect = 3e-07
Identities = 48/175 (27%), Positives = 76/175 (43%), Gaps = 11/175 (6%)
Query: 108 YSGQGVSQNTNKALQYYSKACDLKYAEGCAS---------LGGIYHDGKVVTRDFK-KAV 157
Y+G G + YSKA L AE A +G +Y G V D + +++
Sbjct: 58 YAGGGSAMAARITRLGYSKADILHLAELWAQERDPELNFIVGSLYDSGFVEVDDKEARSL 117
Query: 158 EYFTKACDLNDGDGCTILGSLYDAG-RGTPKDLKKALASYDKACDLKDSPGCFNAGNMYH 216
++F KA +L D ILG Y G RG +DL+K Y+ A + N G +Y+
Sbjct: 118 QWFRKAAELGQADAQNILGYFYLNGKRGIKRDLQKGGQWYELAAAQGNVDALINLGEIYY 177
Query: 217 HGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKG 271
G ++ A + +A ++ L M NG+ V + ++A E F +G
Sbjct: 178 SGTRVPLDYARAFEFFERAAKMGKSRALNYLAWMYTNGQFVDTDCRKAAELFAQG 232
Score = 43.9 bits (102), Expect = 0.002
Identities = 25/106 (23%), Positives = 50/106 (46%), Gaps = 3/106 (2%)
Query: 24 MAEQDPKELVG---LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKN 80
+ + D + ++G L K ++D + +++E A NLG +YY G V +
Sbjct: 126 LGQADAQNILGYFYLNGKRGIKRDLQKGGQWYELAAAQGNVDALINLGEIYYSGTRVPLD 185
Query: 81 LKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSK 126
+A F+ +A + S + L +Y +GQ V + KA + +++
Sbjct: 186 YARAFEFFERAAKMGKSRALNYLAWMYTNGQFVDTDCRKAAELFAQ 231
Score = 42.0 bits (97), Expect = 0.008
Identities = 32/112 (28%), Positives = 54/112 (47%), Gaps = 2/112 (1%)
Query: 174 ILGSLYDAGRGTPKDLK-KALASYDKACDLKDSPGCFNAGNMYHHGE-GATKNFKEALAR 231
I+GSLYD+G D + ++L + KA +L + G Y +G+ G ++ ++
Sbjct: 97 IVGSLYDSGFVEVDDKEARSLQWFRKAAELGQADAQNILGYFYLNGKRGIKRDLQKGGQW 156
Query: 232 YSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACDIL 283
Y A N NLG + Y+G V + +A E F++ K+G A + L
Sbjct: 157 YELAAAQGNVDALINLGEIYYSGTRVPLDYARAFEFFERAAKMGKSRALNYL 208
>ref|XP_130572.1| (XM_130572) similar to dJ842G6.2 (novel protein imilar to SEL1L
(sel-1 (suppressor of lin-12, C.elegans)-like)) [Mus
musculus]
Length = 273
Score = 57.0 bits (136), Expect = 2e-07
Identities = 46/193 (23%), Positives = 85/193 (43%), Gaps = 3/193 (1%)
Query: 70 LYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 129
+YY G GV K+ K A ++ A + L +Y +G GV ++ A++ Y C+
Sbjct: 1 MYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCE 60
Query: 130 L-KYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKD 188
L +AE + Y DG + + + A+ ++ + IL S G K
Sbjct: 61 LGHWAEKFLTAYFAYKDGDIDSSLIQYAL-LAEMGYEVAQSNSAFILESKKAKILGKEKL 119
Query: 189 LKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGG-GCFNL 247
AL +++A ++ G+ +++G G K+++ A YS A + + FNL
Sbjct: 120 YPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYETAATHYSIAADKHHSAQAMFNL 179
Query: 248 GAMQYNGEGVTRN 260
M +G G+ ++
Sbjct: 180 AYMYEHGLGIAKD 192
Score = 51.2 bits (121), Expect = 1e-05
Identities = 47/200 (23%), Positives = 78/200 (38%), Gaps = 9/200 (4%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
KD+ A KYF A + + L +Y G GV ++ + A Y C+L + L
Sbjct: 10 KDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGHWAEKFL 69
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHD--GKVVTRD--FKKAVE 158
Y + + +L Y+ ++ Y ++ I K++ ++ + A+
Sbjct: 70 TAYFAYKDGDI----DSSLIQYALLAEMGYEVAQSNSAFILESKKAKILGKEKLYPMALL 125
Query: 159 YFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDS-PGCFNAGNMYHH 217
+ +A + +G + G GT KD + A Y A D S FN MY H
Sbjct: 126 LWNRAAIQGNAFARVKIGDYHYYGYGTKKDYETAATHYSIAADKHHSAQAMFNLAYMYEH 185
Query: 218 GEGATKNFKEALARYSKACE 237
G G K+ A Y A +
Sbjct: 186 GLGIAKDIHLARRLYDMAAQ 205
>ref|NP_459433.1| (NC_003197) putative periplasmic protein [Salmonella typhimurium
LT2]
gb|AAL19392.1| (AE008715) putative periplasmic protein [Salmonella typhimurium
LT2]
Length = 503
Score = 57.0 bits (136), Expect = 2e-07
Identities = 69/284 (24%), Positives = 115/284 (40%), Gaps = 59/284 (20%)
Query: 47 QAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN----------- 95
+A +Y+++AC+L N GC+N+ Y G GV K+ +A YAK +L+
Sbjct: 72 RALQYYKQACELGGNYGCYNVKYAYQYGDGVAKDSAQANK-YAKKMNLDNLLIEQEYIDK 130
Query: 96 ----------------------YSNGCHLLGN------LYYSGQGVSQN-TNKALQYYSK 126
S H L N L++S G +Q T + +S+
Sbjct: 131 FSQEIYMAKALADTDKSQRAAFISILIHALNNRPESDALFFSRIGFNQEKTFRLATLWSQ 190
Query: 127 ACD--LKYAEGCASLG---GIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDA 181
D + Y G +L G Y D R ++++F A + + ++LG +Y
Sbjct: 191 DGDPQMDYQMGRLTLNDFSGRYADEPYQARP--ASLKWFRAAAEKGVVEAQSLLGGIYSG 248
Query: 182 GR----GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE 237
G G D+++A Y +A DS G +Y+ G ++ +ALA ++ +
Sbjct: 249 GEGDEWGIKPDIQEAQKWYGQAAKQGDSDAQIALGKIYYSGATGRTDYAKALALFT---Q 305
Query: 238 LENGG----GCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAK 277
+EN G L M YNG G + +A +KK + K
Sbjct: 306 VENDGTNSRSTMPLSWMYYNGLGTAPDCDKAWSYYKKASRYVGK 349
Score = 48.5 bits (114), Expect = 8e-05
Identities = 38/148 (25%), Positives = 67/148 (44%), Gaps = 29/148 (19%)
Query: 93 DLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRD 152
++ + + C L G L+ S S N K D+KYA +T+
Sbjct: 2 EIKFLSLCILAGVLFVSQVNASANNGKD--------DVKYA--------------ALTQK 39
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAG 212
A+ +A L++ LG +++ G P + ++AL Y +AC+L + GC+N
Sbjct: 40 DLDALPVEKRASVLDE------LGFIHEYGLSVPMNRERALQYYKQACELGGNYGCYNVK 93
Query: 213 NMYHHGEGATKNFKEALARYSKACELEN 240
Y +G+G K+ +A +Y+K L+N
Sbjct: 94 YAYQYGDGVAKDSAQA-NKYAKKMNLDN 120
Score = 45.8 bits (107), Expect = 5e-04
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 9/105 (8%)
Query: 102 LLGNLYYSGQG----VSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAV 157
LLG +Y G+G + + +A ++Y +A ++ +LG IY+ G D+ KA+
Sbjct: 241 LLGGIYSGGEGDEWGIKPDIQEAQKWYGQAAKQGDSDAQIALGKIYYSGATGRTDYAKAL 300
Query: 158 EYFTKACDLNDGDGCTI---LGSLYDAGRGTPKDLKKALASYDKA 199
FT+ NDG L +Y G GT D KA + Y KA
Sbjct: 301 ALFTQV--ENDGTNSRSTMPLSWMYYNGLGTAPDCDKAWSYYKKA 343
>ref|NP_102363.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB48149.1| (AP002995) hypothetical protein [Mesorhizobium loti]
Length = 577
Score = 56.6 bits (135), Expect = 3e-07
Identities = 46/192 (23%), Positives = 83/192 (42%), Gaps = 3/192 (1%)
Query: 21 GGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKN 80
G A+ D L+ GA + D +FE A + FNLG+ + +G GV ++
Sbjct: 347 GNQQAQTDLANLILGGAG--EPDDGASVAGWFEAAASSGDLIAAFNLGLCFAKGVGVRQD 404
Query: 81 LKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLG 140
+AA + +A + + ++ L G+GV+ + +A ++++A D + +L
Sbjct: 405 EGQAAHWLRRAAE-GVAEAQYMYARLLQDGRGVAADPTQARVWFARAADAGVLDARVALA 463
Query: 141 GIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKAC 200
+ +G+ + + A++ F +A +G+LY AG G P D A Y A
Sbjct: 464 EMLLNGRGGMPEPEAAMQLFEQAAADGHAGAMFAIGALYGAGHGLPLDQTTAQKWYAAAA 523
Query: 201 DLKDSPGCFNAG 212
S F G
Sbjct: 524 GRGHSQAQFMLG 535
Score = 50.1 bits (118), Expect = 3e-05
Identities = 47/237 (19%), Positives = 88/237 (36%), Gaps = 3/237 (1%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+D A + ++ A + S F LG+ G V +++ ++ +A +L
Sbjct: 225 RDMAAAAQLYQAAAEKGLPSAQFRLGLALIDGALVGQDVAAGEAWMRRAALAGNIEAAYL 284
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
LG+ + Q + +A +Y +A + + +L +Y G V D ++ +
Sbjct: 285 LGDRHAKTQ--RPDFAEAANWYRRAAEAGHQAAARALASLYLTGNGVAEDVEEGARWLRS 342
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
+ + T L +L G G P D ++ A D FN G + G G
Sbjct: 343 SASAGNQQAQTDLANLILGGAGEPDDGASVAGWFEAAASSGDLIAAFNLGLCFAKGVGVR 402
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGA 279
++ +A +A E + + +G GV + QA F + G A
Sbjct: 403 QDEGQAAHWLRRAAE-GVAEAQYMYARLLQDGRGVAADPTQARVWFARAADAGVLDA 458
Score = 47.4 bits (111), Expect = 2e-04
Identities = 52/256 (20%), Positives = 86/256 (33%), Gaps = 35/256 (13%)
Query: 43 KDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHL 102
+D A +++EK+ GC L +G +N + A +A D +L
Sbjct: 154 RDADAAHRWYEKSASAGCAEGCLGFA-LSLARRGKRENRVRIAEEVRRAADAGLPTATYL 212
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTR----------- 151
L L G GV+++ A Q Y A + LG DG +V +
Sbjct: 213 LAVLTEHGLGVARDMAAAAQLYQAAAEKGLPSAQFRLGLALIDGALVGQDVAAGEAWMRR 272
Query: 152 -----------------------DFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKD 188
DF +A ++ +A + L SLY G G +D
Sbjct: 273 AALAGNIEAAYLLGDRHAKTQRPDFAEAANWYRRAAEAGHQAAARALASLYLTGNGVAED 332
Query: 189 LKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLG 248
+++ + + + N+ G G + + A + FNLG
Sbjct: 333 VEEGARWLRSSASAGNQQAQTDLANLILGGAGEPDDGASVAGWFEAAASSGDLIAAFNLG 392
Query: 249 AMQYNGEGVTRNEKQA 264
G GV ++E QA
Sbjct: 393 LCFAKGVGVRQDEGQA 408
Score = 44.7 bits (104), Expect = 0.001
Identities = 60/287 (20%), Positives = 99/287 (33%), Gaps = 54/287 (18%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
DF +A ++ +A + + L LY G GV +++++ A + + L
Sbjct: 296 DFAEAANWYRRAAEAGHQAAARALASLYLTGNGVAEDVEEGARWLRSSASAGNQQAQTDL 355
Query: 104 GNL------------------------------------YYSGQGVSQNTNKALQYYSKA 127
NL + G GV Q+ +A + +A
Sbjct: 356 ANLILGGAGEPDDGASVAGWFEAAASSGDLIAAFNLGLCFAKGVGVRQDEGQAAHWLRRA 415
Query: 128 CDLKYAEGCASLGGIY----HDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR 183
AEG A +Y DG+ V D +A +F +A D D L + GR
Sbjct: 416 -----AEGVAEAQYMYARLLQDGRGVAADPTQARVWFARAADAGVLDARVALAEMLLNGR 470
Query: 184 GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGG 243
G + + A+ +++A + F G +Y G G + A Y+ A +
Sbjct: 471 GGMPEPEAAMQLFEQAAADGHAGAMFAIGALYGAGHGLPLDQTTAQKWYAAAAGRGHSQA 530
Query: 244 CFNLGAMQYNGEGVTRN--------EKQAIENFKKGC-KLGAKGACD 281
F LG G R+ E+ A + +LGA G D
Sbjct: 531 QFMLGRYLLKGLAGERDPVAARLWLERAAAHGISEAADELGAAGGSD 577
Score = 44.3 bits (103), Expect = 0.002
Identities = 44/216 (20%), Positives = 78/216 (35%), Gaps = 20/216 (9%)
Query: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
+A AKA + + + Y G GV + + ++ +A D A+ A L +
Sbjct: 31 EAFPLMAKAARAGIVDAEYRVARCYLEGAGVPPSRMEGARWLLRAADHGSADAQALLAAL 90
Query: 143 YHDGKVVTR-------------------DFKKAVEYFTKACDLNDGDGCTILGSLYDAGR 183
Y G V + DF A ++ TKA + G ILG + +G
Sbjct: 91 YVTGLVTSEADGKGPSEHLFKPDSAGKPDFTAAFDFATKAAEAGSATGQAILGYILTSGP 150
Query: 184 GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGG 243
+ +D A Y+K+ + GC + G +N +A +
Sbjct: 151 ASMRDADAAHRWYEKSASAGCAEGCLGFA-LSLARRGKRENRVRIAEEVRRAADAGLPTA 209
Query: 244 CFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGA 279
+ L + +G GV R+ A + ++ + G A
Sbjct: 210 TYLLAVLTEHGLGVARDMAAAAQLYQAAAEKGLPSA 245
>ref|NP_435252.1| (NC_003037) hypothetical protein [Sinorhizobium meliloti]
gb|AAK64664.1| (AE007195) hypothetical protein [Sinorhizobium meliloti]
Length = 244
Score = 54.3 bits (129), Expect = 2e-06
Identities = 43/161 (26%), Positives = 74/161 (45%), Gaps = 5/161 (3%)
Query: 34 GLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQG-QGVEKNLKKAASFYAKAC 92
GLG +E A K+ A + + G N L+ QG G + + AA +Y +A
Sbjct: 42 GLGVPENREL----ACKWLRLAAEAGDPVGQRNYAALHMQGLAGTDADYGIAAEYYRRAA 97
Query: 93 DLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRD 152
+ + +L L G+ ++ + +A ++ A + A LG ++H+ V RD
Sbjct: 98 EKGDAPAQDMLSWLLLEGEIMTADPLEARRWAECAAEAGIASSMTRLGMLHHNALGVERD 157
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKAL 193
+KAV ++ KA + D D +LG+ G GT ++ AL
Sbjct: 158 AQKAVYWWLKAAERGDADAQAMLGAACHMGAGTIRNGVTAL 198
Score = 42.4 bits (98), Expect = 0.006
Identities = 37/164 (22%), Positives = 67/164 (40%), Gaps = 1/164 (0%)
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVT-RDFKKAVEYFT 161
+G + G GV +N A ++ A + G + ++ G T D+ A EY+
Sbjct: 35 IGACFAEGLGVPENRELACKWLRLAAEAGDPVGQRNYAALHMQGLAGTDADYGIAAEYYR 94
Query: 162 KACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGA 221
+A + D +L L G D +A + A + + G ++H+ G
Sbjct: 95 RAAEKGDAPAQDMLSWLLLEGEIMTADPLEARRWAECAAEAGIASSMTRLGMLHHNALGV 154
Query: 222 TKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAI 265
++ ++A+ + KA E + LGA + G G RN A+
Sbjct: 155 ERDAQKAVYWWLKAAERGDADAQAMLGAACHMGAGTIRNGVTAL 198
>ref|NP_286374.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_308712.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG54982.1|AE005243_11 (AE005243) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB34108.1| (AP002552) hypothetical protein [Escherichia coli O157:H7]
Length = 184
Score = 54.3 bits (129), Expect = 2e-06
Identities = 27/102 (26%), Positives = 55/102 (53%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGC 100
K D+TQA+ ++E++ + + LG +Y +G GV+ + +KA +Y +A + Y++
Sbjct: 80 KPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQ 139
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
+ LG +Y +G G++ N ++ ++ A Y L G+
Sbjct: 140 YTLGLIYRNGSGINVNHYESQKWLKLAAKQHYKNAERLLAGL 181
Score = 42.4 bits (98), Expect = 0.006
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 65 FNLGVLYYQGQ-GVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQY 123
+ LG Y G G + +A +Y ++ + LG +Y G GV +T KA+ +
Sbjct: 67 YRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILW 126
Query: 124 YSKACDLKYAEGCASLGGIYHDG 146
Y +A + YA +LG IY +G
Sbjct: 127 YKEAAEQGYAHAQYTLGLIYRNG 149
>ref|NP_585979.1| (NC_003234) similarity to HYPOTHETICAL PROTEIN YBET_ECOLI
[Encephalitozoon cuniculi]
emb|CAD25583.1| (AL590447) similarity to HYPOTHETICAL PROTEIN YBET_ECOLI
[Encephalitozoon cuniculi]
Length = 458
Score = 53.9 bits (128), Expect = 2e-06
Identities = 54/225 (24%), Positives = 90/225 (40%), Gaps = 12/225 (5%)
Query: 47 QAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL 106
+A +++ A L +G F + Y +G G ++N++ A FY A L H G +
Sbjct: 181 RAFEHYIIAAQLGSPAGTFRVAQCYEKGIGKKRNMRNALHFYRCAAKLGLVEAMHTYGVI 240
Query: 107 YYSGQGVSQNTNKA-----LQYYSKACDLKYAEGCASLGGIYHDGK---VVTRDFKKAVE 158
G+ V T+ L+ +K Y LG Y GK +++ D A +
Sbjct: 241 ILFGE-VGDGTDLEIGVFYLRLAAKKATHAYPYALYDLGRCYEGGKGPDIISPDDSYAFK 299
Query: 159 YFTKACDLNDGDGCTILGSLYDAGR-GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHH 217
+ K L+ + + +AG G KD+ +A+ Y KA DL S ++ +
Sbjct: 300 LYLKGASLDCPNCQFRVARCLEAGEMGQEKDVARAVEWYAKATDLGQSDAQLRLSVLFLN 359
Query: 218 G--EGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRN 260
G +N+K KA EN + + G GV +N
Sbjct: 360 GLENVVERNYKLGFRLGLKAAARENISAAYLVSDCYEQGVGVKKN 404
Score = 45.8 bits (107), Expect = 5e-04
Identities = 30/97 (30%), Positives = 48/97 (48%), Gaps = 2/97 (2%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQG--QGVEKNLKKAASFYAKACDLNYSN 98
+EKD +A +++ KA DL ++ L VL+ G VE+N K KA +
Sbjct: 327 QEKDVARAVEWYAKATDLGQSDAQLRLSVLFLNGLENVVERNYKLGFRLGLKAAARENIS 386
Query: 99 GCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEG 135
+L+ + Y G GV +NT A + A +L+ A+G
Sbjct: 387 AAYLVSDCYEQGVGVKKNTLLARWWSRIAGELRMAQG 423
>ref|NP_253774.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||A83011 hypothetical protein PA5087 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG08472.1|AE004921_9 (AE004921) hypothetical protein [Pseudomonas aeruginosa]
Length = 289
Score = 53.5 bits (127), Expect = 3e-06
Identities = 56/217 (25%), Positives = 85/217 (38%), Gaps = 22/217 (10%)
Query: 18 LCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGV 77
LCL G+ + K V K + QA ++ +A L + L G+ V
Sbjct: 9 LCLAGVPVMANSKPFVCANEKDHLPPLDPQADAWYREAAALAKPD------TLRPWGRIV 62
Query: 78 EKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG--QGVSQNTNKALQYYSKACDLKYAEG 135
E Y+KA + + H L NLY +G GV ++ KAL Y K DL +G
Sbjct: 63 E--------IYSKAVERGHWKAMHNLANLYRTGWPGGVEKDPQKALDLYQKMIDLDVPQG 114
Query: 136 CASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALAS 195
+G + + V + + KA L + T LG LY K+ + LA
Sbjct: 115 FYDMGAMIGNRAGVKNPATDGLTFLDKAASLGNPPALTELGKLYIY---VAKEKELGLAY 171
Query: 196 YDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARY 232
A +P + G+ Y E N+ +AL+ Y
Sbjct: 172 ASCASSQGYAPASYELGSYY---ELVENNYPKALSYY 205
Score = 43.5 bits (101), Expect = 0.003
Identities = 37/145 (25%), Positives = 58/145 (39%), Gaps = 8/145 (5%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
EKD +A ++K DL G +++G + GV+ +F KA L
Sbjct: 93 EKDPQKALDLYQKMIDLDVPQGFYDMGAMIGNRAGVKNPATDGLTFLDKAASLGNPPALT 152
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
LG LY V++ L Y S A YA LG Y ++V ++ KA+ Y+
Sbjct: 153 ELGKLYIY---VAKEKELGLAYASCASSQGYAPASYELGSYY---ELVENNYPKALSYYQ 206
Query: 162 KACDLNDGDGCTILGSLYDAGRGTP 186
+ L ++ G+ TP
Sbjct: 207 VSVSQGGRSAAFFLSRVF--GKRTP 229
>ref|NP_415180.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P77296|YBET_ECOLI Hypothetical protein ybeT
pir||E64799 ybeT protein - Escherichia coli
gb|AAB40848.1| (U82598) hypothetical protein [Escherichia coli]
gb|AAC73748.1| (AE000169) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35294.1| (D90704) Hypothetical protein SPAC24B11.10c [Escherichia coli]
dbj|BAA35299.1| (D90705) Hypothetical protein SPAC24B11.10c [Escherichia coli]
Length = 184
Score = 52.8 bits (125), Expect = 4e-06
Identities = 26/102 (25%), Positives = 54/102 (52%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGC 100
K D+TQA+ ++E++ + + LG +Y +G GV+ + +KA +Y +A + Y++
Sbjct: 80 KPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQ 139
Query: 101 HLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
+ LG +Y +G G++ N ++ ++ Y L G+
Sbjct: 140 YTLGLIYRNGSGINVNHYESQKWLKLTAKQHYKNAERLLAGL 181
Score = 42.4 bits (98), Expect = 0.006
Identities = 25/83 (30%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 65 FNLGVLYYQGQ-GVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQY 123
+ LG Y G G + +A +Y ++ + LG +Y G GV +T KA+ +
Sbjct: 67 YRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILW 126
Query: 124 YSKACDLKYAEGCASLGGIYHDG 146
Y +A + YA +LG IY +G
Sbjct: 127 YKEAAEQGYAHAQYTLGLIYRNG 149
>ref|NP_455031.1| (NC_003198) probable secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD08893.1| (AL627266) probable secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 223
Score = 50.1 bits (118), Expect = 3e-05
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 29/141 (20%)
Query: 100 CHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEY 159
C L G L+ + S+N +K D+KYA + +DF A+
Sbjct: 9 CILAGVLFANQVNASENNSKD--------DVKYAA-------------LTQKDFD-ALPV 46
Query: 160 FTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGE 219
+A L++ LG +++ G P + ++AL Y +AC+L + GC+N Y HG+
Sbjct: 47 EKRASVLDE------LGFIHEYGLNVPMNREQALQYYKQACELGGNYGCYNVKYAYQHGD 100
Query: 220 GATKNFKEALARYSKACELEN 240
G K+ +A +Y+K L+N
Sbjct: 101 GVAKDSAQA-NKYAKKMNLDN 120
Score = 42.7 bits (99), Expect = 0.005
Identities = 31/107 (28%), Positives = 48/107 (43%), Gaps = 8/107 (7%)
Query: 172 CTILGSLY----DAGRGTPKDLKKALASYDKACDL----KDSPGCFNAGNMYHHGEGATK 223
C + G L+ +A KD K A K D K + G ++ +G
Sbjct: 9 CILAGVLFANQVNASENNSKDDVKYAALTQKDFDALPVEKRASVLDELGFIHEYGLNVPM 68
Query: 224 NFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 270
N ++AL Y +ACEL GC+N+ +G+GV ++ QA + KK
Sbjct: 69 NREQALQYYKQACELGGNYGCYNVKYAYQHGDGVAKDSAQANKYAKK 115
Score = 42.7 bits (99), Expect = 0.005
Identities = 29/102 (28%), Positives = 52/102 (50%), Gaps = 9/102 (8%)
Query: 25 AEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKA 84
+E + K+ V A + K+ D +K +A L E LG ++ G V N ++A
Sbjct: 23 SENNSKDDVKYAALTQKDFDALPVEK---RASVLDE------LGFIHEYGLNVPMNREQA 73
Query: 85 ASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSK 126
+Y +AC+L + GC+ + Y G GV++++ +A +Y K
Sbjct: 74 LQYYKQACELGGNYGCYNVKYAYQHGDGVAKDSAQANKYAKK 115
>ref|NP_521481.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD17150.1| (AL646074) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 276
Score = 50.1 bits (118), Expect = 3e-05
Identities = 30/117 (25%), Positives = 54/117 (45%), Gaps = 3/117 (2%)
Query: 32 LVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKA 91
L+G G + +D+ +A +A D + + + LG++Y G G N AA ++ A
Sbjct: 136 LLGTGGVA---RDYPRALHLLRQAADRGDAAAAYYLGLMYRSGYGTAANTALAAHWFDGA 192
Query: 92 CDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKV 148
+L N Y G GV ++ +AL Y +A + + E +L Y +G++
Sbjct: 193 ARHGIPAAMFMLANAYRDGDGVPRDEARALALYEQAAEHELPEAVQALAMAYQNGEL 249
Score = 49.3 bits (116), Expect = 5e-05
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 1/114 (0%)
Query: 149 VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGC 208
V RD+ +A+ +A D D LG +Y +G GT + A +D A
Sbjct: 142 VARDYPRALHLLRQAADRGDAAAAYYLGLMYRSGYGTAANTALAAHWFDGAARHGIPAAM 201
Query: 209 FNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGE-GVTRNE 261
F N Y G+G ++ ALA Y +A E E L NGE G+ R++
Sbjct: 202 FMLANAYRDGDGVPRDEARALALYEQAAEHELPEAVQALAMAYQNGELGLARDD 255
>ref|NP_643252.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37788.1| (AE011936) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 252
Score = 50.1 bits (118), Expect = 3e-05
Identities = 36/161 (22%), Positives = 65/161 (40%)
Query: 47 QAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL 106
QA+ KA + L +Y +G+G+ + A +Y A + + + LG
Sbjct: 21 QARARLHKAAANHDVGAQLLLAQMYAEGRGIAADPAAAMLWYEVAANAGCAEAMNQLGRC 80
Query: 107 YYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDL 166
+ G G + N A+ +Y +A + A G +L +Y G+ V +D +A+ + +A +
Sbjct: 81 HELGFGTAINAVLAVLWYRRAAEHGLAWGMYNLAHMYASGRGVAQDHAQALALYHRAAEA 140
Query: 167 NDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPG 207
L D G D A Y ++ + D G
Sbjct: 141 GHAKSMNFLARYLDQGLACAADPLAACVWYRRSAEAGDFRG 181
Score = 44.3 bits (103), Expect = 0.002
Identities = 26/99 (26%), Positives = 48/99 (48%)
Query: 139 LGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDK 198
L +Y +G+ + D A+ ++ A + + LG ++ G GT + A+ Y +
Sbjct: 41 LAQMYAEGRGIAADPAAAMLWYEVAANAGCAEAMNQLGRCHELGFGTAINAVLAVLWYRR 100
Query: 199 ACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE 237
A + + G +N +MY G G ++ +ALA Y +A E
Sbjct: 101 AAEHGLAWGMYNLAHMYASGRGVAQDHAQALALYHRAAE 139
Score = 44.3 bits (103), Expect = 0.002
Identities = 30/114 (26%), Positives = 48/114 (41%)
Query: 162 KACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGA 221
KA +D +L +Y GRG D A+ Y+ A + + G + G G
Sbjct: 28 KAAANHDVGAQLLLAQMYAEGRGIAADPAAAMLWYEVAANAGCAEAMNQLGRCHELGFGT 87
Query: 222 TKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
N A+ Y +A E G +NL M +G GV ++ QA+ + + + G
Sbjct: 88 AINAVLAVLWYRRAAEHGLAWGMYNLAHMYASGRGVAQDHAQALALYHRAAEAG 141
>ref|NP_247788.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58208|Y798_METJA Hypothetical protein MJ0798
pir||F64399 hypothetical protein MJ0798 - Methanococcus jannaschii
gb|AAB98793.1| (U67524) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 334
Score = 49.7 bits (117), Expect = 4e-05
Identities = 55/187 (29%), Positives = 89/187 (47%), Gaps = 24/187 (12%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKK--AASFYAKAC 92
LG K+Y K + +A + KA +L +N+ +L +G + K K+ A ++ KA
Sbjct: 108 LGDKAYLWKAYYEALFCYNKALELNQNTE-----LLCKKGYALLKLYKRDLAIKYFEKAS 162
Query: 93 DLNYSNGCHL--LGNLYYSGQGVSQNTNKALQYYSKACDLKY--AEGCASLGGIYHDGKV 148
+ + +N L LG YY +S N N +++Y+ K +L E LG +Y++
Sbjct: 163 EKDRNNYKALFGLGKSYYL---MSDNKN-SIKYFEKVLELNPNDVEALEYLGELYYE--- 215
Query: 149 VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGC 208
D +KA+ YF KA +L D IL + + K K AL ++KA LK +P
Sbjct: 216 --EDCEKAINYFKKALELKPDDIDLILKVAFTYFK--LKKYKHALKYFEKA--LKLNPNV 269
Query: 209 FNAGNMY 215
F +Y
Sbjct: 270 FELEQIY 276
Score = 43.5 bits (101), Expect = 0.003
Identities = 42/145 (28%), Positives = 70/145 (47%), Gaps = 18/145 (12%)
Query: 30 KELVGLGAKSYKEKDFTQAKKYFEKACDLKEN--SGCFNLGVLYYQGQGVEKNLKKAASF 87
K L GLG Y D + KYFEK +L N LG LYY E++ +KA ++
Sbjct: 170 KALFGLGKSYYLMSDNKNSIKYFEKVLELNPNDVEALEYLGELYY-----EEDCEKAINY 224
Query: 88 YAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDL-----KYAEGCASLGGI 142
+ KA +L + L+ + ++ + + + AL+Y+ KA L + + S+G I
Sbjct: 225 FKKALELK-PDDIDLILKVAFTYFKLKKYKH-ALKYFEKALKLNPNVFELEQIYESMGRI 282
Query: 143 YHDGKVVTRDFKKAVEYFTKACDLN 167
Y + + +KA+E F K ++N
Sbjct: 283 Y----IYLGEDEKAIECFEKLKEIN 303
>ref|NP_439767.1| (NC_000907) H. influenzae predicted coding region HI1625
[Haemophilus influenzae Rd]
sp|P44277|YG25_HAEIN Hypothetical protein HI1625
pir||H64038 hypothetical protein HI1625 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC23273.1| (U32835) H. influenzae predicted coding region HI1625 [Haemophilus
influenzae Rd]
Length = 165
Score = 48.9 bits (115), Expect = 6e-05
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 66 NLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYS 125
NLG+LY G+G ++ +KA ++++A + G + LG +Y G V QNT +A++ +
Sbjct: 71 NLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFE 130
Query: 126 KACDLKYAEGCASLGGIY 143
+ K + L IY
Sbjct: 131 RTAQAKDTDAMMMLSNIY 148
Score = 43.9 bits (102), Expect = 0.002
Identities = 22/77 (28%), Positives = 42/77 (53%)
Query: 103 LGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
LG LY G+G ++ KA ++S+A + +G +LG +Y G V ++ ++A++ F +
Sbjct: 72 LGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFER 131
Query: 163 ACDLNDGDGCTILGSLY 179
D D +L ++Y
Sbjct: 132 TAQAKDTDAMMMLSNIY 148
Score = 42.4 bits (98), Expect = 0.006
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 210 NAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFK 269
N G +Y+ G G +++++A +S+A E + G NLG M G+ V +N +QAI+ F+
Sbjct: 71 NLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFE 130
Query: 270 K 270
+
Sbjct: 131 R 131
Score = 42.0 bits (97), Expect = 0.008
Identities = 20/79 (25%), Positives = 42/79 (52%)
Query: 137 ASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASY 196
++LG +Y+ G+ RD++KA +F++A + G LG +Y G ++ ++A+ +
Sbjct: 70 SNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLF 129
Query: 197 DKACDLKDSPGCFNAGNMY 215
++ KD+ N+Y
Sbjct: 130 ERTAQAKDTDAMMMLSNIY 148
>ref|XP_132104.1| (XM_132104) similar to Sel-1 homolog precursor (Suppressor of
lin-12-like protein) (Sel-1L) [Mus musculus]
Length = 253
Score = 48.9 bits (115), Expect = 6e-05
Identities = 34/112 (30%), Positives = 55/112 (48%), Gaps = 4/112 (3%)
Query: 69 VLYYQGQGVEKNLKKAASFYAK-ACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKA 127
+L++ QGV KN + A +YAK A + + + + GQGV +N AL+ KA
Sbjct: 1 MLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELMKKA 60
Query: 128 CDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLY 179
+ LG YH + +++ KA +Y+ KA ++ + D LG LY
Sbjct: 61 ASKGLHQAVNGLGWYYHKFR---KNYAKAAKYWLKAEEMGNPDASYNLGVLY 109
Score = 48.1 bits (113), Expect = 1e-04
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 51 YFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG 110
Y + A + ++ + ++ ++ ++GQGV+KN + A KA + LG Y+
Sbjct: 20 YAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHK- 78
Query: 111 QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDG---KVVTRDFKKAVEYFTKACDLN 167
+N KA +Y+ KA ++ + +LG +Y DG V R+ A EYF KA
Sbjct: 79 --FRKNYAKAAKYWLKAEEMGNPDASYNLGVLYLDGIFPGVPGRNLTLAGEYFHKAAQGG 136
Query: 168 DGDGCTILGSLYDAG--RGTPKDLKKAL 193
+G Y G P+D +KA+
Sbjct: 137 HIEGTLWCSLYYITGNLETFPRDPEKAV 164
>ref|NP_384642.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC45108.1| (AL591784) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 229
Score = 48.5 bits (114), Expect = 8e-05
Identities = 35/117 (29%), Positives = 50/117 (41%), Gaps = 4/117 (3%)
Query: 175 LGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSK 234
L +LY+ G G +D KA A Y KA ++ N M G + EA + K
Sbjct: 8 LANLYEKGAGVQRDAAKAKALYLKAAAAGNASAIHNLAVMLAGGRDGAPDLAEAAKWFEK 67
Query: 235 ACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGAC----DILKQLK 287
A L FNL + G+G+ RN + + + F + G K A +I K LK
Sbjct: 68 AANLGVRDSQFNLAVLYARGDGLARNLEDSYKWFAIAARDGDKDAAEKRDEIAKALK 124
Score = 47.4 bits (111), Expect = 2e-04
Identities = 32/133 (24%), Positives = 62/133 (46%), Gaps = 2/133 (1%)
Query: 65 FNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYY 124
+ L LY +G GV+++ KA + Y KA ++ H L + G+ + + +A +++
Sbjct: 6 YRLANLYEKGAGVQRDAAKAKALYLKAAAAGNASAIHNLAVMLAGGRDGAPDLAEAAKWF 65
Query: 125 SKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRG 184
KA +L + +L +Y G + R+ + + ++F A D D + A +
Sbjct: 66 EKAANLGVRDSQFNLAVLYARGDGLARNLEDSYKWFAIAARDGDKDAAEKRDEIAKALK- 124
Query: 185 TPKDLKKALASYD 197
P++L A A D
Sbjct: 125 -PEELSSAKAKVD 136
Score = 42.4 bits (98), Expect = 0.006
Identities = 25/90 (27%), Positives = 39/90 (42%)
Query: 139 LGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDK 198
L +Y G V RD KA + KA + L + GR DL +A ++K
Sbjct: 8 LANLYEKGAGVQRDAAKAKALYLKAAAAGNASAIHNLAVMLAGGRDGAPDLAEAAKWFEK 67
Query: 199 ACDLKDSPGCFNAGNMYHHGEGATKNFKEA 228
A +L FN +Y G+G +N +++
Sbjct: 68 AANLGVRDSQFNLAVLYARGDGLARNLEDS 97
Score = 42.4 bits (98), Expect = 0.006
Identities = 20/48 (41%), Positives = 30/48 (61%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKA 91
D +A K+FEKA +L FNL VLY +G G+ +NL+ + ++A A
Sbjct: 57 DLAEAAKWFEKAANLGVRDSQFNLAVLYARGDGLARNLEDSYKWFAIA 104
>prf||1920224A skt5 gene [Saccharomyces cerevisiae]
prf||2009318A SKT5 gene [Saccharomyces cerevisiae]
Length = 533
Score = 48.5 bits (114), Expect = 8e-05
Identities = 54/218 (24%), Positives = 90/218 (40%), Gaps = 12/218 (5%)
Query: 73 QGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL-YYSGQGVSQNTNKAL---QYYSKAC 128
+G G ++ +K+ +F A N+ + + LG +Y G+ + N L ++ S+A
Sbjct: 305 EGLGTTRDSRKSVNFLKFAASRNHPSAMYKLGLYSFYGRMGLPTDVNTKLNGVKWLSRAA 364
Query: 129 DLKYAEGCAS---LGGIYHDG--KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR 183
A+ L IYH+G VV D K A+E + +A L T+L +Y+ G
Sbjct: 365 ARANELTAAAPYELAKIYHEGFLDVVIPDEKYAMELYIQAASLGHVPSATLLAQIYETGN 424
Query: 184 GT-PKDLKKALASYDKACDLKDSPGCFNAGNMYHHG--EGATKNFKEALARYSKACELEN 240
T +D ++ Y +A DS Y G K+ EA +A
Sbjct: 425 DTVGQDTSLSVHYYTQAALKGDSVAMLGLCAWYLLGAEPAFEKDENEAFQWALRAANAGL 484
Query: 241 GGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKG 278
F LG +G+G RN + A + ++K +G
Sbjct: 485 PKAQFTLGYFYEHGKGCDRNMEYAWKWYEKAAGNRTRG 522
>ref|NP_638122.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM42046.1| (AE012390) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 252
Score = 48.1 bits (113), Expect = 1e-04
Identities = 31/119 (26%), Positives = 56/119 (47%)
Query: 119 KALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSL 178
+A+ KA D + L +Y +G+ V D +A+ ++ A + + LG
Sbjct: 21 QAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAMLWYEVAANAGHPEAMNQLGRC 80
Query: 179 YDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACE 237
++ G GTP +L+ A + +A G +N ++Y G G ++ +ALA Y +A E
Sbjct: 81 HELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASGRGVAQDHTQALALYRRAAE 139
Score = 47.4 bits (111), Expect = 2e-04
Identities = 41/150 (27%), Positives = 63/150 (41%), Gaps = 18/150 (12%)
Query: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
+A + KA D LL LY G+GV+ + +A+ +Y A + + E LG
Sbjct: 21 QAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAMLWYEVAANAGHPEAMNQLGRC 80
Query: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDL 202
+ G + + A +F +A G L LY +GRG +D +ALA Y +A +
Sbjct: 81 HELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASGRGVAQDHTQALALYRRAAE- 139
Query: 203 KDSPGCFNAGNMYHHGEGATKNFKEALARY 232
HG + NF +ARY
Sbjct: 140 --------------HGHAKSMNF---VARY 152
Score = 46.2 bits (108), Expect = 4e-04
Identities = 33/128 (25%), Positives = 57/128 (43%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLL 103
D QA ++E A + LG + G G NL+ AA ++ +A G + L
Sbjct: 54 DPIQAMLWYEVAANAGHPEAMNQLGRCHELGFGTPCNLELAALWFRRAAAHGLDWGMYNL 113
Query: 104 GNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA 163
+LY SG+GV+Q+ +AL Y +A + +A+ + G D A ++ ++
Sbjct: 114 AHLYASGRGVAQDHTQALALYRRAAEHGHAKSMNFVARYLEQGLAGAADPHAARAWYRRS 173
Query: 164 CDLNDGDG 171
+ D G
Sbjct: 174 AEAGDFRG 181
Score = 46.2 bits (108), Expect = 4e-04
Identities = 31/121 (25%), Positives = 51/121 (41%)
Query: 155 KAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNM 214
+AV KA D D +L LY GRG D +A+ Y+ A + G
Sbjct: 21 QAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAMLWYEVAANAGHPEAMNQLGRC 80
Query: 215 YHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKL 274
+ G G N + A + +A G +NL + +G GV ++ QA+ +++ +
Sbjct: 81 HELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASGRGVAQDHTQALALYRRAAEH 140
Query: 275 G 275
G
Sbjct: 141 G 141
>gb|AAH09945.1|AAH09945 (BC009945) Unknown (protein for IMAGE:4123572) [Homo sapiens]
Length = 705
Score = 48.1 bits (113), Expect = 1e-04
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 21 GGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKN 80
G A+Q +++ G + + + Y + A + ++ + ++ ++ ++GQGV+KN
Sbjct: 260 GNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKN 319
Query: 81 LKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLG 140
+ A KA + LG Y+ +N KA +Y+ KA ++ + +LG
Sbjct: 320 RRLALELMKKAASKGLHQAVNGLGWYYHK---FKKNYAKAAKYWLKAEEMGNPDASYNLG 376
Query: 141 GIYHDG---KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAG--RGTPKDLKKAL 193
++ DG V R+ A EYF KA +G Y G P+D +KA+
Sbjct: 377 VLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAV 434
>ref|NP_010078.1| (NC_001136) Hypothetical ORF; Ydl203cp [Saccharomyces cerevisiae]
pir||S67762 hypothetical protein YDL203c - yeast (Saccharomyces cerevisiae)
emb|CAA98781.1| (Z74251) ORF YDL203c [Saccharomyces cerevisiae]
emb|CAA67465.1| (X99000) ORF D1066 [Saccharomyces cerevisiae]
Length = 623
Score = 48.1 bits (113), Expect = 1e-04
Identities = 51/192 (26%), Positives = 76/192 (39%), Gaps = 26/192 (13%)
Query: 77 VEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVS---------QNTNKALQYYSKA 127
V KN +KA +Y KA LN S+ C+ G + +G S Q KA QYY
Sbjct: 342 VIKNDEKALEYYCKAAKLNNSDACYRAGVCFEYQRGTSSLDPSPTKEQCIKKAFQYYQHG 401
Query: 128 CDLKYAEGCASLGGIYH--DGKVVTRDFKKAVEYFTKACDLNDGDGCTI-LGSLYD---- 180
++ C G+ H + D A+++F KA D LG +Y+
Sbjct: 402 AEVCSNSACMYKLGMSHLYGLNMQKTDVLLAIKWFDKAAQKGDSPQTLYELGKIYEFSVL 461
Query: 181 --------AGRGTPKDLKKALASYDK-ACDLKDSPGCFNAGNMYHHGE-GATKNFKEALA 230
G KD + A+ Y + A D + + GN Y G+ G K+++
Sbjct: 462 PPEIQNLLFANGIRKDSQLAIKYYQQCAKDFEYPLAQWKLGNCYEFGDLGLPVVAKKSIY 521
Query: 231 RYSKACELENGG 242
YSKA + G
Sbjct: 522 WYSKAAAAQPKG 533
>ref|NP_252667.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||S57899 hypothetical protein 1 - Pseudomonas aeruginosa
pir||D83147 hypothetical protein PA3978 [imported] - Pseudomonas aeruginosa
(strain PAO1)
emb|CAA57576.1| (X82072) orf1 [Pseudomonas aeruginosa]
gb|AAG07365.1|AE004816_1 (AE004816) hypothetical protein [Pseudomonas aeruginosa]
Length = 182
Score = 48.1 bits (113), Expect = 1e-04
Identities = 28/96 (29%), Positives = 48/96 (49%)
Query: 186 PKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCF 245
P++L++ALA+ + + D+ + G ++ GE ++ + AL + KA + +
Sbjct: 42 PEELQQALAACQQVANGGDAEAQYELGEFFYDGERIPRDLQAALNWFEKASLQGHAQAQY 101
Query: 246 NLGAMQYNGEGVTRNEKQAIENFKKGCKLGAKGACD 281
+LG M + GEGV N QA K GA+ A D
Sbjct: 102 HLGTMFFRGEGVPANNVQAYIVLKMAAVNGAEDALD 137
>ref|XP_045277.1| (XM_045277) KIAA0746 protein [Homo sapiens]
Length = 979
Score = 48.1 bits (113), Expect = 1e-04
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 21 GGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKN 80
G A+Q +++ G + + + Y + A + ++ + ++ ++ ++GQGV+KN
Sbjct: 534 GNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKN 593
Query: 81 LKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLG 140
+ A KA + LG Y+ +N KA +Y+ KA ++ + +LG
Sbjct: 594 RRLALELMKKAASKGLHQAVNGLGWYYHK---FKKNYAKAAKYWLKAEEMGNPDASYNLG 650
Query: 141 GIYHDG---KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAG--RGTPKDLKKAL 193
++ DG V R+ A EYF KA +G Y G P+D +KA+
Sbjct: 651 VLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAV 708
>pir||T38028 hypothetical protein SPAC1B3.10c - fission yeast
(Schizosaccharomyces pombe)
Length = 700
Score = 48.1 bits (113), Expect = 1e-04
Identities = 50/212 (23%), Positives = 81/212 (37%), Gaps = 21/212 (9%)
Query: 27 QDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAAS 86
++P L+ LG +E + +A F +A K L YY G G +++ A+
Sbjct: 408 ENPHALMFLGLIRLEEARYEEAYHLFLRAATQKSVISYKYLADCYYNGTGTSRSMISASL 467
Query: 87 FYAKACDLNYSNGCHLLGNLYYSGQ-GVSQNTNKALQYYSKACDLKYAEGCASLGGIYHD 145
+Y K + ++ + L + G N + YY A + YA + + +
Sbjct: 468 YYKKFVEAIRASATSMAIALEEIDEYGYFHN---SFVYYLYAAQMGYALAEINAAYLMDE 524
Query: 146 GKVVTRDF----------------KKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDL 189
K + K A E++++A D D LG Y G GTPKD
Sbjct: 525 NKFLINSVFRYFNYTQSEQEAAHDKFAYEFYSRAAAQGDIDAIFKLGDYYYYGIGTPKDY 584
Query: 190 KKALASYDKACDLKD-SPGCFNAGNMYHHGEG 220
KA Y A + G +N M+ +G G
Sbjct: 585 SKAYTCYKIAYEQSSIGMGLWNMAYMHEYGIG 616
>ref|NP_390626.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
pir||H69978 conserved hypothetical protein yrrB - Bacillus subtilis
emb|CAB14690.1| (Z99117) similar to hypothetical proteins [Bacillus subtilis]
emb|CAB14707.1| (Z99118) similar to hypothetical proteins [Bacillus subtilis]
Length = 206
Score = 48.1 bits (113), Expect = 1e-04
Identities = 44/145 (30%), Positives = 64/145 (43%), Gaps = 21/145 (14%)
Query: 152 DFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGC--F 209
D++KA E FTKA + N D + + + +L++ALA YDKA +L S +
Sbjct: 5 DYEKAAEAFTKAIEENKEDAIPYIN--FANLLSSVNELERALAFYDKALELDSSAATAYY 62
Query: 210 NAGNMYHHGEGATKNFKEALARYSKACE--LENGGGCFNLG-----------AMQYNGEG 256
AGN+Y + +KEA + KA +ENG + LG A+ Y
Sbjct: 63 GAGNVY----VVKEMYKEAKDMFEKALRAGMENGDLFYMLGTVLVKLEQPKLALPYLQRA 118
Query: 257 VTRNEKQAIENFKKGCKLGAKGACD 281
V NE F+ G L +G D
Sbjct: 119 VELNENDTEARFQFGMCLANEGMLD 143
>ref|NP_594794.1| (NC_003424) hypothetical protein [Schizosaccharomyces pombe]
emb|CAB11247.2| (Z98598) hypothetical protein [Schizosaccharomyces pombe]
Length = 680
Score = 48.1 bits (113), Expect = 1e-04
Identities = 50/212 (23%), Positives = 81/212 (37%), Gaps = 21/212 (9%)
Query: 27 QDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAAS 86
++P L+ LG +E + +A F +A K L YY G G +++ A+
Sbjct: 408 ENPHALMFLGLIRLEEARYEEAYHLFLRAATQKSVISYKYLADCYYNGTGTSRSMISASL 467
Query: 87 FYAKACDLNYSNGCHLLGNLYYSGQ-GVSQNTNKALQYYSKACDLKYAEGCASLGGIYHD 145
+Y K + ++ + L + G N + YY A + YA + + +
Sbjct: 468 YYKKFVEAIRASATSMAIALEEIDEYGYFHN---SFVYYLYAAQMGYALAEINAAYLMDE 524
Query: 146 GKVVTRDF----------------KKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDL 189
K + K A E++++A D D LG Y G GTPKD
Sbjct: 525 NKFLINSVFRYFNYTQSEQEAAHDKFAYEFYSRAAAQGDIDAIFKLGDYYYYGIGTPKDY 584
Query: 190 KKALASYDKACDLKD-SPGCFNAGNMYHHGEG 220
KA Y A + G +N M+ +G G
Sbjct: 585 SKAYTCYKIAYEQSSIGMGLWNMAYMHEYGIG 616
>gb|AAH26655.1| (BC026655) Similar to KIAA0746 protein [Mus musculus]
Length = 426
Score = 48.1 bits (113), Expect = 1e-04
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 51 YFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG 110
Y + A + ++ + ++ ++ ++GQGV+KN + A KA + LG Y+
Sbjct: 11 YAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHK- 69
Query: 111 QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDG---KVVTRDFKKAVEYFTKACDLN 167
+N KA +Y+ KA ++ + +LG +Y DG V R+ A EYF KA
Sbjct: 70 --FRKNYAKAAKYWLKAEEMGNPDASYNLGVLYLDGIFPGVPGRNLTLAGEYFHKAAQGG 127
Query: 168 DGDGCTILGSLYDAG--RGTPKDLKKAL 193
+G Y G P+D +KA+
Sbjct: 128 HIEGTLWCSLYYITGNLETFPRDPEKAV 155
>dbj|BAA34466.1| (AB018289) KIAA0746 protein [Homo sapiens]
Length = 1029
Score = 48.1 bits (113), Expect = 1e-04
Identities = 43/178 (24%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 21 GGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKN 80
G A+Q +++ G + + + Y + A + ++ + ++ ++ ++GQGV+KN
Sbjct: 584 GNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKN 643
Query: 81 LKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLG 140
+ A KA + LG Y+ +N KA +Y+ KA ++ + +LG
Sbjct: 644 RRLALELMKKAASKGLHQAVNGLGWYYHK---FKKNYAKAAKYWLKAEEMGNPDASYNLG 700
Query: 141 GIYHDG---KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAG--RGTPKDLKKAL 193
++ DG V R+ A EYF KA +G Y G P+D +KA+
Sbjct: 701 VLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLETFPRDPEKAV 758
>ref|NP_539245.1| (NC_003317) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
gb|AAL51509.1| (AE009475) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
Length = 298
Score = 47.8 bits (112), Expect = 1e-04
Identities = 45/174 (25%), Positives = 72/174 (40%), Gaps = 8/174 (4%)
Query: 39 SYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSN 98
+Y +KD +A++ KA + FN G + + L A ++ KA D ++
Sbjct: 102 TYVQKDPQKAEELMLKAAEGGNAMAQFNYGQMLMVKHPGKPGLDLAFPWFQKAADAKLAD 161
Query: 99 GCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAV 157
G + + +Y +G +++N KA QY A Y LG +G+ R++++
Sbjct: 162 GEYAISQIYANGTDKIARNDIKARQYLVLAAQRGYDTAQFDLGRWLIEGRGGERNYEQGF 221
Query: 158 EYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASY-------DKACDLKD 204
+ A L LY G GT DL KA A Y +A DL D
Sbjct: 222 GWMHLAAQRGTVMAQAWLARLYRDGIGTEGDLVKAAAWYIVAQRAGFRAADLND 275
>ref|NP_455032.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD08894.1| (AL627266) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 181
Score = 47.0 bits (110), Expect = 2e-04
Identities = 40/148 (27%), Positives = 67/148 (45%), Gaps = 15/148 (10%)
Query: 65 FNLGVLY---YQGQGVEKNLKK---AASFYAKACDLNYSNGCHLLGNLYYSGQG----VS 114
+ LG+L + G V++ K + ++ A + LLG +Y G+G +
Sbjct: 3 YQLGLLTLNDFSGHYVDEPYKARPASLKWFRAAAEKGVVEAQSLLGGIYSGGEGDEWGIK 62
Query: 115 QNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTI 174
+ +A ++Y +A + ++ +LG IY+ G D+ KA+ FT+ NDG
Sbjct: 63 PDIQEAQKWYGQASEQGDSDAQIALGKIYYSGATGRTDYAKALALFTQV--ENDGTNSRS 120
Query: 175 ---LGSLYDAGRGTPKDLKKALASYDKA 199
L +Y G GT D KA + Y KA
Sbjct: 121 TMPLSWMYYNGLGTAPDCDKAWSYYKKA 148
>ref|NP_253775.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||B83011 hypothetical protein PA5088 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG08473.1|AE004921_10 (AE004921) hypothetical protein [Pseudomonas aeruginosa]
Length = 293
Score = 46.6 bits (109), Expect = 3e-04
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Query: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQ--GVSQNTNKALQYYSKACDLKYAEGCASLG 140
+ Y+KA + + H L +LY +G GV ++T KAL Y K DLK +G +
Sbjct: 64 RIVDLYSKAVERGHWKAMHNLASLYRTGWPGGVEKDTQKALDLYQKMIDLKVPQGFYDMA 123
Query: 141 GIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLY 179
+ + V + + KA L + T LG LY
Sbjct: 124 AMIGNRAGVKNPATDGLTFLDKAASLGNPPALTELGRLY 162
Score = 43.1 bits (100), Expect = 0.004
Identities = 34/139 (24%), Positives = 55/139 (39%), Gaps = 6/139 (4%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
EKD +A ++K DLK G +++ + GV+ +F KA L
Sbjct: 97 EKDTQKALDLYQKMIDLKVPQGFYDMAAMIGNRAGVKNPATDGLTFLDKAASLGNPPALT 156
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
LG LY V+ L+Y + A YA L Y ++V ++ KA Y+
Sbjct: 157 ELGRLYIY---VAGQDELGLKYTNCAAGQGYAPANYELAMYY---RLVAHNYPKAAGYYL 210
Query: 162 KACDLNDGDGCTILGSLYD 180
A + D + ++D
Sbjct: 211 LAASQGNDDAAFFMSGVFD 229
>gb|AAM08443.1| (AC116959) hypothetical protein [Dictyostelium discoideum]
Length = 778
Score = 45.8 bits (107), Expect = 5e-04
Identities = 27/83 (32%), Positives = 46/83 (54%), Gaps = 5/83 (6%)
Query: 51 YFEKACDLKENSGCFNLGVLYYQG-QGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYS 109
Y++K + E++ +++G+++ +G GV+ + +K FY A D N+ N C+ G+L Y
Sbjct: 392 YYQKNMMVPESA--YHVGIMFQRGIYGVQIDFEKTLFFYKIAADFNHLNACNNYGSLLYQ 449
Query: 110 GQGVSQNTNK--ALQYYSKACDL 130
G TNK L+Y K DL
Sbjct: 450 GILGPGKTNKDLGLEYIKKGADL 472
>ref|NP_487847.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB75506.1| (AP003594) ORF_ID:alr3807~hypothetical protein [Nostoc sp. PCC
7120]
Length = 604
Score = 45.8 bits (107), Expect = 5e-04
Identities = 42/144 (29%), Positives = 72/144 (49%), Gaps = 12/144 (8%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLK-ENSGCFNLGVLYYQGQGVEKNLK---KAASFYAK 90
LG + K + + QAK Y+++A D+ E +N +Y+Q V +NL+ +A ++Y +
Sbjct: 399 LGMVAQKLRKWEQAKTYYQQALDITIEFGDRYNQARIYHQLAIVAQNLREWQQAKTYYQQ 458
Query: 91 ACDLNYSNG-CHLLGNLYYSGQGVSQNT---NKALQYYSKACDLKYAEGCA-SLGGIYHD 145
A DL G + + Y+ V+QN +A YY +A D+ G S YH
Sbjct: 459 ALDLKIEFGDRYNQASTYHQLGMVAQNLREWEQAKTYYQQALDITIEFGDRYSQASTYHQ 518
Query: 146 GKVVT---RDFKKAVEYFTKACDL 166
+V R++++A Y+ +A DL
Sbjct: 519 LGIVAQNLREWEQAKTYYQQALDL 542
Score = 44.3 bits (103), Expect = 0.002
Identities = 54/228 (23%), Positives = 104/228 (44%), Gaps = 20/228 (8%)
Query: 32 LVGLGAKSYKEKDFTQAKKYFEKACDLKENSG-CFNLGVLYYQGQGVEKNLK---KAASF 87
L LG + F+QA K++++ D+++ G ++ Y++ V +NL+ +A ++
Sbjct: 316 LFKLGNAYLDLRQFSQAAKFYQQCLDIEQEIGDRYSQASTYHELGRVAQNLREWEQAKTY 375
Query: 88 YAKACDLNYSNG-CHLLGNLYYSGQGVSQNTNK---ALQYYSKACDLKYAEGCA-SLGGI 142
Y +A D+ G + + Y+ V+Q K A YY +A D+ G + I
Sbjct: 376 YQQALDITIEFGDRYNQASTYHQLGMVAQKLRKWEQAKTYYQQALDITIEFGDRYNQARI 435
Query: 143 YHDGKVVT---RDFKKAVEYFTKACDL--NDGDGCTILGSLYDAGRGTP--KDLKKALAS 195
YH +V R++++A Y+ +A DL GD + + G ++ ++A
Sbjct: 436 YHQLAIVAQNLREWQQAKTYYQQALDLKIEFGDRYNQASTYHQLGMVAQNLREWEQAKTY 495
Query: 196 YDKACDLKDSPG-CFNAGNMYHHGEGATKNFKE---ALARYSKACELE 239
Y +A D+ G ++ + YH +N +E A Y +A +L+
Sbjct: 496 YQQALDITIEFGDRYSQASTYHQLGIVAQNLREWEQAKTYYQQALDLK 543
>ref|NP_619470.1| (NC_003552) hypothetical protein (multi-domain) [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM07950.1| (AE011183) hypothetical protein (multi-domain) [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Length = 692
Score = 45.1 bits (105), Expect = 0.001
Identities = 50/205 (24%), Positives = 99/205 (47%), Gaps = 32/205 (15%)
Query: 27 QDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKE--------NSGCFNLGVLYYQGQGVE 78
QD K+L+ LG K +A+K EKA ++ +S +LG++Y Q E
Sbjct: 453 QDGKDLLDLGIFLIKISKPYEARKCLEKAEEIFSKNHDKVGISSTSHSLGIIYQQQGNYE 512
Query: 79 KNLKKAASFYAKACDLNYSNG----CHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAE 134
+ +KK +L +G + LGN++YS QG N +A++ Y+++ ++
Sbjct: 513 EAVKKYNQSLEMKEELGDKSGIAITLYQLGNIHYS-QG---NYEEAVKKYNQSLEMNKKP 568
Query: 135 GCAS--------LGGIYHDGKVVTRDFKKAVEYFTKACDLND--GDGCTILGSLYDAG-- 182
G S LG I+HD ++++AV+ + ++ ++ + GD I +L+ G
Sbjct: 569 GDKSGIAKTLHQLGMIHHD----KGNYEEAVKKYNQSLEIKEELGDKSGIAITLHQLGNI 624
Query: 183 RGTPKDLKKALASYDKACDLKDSPG 207
+ + ++A+ Y+++ +K+ G
Sbjct: 625 HYSQGNYEEAVKKYNQSLKIKEELG 649
>ref|NP_009492.1| (NC_001134) protoplast regeneration and killer toxin resistance
gene, may be a post-translational regulator of chitin
synthase III activity, interacts with Chs3p; Skt5p
[Saccharomyces cerevisiae]
sp|P34226|SKT5_YEAST SKT5 PROTEIN
pir||S39827 SKT5 protein - yeast (Saccharomyces cerevisiae)
emb|CAA80786.1| (Z23261) YBL0519 [Saccharomyces cerevisiae]
emb|CAA84882.1| (Z35823) ORF YBL061c [Saccharomyces cerevisiae]
Length = 696
Score = 44.7 bits (104), Expect = 0.001
Identities = 54/238 (22%), Positives = 88/238 (36%), Gaps = 58/238 (24%)
Query: 73 QGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNL-YYSGQGVSQNTNKAL---QYYSKAC 128
+G G ++ +K+ +F A N+ + + LG +Y G+ + N L ++ S+A
Sbjct: 319 EGLGTTRDSRKSVNFLKFAASRNHPSAMYKLGLYSFYGRMGLPTDVNTKLNGVKWLSRAA 378
Query: 129 DLKYAEGCAS---LGGIYHDG--KVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR 183
A+ L IYH+G VV D K A+E + +A L T+L +Y+ G
Sbjct: 379 ARANELTAAAPYELAKIYHEGFLDVVIPDEKYAMELYIQAASLGHVPSATLLAQIYETGN 438
Query: 184 GTP-KDLKKALASYDKACDLKDSPGC---------------------------------- 208
T +D ++ Y +A DS
Sbjct: 439 DTVGQDTSLSVHYYTQAALKGDSVAMLGLCAWYLLGAEPAFEKDENEAFQWALRAANAGL 498
Query: 209 ----FNAGNMYHHGEGATKNFKEALARYSKACELEN----------GGGCFNLGAMQY 252
F G Y HG+G +N + A Y KA E+ GG ++G Q+
Sbjct: 499 PKAQFTLGYFYEHGKGCDRNMEYAWKWYEKAAGNEDKRAINKLRSRDGGLASIGKKQH 556
>ref|NP_602587.1| (NC_003454) Tetratricopeptide repeat family protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gb|AAL93886.1| (AE010481) Tetratricopeptide repeat family protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 628
Score = 44.7 bits (104), Expect = 0.001
Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 34/216 (15%)
Query: 36 GAKSYKEKDFTQAKKYFEKACDLKENSGCF--NLGVLYYQGQGVEKNLKKAASFYAKACD 93
G Y + +A + + KA L N+ + + G +YY EK K+ Y KA
Sbjct: 136 GFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYY----EKAYNKSIEDYNKAIK 191
Query: 94 LNYSNGCHLLGNLYYSGQGVSQNTNK----ALQYYSKACDLK--YAEGCASLGGIYHDGK 147
L+ +N YY +G++ K A+ Y+KA L A C + G Y+ K
Sbjct: 192 LDPNNA------FYYDNRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLK 245
Query: 148 VVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPK----DLKKALASYDKACDLK 203
+K+A+ + KA L+ + Y RG + KAL YDKA +K
Sbjct: 246 ----KYKEAINDYDKAIKLDPNNAS------YFNNRGVAYNNLGEYSKALEDYDKA--IK 293
Query: 204 DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELE 239
+P A N F+EA+ Y+KA EL+
Sbjct: 294 LNPNYTFAYNNKGITFDNLGEFEEAIMNYNKAIELD 329
Score = 44.3 bits (103), Expect = 0.002
Identities = 63/250 (25%), Positives = 95/250 (37%), Gaps = 69/250 (27%)
Query: 41 KEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVE----KNLKKAASFYAKACDLNY 96
KE+ + ++Y EK N +YY +G+ K ++A + Y +A +LN
Sbjct: 6 KEELLKEIEEYTEKIEKEPNND-------IYYNNRGLSYFLLKKYEEAINDYNRAIELNL 58
Query: 97 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKA 156
+N + YY N+A YY C KY KA
Sbjct: 59 NNASY-----YY---------NRACSYY---CSNKY---------------------DKA 80
Query: 157 VEYFTKACDLNDGDGCTILGSLYDAGRG----TPKDLKKALASYDKACDLKDSPGCFNAG 212
+E + KA LN D C Y RG +A+ YDKA L + NA
Sbjct: 81 IEDYDKAIKLNPNDAC------YFNNRGHSYFALNKYSEAIEDYDKAIKLDPN----NAS 130
Query: 213 NMYHHGEG--ATKNFKEALARYSKACELE-NGGGCFNLGAMQYNGEGVTRNEKQAIENFK 269
Y G A + +A+ Y+KA +L+ N F+ Y E + ++IE++
Sbjct: 131 YYYKRGFSYYALNKYDKAIEDYNKAIKLDPNNAAYFSSRGDIYYYE---KAYNKSIEDYN 187
Query: 270 KGCKLGAKGA 279
K KL A
Sbjct: 188 KAIKLDPNNA 197
>gb|AAL08823.1|AF308666_2 (AF308666) hypothetical polar organelle development protein
[Cowdria ruminantium] [Ehrlichia ruminantium]
Length = 878
Score = 44.7 bits (104), Expect = 0.001
Identities = 37/137 (27%), Positives = 61/137 (44%), Gaps = 2/137 (1%)
Query: 156 AVEYFTKACDLNDGDGCTILGSLY-DAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNM 214
AVE +A L SLY D G G DL+++ A D D+ G +N G
Sbjct: 716 AVETLKQAAQTGYTPAQLHLASLYHDGGNGLAVDLEESRVWVRHAADRGDARGMYNYGMY 775
Query: 215 YHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGE-GVTRNEKQAIENFKKGCK 273
G G ++N EAL ++ E G FN+ + G+ G+T + +A + + +
Sbjct: 776 LFEGIGGSQNRAEALVWLKRSAERGLVDGQFNVAKLYETGDVGITPDLTEAYKWYLIASR 835
Query: 274 LGAKGACDILKQLKIKV 290
G A +++L++ V
Sbjct: 836 AGDIDAQSAVERLRVSV 852
>ref|NP_104918.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB50704.1| (AP003003) hypothetical protein [Mesorhizobium loti]
Length = 346
Score = 44.7 bits (104), Expect = 0.001
Identities = 37/158 (23%), Positives = 65/158 (40%), Gaps = 1/158 (0%)
Query: 40 YKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNG 99
Y +KD +A + A + FN + + + L KA S+Y +A ++
Sbjct: 153 YVKKDPKEAYALMQAAAEAGNQLAQFNFAQMLVRQDPGDTGLAKAVSYYERAAATGLADA 212
Query: 100 CHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVE 158
+ + +Y +G G ++ +A ++ ++A Y L +G+ RD K A
Sbjct: 213 QYAMSQIYANGVGGKPRDDAQARRFLAQAARQNYDTAQIDLAAWMIEGRGGARDLKSAFG 272
Query: 159 YFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASY 196
+ +A + + L LY G GT DL A A Y
Sbjct: 273 WTKQAAEGGNVAAQNRLAKLYMQGIGTDPDLVLAGAWY 310
>ref|NP_253206.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||F83081 hypothetical protein PA4516 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG07904.1|AE004865_5 (AE004865) hypothetical protein [Pseudomonas aeruginosa]
Length = 271
Score = 44.7 bits (104), Expect = 0.001
Identities = 32/130 (24%), Positives = 57/130 (43%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
++D T A+ +F A + L G G + AA Y A +
Sbjct: 57 QRDPTLARTWFTIAAERGHAMARNMLARCLEHGWGGPADPAAAAVHYRIAAQAGLDWARY 116
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFT 161
L NL+ +G+GV Q+ +A Y +A + +A+ +G + +G VV RD +A ++
Sbjct: 117 NLANLHATGRGVPQDQPRAYALYRQAAEQGHAKSMNLVGRYHEEGLVVARDLAQAAHWYR 176
Query: 162 KACDLNDGDG 171
++ + D G
Sbjct: 177 RSAEGGDFRG 186
Score = 43.1 bits (100), Expect = 0.004
Identities = 37/142 (26%), Positives = 56/142 (39%)
Query: 134 EGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKAL 193
E A LG I DG+ + RD A +FT A + +L + G G P D A
Sbjct: 41 EAQALLGQILLDGQGIQRDPTLARTWFTIAAERGHAMARNMLARCLEHGWGGPADPAAAA 100
Query: 194 ASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYN 253
Y A +N N++ G G ++ A A Y +A E + +G
Sbjct: 101 VHYRIAAQAGLDWARYNLANLHATGRGVPQDQPRAYALYRQAAEQGHAKSMNLVGRYHEE 160
Query: 254 GEGVTRNEKQAIENFKKGCKLG 275
G V R+ QA +++ + G
Sbjct: 161 GLVVARDLAQAAHWYRRSAEGG 182
>gb|AAK01327.1|AF265265_1 (AF265265) unknown [uncultured organism HB1-37]
Length = 168
Score = 44.3 bits (103), Expect = 0.002
Identities = 30/106 (28%), Positives = 52/106 (48%), Gaps = 7/106 (6%)
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDL---KYAEGCASLGGIYHDGKVVTRDFKKAVE 158
+LG +Y +GQG +N KALQ+Y +A + A ++L I D D+++ +
Sbjct: 42 MLGFIYDTGQGARRNLAKALQWYLRAYKVGGTTAALAASNLATICRD----NGDWRQEFQ 97
Query: 159 YFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKD 204
++ +A L DGD + Y AG+G + A+ + A K+
Sbjct: 98 WYVRAAKLGDGDSLVEVEIRYLAGKGVKRSPTMAVKHFKAAVRSKN 143
Score = 42.7 bits (99), Expect = 0.005
Identities = 29/117 (24%), Positives = 53/117 (44%), Gaps = 1/117 (0%)
Query: 153 FKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAG 212
+K A F + D +LG +YD G+G ++L KAL Y +A + + A
Sbjct: 21 WKPAFRAFLVLAEQGDETAFLMLGFIYDTGQGARRNLAKALQWYLRAYKVGGTTAALAAS 80
Query: 213 NMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFK 269
N+ ++++ Y +A +L +G + G+GV R+ A+++FK
Sbjct: 81 NLATICRD-NGDWRQEFQWYVRAAKLGDGDSLVEVEIRYLAGKGVKRSPTMAVKHFK 136
>ref|NP_187761.1| (NM_111987) spindly (gibberellin signal transduction protein)
[Arabidopsis thaliana]
gb|AAC49446.1| (U62135) SPINDLY [Arabidopsis thaliana]
gb|AAG51433.1|AC008153_6 (AC008153) spindly (gibberellin signal transduction protein);
75377-80082 [Arabidopsis thaliana]
Length = 914
Score = 44.3 bits (103), Expect = 0.002
Identities = 57/190 (30%), Positives = 78/190 (41%), Gaps = 28/190 (14%)
Query: 32 LVGLGAKSYKEKDFTQAKKYFEKAC--DLKENSGCFNLGVLYYQGQGVEKNLKKAASFYA 89
L LG K E D TQ Y++KA + +NLGV Y G A FY
Sbjct: 264 LTDLGTKVKLEGDVTQGVAYYKKALYYNWHYADAMYNLGVAY----GEMLKFDMAIVFYE 319
Query: 90 KACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 145
A N + C+ LG LY N +KA++ Y A +K +A+ +LG +Y
Sbjct: 320 LAFHFNPHCAEACNNLGVLYKD----RDNLDKAVECYQMALSIKPNFAQSLNNLGVVY-- 373
Query: 146 GKVVTRDFKKAVEYFTKACDLND--GDGCTILGSLY-DAGRGTPKDLKKALASYDKACDL 202
V A KA N + LG LY DAG ++ A+ +Y++ L
Sbjct: 374 --TVQGKMDAAASMIEKAILANPTYAEAFNNLGVLYRDAG-----NITMAIDAYEEC--L 424
Query: 203 KDSPGCFNAG 212
K P NAG
Sbjct: 425 KIDPDSRNAG 434
>gb|AAC60564.1| (S65415) protoplast regeneration and killer toxin resistance gene
[Saccharomyces cerevisiae]
Length = 664
Score = 43.9 bits (102), Expect = 0.002
Identities = 44/167 (26%), Positives = 66/167 (39%), Gaps = 19/167 (11%)
Query: 103 LGNLYYSG--QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGK-VVTRDFKKAVEY 159
L +Y+ G V + A++ Y +A L + L IY G V +D +V Y
Sbjct: 378 LAKIYHEGFLDVVIPDEKYAMELYIQAASLGHVPSATLLAQIYETGNDTVGQDTSLSVHY 437
Query: 160 FTKACDLNDGDGCTILGS----LYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMY 215
+T+A GD +LG L A KD +A +A + F G Y
Sbjct: 438 YTQAA--LKGDSVAMLGLCAWYLLGAEPAFEKDENEAFQWALRAANAGLPKAQFTLGYFY 495
Query: 216 HHGEGATKNFKEALARYSKACELEN----------GGGCFNLGAMQY 252
HG+G +N + A Y KA E+ GG ++G Q+
Sbjct: 496 EHGKGCDRNMEYAWKWYEKAAGNEDKRAINKLRSRDGGLASIGKKQH 542
>gb|EAA03532.1| (AAAB01008794) agCP14246 [Anopheles gambiae str. PEST]
Length = 443
Score = 43.5 bits (101), Expect = 0.003
Identities = 25/114 (21%), Positives = 50/114 (42%), Gaps = 1/114 (0%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
LG ++ + ++ A + + + FNLG+ Y QG G+ K++ A Y A
Sbjct: 292 LGCRNLELGEYASAVSHLKLGTSHQHAGAAFNLGICYEQGYGIPKDMAMALECYQLAAKQ 351
Query: 95 NYSNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGK 147
+ + +G + G G+ + + A +Y+ A +L + +LG Y +
Sbjct: 352 GHPQAIYNVGVFHARGFAGLRPSRSMAKKYFLAAAELGLQDAIVALGPKYRTSR 405
>ref|NP_253773.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||H83010 hypothetical protein PA5086 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG08471.1|AE004921_8 (AE004921) hypothetical protein [Pseudomonas aeruginosa]
Length = 213
Score = 43.5 bits (101), Expect = 0.003
Identities = 33/119 (27%), Positives = 49/119 (40%), Gaps = 6/119 (5%)
Query: 42 EKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCH 101
EKD +A ++K DL G +++G + GV+ +F KA L
Sbjct: 17 EKDTQKALDLYQKMIDLDVPQGFYDMGAMIGNRAGVKNPATDGLTFLDKAASLGNPPALT 76
Query: 102 LLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYF 160
LG Y V++ + L Y A YA LG Y K+V +F KA+ Y+
Sbjct: 77 ELGKFYIY---VAKKKDLGLAYTHCAASQGYAPASYELGAYY---KIVEHNFPKALVYY 129
Score = 43.5 bits (101), Expect = 0.003
Identities = 41/134 (30%), Positives = 54/134 (39%), Gaps = 8/134 (5%)
Query: 101 HLLGNLYYSGQ--GVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVE 158
H L NLY +G GV ++T KAL Y K DL +G +G + + V +
Sbjct: 2 HNLANLYRTGWPGGVEKDTQKALDLYQKMIDLDVPQGFYDMGAMIGNRAGVKNPATDGLT 61
Query: 159 YFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHG 218
+ KA L + T LG Y KDL LA A +P + G Y
Sbjct: 62 FLDKAASLGNPPALTELGKFY-IYVAKKKDL--GLAYTHCAASQGYAPASYELGAYYKIV 118
Query: 219 EGATKNFKEALARY 232
E NF +AL Y
Sbjct: 119 E---HNFPKALVYY 129
>ref|NP_588282.1| (NC_003421) hypothetical protein [Schizosaccharomyces pombe]
pir||T41340 hypothetical protein SPCC417.05c - fission yeast
(Schizosaccharomyces pombe)
emb|CAA22651.1| (AL035076) hypothetical protein [Schizosaccharomyces pombe]
Length = 512
Score = 43.5 bits (101), Expect = 0.003
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 6/124 (4%)
Query: 37 AKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNY 96
A Y +Q +F + L + C+ G L E N K+A Y A DLN+
Sbjct: 206 AFDYLTSFVSQGNSFFGYSEALYLLAVCYGTGALR-----TEINEKEAYRLYKMAADLNH 260
Query: 97 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKV-VTRDFKK 155
+ + G GV+QNT +A+ Y+ +A ++ + IY G + V RD K
Sbjct: 261 VQAAYRVAICLQMGFGVTQNTEEAIHYFFRAASGQHVGAMHRMALIYFRGLMSVKRDPVK 320
Query: 156 AVEY 159
A+ Y
Sbjct: 321 AMYY 324
>gb|EAA08334.1| (AAAB01008879) agCP2877 [Anopheles gambiae str. PEST]
Length = 443
Score = 43.1 bits (100), Expect = 0.004
Identities = 25/114 (21%), Positives = 50/114 (42%), Gaps = 1/114 (0%)
Query: 35 LGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDL 94
LG ++ + ++ A + + + FNLG+ Y QG G+ K++ A Y A
Sbjct: 292 LGCRNLELGEYASAVSHLKLGTSHQHAGAAFNLGICYEQGYGIPKDMAMAFECYQLAAKQ 351
Query: 95 NYSNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGK 147
+ + +G + G G+ + + A +Y+ A +L + +LG Y +
Sbjct: 352 GHPQAIYNVGVFHARGFAGLRPSRSMAKKYFLAAAELGLQDAIVALGPKYRTSR 405
>ref|NP_564992.1| (NM_105727) expressed protein [Arabidopsis thaliana]
gb|AAK59789.1| (AY037204) At1g70590/F5A18_23 [Arabidopsis thaliana]
Length = 351
Score = 43.1 bits (100), Expect = 0.004
Identities = 31/134 (23%), Positives = 62/134 (46%), Gaps = 2/134 (1%)
Query: 32 LVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKA 91
+V G ++ + +A + +A +L + G NLG+ Y Q Q N K+A + ++
Sbjct: 145 MVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNLGIAYLQVQ--PSNPKEAMKWLKQS 202
Query: 92 CDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTR 151
+ Y + L + G+ V N +A ++Y KA + Y ++ Y G+ + +
Sbjct: 203 AENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQ 262
Query: 152 DFKKAVEYFTKACD 165
+ K A ++ +A D
Sbjct: 263 NRKLARKWMKRAAD 276
Score = 42.7 bits (99), Expect = 0.005
Identities = 44/173 (25%), Positives = 68/173 (38%), Gaps = 7/173 (4%)
Query: 104 GNLYYSGQG-VSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
G Y G+G V N +KAL + K G +Y + + +KAV + +
Sbjct: 112 GKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWE----RGEKEKAVNLYRR 167
Query: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
A +L D G LG Y + P + K+A+ ++ + + HHG
Sbjct: 168 ASELGDAVGQCNLGIAYLQVQ--PSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQ 225
Query: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKKGCKLG 275
N EA Y KA E +N+ GEG+ +N K A + K+ G
Sbjct: 226 TNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRAADHG 278
>ref|NP_592847.1| (NC_003424) similar to yeast protoplast regeneration and killer
toxin resistance protein [Schizosaccharomyces pombe]
sp|Q09897|YAIA_SCHPO Hypothetical protein C24B11.10c in chromosome I
pir||S62555 protoplast regeneration, killer toxin resistance protein homolog -
fission yeast (Schizosaccharomyces pombe)
pir||T38337 protoplast regeneration, killer toxin resistance protein homolog -
fission yeast (Schizosaccharomyces pombe)
emb|CAA91775.1| (Z67757) similar to yeast protoplast regeneration and killer toxin
resistance protein [Schizosaccharomyces pombe]
Length = 932
Score = 42.7 bits (99), Expect = 0.005
Identities = 49/227 (21%), Positives = 89/227 (38%), Gaps = 17/227 (7%)
Query: 65 FNLGVLYYQGQ-GVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQY 123
F +G + QG G ++L KA Y+ A + + + +G GV +T+K +
Sbjct: 642 FLIGQFHSQGVLGFRRDLGKAFELYSLAAKKGHPLSNYRVAVCLQTGTGVKPDTSKCVAI 701
Query: 124 YSKACDLKYAEGCASLGGIYHDGKV-VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAG 182
Y KA ++ E + IY +G + R+ V++ +AC G + ++Y+
Sbjct: 702 YKKAAEMDVVEAMFRIALIYLNGLLGQKRNISLGVQWLERAC---KSKGPESVRAMYELA 758
Query: 183 R--------GTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHG-EGATKNFKEALARYS 233
+ G ++ Y ++ + G Y HG G + ++ Y+
Sbjct: 759 KIYEQPDRYGVSATPERKFELYKQSAVYGYAAAQCKLGECYEHGLLGCLAEPRRSIFWYT 818
Query: 234 KACELENGGGCFNLGAMQYNG-EGV--TRNEKQAIENFKKGCKLGAK 277
+A E + G L G EG+ E+ + K CK AK
Sbjct: 819 RAAEQDYGEAELGLSGWYLTGSEGILPKNGEEALLWAHKAACKGLAK 865
>ref|NP_347702.1| (NC_003030) TPR-repeat containing protein [Clostridium
acetobutylicum]
gb|AAK79042.1|AE007622_4 (AE007622) TPR-repeat containing protein [Clostridium
acetobutylicum]
Length = 256
Score = 42.4 bits (98), Expect = 0.006
Identities = 38/136 (27%), Positives = 65/136 (46%), Gaps = 16/136 (11%)
Query: 30 KELVGLGAKSYKEKDFTQAKKYFEKACDLKENSG--CFNLGVLYYQGQGVEKNLKKAASF 87
+ ++ LG K++ F++A + F+KA + N F LG+ Y+ KN KA F
Sbjct: 71 RPVLNLGRVFIKKQMFSEALECFQKALKINPNEEETYFYLGIYYF----TMKNFNKATEF 126
Query: 88 YAKACDLNYS-NGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDG 146
Y KA ++N S HL + YS G+ + A+ + A L +S+ +++
Sbjct: 127 YKKALEINNSIPEVHLNLGICYSKIGLDE---MAIDEFDDAFRLDN----SSVDALFNKA 179
Query: 147 KV--VTRDFKKAVEYF 160
V +D+ KA+E F
Sbjct: 180 MVFIFMKDYNKAIEMF 195
>ref|NP_463149.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL23108.1| (AE008901) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 229
Score = 42.4 bits (98), Expect = 0.006
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKAC-DLNYSNGCH- 101
D+ AKK EKA + +G L + Q + KA S KA DL+ +
Sbjct: 85 DYPDAKKLAEKAANAGSKAGEITLARILVNTQAGRPDYPKAISLLQKASEDLDNDSAVDA 144
Query: 102 --LLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKA 156
LLG +Y +G G++ + KA Y+ ++ + Y+E A + + + + ++ +KA
Sbjct: 145 QMLLGLIYANGVGIAADDEKAAWYFKRSSAISRTGYSEYWAGMMFLNGEPGFIEKNKQKA 204
Query: 157 VEYFTKACDLNDGDGC 172
+ + +C GC
Sbjct: 205 LHWLNLSCLEGFDTGC 220
>ref|NP_011022.1| (NC_001137) sporulation-specific homolog of csd4; Shc1p
[Saccharomyces cerevisiae]
sp|P39000|YES6_YEAST HYPOTHETICAL 56.6 KD PROTEIN IN RAD51-UBP9 INTERGENIC REGION
pir||S50599 SHC1 protein - yeast (Saccharomyces cerevisiae)
gb|AAB64651.1| (U18839) Yer096wp [Saccharomyces cerevisiae]
Length = 512
Score = 42.4 bits (98), Expect = 0.006
Identities = 56/231 (24%), Positives = 87/231 (37%), Gaps = 15/231 (6%)
Query: 49 KKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYY 108
+K E +L++ S F++ L E + A K + Y + +LLG+ Y
Sbjct: 276 EKLHELVKELEDESNSFSVDSLK------EYLVNDAKVILKKLSAVGYPDAQYLLGDAYS 329
Query: 109 SGQGVSQNTNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLND 168
SG +A +S A + E Y G VTR+ KAV + T A N
Sbjct: 330 SGVFGKIKNRRAFLLFSAAAKRMHIESVYRTAICYECGLGVTRNAPKAVNFLTFAATKNH 389
Query: 169 GDGCTILGSL-YDAGRGTPKDLKKALASY---DKACDLKDSPGC---FNAGNMYHHG--E 219
LG Y G P D+ + Y +A + S C F N+Y G +
Sbjct: 390 PAAMYKLGVYSYHGLMGLPDDILTKMDGYRWLRRATSMASSFVCGAPFELANIYMTGYKD 449
Query: 220 GATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRNEKQAIENFKK 270
+ A+A Y KA L + L + +G V+R + + + K
Sbjct: 450 LIISDPDYAMALYEKAAALGHTESARILEDARRSGGFVSRGHPPSAQKYHK 500
>emb|CAA76834.1| (Y17720) SPINDLY protein [Petunia x hybrida]
Length = 932
Score = 42.4 bits (98), Expect = 0.006
Identities = 59/211 (27%), Positives = 84/211 (38%), Gaps = 33/211 (15%)
Query: 32 LVGLGAKSYKEKDFTQAKKYFEKAC--DLKENSGCFNLGVLYYQGQGVEKNLKKAASFYA 89
L LG K E D Q Y++KA + +NLGV Y G A FY
Sbjct: 269 LTDLGTKVKLEGDINQGVAYYKKALYYNWHYADAMYNLGVAY----GEMLKFDMAIVFYE 324
Query: 90 KACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 145
A N + C+ LG +Y N +KA++ Y A +K +++ +LG +Y
Sbjct: 325 LAFHFNPHCAEACNNLGVIYKD----RDNLDKAVECYQMALTIKPNFSQSLNNLGVVY-- 378
Query: 146 GKVVTRDFKKAVEYFTKACDLND--GDGCTILGSLY-DAGRGTPKDLKKALASYDKACDL 202
V A KA N + LG LY DAG ++ A+ +Y++ L
Sbjct: 379 --TVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAG-----NISLAIEAYEQC--L 429
Query: 203 KDSPGCFNAGN-----MYHHGEGATKNFKEA 228
K P NAG M + EG+ EA
Sbjct: 430 KIDPDSRNAGQNRLLAMNYINEGSDDKLYEA 460
>ref|NP_458583.1| (NC_003198) putative exported protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD09269.1| (AL627282) putative exported protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 229
Score = 42.4 bits (98), Expect = 0.006
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 7/136 (5%)
Query: 44 DFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLKKAASFYAKAC-DLNYSNGCH- 101
D+ AKK EKA + +G L + Q + KA S KA DL+ +
Sbjct: 85 DYPDAKKLAEKAANAGSKAGEITLARILVNTQAGRPDYPKAISLLQKASEDLDNDSAVDA 144
Query: 102 --LLGNLYYSGQGVSQNTNKALQYYSKACDLK---YAEGCASLGGIYHDGKVVTRDFKKA 156
LLG +Y +G G++ + KA Y+ ++ + Y+E A + + + + ++ +KA
Sbjct: 145 QMLLGLIYANGVGIAADDEKAAWYFKRSSAISRTGYSEYWAGMMFLNGEPGFIEKNKQKA 204
Query: 157 VEYFTKACDLNDGDGC 172
+ + +C GC
Sbjct: 205 LHWLNLSCLEGFDTGC 220
>ref|NP_439711.1| (NC_000907) H. influenzae predicted coding region HI1562
[Haemophilus influenzae Rd]
sp|P44254|YF62_HAEIN Protein HI1562
pir||C64036 hypothetical protein HI1562 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC23220.1| (U32831) H. influenzae predicted coding region HI1562
[Haemophilus influenzae Rd]
Length = 52
Score = 42.4 bits (98), Expect = 0.006
Identities = 21/41 (51%), Positives = 26/41 (63%), Gaps = 3/41 (7%)
Query: 24 MAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGC 64
M +DPK L+ LG EKD ++AKKYF ACDL+ GC
Sbjct: 1 MLSKDPKVLIKLGEL---EKDKSKAKKYFGDACDLRSQEGC 38
>emb|CAC85168.1| (AJ312093) SPY protein [Lycopersicon esculentum]
emb|CAC85169.1| (AJ312094) SPY protein [Lycopersicon esculentum]
Length = 931
Score = 42.0 bits (97), Expect = 0.008
Identities = 59/211 (27%), Positives = 83/211 (38%), Gaps = 33/211 (15%)
Query: 32 LVGLGAKSYKEKDFTQAKKYFEKAC--DLKENSGCFNLGVLYYQGQGVEKNLKKAASFYA 89
L LG K E D Q Y++KA + +NLGV Y G A FY
Sbjct: 269 LTDLGTKVKLEGDINQGVAYYKKALCYNWHYADAMYNLGVAY----GEMLKFDMAIVFYE 324
Query: 90 KACDLN--YSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLK--YAEGCASLGGIYHD 145
A N + C+ LG +Y N +KA++ Y A +K +++ +LG +Y
Sbjct: 325 LAFHFNPHCAEACNNLGVIYKD----RDNLDKAVECYQLALSIKPNFSQSLNNLGVVY-- 378
Query: 146 GKVVTRDFKKAVEYFTKACDLND--GDGCTILGSLY-DAGRGTPKDLKKALASYDKACDL 202
V A KA N + LG LY DAG ++ A+ +Y++ L
Sbjct: 379 --TVQGKMDAAASMIEKAIIANPTYAEAYNNLGVLYRDAG-----NISLAIEAYEQC--L 429
Query: 203 KDSPGCFNAGN-----MYHHGEGATKNFKEA 228
K P NAG M + EG EA
Sbjct: 430 KIDPDSRNAGQNRLLAMNYINEGTDDKLYEA 460
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.317 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 200,159,776
Number of Sequences: 1026957
Number of extensions: 9220492
Number of successful extensions: 19337
Number of sequences better than 1.0e-02: 150
Number of HSP's better than 0.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 58
Number of HSP's that attempted gapping in prelim test: 17727
Number of HSP's gapped (non-prelim): 665
length of query: 290
length of database: 324,149,939
effective HSP length: 120
effective length of query: 170
effective length of database: 200,915,099
effective search space: 34155566830
effective search space used: 34155566830
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 97 (42.0 bits)