BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645729|ref|NP_207906.1| hypothetical protein
[Helicobacter pylori 26695]
(228 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207906.1| (NC_000915) hypothetical protein [Helicoba... 437 e-122
ref|NP_207286.1| (NC_000915) hypothetical protein [Helicoba... 423 e-118
ref|NP_223759.1| (NC_000921) putative [Helicobacter pylori ... 363 e-100
ref|NP_223159.1| (NC_000921) putative [Helicobacter pylori ... 249 2e-65
emb|CAC95143.1| (AJ416752) variable membrane protein [Mycop... 60 2e-08
ref|NP_472958.1| (NC_000910) hypothetical protein [Plasmodi... 54 1e-06
dbj|BAB63727.1| (AP003294) putative myosin heavy chain-like... 53 3e-06
pir||T28677 rhoptry protein - Plasmodium yoelii >gi|457146|... 49 3e-05
sp|P39922|MYS3_HYDAT Myosin heavy chain, clone 203 >gi|5312... 47 1e-04
pir||JC6009 surface-located membrane protein lmp3 precursor... 47 2e-04
ref|NP_374548.1| (NC_002745) hypothetical protein, similar ... 47 2e-04
ref|NP_371958.1| (NC_002758) hypothetical protein [Staphylo... 47 2e-04
emb|CAB62885.1| (AL035475) hypothetical protein, MAL4P2.44 ... 47 2e-04
ref|NP_488975.1| (NC_003272) unknown protein [Nostoc sp. PC... 46 3e-04
ref|NP_078280.1| (NC_002162) unique hypothetical membrane l... 46 3e-04
ref|NP_663211.1| (NC_004062) hypothetical protein [Phthorim... 46 4e-04
pir||T18372 repeat organellar protein - Plasmodium chabaudi... 46 4e-04
emb|CAC03101.1| (X53024) erythrocyte membrane-associated an... 45 5e-04
pir||S23693 erythrocyte membrane-associated antigen (clone ... 45 5e-04
ref|NP_593009.1| (NC_003424) hypothetical coiled-coil prote... 45 5e-04
gb|EAA14712.1| (AAAB01008984) ebiP5315 [Anopheles gambiae s... 45 5e-04
pir||C40892 apolipoprotein A-IV precursor - mouse 45 6e-04
gb|AAK40230.1|AF356600_1 (AF356600) filament-interacting pr... 45 6e-04
gb|AAA37216.1| (M64250) apolipoprotein A-IV [Mus musculus c... 45 6e-04
sp|P06728|APA4_MOUSE APOLIPOPROTEIN A-IV PRECURSOR (APO-AIV... 45 8e-04
ref|NP_112550.1| (NM_031260) Moloney leukemia virus 10-like... 45 8e-04
ref|XP_122853.1| (XM_122853) Moloney leukemia virus 10-like... 45 8e-04
pir||B40892 apolipoprotein A-IV precursor - mouse (strain 1... 45 8e-04
pir||T18352 protein P120 - Mycoplasma hominis >gi|805101|gb... 45 8e-04
ref|NP_562530.1| (NC_003366) probable cell wall-binding pro... 44 0.001
ref|NP_282643.1| (NC_002163) putative MCP-type signal trans... 44 0.001
ref|NP_048227.1| (NC_001993) ORF MSV156 hypothetical protei... 44 0.001
ref|NP_645581.1| (NC_003923) fibrinogen-binding protein [St... 44 0.001
ref|NP_646516.1| (NC_003923) ORFID:MW1699~hypothetical prot... 44 0.001
ref|NP_282010.1| (NC_002163) hypothetical protein Cj0849c [... 44 0.001
ref|NP_372282.1| (NC_002758) Mrp protein [Staphylococcus au... 44 0.001
ref|NP_374866.1| (NC_002745) hypothetical protein, simialr ... 44 0.001
emb|CAA66612.1| (X97969) Sb component [Clostridium spiroforme] 44 0.002
dbj|BAB23620.1| (AK004856) apolipoprotein A-IV~data source:... 44 0.002
gb|AAB96359.2| (U57551) high molecular weight outer membran... 44 0.002
ref|NP_232619.1| (NC_002506) hemolysin secretion protein Hy... 44 0.002
pir||S15910 hemolysin-releasing protein - Vibrio cholerae >... 44 0.002
gb|AAF19116.1|AF143461_1 (AF143461) BdrC3 [Borrelia hermsii] 44 0.002
gb|AAF19774.1|AF128451_1 (AF128451) repeat motif protein bd... 44 0.002
ref|NP_248322.1| (NC_000909) purine NTPase [Methanococcus j... 43 0.002
ref|NP_603419.1| (NC_003454) Exonuclease SBCC [Fusobacteriu... 43 0.002
pir||S14548 asparagine-rich protein (clone 37C3) - malaria ... 43 0.002
pir||S14556 asparagine-rich protein (clone 18C1) - malaria ... 43 0.002
ref|XP_134754.1| (XM_134754) apolipoprotein A-IV [Mus muscu... 43 0.002
ref|NP_375094.1| (NC_002745) hypothetical protein [Bacterio... 43 0.003
ref|NP_192428.1| (NM_116758) kinesin - like protein [Arabid... 43 0.003
ref|NP_038334.1| (NC_002185) ORF33 [Streptococcus thermophi... 42 0.004
gb|AAF19775.1|AF128452_1 (AF128452) repeat motif protein bd... 42 0.004
ref|NP_473180.1| (NC_000521) predicted using hexExon; MAL3P... 42 0.004
emb|CAB39019.2| (AL034558) hypothetical protein, PFC0315c [... 42 0.004
pir||T14867 interaptin - slime mold (Dictyostelium discoide... 42 0.004
ref|NP_115323.1| (NC_002774) replication-associated protein... 42 0.004
ref|NP_473196.1| (NC_000521) predicted using hexExon; MAL3P... 42 0.004
pir||S33441 EF protein - Streptococcus suis >gi|298032|emb|... 42 0.004
emb|CAB39003.2| (AL034558) Hypothetical protein, PFC0235w [... 42 0.004
emb|CAB62884.1| (AL035475) hypothetical protein, MAL4P2.43 ... 42 0.005
ref|NP_373997.1| (NC_002745) fibrinogen-binding protein A, ... 42 0.005
ref|NP_015530.1| (NC_001148) subtelomerically-encoded DNA h... 42 0.005
ref|NP_371335.1| (NC_002758) fibrinogen-binding protein [St... 42 0.005
gb|AAF50744.1| (AE003565) CG10542 gene product [Drosophila ... 42 0.005
ref|NP_011429.1| (NC_001139) coiled-coil protein involved i... 42 0.005
ref|NP_013033.1| (NC_001144) Hypothetical ORF; Yll067cp [Sa... 42 0.007
ref|NP_212346.1| (NC_001318) B. burgdorferi predicted codin... 42 0.007
gb|AAM43658.1| (AC117177) RACGAP PROTEIN [Dictyostelium dis... 42 0.007
pir||S41539 fibrinogen-binding protein - Staphylococcus aur... 42 0.007
ref|NP_349097.1| (NC_003030) Methyl-accepting chemotaxis pr... 42 0.007
ref|NP_611787.1| (NM_137943) CG3493 gene product [Drosophil... 41 0.009
ref|NP_416433.1| (NC_000913) flagellar biosynthesis; flagel... 41 0.009
emb|CAA37894.1| (X53947) myosin heavy chain type II [Saccha... 41 0.009
gb|AAF46990.2| (AE003460) CG3493-PA [Drosophila melanogaster] 41 0.009
gb|AAD43468.1|AF113609_1 (AF113609) UspA2 [Moraxella catarr... 41 0.009
ref|NP_149321.1| (NC_001988) Hypothetical protein [Clostrid... 41 0.009
ref|NP_663197.1| (NC_004062) hypothetical protein [Phthorim... 41 0.009
ref|NP_478344.1| (NC_003265) ORF1~similar to replication-as... 41 0.009
ref|NP_472985.1| (NC_000910) hypothetical protein [Plasmodi... 41 0.009
gb|AAF32259.1|AF169320_1 (AF169320) flagellin [Escherichia ... 41 0.009
ref|NP_031494.1| (NM_007468) apolipoprotein A-IV [Mus muscu... 41 0.009
emb|CAA35488.1| (X17440) hsg48 [Escherichia coli] 41 0.009
>ref|NP_207906.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||C64659 hypothetical protein HP1115 - Helicobacter pylori (strain 26695)
gb|AAD08165.1| (AE000618) H. pylori predicted coding region HP1115 [Helicobacter
pylori 26695]
Length = 228
Score = 437 bits (1125), Expect = e-122
Identities = 228/228 (100%), Positives = 228/228 (100%)
Query: 1 MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLL 60
MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLL
Sbjct: 1 MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLL 60
Query: 61 SLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA 120
SLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA
Sbjct: 61 SLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA 120
Query: 121 NTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSA 180
NTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSA
Sbjct: 121 NTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSA 180
Query: 181 NNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
NNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH
Sbjct: 181 NNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
>ref|NP_207286.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||A64581 surface-located membrane protein 3 - Helicobacter pylori (strain
26695)
gb|AAD07557.1| (AE000563) H. pylori predicted coding region HP0489 [Helicobacter
pylori 26695]
Length = 295
Score = 423 bits (1088), Expect = e-118
Identities = 220/227 (96%), Positives = 224/227 (97%)
Query: 1 MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLL 60
MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLL
Sbjct: 1 MINYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLL 60
Query: 61 SLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA 120
SLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA
Sbjct: 61 SLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA 120
Query: 121 NTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSA 180
NTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSA
Sbjct: 121 NTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSA 180
Query: 181 NNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSK 227
NNEITANQTQALTNINEAKENANNQITENKTQAITNINEA+ + ++
Sbjct: 181 NNEITANQTQALTNINEAKENANNQITENKTQAITNINEARESATTQ 227
>ref|NP_223759.1| (NC_000921) putative [Helicobacter pylori J99]
pir||D71856 hypothetical protein jhp1042 - Helicobacter pylori (strain J99)
gb|AAD06621.1| (AE001532) putative [Helicobacter pylori J99]
Length = 267
Score = 363 bits (933), Expect = e-100
Identities = 188/226 (83%), Positives = 205/226 (90%)
Query: 2 INYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLS 61
+NYPNLPNSALEI+EQPEVKEITNELLKQLQNAL SN+ FSEQVELSLK IVRILEVLLS
Sbjct: 1 MNYPNLPNSALEISEQPEVKEITNELLKQLQNALRSNAHFSEQVELSLKCIVRILEVLLS 60
Query: 62 LDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNAN 121
LDFFKNANEIDSSLRNSIEWL NAGESLK KMKEYE FFS+FNTSM NEQEV+ TLNAN
Sbjct: 61 LDFFKNANEIDSSLRNSIEWLTNAGESLKLKMKEYERFFSEFNTSMHANEQEVTNTLNAN 120
Query: 122 TENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSAN 181
ENIKSEIKKLENQLIETTTRLLTSYQIFLN ARD+ANNQIT NKT+SLEA+ QAK +AN
Sbjct: 121 AENIKSEIKKLENQLIETTTRLLTSYQIFLNQARDNANNQITKNKTQSLEAITQAKNNAN 180
Query: 182 NEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSK 227
NEI+ NQTQA+TNI EAK NANN+I+ N+TQAITNINEAK + ++
Sbjct: 181 NEISNNQTQAITNITEAKTNANNEISNNQTQAITNINEAKESATTQ 226
>ref|NP_223159.1| (NC_000921) putative [Helicobacter pylori J99]
pir||A71932 hypothetical protein jhp0441 - Helicobacter pylori (strain J99)
gb|AAD06019.1| (AE001478) putative [Helicobacter pylori J99]
Length = 181
Score = 249 bits (636), Expect = 2e-65
Identities = 128/143 (89%), Positives = 136/143 (94%)
Query: 2 INYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLS 61
+NYPNLPNS LEIT+QPEVKEITNELLKQLQNAL+SN+LF+EQVELSLKGIVRILEVLLS
Sbjct: 1 MNYPNLPNSTLEITQQPEVKEITNELLKQLQNALHSNALFTEQVELSLKGIVRILEVLLS 60
Query: 62 LDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNAN 121
LDFFKNANEIDSSLRNSIEWL+NAGESLKTKMKEYE FFS+FNTSM NEQEV+ATLNAN
Sbjct: 61 LDFFKNANEIDSSLRNSIEWLSNAGESLKTKMKEYERFFSEFNTSMHANEQEVTATLNAN 120
Query: 122 TENIKSEIKKLENQLIETTTRLL 144
TENIKSEIKKLENQLIE T LL
Sbjct: 121 TENIKSEIKKLENQLIEETRMLL 143
>emb|CAC95143.1| (AJ416752) variable membrane protein [Mycoplasma hominis]
Length = 1404
Score = 60.1 bits (144), Expect = 2e-08
Identities = 69/253 (27%), Positives = 115/253 (45%), Gaps = 45/253 (17%)
Query: 6 NLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFF 65
NL +S EI Q E+TNE+ K Q ++N+ E SL + +I EV LD F
Sbjct: 674 NLTDSDGEI--QQAKAELTNEIEKANQTIASNNTALMENSNTSL--LNKISEVQNKLDKF 729
Query: 66 KNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQ-EVSATL-----N 119
N + + N ++ L N + + K K E +S FN N+ ++ +L +
Sbjct: 730 NNDKKAEF---NKLQELKNKIDDFEKKNKNNE-IYSKFNLDELINKSVQIKNSLGSINES 785
Query: 120 ANTENIKSEIKKLENQLIETTTRLLT----SYQIF------LNN----------ARDSAN 159
+N ++I KK+++ L E ++ ++Q F L N D AN
Sbjct: 786 SNKKDIVDANKKMQDALNELQAKMAEIHKKTFQEFNEHKNELENLIKKEDAKEVGTDEAN 845
Query: 160 NQITANK----------TESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITEN 209
IT N T++ +AL++AK+ + +I + L ++NE+KE NN IT +
Sbjct: 846 TAITNNDVKENSSIEEITKATKALDEAKSKLDQKINTQKATELNSLNESKEKLNNLITSS 905
Query: 210 KTQ-AITNINEAK 221
Q + I++AK
Sbjct: 906 SNQVSAEEISKAK 918
Score = 47.0 bits (110), Expect = 2e-04
Identities = 47/215 (21%), Positives = 102/215 (46%), Gaps = 23/215 (10%)
Query: 19 EVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNS 78
++ E EL Q+ NA N E+ + L +++ E+ D K A+E + L+N+
Sbjct: 177 KINEAKKELQSQINNARNQEKEVFEEKKQQLNKLIKSNEI----DNSKKADET-AILKNT 231
Query: 79 IEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQE-----VSATLNANTENIKSEIKKLE 133
+ ++ ++++TK KE E + ++E V A + ++ +K I +
Sbjct: 232 NVVVGDSIKTIETKTKEIEKAIESLTNKINEFKKEQEKANVKAVFSKKSKQLKDLIDSED 291
Query: 134 NQLIETT--TRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQA 191
+ ++++ +++LT +I N++ + N KT+ +E ++ T+ N+ +
Sbjct: 292 GKKVDSSNESQVLTKTKIDENSSIEDIQN-----KTKDIEKAIESLTNKINDQKQQKNML 346
Query: 192 LTNINEAKE------NANNQITENKTQAITNINEA 220
IN+AKE +++++I + KTQ I +A
Sbjct: 347 NEVINKAKELVKKLVDSDSEIQQAKTQLDQEIQKA 381
>ref|NP_472958.1| (NC_000910) hypothetical protein [Plasmodium falciparum]
pir||C71622 hypothetical protein PFB0145c - malaria parasite (Plasmodium
falciparum)
gb|AAC71819.1| (AE001375) hypothetical protein [Plasmodium falciparum 3D7]
Length = 1979
Score = 53.9 bits (128), Expect = 1e-06
Identities = 49/192 (25%), Positives = 84/192 (43%), Gaps = 27/192 (14%)
Query: 12 LEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEI 71
+E E E+ +I + L QLQ N+ Q+E +S++ K E
Sbjct: 485 IETQELQEMVDIKQKELDQLQEKYNA------QIES------------ISIELSKKEKEY 526
Query: 72 DSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKK 131
+ IE +NN E L+ KEY +++ + ++ LN N + + ++I
Sbjct: 527 NQYKNTYIEEINNLNEKLEETNKEYTNLQNNYTNEINMLNNDIH-MLNGNIKTMNTQIST 585
Query: 132 LENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEIT--ANQT 189
L+N + LL LNN + + N++I+ + ++ L + K NN+I +NQ
Sbjct: 586 LKNDV-----HLLNEQIDKLNNEKGTLNSKISELNVQIMD-LKEEKDFLNNQIVDLSNQI 639
Query: 190 QALTNINEAKEN 201
LT E KEN
Sbjct: 640 DLLTRKMEEKEN 651
>dbj|BAB63727.1| (AP003294) putative myosin heavy chain-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 1762
Score = 52.8 bits (125), Expect = 3e-06
Identities = 47/210 (22%), Positives = 94/210 (44%), Gaps = 14/210 (6%)
Query: 29 KQLQNALN-SNSLFSEQVELSLKGIVRIL-EVLLSLDFFKNANEIDSSLRNSIEWLNNAG 86
++L N++N +E+ E+ + + L E+ + K + L + I L G
Sbjct: 916 EELMNSMNIERGAAAEEKEMLVSEHSKCLTELEKAQSSVKELESTNGDLNDKIAVLQKEG 975
Query: 87 ESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQL--IETTTRLL 144
SL +++++ E F + + +++S + N E ++ L+N+L ++
Sbjct: 976 SSLASELQQLEASFKNLGNDLEQKFEQISV-MQKNNEELELANSNLQNELAMVQEQKNEA 1034
Query: 145 TSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQ---ALTNINEAKEN 201
+ + L N + N QI+ N E++E L AKT NE+T Q + AL + + + N
Sbjct: 1035 VASTVELGNKLEEQNQQIS-NLQEAVENLEAAKTDMYNELTVCQEEKNAALLQVQQLEAN 1093
Query: 202 ANNQITE-----NKTQAITNINEAKNQSLS 226
N +E ++ A+ NE + +S
Sbjct: 1094 LKNLESELEQKQSQVSALEQANEELREKIS 1123
Score = 52.8 bits (125), Expect = 3e-06
Identities = 48/202 (23%), Positives = 95/202 (46%), Gaps = 10/202 (4%)
Query: 29 KQLQNALN--SNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNAG 86
++L N++N + E+ L K + E+ + K + L + I L N
Sbjct: 657 EELMNSMNIERGAAAEEKEMLVSKHSKCLTELEKAQSSVKELESTNGDLNDKIAVLQNEK 716
Query: 87 ESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQL--IETTTRLL 144
SL +++++ E F + + + +S ++ N E+++ L+N L ++
Sbjct: 717 NSLSSELQQLEASFENLGNDLEQELERISI-MHKNNEDLELVNSNLQNDLATVQGQKNEA 775
Query: 145 TSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANN 204
+ + L N + N QI+ N E++E L AKT+ NE+T +Q + T ++ E A
Sbjct: 776 VASTLELGNKLEEKNQQIS-NLQEAVENLEAAKTNMYNEVTVHQ-EKCTFLSSQLEKA-- 831
Query: 205 QITENKTQA-ITNINEAKNQSL 225
Q+ E + Q ++ I + KN++L
Sbjct: 832 QLAEKEVQTLLSEIEKMKNENL 853
>pir||T28677 rhoptry protein - Plasmodium yoelii
gb|AAA21304.1| (L27838) rhoptry protein [Plasmodium yoelii]
Length = 2269
Score = 49.3 bits (116), Expect = 3e-05
Identities = 55/230 (23%), Positives = 103/230 (43%), Gaps = 32/230 (13%)
Query: 20 VKEITNELLK---QLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSL- 75
+KEI ++++K Q+ N S +E + L + I ++ E + S+ F E DS++
Sbjct: 1855 LKEIYHDIVKYKRQIDEIENITSEENENITLYIDTITKLKEKVQSILNFVTTYENDSNII 1914
Query: 76 RNSIEWLNNAG-----ESLKTKMKEYEGFFSDFN--------TSMRTNEQEVSATLNANT 122
+ I+ N ESLKT ++ ++ + N + N +T++ +
Sbjct: 1915 KQHIQDTNENDVSKIKESLKTTIQSFQEILNKINGIKAQFYDNNNINNINNTISTISQDV 1974
Query: 123 ENIKSEIKK---LENQLIETTTRLL----TSYQIFLNNARDSANNQITANKTESLEALNQ 175
++K I K +EN+LIE L ++Y+I R + NN + + + N+
Sbjct: 1975 NDVKKHISKDLTIENELIEIQKSLEDIKNSTYEI-----RGANNNYVNTIRNYVEQQTNK 2029
Query: 176 AKTSANNEITANQTQALTNINEAKENANNQITENK---TQAITNINEAKN 222
+ ++N + + Q + N N+ E IT NK T I+ IN+ N
Sbjct: 2030 IQNNSNKDEIDDIIQKILNYNKESETKLPTITGNKNNVTSIISRINKVIN 2079
>sp|P39922|MYS3_HYDAT Myosin heavy chain, clone 203
gb|AAA29216.1| (L35595) myosin heavy chain [Hydra vulgaris]
Length = 539
Score = 47.4 bits (111), Expect = 1e-04
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 73 SSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKL 132
S L N+ E L + L+ K++E + + NE+++ + ++S I++L
Sbjct: 291 SDLENAKEGLESQISQLQRKIQELLAKIEELEEELE-NERKLRQKSELQRKELESRIEEL 349
Query: 133 ENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQAL 192
++QL T TS Q+ + R++ N++ + +EALN A +A + I A +
Sbjct: 350 QDQL--ETAGGATSAQVEVGKKREAECNRLR----KEIEALNIANDAAISAIKAKTNATI 403
Query: 193 TNI---NEAKENANNQITENKTQAITNINEAKN 222
I NEA + A ++ + K+ +NE KN
Sbjct: 404 AEIQEENEAMKKAKAKLEKEKSALNNELNETKN 436
>pir||JC6009 surface-located membrane protein lmp3 precursor - Mycoplasma
hominis
emb|CAA64858.1| (X95601) Lmp3 protein [Mycoplasma hominis]
Length = 1302
Score = 46.6 bits (109), Expect = 2e-04
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 34/247 (13%)
Query: 9 NSALEITEQPEVKEIT---NELLKQLQNA-LNSNSLFSEQVELSLKGIV----------- 53
NS I + +KEI N L+K + A L L + ++ +LK +
Sbjct: 287 NSLNGINKNSTIKEIKAGQNALIKAKEEAGLEKEKLDGQNIKDTLKETINNAKEFKKLLI 346
Query: 54 ----RILEVLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRT 109
+I+++ +LD ++ + SL E + +A + L TK+ EY+ + FN
Sbjct: 347 DNDQKIVDLKSNLD--NEISKAEQSLSKDKESMESANDLLNTKLIEYKEILNKFNQEKEA 404
Query: 110 NEQEVSATLNANTEN-IKSEIKKLEN--QLIETTTRLLTSYQIFLNNARDS----ANN-- 160
E+ T N EN + E+K N L++ T + + N++ S AN
Sbjct: 405 KFNELEQT-RKNIENFLTDEVKNNPNYATLVKDLTNAKDAKKSVTNSSNKSDIIAANEAL 463
Query: 161 -QITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANN--QITENKTQAITNI 217
Q A+ ++ + +++A S ++ A +A T + + +N + + E+ ITN
Sbjct: 464 IQALADANKAKDQVDEANKSIKEQLNALIDKANTLLPQLNDNDSEIVKAKESLNAEITNA 523
Query: 218 NEAKNQS 224
N+A NQ+
Sbjct: 524 NKAVNQN 530
>ref|NP_374548.1| (NC_002745) hypothetical protein, similar to streptococcal adhesin
emb [Staphylococcus aureus subsp. aureus N315]
dbj|BAB42527.1| (AP003133) ORFID:SA1267~hypothetical protein, similar to
streptococcal adhesin emb [Staphylococcus aureus subsp.
aureus N315]
Length = 6713
Score = 46.6 bits (109), Expect = 2e-04
Identities = 51/212 (24%), Positives = 87/212 (40%), Gaps = 20/212 (9%)
Query: 21 KEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIE 80
K + + +N LN NS + + ++ +L+ N + S+ +I
Sbjct: 532 KTAYTQAVTNAENILNKNSGSNLDKAAVENALSQVTNAKGALNGNHNLEQAKSNANTTIN 591
Query: 81 WLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIK-----KLENQ 135
L + + K K+K+ N + + + TLN +++ I+ K
Sbjct: 592 GLQHLTTAQKDKLKQQVQQAQ--NVAGVDTVKSSANTLNGAMGTLRNSIQDNTATKNGQN 649
Query: 136 LIETTTRLLTSYQIFLNNARDSANNQI--TANKTESLEALNQAKTSANNEITANQTQALT 193
++ T R T+Y NNA DSAN I T+N A+NQ T + T N
Sbjct: 650 YLDATERNKTNY----NNAVDSANGVINATSNPNMDANAINQIATQVTS--TKNALDGTH 703
Query: 194 NINEAKENANNQITENKTQAITNINEAKNQSL 225
N+ +AK+ A N I TN+N+A+ +L
Sbjct: 704 NLTQAKQTATNAI-----DGATNLNKAQKDAL 730
>ref|NP_371958.1| (NC_002758) hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
dbj|BAB57596.1| (AP003362) hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
Length = 6713
Score = 46.6 bits (109), Expect = 2e-04
Identities = 51/212 (24%), Positives = 87/212 (40%), Gaps = 20/212 (9%)
Query: 21 KEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIE 80
K + + +N LN NS + + ++ +L+ N + S+ +I
Sbjct: 532 KTAYTQAVTNAENILNKNSGSNLDKAAVENALSQVTNAKGALNGNHNLEQAKSNANTTIN 591
Query: 81 WLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIK-----KLENQ 135
L + + K K+K+ N + + + TLN +++ I+ K
Sbjct: 592 GLQHLTTAQKDKLKQQVQQAQ--NVAGVDTVKSSANTLNGAMGTLRNSIQDNTATKNGQN 649
Query: 136 LIETTTRLLTSYQIFLNNARDSANNQI--TANKTESLEALNQAKTSANNEITANQTQALT 193
++ T R T+Y NNA DSAN I T+N A+NQ T + T N
Sbjct: 650 YLDATERNKTNY----NNAVDSANGVINATSNPNMDANAINQIATQVTS--TKNALDGTH 703
Query: 194 NINEAKENANNQITENKTQAITNINEAKNQSL 225
N+ +AK+ A N I TN+N+A+ +L
Sbjct: 704 NLTQAKQTATNAI-----DGATNLNKAQKDAL 730
>emb|CAB62885.1| (AL035475) hypothetical protein, MAL4P2.44 [Plasmodium falciparum
3D7]
Length = 1570
Score = 46.6 bits (109), Expect = 2e-04
Identities = 51/225 (22%), Positives = 92/225 (40%), Gaps = 18/225 (8%)
Query: 9 NSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEV--LLSLDFFK 66
NS + + + N +K L N N N++ + ++ + + V + +++
Sbjct: 1123 NSMKNMNNMKNMNNMNN--MKNLNNMNNMNNMNNMNNMNNMNNMNNMNNVNNMNNVNNVN 1180
Query: 67 NANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIK 126
N N ++++ NSI +NN + T + + +TS N + N N N
Sbjct: 1181 NMNSMNNNNSNSINHINNNYLNHLTNNLSHHNNHMNHHTS---NLNHIKGYTNDNYSN-N 1236
Query: 127 SEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTS---ANNE 183
SEI + E + I LN+ +++NN + N + +N+ S NN
Sbjct: 1237 SEISQPMKDKKENLNSM-----ILLND--NNSNNGSSNNYYSKINYINKTDGSFNPPNNN 1289
Query: 184 ITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
I +N + NIN N NN + + NIN N +L+ H
Sbjct: 1290 INSNSNNNIININNNNNNINNNNNNSNISSSANININNNGNLNNH 1334
>ref|NP_488975.1| (NC_003272) unknown protein [Nostoc sp. PCC 7120]
dbj|BAB76634.1| (AP003598) ORF_ID:all4935~unknown protein [Nostoc sp. PCC 7120]
Length = 661
Score = 46.2 bits (108), Expect = 3e-04
Identities = 46/158 (29%), Positives = 65/158 (41%), Gaps = 15/158 (9%)
Query: 67 NANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIK 126
N N ++L + NNA +L T ++ +T+ R Q A N +
Sbjct: 186 NRNNAQNALNTATNNRNNAQNALNTATNNRNNAQAEVDTATRNLAQ-------ARRGNSQ 238
Query: 127 SEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKT--SANNEI 184
I+ N L + TRL T+ N A ++A N T A N T +A N
Sbjct: 239 KAIQNAINALNQANTRLNTA-----NTALNTATNNFNTANTAFNTANNNFSTANTAFNTA 293
Query: 185 TANQTQALTNINEAKENANNQITENKTQAITNINEAKN 222
T N + A T +N A N N I E QA T +N A+N
Sbjct: 294 TNNFSTANTALNTATNNFNTAIAE-LDQANTRLNTARN 330
Score = 44.7 bits (104), Expect = 8e-04
Identities = 46/156 (29%), Positives = 63/156 (39%), Gaps = 25/156 (16%)
Query: 69 NEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSE 128
N +++L + N A + T + + FNT+ N + LN T N +
Sbjct: 256 NTANTALNTATNNFNTANTAFNTANNNFSTANTAFNTATN-NFSTANTALNTATNNFNTA 314
Query: 129 IKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQ 188
I +L+ + TRL N AR+ N TAN S N+ T+ NN TAN
Sbjct: 315 IAELD----QANTRL--------NTARNDFN---TANSNFSRTG-NELNTATNNFNTANN 358
Query: 189 T--QALTNINEAK------ENANNQITENKTQAITN 216
T A TN N A E A NQ+ E I N
Sbjct: 359 TFNTATTNFNNASSRRNTAEQARNQVREETRLTIEN 394
Score = 44.7 bits (104), Expect = 8e-04
Identities = 41/154 (26%), Positives = 63/154 (40%), Gaps = 11/154 (7%)
Query: 72 DSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKK 131
+ L I N A +++ E F+ + +T + ++ N N N ++ +
Sbjct: 68 EDDLSGIIRSTNRAKSDANSRLNRAEQDFTQADAGFQTAQTALNTATN-NRNNAQNALNT 126
Query: 132 LENQLIETTTRLLTSYQIFLNNARDSANNQI---TANKTESLEALNQAKTSANNEITANQ 188
N L T+ N RD+A N + T N+ + ALN A + NN A
Sbjct: 127 ATNNRNNAQNALNTA-----TNNRDNAQNALNTATNNRNNAQNALNTATNNRNNAQNALN 181
Query: 189 TQALTNINEAKENANNQITENKTQAITNINEAKN 222
T A N N A +NA N T N+ A +N A N
Sbjct: 182 T-ATNNRNNA-QNALNTATNNRNNAQNALNTATN 213
Score = 42.7 bits (99), Expect = 0.003
Identities = 53/218 (24%), Positives = 81/218 (36%), Gaps = 20/218 (9%)
Query: 17 QPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLR 76
Q +KE E +K+ Q A ++ ++ E L GI+R S D N +
Sbjct: 44 QVAIKEAP-EAIKKAQEAADA----LKKAEDDLSGIIRSTNRAKS-DANSRLNRAEQDFT 97
Query: 77 NSIEWLNNAGESLKTKMKEYEGFFSDFNTSM--RTNEQEVSATLNANTENIKSEIKKLEN 134
+ A +L T + NT+ R N Q T N +N ++ + N
Sbjct: 98 QADAGFQTAQTALNTATNNRNNAQNALNTATNNRNNAQNALNTATNNRDNAQNALNTATN 157
Query: 135 QLIETTTRLLTSYQIFLNNARDSAN--NQITANKTESLEALNQAKTSAN------NEITA 186
L T+ NN ++ N N T N+ + ALN A + N N T
Sbjct: 158 NRNNAQNALNTA----TNNRNNAQNALNTATNNRNNAQNALNTATNNRNNAQNALNTATN 213
Query: 187 NQTQALTNINEAKENANNQITENKTQAITNINEAKNQS 224
N+ A ++ A N N +AI N A NQ+
Sbjct: 214 NRNNAQAEVDTATRNLAQARRGNSQKAIQNAINALNQA 251
>ref|NP_078280.1| (NC_002162) unique hypothetical membrane lipoprotein [Ureaplasma
urealyticum]
pir||A82889 hypothetical protein UU443 [imported] - Ureaplasma urealyticum
gb|AAF30855.1|AE002141_1 (AE002141) unique hypothetical membrane lipoprotein [Ureaplasma
urealyticum]
Length = 628
Score = 46.2 bits (108), Expect = 3e-04
Identities = 51/229 (22%), Positives = 95/229 (41%), Gaps = 25/229 (10%)
Query: 19 EVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDF-----FKNANEIDS 73
++K +TN+LL LQN L + + E S+ ++ I++ L D+ + I
Sbjct: 295 QIKSLTNKLLNDLQNYLQGLNTIALDSENSINKLISIIQSLKPDDYNPYYSIEKQQNIQK 354
Query: 74 SLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRT--NEQEVSATLNANTENIKSEIKK 131
NS + N E+ ++ FS FNT+ T + ++ L E+ ++I
Sbjct: 355 DKNNSSKATYNGLENQIENLQSIISLFS-FNTNSLTIDSANNLNNELTKKFEDANTKISS 413
Query: 132 LENQLIETTTRLLTSYQIF---------LNNARDSANNQI-TANKTESL-EALNQAK--- 177
+ +Q+ +T +F N +S N+Q NKT+++ + LN K
Sbjct: 414 IVDQIKQTILSNFKKTYLFKDFIKHLKEFNTKVNSENDQAKKTNKTQTIQDVLNSYKNDP 473
Query: 178 ---TSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQ 223
T + +++ANQT + N+ +N + I + NQ
Sbjct: 474 WINTKVSLKLSANQTLTIDNLENIDLAYSNDFLLKPKELINYLKLDNNQ 522
>ref|NP_663211.1| (NC_004062) hypothetical protein [Phthorimaea operculella
granulovirus]
gb|AAM70244.1| (AF499596) hypothetical protein [Phthorimaea operculella
granulovirus]
Length = 810
Score = 45.8 bits (107), Expect = 4e-04
Identities = 39/165 (23%), Positives = 75/165 (44%), Gaps = 10/165 (6%)
Query: 69 NEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSE 128
N SS + E + + T+ S+ N S TN+ E + A +E+
Sbjct: 465 NTTQSSFNPNTESTTQSSFNPNTQSTNQSNLNSNTNQSESTNQSESTNQSIAQSESTNQS 524
Query: 129 IKKLE--NQLI---ETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNE 183
I + E NQ I E+T R + N + S+N + T N++ + E+ NQ+ ++ N
Sbjct: 525 IAQSESTNQSIAQSESTNRSIAQSNQSTNRSIQSSNQEST-NRSTNQESTNQSDSTTNQS 583
Query: 184 ITANQTQALTNINEAKENANNQ----ITENKTQAITNINEAKNQS 224
+ N++++ + + ++ NQ E++ Q+ +NE NQ+
Sbjct: 584 ESTNRSESTNQESTNQSDSTNQNQSLNIESRNQSTLQLNENTNQN 628
>pir||T18372 repeat organellar protein - Plasmodium chabaudi
gb|AAC63403.1| (U43145) repeat organellar protein [Plasmodium chabaudi]
Length = 1939
Score = 45.8 bits (107), Expect = 4e-04
Identities = 49/229 (21%), Positives = 91/229 (39%), Gaps = 28/229 (12%)
Query: 14 ITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDS 73
+ E E + NE+++ L +N E++E+S + +++E+L S E +
Sbjct: 223 LRELKEFMKEKNEIIESLDGTINDKKNAYEKLEISFEEKRKMIEMLDS-----KLIEKEE 277
Query: 74 SLRNSIEWLNNAGESLKTKMKEYEGFFSDFNT------SMRTNEQEVSATLNANT---EN 124
+ N L E + K+K+ E DF + SM + + L+ N E
Sbjct: 278 NFANKQAKLEKENEIIIEKLKDIESREKDFKSKEEKFASMENELNTLKSDLSKNACQMEV 337
Query: 125 IKSEIKKLENQLIETTTRLL---TSYQIFLNNARD--------SANNQITANKTESLEAL 173
K EIK L L+E + Y +NN ++ +N + ++ E + L
Sbjct: 338 YKLEIKDLSQSLVEKEREIFEIKNEYDDKINNMKEKLSSINDKGIDNTVLHSEEEKINKL 397
Query: 174 NQAKTSANNEITANQTQALTNINEAKENANNQITENK---TQAITNINE 219
+ K + NEI + I ++ +NK T +TN+ +
Sbjct: 398 LKEKETELNEIHKKYNLEIETIKNELNEKEEELEKNKKAHTVEVTNLTK 446
>emb|CAC03101.1| (X53024) erythrocyte membrane-associated antigen [Plasmodium
falciparum]
Length = 328
Score = 45.4 bits (106), Expect = 5e-04
Identities = 50/244 (20%), Positives = 95/244 (38%), Gaps = 26/244 (10%)
Query: 2 INYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLS 61
+N N N E+ EV E+ N +NS + +E E++ + + + +
Sbjct: 82 VNQVNEVNEVNEVNMVNEVNELNEVNNVNAVNEVNSVNEVNEMNEVNKVNELNEVNEVNN 141
Query: 62 LDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNE-QEVSATLNA 120
++ N NE+ N++ +NN E + ++ N + NE EV+
Sbjct: 142 VNEVNNVNEV-----NNVNEMNNMNEMNNVNVVNEVNNVNEMNNTNELNEVNEVNNVNEV 196
Query: 121 NTENIKSEIKKLE-----NQL--IETTTRLLTSYQIFLNNARDSANNQITANKTESLEAL 173
N N+ +E+ + N+L + + + + N D+ N N+ + +
Sbjct: 197 NDVNVVNEVNNVNEMNNMNELNEVNEVNNVNEVNDVNVVNEVDNVNEMNNMNELNEVNGV 256
Query: 174 NQA-KTSANNEIT-------ANQTQALTNINEAKE-NANNQITE----NKTQAITNINEA 220
N+ T+ NE+ N + N+NE E N N + E N + N+NE
Sbjct: 257 NEVHNTNEINEMNNVNVVNEVNNVNEMNNMNELNEVNEVNNVNEVNDVNVVNEVNNVNEM 316
Query: 221 KNQS 224
N +
Sbjct: 317 NNMN 320
>pir||S23693 erythrocyte membrane-associated antigen (clone pPf K19) -
Plasmodium falciparum (fragment)
Length = 332
Score = 45.4 bits (106), Expect = 5e-04
Identities = 50/244 (20%), Positives = 95/244 (38%), Gaps = 26/244 (10%)
Query: 2 INYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLS 61
+N N N E+ EV E+ N +NS + +E E++ + + + +
Sbjct: 84 VNQVNEVNEVNEVNMVNEVNELNEVNNVNAVNEVNSVNEVNEMNEVNKVNELNEVNEVNN 143
Query: 62 LDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNE-QEVSATLNA 120
++ N NE+ N++ +NN E + ++ N + NE EV+
Sbjct: 144 VNEVNNVNEV-----NNVNEMNNMNEMNNVNVVNEVNNVNEMNNTNELNEVNEVNNVNEV 198
Query: 121 NTENIKSEIKKLE-----NQL--IETTTRLLTSYQIFLNNARDSANNQITANKTESLEAL 173
N N+ +E+ + N+L + + + + N D+ N N+ + +
Sbjct: 199 NDVNVVNEVNNVNEMNNMNELNEVNEVNNVNEVNDVNVVNEVDNVNEMNNMNELNEVNGV 258
Query: 174 NQA-KTSANNEIT-------ANQTQALTNINEAKE-NANNQITE----NKTQAITNINEA 220
N+ T+ NE+ N + N+NE E N N + E N + N+NE
Sbjct: 259 NEVHNTNEINEMNNVNVVNEVNNVNEMNNMNELNEVNEVNNVNEVNDVNVVNEVNNVNEM 318
Query: 221 KNQS 224
N +
Sbjct: 319 NNMN 322
>ref|NP_593009.1| (NC_003424) hypothetical coiled-coil protein [Schizosaccharomyces
pombe]
sp|Q10411|YD86_SCHPO Hypothetical protein C1F3.06c in chromosome I
pir||T38077 hypothetical coiled-coil protein - fission yeast
(Schizosaccharomyces pombe)
emb|CAA94624.1| (Z70690) hypothetical coiled-coil protein [Schizosaccharomyces
pombe]
Length = 1957
Score = 45.4 bits (106), Expect = 5e-04
Identities = 59/235 (25%), Positives = 108/235 (45%), Gaps = 24/235 (10%)
Query: 9 NSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNA 68
NS LE E E+KE + QL +A + S F EQ SLKG + + LS K
Sbjct: 366 NSQLE-EEMVELKESNRTIHSQLTDAESKLSSF-EQENKSLKGSIDEYQNNLSSKD-KMV 422
Query: 69 NEIDSSLRNS----------IEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEV---S 115
++ S L + + +N+ + K+K++E D + ++ E+ S
Sbjct: 423 KQVSSQLEEARSSLAHATGKLAEINSERDFQNKKIKDFEKIEQDLRACLNSSSNELKEKS 482
Query: 116 ATLNANTE---NIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEA 172
A ++ + N++ +IK+ + ++ E+T L S Q + N + +++ ++ L+
Sbjct: 483 ALIDKKDQELNNLREQIKE-QKKVSESTQSSLQSLQRDILN--EKKKHEVYESQLNELKG 539
Query: 173 LNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSK 227
Q + S N+E ++Q L EA NN+++E+K T N A + L+K
Sbjct: 540 ELQTEIS-NSEHLSSQLSTLAAEKEAAVATNNELSESKNSLQTLCN-AFQEKLAK 592
>gb|EAA14712.1| (AAAB01008984) ebiP5315 [Anopheles gambiae str. PEST]
Length = 1606
Score = 45.4 bits (106), Expect = 5e-04
Identities = 50/204 (24%), Positives = 94/204 (45%), Gaps = 34/204 (16%)
Query: 26 ELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNA 85
EL KQLQ + N +Q+E + EVL+S +L+N ++ LN +
Sbjct: 653 ELRKQLQTSEQENLAKDKQLEEN--------EVLVS------------ALQNELKELNVS 692
Query: 86 GESLKTKMKEYEGFFSDFNTSMRTNEQEVSA---TLNANTENIKSEIKKLENQLIETTTR 142
SL ++ + F+D + ++ QE +A L + + + S++K+LE L
Sbjct: 693 KASLNQELTAIKASFADKDGTLANILQEKTALEKQLEESKQELASKVKQLEEDLRNREDT 752
Query: 143 LLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENA 202
L ++ + +A Q++A K E L L+QA+ ++ Q Q + ++++ + A
Sbjct: 753 LRKELEL----SASTAQQQLSA-KEEELTRLSQAREELQKQLETAQ-QQMKDVSDKMKQA 806
Query: 203 NNQITENKTQAITNINEAKNQSLS 226
+ I TN +++ NQ LS
Sbjct: 807 EDTIATQ-----TNESQSLNQQLS 825
>pir||C40892 apolipoprotein A-IV precursor - mouse
Length = 399
Score = 45.1 bits (105), Expect = 6e-04
Identities = 45/237 (18%), Positives = 90/237 (36%), Gaps = 17/237 (7%)
Query: 4 YPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLD 63
+ +L N+A E EQ + ++T +L Q+ L S +++ V L V V LS
Sbjct: 35 FTHLSNNAKEAAEQFQKTDVTQQLSTLFQDKLGDASTYADGVRNKLVPFV----VQLSGH 90
Query: 64 FFKNANEIDSSLRNSIEWLNNA------------GESLKTKMKEYEGFFSDFNTSMRTNE 111
K + ++ +E L + GE+++ + + + D + T
Sbjct: 91 LAKETERVKEEIKKELEDLRDRMMPHANKVTQTFGENMQKLQEHLKPYAVDLQDQINTQT 150
Query: 112 QEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLE 171
QE+ L + +++ IK+ + L + L T+ + N + +T E
Sbjct: 151 QEMKLQLTPYIQRMQTTIKENVDNLHTSMMPLATNLKDKFNRNMEELKGHLTPRANELKA 210
Query: 172 ALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
++Q + +N E Q+ +N + T ++ AK L K+
Sbjct: 211 TIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVS-AKIDQLQKN 266
>gb|AAK40230.1|AF356600_1 (AF356600) filament-interacting protein [Dictyostelium discoideum]
Length = 2038
Score = 45.1 bits (105), Expect = 6e-04
Identities = 57/244 (23%), Positives = 100/244 (40%), Gaps = 28/244 (11%)
Query: 3 NYPNLPNSALEIT-EQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIV----RILE 57
NYP++ N + T +K+ T + + Q N +S ++ S K I +IL+
Sbjct: 55 NYPSIYNEIINTTTNMSTIKKTTIDCIANFQTTTNKQLSWSNLIQ-SCKNIANETYKILK 113
Query: 58 VLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSM---------- 107
V+ D K + + +N + NN +E+ GF N ++
Sbjct: 114 VIYDADI-KRLKHLIETCKNQFK--NNENSFGMIDREEFNGFGELVNQTISNLIEYSSCL 170
Query: 108 --RTNEQEVSATL-NANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITA 164
+ E ++S+ L N ++ +I KL QL+E RL+ ++ D + Q
Sbjct: 171 EVKAKENQLSSPLQNQFIDDDDDDIIKLSQQLVEDANRLIDIVNDIFSDLDDPSQKQKFI 230
Query: 165 NKTESLEALNQAKTSANNEITANQTQAL---TNINE-AKENANNQITENKTQAITNINEA 220
N SL LNQ + N T + T +L TN+N + +Q + + + I N N
Sbjct: 231 NHQNSL--LNQLNHTFNLIQTNSPTLSLPEFTNVNNYIQSPIPSQYSTSNIKTIYNDNNN 288
Query: 221 KNQS 224
N +
Sbjct: 289 SNNN 292
>gb|AAA37216.1| (M64250) apolipoprotein A-IV [Mus musculus castaneus]
Length = 435
Score = 45.1 bits (105), Expect = 6e-04
Identities = 45/237 (18%), Positives = 90/237 (36%), Gaps = 17/237 (7%)
Query: 4 YPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLD 63
+ +L N+A E EQ + ++T +L Q+ L S +++ V L V V LS
Sbjct: 35 FTHLSNNAKEAAEQFQKTDVTQQLSTLFQDKLGDASTYADGVRNKLVPFV----VQLSGH 90
Query: 64 FFKNANEIDSSLRNSIEWLNNA------------GESLKTKMKEYEGFFSDFNTSMRTNE 111
K + ++ +E L + GE+++ + + + D + T
Sbjct: 91 LAKETERVKEEIKKELEDLRDRMMPHANKVTQTFGENMQKLQEHLKPYAVDLQDQINTQT 150
Query: 112 QEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLE 171
QE+ L + +++ IK+ + L + L T+ + N + +T E
Sbjct: 151 QEMKLQLTPYIQRMQTTIKENVDNLHTSMMPLATNLKDKFNRNMEELKGHLTPRANELKA 210
Query: 172 ALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
++Q + +N E Q+ +N + T ++ AK L K+
Sbjct: 211 TIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVS-AKIDQLQKN 266
>sp|P06728|APA4_MOUSE APOLIPOPROTEIN A-IV PRECURSOR (APO-AIV)
pir||A40892 apolipoprotein A-IV precursor - mouse (strain C57BL16)
gb|AAA37215.1| (M64249) apolipoprotein A-IV [Mus musculus]
Length = 395
Score = 44.7 bits (104), Expect = 8e-04
Identities = 45/237 (18%), Positives = 89/237 (36%), Gaps = 17/237 (7%)
Query: 4 YPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLD 63
+ L N+A E EQ + ++T +L Q+ L S +++ V L V V LS
Sbjct: 35 FTQLSNNAKEAVEQFQKTDVTQQLSTLFQDKLGDASTYADGVHNKLVPFV----VQLSGH 90
Query: 64 FFKNANEIDSSLRNSIEWLNNA------------GESLKTKMKEYEGFFSDFNTSMRTNE 111
K + ++ +E L + GE+++ + + + D + T
Sbjct: 91 LAKETERVKEEIKKELEDLRDRMMPHANKVTQTFGENMQKLQEHLKPYAVDLQDQINTQT 150
Query: 112 QEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLE 171
QE+ L + +++ IK+ + L + L T+ + N + +T E
Sbjct: 151 QEMKLQLTPYIQRMQTTIKENVDNLHTSMMPLATNLKDKFNRNMEELKGHLTPRANELKA 210
Query: 172 ALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
++Q + +N E Q+ +N + T ++ AK L K+
Sbjct: 211 TIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVS-AKIDQLQKN 266
>ref|NP_112550.1| (NM_031260) Moloney leukemia virus 10-like 1 [Mus musculus]
gb|AAK31966.1|AF285587_1 (AF285587) MOV10-like 1 [Mus musculus]
Length = 1187
Score = 44.7 bits (104), Expect = 8e-04
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 31/175 (17%)
Query: 85 AGESLKTKMKEYEGFFSDF-NTSMRTNEQEVSATLNANTENIKS----EIKKLEN----- 134
AG+ L K +EY G ++ M +E++V+ LN E + + +++ N
Sbjct: 522 AGDKLILKSQEYNGHVIEYIGYVMEIHEEDVTLKLNPGFEQMYNFEPMDVEFTYNRTTSR 581
Query: 135 -------QLIETTTRLLTSYQIFLNNARDSAN---NQITANKTESLEALNQAKTSANNEI 184
Q+I ++L +I L + + + N Q T N +S+ + + + ++
Sbjct: 582 RCHYALEQVIHLGVKVLFPEEIILQSPQVTGNWSLAQDTKNDGQSITNITRNDGQSMTKV 641
Query: 185 TANQTQALTNI--NEAKENAN---------NQITENKTQAITNINEAKNQSLSKH 228
T N +Q++TNI N+ + N ++T N +Q+ITNI Q ++K+
Sbjct: 642 TRNDSQSITNIIRNDGQSITNVTRNDGQPITKVTRNNSQSITNITRNDGQPITKN 696
>ref|XP_122853.1| (XM_122853) Moloney leukemia virus 10-like 1 [Mus musculus]
Length = 1187
Score = 44.7 bits (104), Expect = 8e-04
Identities = 41/175 (23%), Positives = 80/175 (45%), Gaps = 31/175 (17%)
Query: 85 AGESLKTKMKEYEGFFSDF-NTSMRTNEQEVSATLNANTENIKS----EIKKLEN----- 134
AG+ L K +EY G ++ M +E++V+ LN E + + +++ N
Sbjct: 522 AGDKLILKSQEYNGHVIEYIGYVMEIHEEDVTLKLNPGFEQMYNFEPMDVEFTYNRTTSR 581
Query: 135 -------QLIETTTRLLTSYQIFLNNARDSAN---NQITANKTESLEALNQAKTSANNEI 184
Q+I ++L +I L + + + N Q T N +S+ + + + ++
Sbjct: 582 RCHYALEQVIHLGVKVLFPEEIILQSPQVTGNWSLAQDTKNDGQSITNITRNDGQSMTKV 641
Query: 185 TANQTQALTNI--NEAKENAN---------NQITENKTQAITNINEAKNQSLSKH 228
T N +Q++TNI N+ + N ++T N +Q+ITNI Q ++K+
Sbjct: 642 TRNDSQSITNIIRNDGQSITNVTRNDGQPITKVTRNNSQSITNITRNDGQPITKN 696
>pir||B40892 apolipoprotein A-IV precursor - mouse (strain 129)
gb|AAA37214.1| (M64248) apolipoprotein A-IV [Mus musculus]
Length = 391
Score = 44.7 bits (104), Expect = 8e-04
Identities = 45/237 (18%), Positives = 89/237 (36%), Gaps = 17/237 (7%)
Query: 4 YPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLD 63
+ L N+A E EQ + ++T +L Q+ L S +++ V L V V LS
Sbjct: 35 FTQLSNNAKEAVEQFQKTDVTQQLSTLFQDKLGDASTYADGVHNKLVPFV----VQLSGH 90
Query: 64 FFKNANEIDSSLRNSIEWLNNA------------GESLKTKMKEYEGFFSDFNTSMRTNE 111
K + ++ +E L + GE+++ + + + D + T
Sbjct: 91 LAKETERVKEEIKKELEDLRDRMMPHANKVTQTFGENMQKLQEHLKPYAVDLQDQINTQT 150
Query: 112 QEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLE 171
QE+ L + +++ IK+ + L + L T+ + N + +T E
Sbjct: 151 QEMKLQLTPYIQRMQTTIKENVDNLHTSMMPLATNLKDKFNRNMEELKGHLTPRANELKA 210
Query: 172 ALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
++Q + +N E Q+ +N + T ++ AK L K+
Sbjct: 211 TIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVS-AKIDQLQKN 266
>pir||T18352 protein P120 - Mycoplasma hominis
gb|AAA67449.1| (U22019) P120 [Mycoplasma hominis]
Length = 1078
Score = 44.7 bits (104), Expect = 8e-04
Identities = 43/139 (30%), Positives = 62/139 (43%), Gaps = 8/139 (5%)
Query: 57 EVLLSLDFFKNANE-IDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVS 115
++L S FKN+ + I+S L+ S E NN ES KTK+ E D N ++ T E++ S
Sbjct: 140 KLLSSESKFKNSGKKIESYLKKSTEIENNIKES-KTKLVELRKALDDLNKNLETLEKQNS 198
Query: 116 ATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEA--- 172
N + K E K +N I+ Q L +D + NK LE
Sbjct: 199 DGTKNNEISSKKEEIKAKNLEIKQEEEKFEGLQTELKTQKDKIIEE--TNKKSKLEIEVA 256
Query: 173 -LNQAKTSANNEITANQTQ 190
L K + + EI ANQ +
Sbjct: 257 NLTTKKENISKEIEANQKE 275
Score = 44.3 bits (103), Expect = 0.001
Identities = 52/209 (24%), Positives = 88/209 (41%), Gaps = 29/209 (13%)
Query: 25 NELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSS------LRNS 78
N+L+KQLQ N NS E+ E +K + L + K E++++ +
Sbjct: 61 NDLMKQLQETKN-NSKTIEEKEKLVKKLQEDLNKIQQERTAKYQAELNAANKAIVEIPKK 119
Query: 79 IEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIE 138
E LN + LK ++ E + + + +++ + L +TE +EN + E
Sbjct: 120 YEELNEKNDDLKDQLSSLETKLLSSESKFKNSGKKIESYLKKSTE--------IENNIKE 171
Query: 139 TTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALT---NI 195
+ T+L + L A D N + E+LE N T NNEI++ + + I
Sbjct: 172 SKTKL-----VELRKALDDLNKNL-----ETLEKQNSDGTK-NNEISSKKEEIKAKNLEI 220
Query: 196 NEAKENANNQITENKTQAITNINEAKNQS 224
+ +E TE KTQ I E +S
Sbjct: 221 KQEEEKFEGLQTELKTQKDKIIEETNKKS 249
>ref|NP_562530.1| (NC_003366) probable cell wall-binding protein [Clostridium
perfringens]
dbj|BAB81320.1| (AP003191) probable cell wall-binding protein [Clostridium
perfringens]
Length = 441
Score = 44.3 bits (103), Expect = 0.001
Identities = 36/134 (26%), Positives = 65/134 (47%), Gaps = 10/134 (7%)
Query: 72 DSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKK 131
+S L++ E L++ L+ + KEY+ S + + + NE LN+ E ++EI
Sbjct: 191 ESQLKSQEEDLSSKKTKLENEKKEYDTLVSQYQSQL--NE------LNSLEEEKQAEINS 242
Query: 132 LENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQA 191
L + T + SY+ N +D NN I K+ + + N +K+S NN+ T + +
Sbjct: 243 LSEKE-RTVLDEINSYEEDNANLKDYINNLINEKKSVKVNSDNNSKSSTNNKSTEESSSS 301
Query: 192 LTNIN-EAKENANN 204
N E K N+++
Sbjct: 302 SNEGNSETKANSSS 315
>ref|NP_282643.1| (NC_002163) putative MCP-type signal transduction protein
[Campylobacter jejuni]
pir||F81297 probable MCP-type signal transduction protein Cj1506c [imported] -
Campylobacter jejuni (strain NCTC 11168)
emb|CAB73927.1| (AL139078) putative MCP-type signal transduction protein
[Campylobacter jejuni]
Length = 700
Score = 44.3 bits (103), Expect = 0.001
Identities = 53/241 (21%), Positives = 102/241 (41%), Gaps = 39/241 (16%)
Query: 9 NSALEITEQP------EVKEITNELLKQLQNALNSNSL-------------FSEQVELSL 49
N IT+ P E+K++ N +L LQ+ + SN FS +V +
Sbjct: 429 NLTARITKNPINPQLVELKDVLNRMLDVLQSKIGSNMNEINRVFDSYKALDFSTEV-FNA 487
Query: 50 KGIVRILE----------VLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGF 99
KG V I +L S +F K+ L+NS++ L + + + +++
Sbjct: 488 KGEVEITTNILGKEIKKMLLASSNFAKDLANQSEELKNSMQKLADGSNAQASSLEQSAAA 547
Query: 100 FSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSAN 159
+ N+SM+ N + + + ++IK+ + +++ +T L + + AR +
Sbjct: 548 VEEINSSMQ-NVSGKTVEVASQADDIKNIVNVIKDIAEQTN---LLALNAAIEAARAGEH 603
Query: 160 NQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINE 219
+ A + + L + + +EI AN + ++NE E+ Q T IT IN+
Sbjct: 604 GRGFAVVADEVRQLAERTGKSLSEIEANINILVQSVNEVAESVKEQ-----TAGITQIND 658
Query: 220 A 220
A
Sbjct: 659 A 659
>ref|NP_048227.1| (NC_001993) ORF MSV156 hypothetical protein [Melanoplus sanguinipes
entomopoxvirus]
pir||T28317 ORF MSV156 hypothetical protein - Melanoplus sanguinipes
entomopoxvirus
gb|AAC97677.1| (AF063866) ORF MSV156 hypothetical protein [Melanoplus sanguinipes
entomopoxvirus]
Length = 1127
Score = 44.3 bits (103), Expect = 0.001
Identities = 52/246 (21%), Positives = 96/246 (38%), Gaps = 45/246 (18%)
Query: 23 ITNELLKQLQNALN---SNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSI 79
I N+ + L + +N +N F E + + L + D F N+I +S+ N+I
Sbjct: 611 IENKFIGNLDSIINKIINNDQFKEYINSKIDSKSNELSTMFD-DIFNAKNQI-ASITNNI 668
Query: 80 EWLNN--------------AGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENI 125
E ++N + + L ++++Y+ F +M T + TL + ++I
Sbjct: 669 ENISNKIKDLNEFIISNEDSSKELLDEIRKYKQQFDKIKDAMNTEVKSFENTLQKDIDSI 728
Query: 126 KSEIKKLEN--QLIETTTRLL--------TSYQIFLNNARD--------------SANNQ 161
KS I +L N +I T L + ++ NNA D N
Sbjct: 729 KSNINELTNAYDIINTKANDLDDKLNNYGSEFKNLYNNASDLLDTIQKNNDEKVKQLNEY 788
Query: 162 ITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAK 221
+ NK +S+E + I N T+ ++NE N+ I + + +N+
Sbjct: 789 LEKNKNQSIEINDIVNNFIKELIKFNNTETNKSLNELL--TNDDINDKIFKLYKELNKIS 846
Query: 222 NQSLSK 227
+L K
Sbjct: 847 TNNLLK 852
>ref|NP_645581.1| (NC_003923) fibrinogen-binding protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB94629.1| (AP004824) fibrinogen-binding protein [Staphylococcus aureus subsp.
aureus MW2]
Length = 946
Score = 44.3 bits (103), Expect = 0.001
Identities = 47/172 (27%), Positives = 73/172 (42%), Gaps = 15/172 (8%)
Query: 58 VLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSAT 117
+L S + + N + S S E +N S+ K + SD TS TN E S
Sbjct: 31 LLSSKEADASENSVTQSDSASNESKSNDSSSVSAAPKTDDTNVSDTKTSSNTNNGETSVA 90
Query: 118 LN-ANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQA 176
N A E +S + + T T+ N A A Q ++ T + E +NQ
Sbjct: 91 QNPAQQETTQSALTNATTEETPVTGEATTA----TNQANTPATTQ--SSNTNAEELVNQT 144
Query: 177 KTSANNEITANQTQALTNINEAKE--NANNQIT--ENKTQAITNINEAKNQS 224
+NE T+N T ++++N + NA N T + T+A + NE+ QS
Sbjct: 145 ----SNETTSNDTNTVSSVNSPQNSTNAENVSTTQDTSTEATPSNNESAPQS 192
>ref|NP_646516.1| (NC_003923) ORFID:MW1699~hypothetical protein, similar to FmtB
protein [Staphylococcus aureus subsp. aureus MW2]
dbj|BAB95564.1| (AP004828) ORFID:MW1699~hypothetical protein, similar to FmtB protein
[Staphylococcus aureus subsp. aureus MW2]
Length = 2186
Score = 43.9 bits (102), Expect = 0.001
Identities = 46/229 (20%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 14 ITEQPEVKEITNELLKQLQNALNSNS-LFSEQVELSLKGIVRILEVLLSLDFFKNAN-EI 71
+T++ + N+L + +N N+ +E+ +++L + + L ++ + N E+
Sbjct: 1117 VTKKQTATGVLNDLATAKKQEINQNTNATTEEKQVALNQVDQELATAINNINQADTNAEV 1176
Query: 72 DSSLRNSIEWLNNAGESLKTKM-------KEYEGFFSDFNTSMRTNEQEVSATLNANTEN 124
D + + + +N ++ K + Y ++ N + E +A +N ++
Sbjct: 1177 DQAQQLGTKAINAIQPNIVKKPAALAQINQHYNAKLAEINATPDATNDEKNAAINTLNQD 1236
Query: 125 IKSEIKKLENQLIETTTRLLTSYQIFLNNA---------RDSANNQITANKTESLEALNQ 175
+ I+ ++ T + + + NN + +A ++ITA + +EA+ Q
Sbjct: 1237 RQQAIESIKQA--NTNAEVDQAATVAENNIDAVQVDVVKKQAARDKITAEVAKRIEAVKQ 1294
Query: 176 AKTSANNEITANQTQALTNINEAKENANNQITENKT--QAITNINEAKN 222
+ + E A A+ IN+ K+ A NQI +N+T Q T N+A N
Sbjct: 1295 TPNATDEEKQA----AVNQINQLKDQAFNQINQNQTNDQVDTTTNQALN 1339
>ref|NP_282010.1| (NC_002163) hypothetical protein Cj0849c [Campylobacter jejuni]
pir||A81358 hypothetical protein Cj0849c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73114.1| (AL139076) hypothetical protein Cj0849c [Campylobacter jejuni]
Length = 719
Score = 43.9 bits (102), Expect = 0.001
Identities = 49/224 (21%), Positives = 86/224 (37%), Gaps = 20/224 (8%)
Query: 17 QPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLR 76
Q ++ I N++LK+L + N + E + IL+ + F K N + + L
Sbjct: 253 QEKITPIANKILKELNSIKNDFFKALNKPENLMIKDPNILKQTATA-FEKLENTLKNILG 311
Query: 77 NSIEWLNNAGESLKTKMKEYEGFFSD-FNTSMRTNEQEVSATLNANTENIKSEIKKLENQ 135
N + + L+ + E + N + + ++E + EN+ S IK E
Sbjct: 312 NQASKIQDKENILENLLSNKENMKEEKLNHNTKNQDEEKHIKASKEDENLDSGIKTHEED 371
Query: 136 LIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEI----------- 184
+T + NN ++ + N T + E + K + E
Sbjct: 372 TQDTKNDIQ-------NNETENKPDNDIKNSTPNQEKIKDEKQEKSKENIKENPKFYETK 424
Query: 185 TANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
T N+T TN N + N NN N TQ I + N Q++ K+
Sbjct: 425 TENKTSINTNTNTSNPNTNNTQNLNNTQNIQSNNNQTMQNIFKN 468
>ref|NP_372282.1| (NC_002758) Mrp protein [Staphylococcus aureus subsp. aureus Mu50]
dbj|BAB57920.1| (AP003363) Mrp protein [Staphylococcus aureus subsp. aureus Mu50]
Length = 1983
Score = 43.9 bits (102), Expect = 0.001
Identities = 46/229 (20%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 14 ITEQPEVKEITNELLKQLQNALNSNS-LFSEQVELSLKGIVRILEVLLSLDFFKNAN-EI 71
+T++ + N+L + +N N+ +E+ +++L + + L ++ + N E+
Sbjct: 1117 VTKKQTATGVLNDLATAKKQEINQNTNATTEEKQVALNQVDQELATAINNINQADTNAEV 1176
Query: 72 DSSLRNSIEWLNNAGESLKTKM-------KEYEGFFSDFNTSMRTNEQEVSATLNANTEN 124
D + + + +N ++ K + Y ++ N + E +A +N ++
Sbjct: 1177 DQAQQLGTKAINAIQPNIVKKPAALAQINQHYNAKLAEINATPDATNDEKNAAINTLNQD 1236
Query: 125 IKSEIKKLENQLIETTTRLLTSYQIFLNNA---------RDSANNQITANKTESLEALNQ 175
+ I+ ++ T + + + NN + +A ++ITA + +EA+ Q
Sbjct: 1237 RQQAIESIKQA--NTNAEVDQAATVAENNIDAVQVDVVKKQAARDKITAEVAKRIEAVKQ 1294
Query: 176 AKTSANNEITANQTQALTNINEAKENANNQITENKT--QAITNINEAKN 222
+ + E A A+ IN+ K+ A NQI +N+T Q T N+A N
Sbjct: 1295 TPNATDEEKQA----AVNQINQLKDQAINQINQNQTNDQVDTTTNQAVN 1339
>ref|NP_374866.1| (NC_002745) hypothetical protein, simialr to FmtB protein
[Staphylococcus aureus subsp. aureus N315]
dbj|BAB42845.1| (AP003135) ORFID:SA1577~hypothetical protein, similar to FmtB protein
[Staphylococcus aureus subsp. aureus N315]
Length = 2186
Score = 43.9 bits (102), Expect = 0.001
Identities = 46/229 (20%), Positives = 101/229 (44%), Gaps = 26/229 (11%)
Query: 14 ITEQPEVKEITNELLKQLQNALNSNS-LFSEQVELSLKGIVRILEVLLSLDFFKNAN-EI 71
+T++ + N+L + +N N+ +E+ +++L + + L ++ + N E+
Sbjct: 1117 VTKKQTATGVLNDLATAKKQEINQNTNATTEEKQVALNQVDQELATAINNINQADTNAEV 1176
Query: 72 DSSLRNSIEWLNNAGESLKTKM-------KEYEGFFSDFNTSMRTNEQEVSATLNANTEN 124
D + + + +N ++ K + Y ++ N + E +A +N ++
Sbjct: 1177 DQAQQLGTKAINAIQPNIVKKPAALAQINQHYNAKLAEINATPDATNDEKNAAINTLNQD 1236
Query: 125 IKSEIKKLENQLIETTTRLLTSYQIFLNNA---------RDSANNQITANKTESLEALNQ 175
+ I+ ++ T + + + NN + +A ++ITA + +EA+ Q
Sbjct: 1237 RQQAIESIKQA--NTNAEVDQAATVAENNIDAVQVDVVKKQAARDKITAEVAKRIEAVKQ 1294
Query: 176 AKTSANNEITANQTQALTNINEAKENANNQITENKT--QAITNINEAKN 222
+ + E A A+ IN+ K+ A NQI +N+T Q T N+A N
Sbjct: 1295 TPNATDEEKQA----AVNQINQLKDQAINQINQNQTNDQVDTTTNQAVN 1339
>emb|CAA66612.1| (X97969) Sb component [Clostridium spiroforme]
Length = 879
Score = 43.5 bits (101), Expect = 0.002
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 5/162 (3%)
Query: 24 TNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSL-RNSIEWL 82
T L+K+ NALN +++ Q+E +K +++ + D + N S++ N+ + L
Sbjct: 587 TANLIKERLNALNDKKIYNVQLERGMKILIKTSTYFNNFDGYNNFPSSWSNVDSNNQDGL 646
Query: 83 NNAGESL--KTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETT 140
NA L +TK+ + + + + + S+T N T NIK++ +K N + E
Sbjct: 647 QNAANKLSGETKIVIPMSKLNPYKRYVFSGYLKNSSTSNPITVNIKAKEQKTYNLVSEND 706
Query: 141 TRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANN 182
+ SY+ F RD++N +IT + ++ N + T N+
Sbjct: 707 YKKF-SYE-FETIGRDASNIEITLTSSGTIFLDNLSITELNS 746
>dbj|BAB23620.1| (AK004856) apolipoprotein A-IV~data source:MGD, source
key:MGI:88051, evidence:ISS~putative [Mus musculus]
Length = 395
Score = 43.5 bits (101), Expect = 0.002
Identities = 44/233 (18%), Positives = 89/233 (37%), Gaps = 9/233 (3%)
Query: 4 YPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLD 63
+ L N+A E EQ + ++T +L Q+ L S +++ V L V L L+ +
Sbjct: 35 FTQLSNNAKEAVEQFQKTDVTQQLSTLFQDKLGDASTYADGVHNKLVPFVVQLSGHLAQE 94
Query: 64 FFKNANEIDSSLRNSIEWL--------NNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVS 115
+ EI L + + + GE+++ + + + D + T QE+
Sbjct: 95 TERVKEEIKKELEDQRDRMMPHANKVTQTFGENMQKLQEHLKPYAVDLQDQINTQTQEMK 154
Query: 116 ATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQ 175
L + +++ IK+ + L + L T+ + N + +T E ++Q
Sbjct: 155 LQLTPYIQRMQTTIKENVDNLHTSMMPLATNLKDKFNRNMEELKGHLTPRANELKATIDQ 214
Query: 176 AKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
+ +N E Q+ +N + T ++ AK L K+
Sbjct: 215 NLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVS-AKIDQLQKN 266
>gb|AAB96359.2| (U57551) high molecular weight outer membrane protein [Moraxella
catarrhalis]
Length = 832
Score = 43.5 bits (101), Expect = 0.002
Identities = 43/184 (23%), Positives = 78/184 (42%), Gaps = 28/184 (15%)
Query: 63 DFFKNANEIDSSLRNSIE--WLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA 120
D KN +I +L N++E LN +G L K +D + ++ N E++ +
Sbjct: 446 DIAKNQADI-KTLENNVEEELLNLSGRLLDQK--------ADIDNNIN-NIYELAQQQDQ 495
Query: 121 NTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQI---------------TAN 165
++ +IK+ +E L++ + RL+ N D A NQ
Sbjct: 496 HSSDIKTLKNNVEEGLLDLSGRLIDQKADIAKNQADIAQNQTDIQDLAAYNELQDQYAQK 555
Query: 166 KTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITENK-TQAITNINEAKNQS 224
+TE+++ALN+A + I NQ NIN E A Q + + + ++ A
Sbjct: 556 QTEAIDALNKASSENTQNIAKNQADIANNINNIYELAQQQDQHSSDIKTLAKVSAANTDR 615
Query: 225 LSKH 228
++K+
Sbjct: 616 IAKN 619
>ref|NP_232619.1| (NC_002506) hemolysin secretion protein HylB [Vibrio cholerae]
sp|P15492|HLYB_VIBCH Hemolysin secretion protein precursor
pir||B82486 hemolysin secretion protein HylB VCA0220 [imported] - Vibrio
cholerae (group O1 strain N16961)
gb|AAF96132.1| (AE004362) hemolysin secretion protein HylB [Vibrio cholerae]
Length = 548
Score = 43.5 bits (101), Expect = 0.002
Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Query: 66 KNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENI 125
K E+ + ++ + L+NA + + + + G S +T +EQ LNA E
Sbjct: 345 KVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAA 404
Query: 126 KSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSAN--NE 183
++ + ++ R L S N++ T ++EA+ + ++ ++ E
Sbjct: 405 RAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVE 464
Query: 184 ITANQTQALTNINEAKENANNQ------ITENKTQAITNIN 218
+A Q+LT IN + N+Q TE ++ + +IN
Sbjct: 465 FSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDIN 505
>pir||S15910 hemolysin-releasing protein - Vibrio cholerae
emb|CAA68638.1| (Y00557) methyl accepting chemotaxis protein [Vibrio cholerae]
Length = 548
Score = 43.5 bits (101), Expect = 0.002
Identities = 34/161 (21%), Positives = 69/161 (42%), Gaps = 8/161 (4%)
Query: 66 KNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENI 125
K E+ + ++ + L+NA + + + + G S +T +EQ LNA E
Sbjct: 345 KVVGEVQNRIQTLVNELDNATQVVSSLATQINGISSTLDTIRSISEQTNLLALNAAIEAA 404
Query: 126 KSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSAN--NE 183
++ + ++ R L S N++ T ++EA+ + ++ ++ E
Sbjct: 405 RAGEQGRGFAVVADEVRTLASRSAASTEEIQQVINRLQTESTRAVEAMEKGRSQSDVVVE 464
Query: 184 ITANQTQALTNINEAKENANNQ------ITENKTQAITNIN 218
+A Q+LT IN + N+Q TE ++ + +IN
Sbjct: 465 FSAKANQSLTEINSQIDQINDQNIQVATATEEQSTVVEDIN 505
>gb|AAF19116.1|AF143461_1 (AF143461) BdrC3 [Borrelia hermsii]
Length = 332
Score = 43.5 bits (101), Expect = 0.002
Identities = 40/209 (19%), Positives = 91/209 (43%), Gaps = 15/209 (7%)
Query: 22 EITNELLKQLQNALNSNSLFSEQVELSLKGIVRIL-------EVLLSLDFFKNANEIDSS 74
E+T + ++ L+ N L E+V SLK ++ L E L++ NE+ S
Sbjct: 38 ELTYKDIEYLETTFN---LKLEKVGASLKSDIKDLDNKIDTVENNLNIKIDNVRNELKSD 94
Query: 75 LRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLEN 134
+++ ++N LK+ +K+ + + ++++ +++ ++ +KS+IK L+N
Sbjct: 95 IKDLDNKIDNVRNELKSDIKDLDNKIDNVRNELKSDIKDLDNKIDNVRNELKSDIKDLDN 154
Query: 135 QLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTN 194
++ L + + L+N D+ N + L +N+I + N
Sbjct: 155 KIDNVRNELKSDIK-DLDNKIDTVENNLNIKIDNVRNELKSDIKDLDNKIDTVE----NN 209
Query: 195 INEAKENANNQITENKTQAITNINEAKNQ 223
+N +N N++ + I+ +N+
Sbjct: 210 LNIKIDNVRNELKSDIKDLDNKIDNVRNE 238
>gb|AAF19774.1|AF128451_1 (AF128451) repeat motif protein bdrA8 [Borrelia turicatae]
Length = 251
Score = 43.5 bits (101), Expect = 0.002
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 17/179 (9%)
Query: 46 ELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFS---- 101
EL+ GI R + + LS ++KN IE+L + K+++ E
Sbjct: 16 ELTKAGIKRDIAIDLSYRYYKN-----ELTHKDIEYLET---TFNLKLEKVEALLQAEIK 67
Query: 102 DFNTSMRTNEQEVSATLNANTEN----IKSEIKKLENQLIETTTRLLTSYQIFLNNARDS 157
T + T + V LN +N + ++I +EN L ++N ++
Sbjct: 68 SLKTELDTKIENVRVELNNKIDNKFNELDNKIDNVENNLNNKIDNKFNELDNKIDNVENN 127
Query: 158 ANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITN 216
NN+I E ++ + + NN+I + I+ + N NN+I +NK + N
Sbjct: 128 LNNKIDNKFNELDNKIDNVENNLNNKIDNKFNELDNKIDNVENNLNNKI-DNKFNELDN 185
>ref|NP_248322.1| (NC_000909) purine NTPase [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
sp|Q58718|RA50_METJA DNA double-strand break repair rad50 ATPase
pir||A64465 hypothetical protein MJ1322 - Methanococcus jannaschii
gb|AAB99331.1| (U67572) purine NTPase [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 1005
Score = 43.1 bits (100), Expect = 0.002
Identities = 59/257 (22%), Positives = 105/257 (39%), Gaps = 54/257 (21%)
Query: 12 LEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLS-LDFFKNANE 70
L + +Q +++E+ +L + N S V ++ K + ILE + S L+ FKN
Sbjct: 565 LYLEKQSQIEELELKLKNYKEQLDEINKKISNYV-INGKPVDEILEDIKSQLNKFKN--- 620
Query: 71 IDSSLRNSIEWLNNAGES-LKTKMKEYEGFFSDFN--------TSMRTNEQEVSATLNAN 121
+ +++ +LN+ E ++ ++KE E S +N +R +E+E++
Sbjct: 621 FYNQYLSAVSYLNSVDEEGIRNRIKEIENIVSGWNKEKCREELNKLREDEREIN-----R 675
Query: 122 TENIKSEIKKLENQLIETTTRLLTSYQIF------------LNNARDS-------ANNQI 162
++ +E+K E +LIE R + + L N +D N++I
Sbjct: 676 LKDKLNELKNKEKELIEIENRRSLKFDKYKEYLGLTEKLEELKNIKDGLEEIYNICNSKI 735
Query: 163 TA--------NKTESLEALNQAKTSANNEIT--------ANQTQALTNINEAKENANNQI 206
A NK + LN N EI NQ N NE + ++
Sbjct: 736 LAIDNIKRKYNKEDIEIYLNNKILEVNKEINDIEERISYINQKLDEINYNEEEHKKIKEL 795
Query: 207 TENKTQAITNINEAKNQ 223
ENK Q + N+ E K +
Sbjct: 796 YENKRQELDNVREQKTE 812
>ref|NP_603419.1| (NC_003454) Exonuclease SBCC [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gb|AAL94718.1| (AE010564) Exonuclease SBCC [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 921
Score = 43.1 bits (100), Expect = 0.002
Identities = 51/195 (26%), Positives = 92/195 (47%), Gaps = 32/195 (16%)
Query: 28 LKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNAN-------EIDSSLRNSIE 80
+K L+ +L + + +++EL +K + ++ L+ F+N+ E++ LRN
Sbjct: 534 IKDLEISLKNEEINLKEIELDIKNLDIDIQKLIENQEFQNSQMLREKKTELEVELRNLN- 592
Query: 81 WLNNAGESLKTKMK----EYEGFFSDFNTSMRTNEQEVSA-------TLNANTENIKSEI 129
L+ E+LK ++ E E + N S+++N +E+ +N N E+IKSEI
Sbjct: 593 -LDEKRENLKNILENLEIEKEKILKNQN-SIKSNLEEIDVFSKKIKEDINKNIESIKSEI 650
Query: 130 KKLENQLIETTTRLLTSYQIFLNN---ARDSANNQITANKTESLEALNQAKTSAN--NEI 184
K EN+L + L Y +L N A D N I +K +++ L ++ N E
Sbjct: 651 KTFENKLDD----LKNPYNEYLKNNVLAEDLENLLIKVDK--NIKELYSLRSDKNLLKEK 704
Query: 185 TANQTQALTNINEAK 199
N + + NI A+
Sbjct: 705 VFNLEEKIKNIKIAE 719
Score = 43.1 bits (100), Expect = 0.002
Identities = 33/160 (20%), Positives = 75/160 (46%), Gaps = 13/160 (8%)
Query: 63 DFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNT---SMRTNEQEVSATLN 119
+F K E++ +L++ + +N ++L+ ++K+YE + N +++ E ++ LN
Sbjct: 206 NFLKEEKELEKNLQDRFKNINVVSKNLENEIKDYETTEIELNNLVKNIKDEENKIKKYLN 265
Query: 120 ANTEN-IKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANN--------QITANKTESL 170
EN I+++ K +++ T + Y N +D N ++ ++
Sbjct: 266 ILKENIIEAKQAKKSKIIVKETEKSYLEYLEIENRLKDLRENLDNLLEEQKLNIQYQNNI 325
Query: 171 EALNQAKTSANNEITANQTQALTNINEAKENANNQITENK 210
E L + + N+I N + ++ +E KEN ++I+ K
Sbjct: 326 EKLELSNKNLKNDI-INLEENISKNSEKKENLESEISNLK 364
>pir||S14548 asparagine-rich protein (clone 37C3) - malaria parasite
(Plasmodium falciparum)
emb|CAA35524.1| (X17488) unnamed protein product [Plasmodium falciparum]
Length = 1064
Score = 43.1 bits (100), Expect = 0.002
Identities = 28/97 (28%), Positives = 44/97 (44%), Gaps = 12/97 (12%)
Query: 139 TTTRLLTSYQIFLNNARDSANNQIT--------ANKTESLEALNQAKTSANNEITANQTQ 190
T L+ + + +NN ++ NN I N + + +NQ KT NN++T T
Sbjct: 505 TDEELVNIFNVDVNNLINNQNNMINLGFHDGFGTNGLMNNQMINQMKTQLNNQMTNQMTN 564
Query: 191 ALTN--INEAKENANNQITENKTQAITN--INEAKNQ 223
+TN N+ NQ+T T +TN N+ NQ
Sbjct: 565 QMTNQMTNQMTNQMTNQMTNQMTNQMTNQMTNQVNNQ 601
>pir||S14556 asparagine-rich protein (clone 18C1) - malaria parasite
(Plasmodium falciparum)
emb|CAA35521.1| (X17485) unnamed protein product [Plasmodium falciparum]
Length = 1256
Score = 43.1 bits (100), Expect = 0.002
Identities = 28/97 (28%), Positives = 44/97 (44%), Gaps = 12/97 (12%)
Query: 139 TTTRLLTSYQIFLNNARDSANNQIT--------ANKTESLEALNQAKTSANNEITANQTQ 190
T L+ + + +NN ++ NN I N + + +NQ KT NN++T T
Sbjct: 713 TDEELVNIFNVDVNNLINNQNNMINLGFHDGFGTNGLMNNQMINQMKTQLNNQMTNQMTN 772
Query: 191 ALTN--INEAKENANNQITENKTQAITN--INEAKNQ 223
+TN N+ NQ+T T +TN N+ NQ
Sbjct: 773 QMTNQMTNQMTNQMTNQMTNQMTNQMTNQMTNQVNNQ 809
>ref|XP_134754.1| (XM_134754) apolipoprotein A-IV [Mus musculus]
gb|AAH10769.1|AAH10769 (BC010769) Unknown (protein for MGC:18592) [Mus musculus]
Length = 395
Score = 43.1 bits (100), Expect = 0.002
Identities = 44/237 (18%), Positives = 89/237 (36%), Gaps = 17/237 (7%)
Query: 4 YPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLD 63
+ L N+A E EQ + ++T +L Q+ L S +++ V L V V LS
Sbjct: 35 FTQLSNNAKEAVEQFQKTDVTQQLSTLFQDKLGDASTYADGVHNKLVPFV----VQLSGH 90
Query: 64 FFKNANEIDSSLRNSIEWLNNA------------GESLKTKMKEYEGFFSDFNTSMRTNE 111
+ + ++ +E L + GE+++ + + + D + T
Sbjct: 91 LAQETERVKEEIKKELEDLRDRMMPHANKVTQTFGENMQKLQEHLKPYAVDLQDQINTQT 150
Query: 112 QEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLE 171
QE+ L + +++ IK+ + L + L T+ + N + +T E
Sbjct: 151 QEMKLQLTPYIQRMQTTIKENVDNLHTSMMPLATNLKDKFNRNMEELKGHLTPRANELKA 210
Query: 172 ALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
++Q + +N E Q+ +N + T ++ AK L K+
Sbjct: 211 TIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVS-AKIDQLQKN 266
>ref|NP_375094.1| (NC_002745) hypothetical protein [Bacteriophage phiN315]
[Staphylococcus aureus subsp. aureus N315]
dbj|BAB43073.1| (AP003135) hypothetical protein [Staphylococcus aureus subsp.
aureus N315]
Length = 647
Score = 42.7 bits (99), Expect = 0.003
Identities = 55/228 (24%), Positives = 105/228 (45%), Gaps = 38/228 (16%)
Query: 5 PNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDF 64
P N I +Q E++++ NE + +QN +L ++ + + L+ + + +
Sbjct: 231 PEFDNDRHTIIKQ-EIEQLENERI-DIQNGAEEINLRNQLADKQSE-----LKRIEANNS 283
Query: 65 FKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTEN 124
N N+I + L N + N +LKT++K+ N T+E+ L N +
Sbjct: 284 ASNENKIHA-LTNELHVENGTVANLKTRLKQ--------NKQQITHEENRRNQLLENHKG 334
Query: 125 IKSEIKKLENQLIE--------TTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQA 176
+KS+++K +NQ E + L + Q+ + R+ A + ANK++ LE +
Sbjct: 335 LKSDLEKAKNQKFEYLDDNVCSCCGQQLPAEQV--SEVREKALQKFNANKSKELETI--- 389
Query: 177 KTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQS 224
+TS N+ I ++ + + I E E+ NN + INEA+ +S
Sbjct: 390 QTSINHII--SEGKKIKPIIEKLEDDNNNLQ-------IKINEAEERS 428
>ref|NP_192428.1| (NM_116758) kinesin - like protein [Arabidopsis thaliana]
emb|CAB81061.1| (AL161503) kinesin-like protein [Arabidopsis thaliana]
Length = 777
Score = 42.7 bits (99), Expect = 0.003
Identities = 38/154 (24%), Positives = 67/154 (42%), Gaps = 15/154 (9%)
Query: 87 ESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKL-----------ENQ 135
E+L + ++ E +SD +T E+E+ AT+ ENI+S +KL EN
Sbjct: 105 ENLSSSLQSAEKRYSDKELDAKTKEEELRATITEMKENIESLQEKLSKEKLSKLDAIENH 164
Query: 136 LIETTTRLLT-SYQIFLNNARDSANNQITA--NKTESLEALNQAKTSANNEITANQTQAL 192
E R++ Q+ L D + A K SLE + + N + T+
Sbjct: 165 RREKDCRVVAEKLQVSLREELDKVKEEKMAAKQKVTSLEDMYKRLQEYNTSLQQYNTKLQ 224
Query: 193 TNINEAKENANNQITENKTQAITNINEAKNQSLS 226
T++ A+E A+ + + K+ + N+ + S S
Sbjct: 225 TDLEVARE-AHTRAEKEKSSILENLTTLRGHSKS 257
>ref|NP_038334.1| (NC_002185) ORF33 [Streptococcus thermophilus bacteriophage 7201]
gb|AAF43525.1|AF145054_34 (AF145054) ORF33 [Streptococcus thermophilus bacteriophage 7201]
Length = 1554
Score = 42.4 bits (98), Expect = 0.004
Identities = 58/243 (23%), Positives = 96/243 (38%), Gaps = 43/243 (17%)
Query: 9 NSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNA 68
NS +++Q E ++ + L+ S SE+ + K R+ E +S+ KNA
Sbjct: 168 NSIANLSKQYEKQK------EMLERVAKQTSKTSEEYLIQKK---RLDETAISMAHAKNA 218
Query: 69 -----NEIDSS---------LRNSIEWLNNAGESLKTKMKEYEGFF-SDFNTSMRTNEQE 113
NEI S L+NS L N + + K +G F + F ++
Sbjct: 219 ADKLNNEIKQSQQSSTLIGRLKNSFHRLGNEVDETEKKTSRLKGVFGATFAANL------ 272
Query: 114 VSATLNANTENIKS---EIKKLENQLIETTTRLLTSYQIFLNNARDSANN--------QI 162
+SA +IKS EI + ++ + ++ NA D Q
Sbjct: 273 ISAGFQNALGSIKSKFDEIAQSSADYVKYQQTMNATWLTLTGNAEDGKKMVDMTNQMAQA 332
Query: 163 TANKTESLEALNQA--KTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEA 220
AN TE ++ +NQ + N E+T QTQA+ + +A ++ + TQ I
Sbjct: 333 AANSTEMVDGMNQKFYAVTHNTELTKQQTQAILTLQDAFGQTDDAVKNFSTQWAQMIANG 392
Query: 221 KNQ 223
K Q
Sbjct: 393 KVQ 395
>gb|AAF19775.1|AF128452_1 (AF128452) repeat motif protein bdrA9 [Borrelia turicatae]
Length = 229
Score = 42.4 bits (98), Expect = 0.004
Identities = 39/175 (22%), Positives = 76/175 (43%), Gaps = 31/175 (17%)
Query: 46 ELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNT 105
EL+ GI R + + LS ++KN + K+ E + FN
Sbjct: 16 ELTKAGIKRDIAIDLSYRYYKN----------------------ELTHKDIEYLETTFNL 53
Query: 106 SMRTNEQEVSATLNANTENIKSEIK-KLENQLIETTTRLLTSYQIF---LNNARDSANNQ 161
+ ++V A L A +++K+E+ K+EN +E ++ + ++N ++ NN+
Sbjct: 54 KL----EKVEALLQAEIKSLKTELDTKIENVRVELNNKIDNKFNELDNKIDNVENNLNNK 109
Query: 162 ITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITN 216
I E ++ + + NN+I + I+ + N NN+I +NK + N
Sbjct: 110 IDNKFNELDNKIDNVENNLNNKIDNKFNELDNKIDNVENNLNNKI-DNKFNELDN 163
>ref|NP_473180.1| (NC_000521) predicted using hexExon; MAL3P2.16 (PF0235w),
Hypothetical protein, len: 1214 aa [Plasmodium
falciparum]
Length = 1213
Score = 42.4 bits (98), Expect = 0.004
Identities = 36/171 (21%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 67 NANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIK 126
+ N+ + L + I L N E++K KE S F N++E+ L +N +
Sbjct: 541 HTNDDVTKLLDEINDLKNTIENMK---KEKINLLSKFKAYTLNNKKELEE-LKIKCKNKE 596
Query: 127 SEIKKLENQL-------------IETTTRLLTSYQIFLNNARDSANNQITANKTESLEAL 173
+IK EN+L I+ + + SY I L+N + N + + + E +
Sbjct: 597 EQIKMYENKLQNKEDEIMNYVNEIQNKDKKIESYHIKLHNKEEEIMNYVNEIQNKEEEII 656
Query: 174 NQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQS 224
N+++ + + L INE +N N ++ + T + + + + ++
Sbjct: 657 KYVNELQNSDV-QKEKKELKTINEVLKNTNEKLEKEITSLLGEMKKIEEEN 706
>emb|CAB39019.2| (AL034558) hypothetical protein, PFC0315c [Plasmodium falciparum
3D7]
Length = 389
Score = 42.4 bits (98), Expect = 0.004
Identities = 48/201 (23%), Positives = 74/201 (35%), Gaps = 13/201 (6%)
Query: 28 LKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNAGE 87
L L+N LN S + S E+LL F++N + L + +NN
Sbjct: 85 LLNLENNLNCPSRYFHNYHSS--------EILLKNYFYENIKKF--LLNINYNEINNIIF 134
Query: 88 SLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSY 147
+ Y N + NE S N N+ +E ++E Q + T +
Sbjct: 135 LEYQRKYMYRQTPVQSNINKMYNEHMNSKNFNLNSSTGTNEYHEMEKQDLYTNGMSNKNN 194
Query: 148 QIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQIT 207
+NN ++ NN N T ++ N + NN N T N N N NN
Sbjct: 195 MNNMNNMNNT-NNMNNTNNTNNINNTNNINNT-NNMNNTNNTNNTNNTNNMN-NMNNTNN 251
Query: 208 ENKTQAITNINEAKNQSLSKH 228
N T + N N N + ++H
Sbjct: 252 MNNTNNMNNTNNMNNMNNNEH 272
>pir||T14867 interaptin - slime mold (Dictyostelium discoideum)
gb|AAC34582.1| (AF057019) interaptin [Dictyostelium discoideum]
Length = 1738
Score = 42.4 bits (98), Expect = 0.004
Identities = 50/231 (21%), Positives = 108/231 (46%), Gaps = 13/231 (5%)
Query: 2 INYPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLS 61
+N NL N ++ E+ ++ N+L +Q++ FS+Q ++++ + E L+
Sbjct: 883 LNQQNLINKENLNEKEQELLKLQNQLNQQIEKIQFDQQEFSKQNSINIELVNEKNEKLIQ 942
Query: 62 LDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNAN 121
L ++ +++ R++ E N L K + + ++ N + NE +
Sbjct: 943 LQ--QDYDQLKQQNRSNDEKDEN---DLIEKENQLKSIQNELNQLIEKNESD-HKEQQLK 996
Query: 122 TENIKSEIKKLENQLIETTTRLLTSYQIFLN--NARDSANNQITANKTESLEALNQAKTS 179
++I++++ + ENQ+ + ++L Q N + +D NQ+ + + S
Sbjct: 997 QQSIENDLIEKENQIQQLQSQLNEQRQQQSNQLSEKDQQLNQLIEKNQFDQKEQQLKQQS 1056
Query: 180 ANNEI--TANQTQAL-TNINEAKENANNQITENKTQAITNINEAKNQSLSK 227
N++ NQ Q L + +NE ++ +NQ++E K Q + + E KN+S K
Sbjct: 1057 IENDLFEKENQIQQLQSQLNEQRQQQSNQLSE-KDQQLNQLIE-KNESDQK 1105
>ref|NP_115323.1| (NC_002774) replication-associated protein [Staphylococcus aureus
subsp. aureus Mu50]
dbj|BAB47542.1| (AP003367) replication-associated protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 253
Score = 42.4 bits (98), Expect = 0.004
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 29/170 (17%)
Query: 64 FFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTE 123
F +N +++ + N+ +N+ E+LKTK+ E E F T + +E+ + E
Sbjct: 68 FNENTAKVEKYIHNN----SNSSETLKTKVNELEKQIEIFETRAKNDEKYI--------E 115
Query: 124 NIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTES-LEALNQAK----T 178
N+ ++ + +N + T +LL + QI S N K ES LE Q K T
Sbjct: 116 NLTKQLDQ-QNSNVNTLNKLLENQQIL------SLENNKKIQKLESQLEEERQLKYSFDT 168
Query: 179 SANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
+ NN N +A E +N N Q E + T +N +KH
Sbjct: 169 TMNNRQNINPQEA--TFTEESQNINQQQKECQP---TEVNHKNITEENKH 213
>ref|NP_473196.1| (NC_000521) predicted using hexExon; MAL3P2.32 (PFC0315c),
Hypothetical protein, len: 326 aa [Plasmodium
falciparum]
Length = 325
Score = 42.4 bits (98), Expect = 0.004
Identities = 48/201 (23%), Positives = 74/201 (35%), Gaps = 13/201 (6%)
Query: 28 LKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNAGE 87
L L+N LN S + S E+LL F++N + L + +NN
Sbjct: 85 LLNLENNLNCPSRYFHNYHSS--------EILLKNYFYENIKKF--LLNINYNEINNIIF 134
Query: 88 SLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSY 147
+ Y N + NE S N N+ +E ++E Q + T +
Sbjct: 135 LEYQRKYMYRQTPVQSNINKMYNEHMNSKNFNLNSSTGTNEYHEMEKQDLYTNGMSNKNN 194
Query: 148 QIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANNQIT 207
+NN ++ NN N T ++ N + NN N T N N N NN
Sbjct: 195 MNNMNNMNNT-NNMNNTNNTNNINNTNNINNT-NNMNNTNNTNNTNNTNNMN-NMNNTNN 251
Query: 208 ENKTQAITNINEAKNQSLSKH 228
N T + N N N + ++H
Sbjct: 252 MNNTNNMNNTNNMNNMNNNEH 272
>pir||S33441 EF protein - Streptococcus suis
emb|CAA50714.1| (X71880) EF [Streptococcus suis]
Length = 1822
Score = 42.4 bits (98), Expect = 0.004
Identities = 56/236 (23%), Positives = 97/236 (40%), Gaps = 33/236 (13%)
Query: 8 PNSALEITEQPEVKEITNELLKQL-QNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFK 66
P + Q + NE LK L +A NS + V+ S G+ V + D K
Sbjct: 666 PEEKAAVIAQIKKDNADNERLKGLPDSAFTVNSDGTVSVDYSAGGV----NVDGATDIIK 721
Query: 67 NANEIDSSLRNSIEWLNNAGESLKTKMKEY--------EGFFSDFNTSMRTNEQEVSATL 118
NA N + N A + TK+ E+ + FS + + ++ A
Sbjct: 722 NA------ATNLADTRNQAKAEIDTKLAEHKKAIEAKRDEAFSKIDDDISLRAEQRQAAK 775
Query: 119 NANTENIKSEIKKLENQLIETTTRL---LTSYQIFLNNARDSANNQITANKTESLEALNQ 175
+A +K+L+N+ E ++ T+ +I N+A+ + + + + +A+NQ
Sbjct: 776 DAVAAAAGDALKELDNKATEAKEKIDKATTASEI--NDAKTNGEINLDSAEAVGEKAINQ 833
Query: 176 AKTS--ANNEITANQTQALTNIN-------EAKENANNQITENKTQAITNINEAKN 222
AK A E+ +AL +N E K+ + I E+K A+ IN A+N
Sbjct: 834 AKEKELAKAEVENKAFEALEKVNNNPNLLEEEKKAYFDDIKESKEVAVEKINNAEN 889
>emb|CAB39003.2| (AL034558) Hypothetical protein, PFC0235w [Plasmodium falciparum
3D7]
Length = 1139
Score = 42.4 bits (98), Expect = 0.004
Identities = 36/171 (21%), Positives = 73/171 (42%), Gaps = 18/171 (10%)
Query: 67 NANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIK 126
+ N+ + L + I L N E++K KE S F N++E+ L +N +
Sbjct: 467 HTNDDVTKLLDEINDLKNTIENMK---KEKINLLSKFKAYTLNNKKELEE-LKIKCKNKE 522
Query: 127 SEIKKLENQL-------------IETTTRLLTSYQIFLNNARDSANNQITANKTESLEAL 173
+IK EN+L I+ + + SY I L+N + N + + + E +
Sbjct: 523 EQIKMYENKLQNKEDEIMNYVNEIQNKDKKIESYHIKLHNKEEEIMNYVNEIQNKEEEII 582
Query: 174 NQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQS 224
N+++ + + L INE +N N ++ + T + + + + ++
Sbjct: 583 KYVNELQNSDV-QKEKKELKTINEVLKNTNEKLEKEITSLLGEMKKIEEEN 632
>emb|CAB62884.1| (AL035475) hypothetical protein, MAL4P2.43 [Plasmodium falciparum
3D7]
Length = 977
Score = 42.0 bits (97), Expect = 0.005
Identities = 30/134 (22%), Positives = 60/134 (44%), Gaps = 7/134 (5%)
Query: 87 ESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTE--NIKSEIKKLENQLIETTTRLL 144
E LK K+++Y+ + F + E L E +K EI+ +N+++ +L
Sbjct: 499 EELKEKLEKYKNEYDQFILKQKNVEICSQELLLYEKEITYLKEEIENYKNKIV-----IL 553
Query: 145 TSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENANN 204
+ I +NN N + + E E + + + A + N++ + N+N K + N
Sbjct: 554 QNDIIHVNNQWSEDNKKNEMSIKELKEVIKKIQFDAKINMNNNKSDVINNMNNNKSDVIN 613
Query: 205 QITENKTQAITNIN 218
+ NK+ I N++
Sbjct: 614 NMNNNKSDVINNMS 627
>ref|NP_373997.1| (NC_002745) fibrinogen-binding protein A, clumping factor
[Staphylococcus aureus subsp. aureus N315]
dbj|BAB41975.1| (AP003131) fibrinogen-binding protein A, clumping factor
[Staphylococcus aureus subsp. aureus N315]
Length = 989
Score = 42.0 bits (97), Expect = 0.005
Identities = 41/168 (24%), Positives = 66/168 (38%), Gaps = 10/168 (5%)
Query: 58 VLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSAT 117
+L S + + N + S S E +N S+ K + SD TS TN E S
Sbjct: 31 LLSSKEADASENSVTQSDSASNESKSNDSSSVSAAPKTDDTNVSDTKTSSNTNNGETSVA 90
Query: 118 LN-ANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQA 176
N A E +S + T T+ N A A Q ++ T + E +NQ
Sbjct: 91 QNPAQQETTQSSSTNATTEETPVTGEATTTTT---NQANTPATTQ--SSNTNAEELVNQT 145
Query: 177 KTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQS 224
+NE T+N T ++++N + + N + T + N+S
Sbjct: 146 ----SNETTSNDTNTVSSVNSPQNSTNAENVSTTQDTSTEATPSNNES 189
>ref|NP_015530.1| (NC_001148) subtelomerically-encoded DNA helicase; Ypr204wp
[Saccharomyces cerevisiae]
pir||S65341 probable membrane protein YPR204w - yeast (Saccharomyces
cerevisiae)
emb|CAA97896.1| (Z73541) ORF YPR204w [Saccharomyces cerevisiae]
Length = 1032
Score = 42.0 bits (97), Expect = 0.005
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Query: 104 NTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNN---ARDSANN 160
NTS T E S T TE+ S I T T+ N +S N+
Sbjct: 538 NTSATTTESTDSNTSATTTESTNSSTNATTTASINVRTSATTTESTNSNTNATTTESTNS 597
Query: 161 QITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENAN--NQITENKTQAITNIN 218
A TE + A T+A+ + N T + AKE+AN +N+ +T+IN
Sbjct: 598 STNATTTEGTNSNTSATTTASTNSSTNATTTESTNASAKEDANKDGNAEDNRFHPVTDIN 657
Query: 219 E 219
+
Sbjct: 658 K 658
>ref|NP_371335.1| (NC_002758) fibrinogen-binding protein [Staphylococcus aureus
subsp. aureus Mu50]
dbj|BAB56973.1| (AP003360) fibrinogen-binding protein [Staphylococcus aureus subsp.
aureus Mu50]
Length = 935
Score = 42.0 bits (97), Expect = 0.005
Identities = 41/168 (24%), Positives = 66/168 (38%), Gaps = 10/168 (5%)
Query: 58 VLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSAT 117
+L S + + N + S S E +N S+ K + SD TS TN E S
Sbjct: 31 LLSSKEADASENSVTQSDSASNESKSNDSSSVSAAPKTDDTNVSDTKTSSNTNNGETSVA 90
Query: 118 LN-ANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQA 176
N A E +S + T T+ N A A Q ++ T + E +NQ
Sbjct: 91 QNPAQQETTQSSSTNATTEETPVTGEATTTTT---NQANTPATTQ--SSNTNAEELVNQT 145
Query: 177 KTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQS 224
+NE T+N T ++++N + + N + T + N+S
Sbjct: 146 ----SNETTSNDTNTVSSVNSPQNSTNAENVSTTQDTSTEATPSNNES 189
>gb|AAF50744.1| (AE003565) CG10542 gene product [Drosophila melanogaster]
Length = 1031
Score = 42.0 bits (97), Expect = 0.005
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 15/137 (10%)
Query: 75 LRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNA---NTENIKSEIKK 131
L+N L+ ++ KMKEY+ D +T+ T E+ ++ + E I K
Sbjct: 237 LQNLNTSLHEKFHTMSLKMKEYQ----DAHTAKETENAELKNQIDELQYDLEKIHCRNDK 292
Query: 132 LENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQA 191
LEN L E +L +QI+ N + KT + A TS N+++ +
Sbjct: 293 LENHLAEAIEKLKAYHQIY-----GDPNKSTNSAKTPTTTGSGGATTSVNSQLLEELQKE 347
Query: 192 LTNINEAKENANNQITE 208
L E +E ANN++ E
Sbjct: 348 L---EEYRELANNRLQE 361
>ref|NP_011429.1| (NC_001139) coiled-coil protein involved in spindle-assembly
checkpoint; Mad1p [Saccharomyces cerevisiae]
sp|P40957|MAD1_YEAST Spindle assembly checkpoint component MAD1 (Mitotic MAD1 protein)
pir||A57276 MAD1 protein - yeast (Saccharomyces cerevisiae)
gb|AAA91620.1| (U14632) Mad1p [Saccharomyces cerevisiae]
emb|CAA96791.1| (Z72608) ORF YGL086w [Saccharomyces cerevisiae]
Length = 749
Score = 42.0 bits (97), Expect = 0.005
Identities = 45/202 (22%), Positives = 86/202 (42%), Gaps = 26/202 (12%)
Query: 20 VKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSI 79
+K + +E+ + L+ N + + ++LK + LE SL F E LR +
Sbjct: 404 LKLLNDEMALERNQILDLNKNYENNI-VNLKRLNHELEQQKSLSF-----EECRLLREQL 457
Query: 80 EWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIET 139
+ L +A + +++ E S+ N + N + T TE++ +E+KKL +QL+
Sbjct: 458 DGLYSAQNNALLEVENSETHASNKNVNEDMNN--LIDTYKNKTEDLTNELKKLNDQLLSN 515
Query: 140 TTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAK 199
+ + T R ++QI N ++ L L S + E++ QT
Sbjct: 516 SNDVETQ-----RKKRKLTSDQIGLNYSQRLNELQLENVSVSRELSKAQTTI-------- 562
Query: 200 ENANNQITENKTQAITNINEAK 221
Q+ + K + +T + E K
Sbjct: 563 -----QLLQEKLEKLTKLKEKK 579
>ref|NP_013033.1| (NC_001144) Hypothetical ORF; Yll067cp [Saccharomyces cerevisiae]
pir||S64819 probable membrane protein YLL067c - yeast (Saccharomyces
cerevisiae)
emb|CAA97522.1| (Z73172) ORF YLL067c [Saccharomyces cerevisiae]
Length = 1205
Score = 41.6 bits (96), Expect = 0.007
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Query: 104 NTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNN---ARDSANN 160
NTS T E S T TE+ S I T T+ N +S N+
Sbjct: 746 NTSATTTESTDSNTSATTTESTDSSTNATTTASINVRTSATTTESTNSNTNATTTESTNS 805
Query: 161 QITANKTESLEALNQAKTSANNEITANQTQALTNINEAKENAN--NQITENKTQAITNIN 218
A TE + A T+A+ + N T + AKE+AN +N+ +T+IN
Sbjct: 806 STNATTTEGTNSNTSATTTASTNSSTNATTTESTNASAKEDANKDGNAEDNRFHPVTDIN 865
Query: 219 E 219
+
Sbjct: 866 K 866
>ref|NP_212346.1| (NC_001318) B. burgdorferi predicted coding region BB0212 [Borrelia
burgdorferi]
pir||D70126 hypothetical protein BB0212 - Lyme disease spirochete
gb|AAC66598.1| (AE001131) B. burgdorferi predicted coding region BB0212 [Borrelia
burgdorferi]
Length = 344
Score = 41.6 bits (96), Expect = 0.007
Identities = 45/181 (24%), Positives = 82/181 (44%), Gaps = 32/181 (17%)
Query: 70 EIDSSLRNSIEWLN------NAGESLKTKM---KEYEGFFSDFNTSMRTN-----EQEVS 115
E+ S++ N I +N + + TK + +E ++F+ + + N E ++
Sbjct: 147 EVSSTINNIINMINVYKISKEFEKQVFTKYYPSENFESIMNEFSLNKKLNNVIVKEFKII 206
Query: 116 ATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKT-------- 167
+ N +NIK EIK ++I T+ + +I+ N + N IT NK
Sbjct: 207 NEIKTNIKNIKEEIK----EIISTSKK----EKIYKKNTIKNEINVITKNKENILKKIAE 258
Query: 168 ESLEALNQAKTSANNEITANQTQALTNINEAKENANNQITE-NKTQAITNINEAKNQSLS 226
E +E + K +A ++ Q + IN+ N NN + + K + I NI + K Q+L+
Sbjct: 259 EFIEITKKDKMTAKTNAISSIIQKIEKINQKILNLNNDLIKITKQEEIKNIQQ-KIQALT 317
Query: 227 K 227
K
Sbjct: 318 K 318
>gb|AAM43658.1| (AC117177) RACGAP PROTEIN [Dictyostelium discoideum]
Length = 1125
Score = 41.6 bits (96), Expect = 0.007
Identities = 33/146 (22%), Positives = 57/146 (38%), Gaps = 13/146 (8%)
Query: 78 SIEWLNNAGESLKTKMKEYE-GFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQL 136
SI+ LN ++K ++++++ F + R N++E+ L +KS I Q
Sbjct: 753 SIDELNEEKSAIKKELRDFDTNFKRQYGQLPRKNDKEIMRPLYIRYREVKSLIDLKSPQS 812
Query: 137 IETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNIN 196
+ +T L+N+ + I+ + + SL + + NN N N N
Sbjct: 813 VTST----------LSNSSSLPSTPISLSSSNSLNKSQPSNNNNNNNNNNNNNNNANNTN 862
Query: 197 EAKENANNQITENKTQAITNINEAKN 222
N NN N NIN N
Sbjct: 863 TNNSNNNNNNNNNNNN--NNINNNSN 886
>pir||S41539 fibrinogen-binding protein - Staphylococcus aureus
emb|CAA79304.1| (Z18852) clumping factor [Staphylococcus aureus]
Length = 933
Score = 41.6 bits (96), Expect = 0.007
Identities = 47/172 (27%), Positives = 71/172 (40%), Gaps = 14/172 (8%)
Query: 58 VLLSLDFFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSAT 117
+L S + + N + S S E +N S+ K + SD TS TN E S
Sbjct: 31 LLSSKEADASENSVTQSDSASNESKSNDSSSVSAAPKTDDTNVSDTKTSSNTNNGETSVA 90
Query: 118 LN-ANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQA 176
N A E +S + T T+ N A A Q ++ T + E +NQ
Sbjct: 91 QNPAQQETTQSSSTNATTEETPVTGEATTTTT---NQANTPATTQ--SSNTNAEELVNQT 145
Query: 177 KTSANNEITANQTQALTNINEAKE--NANNQIT--ENKTQAITNINEAKNQS 224
+NE T N T ++++N + NA N T + T+A + NE+ QS
Sbjct: 146 ----SNETTFNDTNTVSSVNSPQNSTNAENVSTTQDTSTEATPSNNESAPQS 193
>ref|NP_349097.1| (NC_003030) Methyl-accepting chemotaxis protein [Clostridium
acetobutylicum]
gb|AAK80437.1|AE007747_6 (AE007747) Methyl-accepting chemotaxis protein [Clostridium
acetobutylicum]
Length = 320
Score = 41.6 bits (96), Expect = 0.007
Identities = 47/225 (20%), Positives = 89/225 (38%), Gaps = 35/225 (15%)
Query: 23 ITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWL 82
I + LK+ N+ N N++ E L K + +++ DF +E D+S ++ +
Sbjct: 16 IEDTTLKESDNS-NINNIIKETTILITKKLTELMDA--EKDFINTLDETDASYNSTNTSI 72
Query: 83 NNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKLENQLIETTTR 142
N S+K +FN+S++ N E S + +N K I + EN ++ T
Sbjct: 73 NTVSTSVK-----------EFNSSIQ-NLAETSKVIKDCIQNGKPLINQGENSIVSVNTE 120
Query: 143 LLTSYQI---FLNNARDSANNQITANK-----------------TESLEALNQAKTSANN 182
++ F N ++ +N T N S+EA +
Sbjct: 121 FISIVDFVKSFETNFKELQSNIETINSFSKKIIEISEQTDMLSLNASIEAARAGEAGRGF 180
Query: 183 EITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSK 227
+ AN+ + L N + N+ +N + + ++N + LSK
Sbjct: 181 SVVANEVKNLANETKHLSNSIASNIKNISVSACDLNNNLSNILSK 225
>ref|NP_611787.1| (NM_137943) CG3493 gene product [Drosophila melanogaster]
Length = 1489
Score = 41.2 bits (95), Expect = 0.009
Identities = 46/203 (22%), Positives = 94/203 (45%), Gaps = 17/203 (8%)
Query: 27 LLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNAG 86
LL Q + A+++ ++EL + ++ E L L+ + ++ ++ ++ + L
Sbjct: 317 LLAQTKQAIHT------ELELKDTEVRKLQEKLKQLESQRESH--NNEVKEQFKKLQATK 368
Query: 87 ESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSE----IKKLENQLIETTTR 142
+ + K+ E + S EQ+V TL A E I+ E +K L+ Q + T+
Sbjct: 369 QEVDAKLMATEHLLNTLKESYAIKEQQV-VTLEAQLEAIRVENEQKVKDLQKQNEDRNTQ 427
Query: 143 LLTSYQIF--LNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKE 200
S + L A A +Q+ + K + LE+L + + ++ + Q L + + E
Sbjct: 428 ASDSSEQLKKLQAAVQDAESQLLS-KDQLLESLRSEQAAKEQQLKHLKEQ-LGKLKQENE 485
Query: 201 NANNQITENKTQAITNINEAKNQ 223
N +++ ENK + + NEA++Q
Sbjct: 486 NYLDKLRENKKSSDSQTNEAQDQ 508
>ref|NP_416433.1| (NC_000913) flagellar biosynthesis; flagellin, filament structural
protein [Escherichia coli K12]
sp|P04949|FLIC_ECOLI Flagellin
pir||FLEC flagellin - Escherichia coli (strain K-12)
gb|AAA23950.1| (M14358) flagellin [Escherichia coli]
dbj|BAA15751.1| (D90833) Flagellin [Escherichia coli]
gb|AAC74990.1| (AE000285) flagellar biosynthesis; flagellin, filament structural
protein [Escherichia coli K12]
dbj|BAA85088.1| (AB028479) flagellin [Escherichia coli]
Length = 498
Score = 41.2 bits (95), Expect = 0.009
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 114 VSATLNANTENI--KSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANK-TESL 170
++ +N N+ ++ ++ I K ++ L + RL + +I N+A+D A Q AN+ T ++
Sbjct: 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRI--NSAKDDAAGQAIANRFTSNI 58
Query: 171 EALNQAKTSANNEITANQTQ--ALTNINEAKENANNQITENKTQAITNINEAKNQS 224
+ L QA +AN+ I+ QT AL+ IN N ++ E QA T N + S
Sbjct: 59 KGLTQAARNANDGISVAQTTEGALSEIN----NNLQRVRELTVQATTGTNSESDLS 110
>emb|CAA37894.1| (X53947) myosin heavy chain type II [Saccharomyces cerevisiae]
prf||1806328A myosin II:SUBUNIT=heavy chain [Saccharomyces cerevisiae]
Length = 1850
Score = 41.2 bits (95), Expect = 0.009
Identities = 43/212 (20%), Positives = 91/212 (42%), Gaps = 14/212 (6%)
Query: 22 EITNELLKQLQNALNS---------NSLFSEQVELSLKGIVRILEVLLSLDFFKNANEID 72
++ NE+ K+L++ +NS + L S + +L +K + +++ ++ +
Sbjct: 1037 KLENEI-KRLKDVINSKEEEIKSFNDKLSSSEEDLDIKDVTLEKNSNIAISRLQSLVTEN 1095
Query: 73 SSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKL 132
S LR+ E E+L ++K E + +++E+ AT + ++ SE K+
Sbjct: 1096 SDLRSKNENFKKEKEALNNQLKNKESELLKMKEKIDNHKKEL-ATFSKQRDDACSEHGKI 1154
Query: 133 ENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQAL 192
+ ET +L T Y + ++ +N T K E + N S N+E+ + +A
Sbjct: 1155 TAESKETRIQL-TEYNLIYQKIKEEYSNFQTRKKEEQDKERNSLVESLNDELKVKEWKAR 1213
Query: 193 TNINEAKENANNQITENKTQAITNINEAKNQS 224
+ K + N + TNI+ + +
Sbjct: 1214 CHRKYLKSILKQKNIRNSVE--TNISSTRRST 1243
>gb|AAF46990.2| (AE003460) CG3493-PA [Drosophila melanogaster]
Length = 1489
Score = 41.2 bits (95), Expect = 0.009
Identities = 46/203 (22%), Positives = 94/203 (45%), Gaps = 17/203 (8%)
Query: 27 LLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNSIEWLNNAG 86
LL Q + A+++ ++EL + ++ E L L+ + ++ ++ ++ + L
Sbjct: 317 LLAQTKQAIHT------ELELKDTEVRKLQEKLKQLESQRESH--NNEVKEQFKKLQATK 368
Query: 87 ESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSE----IKKLENQLIETTTR 142
+ + K+ E + S EQ+V TL A E I+ E +K L+ Q + T+
Sbjct: 369 QEVDAKLMATEHLLNTLKESYAIKEQQV-VTLEAQLEAIRVENEQKVKDLQKQNEDRNTQ 427
Query: 143 LLTSYQIF--LNNARDSANNQITANKTESLEALNQAKTSANNEITANQTQALTNINEAKE 200
S + L A A +Q+ + K + LE+L + + ++ + Q L + + E
Sbjct: 428 ASDSSEQLKKLQAAVQDAESQLLS-KDQLLESLRSEQAAKEQQLKHLKEQ-LGKLKQENE 485
Query: 201 NANNQITENKTQAITNINEAKNQ 223
N +++ ENK + + NEA++Q
Sbjct: 486 NYLDKLRENKKSSDSQTNEAQDQ 508
>gb|AAD43468.1|AF113609_1 (AF113609) UspA2 [Moraxella catarrhalis]
Length = 613
Score = 41.2 bits (95), Expect = 0.009
Identities = 47/227 (20%), Positives = 96/227 (41%), Gaps = 27/227 (11%)
Query: 19 EVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEID-SSLRN 77
E+ T E+ K L+N + ++ ++ ++ + I + + L ++ + D +L+N
Sbjct: 187 EIHAYTEEVNKTLENLITNSVKNTDNIDKNKADIDNNINHIYELAQQQDQHSSDIKTLKN 246
Query: 78 SIE--WLNNAGESLKTKM---KEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKL 132
++E L +G + K K+ + S+ + + T++IK+ +
Sbjct: 247 NVEEGLLELSGHLIDQKADLTKDIKALESNVEEGLLDLSGRLLDQKADLTKDIKALESNV 306
Query: 133 ENQLIETTTRLLTSYQIFLNNARD--------SANNQITANKTESLEALNQAKT------ 178
E L++ + RLL N D +Q +TE+++ALN+A +
Sbjct: 307 EEGLLDLSGRLLDQKADIAQNQTDIQDLAAYNELQDQYAQKQTEAIDALNKASSENTQNI 366
Query: 179 ---SANNEI----TANQTQALTNINEAKENANNQITENKTQAITNIN 218
+A NE+ QT+A+ +N+A I +N+ NIN
Sbjct: 367 EDLAAYNELQDAYAKQQTEAIDALNKASSENTQNIAKNQADIANNIN 413
>ref|NP_149321.1| (NC_001988) Hypothetical protein [Clostridium acetobutylicum]
gb|AAK76903.1|AE001438_156 (AE001438) Hypothetical protein [Clostridium acetobutylicum]
Length = 433
Score = 41.2 bits (95), Expect = 0.009
Identities = 47/216 (21%), Positives = 84/216 (38%), Gaps = 32/216 (14%)
Query: 19 EVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLDFFKNANEIDSSLRNS 78
+VK I N LQN +N+N+ + + ++ + D K N S L+N
Sbjct: 75 DVKTI-NATTVDLQNQINTNNTTITNEITDINTSITKVDTKID-DDVKTINATTSDLQNQ 132
Query: 79 IEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSAT-------LNANTENIKSEIKK 131
I +NN ++ ++ + ++ +T + + + ++AT +N N NI +I
Sbjct: 133 IN-VNNT--NITKQITDINTSITNVDTKVDEDIKTINATTTDLQNQINVNNTNITKQITD 189
Query: 132 LENQL----------IETTTRLLTSYQIFLNNARDSANNQITANKT----------ESLE 171
+ + I+T T Q +N + NQIT T E ++
Sbjct: 190 INTSITNVDTKVDEDIKTINATTTDLQNQINVNNTTITNQITDINTSITKVDTKIDEDVK 249
Query: 172 ALNQAKTSANNEITANQTQALTNINEAKENANNQIT 207
A+N ++IT N I + NQIT
Sbjct: 250 AINSTTADLQSQITVNNNTLTNEIQTVNTSLQNQIT 285
>ref|NP_663197.1| (NC_004062) hypothetical protein [Phthorimaea operculella
granulovirus]
gb|AAM70230.1| (AF499596) hypothetical protein [Phthorimaea operculella
granulovirus]
Length = 675
Score = 41.2 bits (95), Expect = 0.009
Identities = 40/195 (20%), Positives = 77/195 (38%), Gaps = 22/195 (11%)
Query: 19 EVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSL------DFFKNANEID 72
E+K EL K LN EQ +L + + L+ + + KN E
Sbjct: 213 ELKMQIEELTKYADQELNR---LKEQTDLEISNYKKQLDDCTTELNDCRNELSKNKTEYQ 269
Query: 73 SSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTENIKSEIKKL 132
+ ++N +W+N + +T++ E + + + EQ+V + I +++K
Sbjct: 270 NYIKNCKKWINECKTNAQTEINESKTKYQ------KELEQKVELYIRQKENEIHDDLQKK 323
Query: 133 ENQLIETTTRLLTSYQIFLNNARDSANNQIT---ANKTESLEALNQAKTSANNEITANQT 189
Q I+ L + F RD + Q+ K + L+ LN+ + + A T
Sbjct: 324 HTQKIDG----LVQFYDFQIKERDQSIKQLKYELEEKDKRLDQLNEENSKIGENLNATIT 379
Query: 190 QALTNINEAKENANN 204
++E +N N+
Sbjct: 380 NLQKELSETTKNLNS 394
>ref|NP_478344.1| (NC_003265) ORF1~similar to replication-associated protein of
Staphylococcus aureus pI9789
dbj|BAB78399.1| (AP003088) ORF1~similar to replication-associated protein of
Staphylococcus aureus pI9789
Length = 263
Score = 41.2 bits (95), Expect = 0.009
Identities = 40/151 (26%), Positives = 68/151 (44%), Gaps = 18/151 (11%)
Query: 64 FFKNANEIDSSLRNSIEWLNNAGESLKTKMKEYEGFFSDFNTSMRTNEQEVSATLNANTE 123
F +N E + + N+ +N+ ESLKTK+ E E F T + +E+ + E
Sbjct: 75 FNENTAEFEKHIYNN----SNSFESLKTKVNELEKQIEIFETRAKNDEKYI--------E 122
Query: 124 NIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANNE 183
N+ ++ + +N + T +LL + QI + Q N+ E LN + +A N+
Sbjct: 123 NLTKQLDQ-QNSNVNTLNKLLENQQILA--LESNKKIQKLENQLEEERQLNYSFDTATND 179
Query: 184 ITANQTQALTNINEAKENANNQITENKTQAI 214
+ Q T E +N+N Q + K Q I
Sbjct: 180 RQSINPQEAT-FTEEYQNSNQQ--QKKIQPI 207
>ref|NP_472985.1| (NC_000910) hypothetical protein [Plasmodium falciparum]
pir||D71618 hypothetical protein PFB0285c - malaria parasite (Plasmodium
falciparum)
gb|AAC71846.1| (AE001385) hypothetical protein [Plasmodium falciparum 3D7]
Length = 1436
Score = 41.2 bits (95), Expect = 0.009
Identities = 36/154 (23%), Positives = 62/154 (39%), Gaps = 25/154 (16%)
Query: 66 KNANEIDSSLRNSIEWLNNAGESLKTKM---KEYEGFFSDFNTSMRTNEQEVSATLNANT 122
KN N I + ++I++LNN T M K + F+ ++ SMR N
Sbjct: 135 KNDNTI---INSNIKYLNN-NNIFNTNMVPQKNHTQIFNPYDKSMR------------NI 178
Query: 123 ENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLEALNQAKTSANN 182
+ + L+N + + +FL N R +NN + N+ + N + N
Sbjct: 179 QLYNKAVSFLKNDGDINSKKNTHDNLMFLKNIRSKSNNNLIVNRKITNHVTNNVISGMTN 238
Query: 183 EITANQTQALTNINEAKENANNQITENKTQAITN 216
++ +TN N + IT N T ++TN
Sbjct: 239 KVIGGMASGMTN------NVTSSITNNMTSSMTN 266
>gb|AAF32259.1|AF169320_1 (AF169320) flagellin [Escherichia coli]
Length = 420
Score = 41.2 bits (95), Expect = 0.009
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 114 VSATLNANTENI--KSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANK-TESL 170
++ +N N+ ++ ++ I K ++ L + RL + +I N+A+D A Q AN+ T ++
Sbjct: 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRI--NSAKDDAAGQAIANRFTSNI 58
Query: 171 EALNQAKTSANNEITANQTQ--ALTNINEAKENANNQITENKTQAITNINEAKNQS 224
+ L QA +AN+ I+ QT AL+ IN N ++ E QA T N + S
Sbjct: 59 KGLTQAARNANDGISVAQTTEGALSEIN----NNLQRVRELTVQATTGTNSESDLS 110
>ref|NP_031494.1| (NM_007468) apolipoprotein A-IV [Mus musculus]
pir||A25281 apolipoprotein A-IV precursor - mouse
gb|AAA37253.1| (M13966) apolipoprotein A-IV [Mus musculus]
Length = 394
Score = 41.2 bits (95), Expect = 0.009
Identities = 43/237 (18%), Positives = 88/237 (36%), Gaps = 17/237 (7%)
Query: 4 YPNLPNSALEITEQPEVKEITNELLKQLQNALNSNSLFSEQVELSLKGIVRILEVLLSLD 63
+ L N+A E EQ + ++T +L ++ L S +++ V L V V LS
Sbjct: 34 FTQLSNNAKEAVEQFQKTDVTQQLSTLFKDKLGDASTYADGVHNKLVPFV----VQLSGH 89
Query: 64 FFKNANEIDSSLRNSIEWLNNA------------GESLKTKMKEYEGFFSDFNTSMRTNE 111
K + ++ +E L + GE+++ + + + D + T
Sbjct: 90 LAKETERVKEEIKKELEDLRDRMMPHANKVTQTFGENMQKLQEHLKPYAVDLQDQINTQT 149
Query: 112 QEVSATLNANTENIKSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANKTESLE 171
QE+ L + +++ IK+ + L + L T+ + N + +T
Sbjct: 150 QEMKLQLTPYIQRMQTTIKENVDNLHTSMMPLATNLKDKFNRNMEELKGHLTPRANRLKA 209
Query: 172 ALNQAKTSANNEITANQTQALTNINEAKENANNQITENKTQAITNINEAKNQSLSKH 228
++Q + +N E Q+ +N + T ++ AK L K+
Sbjct: 210 TIDQNLEDLRRSLAPLTVGVQEKLNHQMEGLAFQMKKNAEELQTKVS-AKIDQLQKN 265
>emb|CAA35488.1| (X17440) hsg48 [Escherichia coli]
Length = 498
Score = 41.2 bits (95), Expect = 0.009
Identities = 35/116 (30%), Positives = 61/116 (52%), Gaps = 11/116 (9%)
Query: 114 VSATLNANTENI--KSEIKKLENQLIETTTRLLTSYQIFLNNARDSANNQITANK-TESL 170
++ +N N+ ++ ++ I K ++ L + RL + +I N+A+D A Q AN+ T ++
Sbjct: 1 MAQVINTNSLSLITQNNINKNQSALSSSIERLSSGLRI--NSAKDDAAGQAIANRFTSNI 58
Query: 171 EALNQAKTSANNEITANQTQ--ALTNINEAKENANNQITENKTQAITNINEAKNQS 224
+ L QA +AN+ I+ QT AL+ IN N ++ E QA T N + S
Sbjct: 59 KGLTQAARNANDGISVAQTTEGALSEIN----NNLQRVRELTVQATTGTNSESDLS 110
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.304 0.120 0.301
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,958,698
Number of Sequences: 1026957
Number of extensions: 4082536
Number of successful extensions: 24731
Number of sequences better than 1.0e-02: 83
Number of HSP's better than 0.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 24294
Number of HSP's gapped (non-prelim): 315
length of query: 228
length of database: 324,149,939
effective HSP length: 117
effective length of query: 111
effective length of database: 203,995,970
effective search space: 22643552670
effective search space used: 22643552670
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 95 (41.2 bits)