BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645731|ref|NP_207908.1| conserved hypothetical
secreted protein [Helicobacter pylori 26695]
(256 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207908.1| (NC_000915) conserved hypothetical secrete... 522 e-147
gb|AAB47276.1| (U86608) 29 kDa protein [Helicobacter pylori] 516 e-145
ref|NP_223762.1| (NC_000921) putative [Helicobacter pylori ... 499 e-141
ref|NP_207889.1| (NC_000915) conserved hypothetical secrete... 120 1e-26
ref|NP_223741.1| (NC_000921) putative [Helicobacter pylori ... 119 4e-26
ref|NP_222941.1| (NC_000921) putative [Helicobacter pylori ... 116 3e-25
ref|NP_207033.1| (NC_000915) conserved hypothetical secrete... 110 1e-23
gb|AAL47062.1|AF326614_1 (AF326614) JHP318-like protein [He... 107 1e-22
ref|NP_661851.1| (NC_002932) conserved hypothetical protein... 107 1e-22
pir||T46587 hypothetical protein [imported] - Vogesella ind... 106 2e-22
gb|AAB63298.1| (AF008565) Orf2 [Helicobacter pylori] 106 3e-22
gb|AAC24210.1| (AF053708) cysteine-rich protein; HcpA [Heli... 106 3e-22
ref|NP_222918.1| (NC_000921) putative [Helicobacter pylori ... 105 5e-22
ref|NP_207009.1| (NC_000915) conserved hypothetical secrete... 105 5e-22
ref|NP_586349.1| (NC_003237) similarity to SKT5 PROTEIN [En... 104 1e-21
ref|NP_223037.1| (NC_000921) putative [Helicobacter pylori ... 104 1e-21
ref|NP_415177.1| (NC_000913) orf, hypothetical protein [Esc... 101 7e-21
sp|P77234|YBEQ_ECOLI Hypothetical protein ybeQ 101 7e-21
ref|NP_564049.1| (NM_101684) expressed protein [Arabidopsis... 101 9e-21
ref|NP_460716.1| (NC_003197) putative TPR repeat protein [S... 100 1e-20
gb|AAD05210.1| (AF063095) SELlL [Mus musculus] >gi|20073079... 100 2e-20
ref|XP_127076.1| (XM_127076) similar to Sel-1 homolog precu... 100 2e-20
ref|NP_005056.3| (NM_005065) sel-1 suppressor of lin-12-lik... 100 2e-20
gb|AAF29413.1|AF052059_1 (AF052059) SEL1L [Homo sapiens] >g... 100 2e-20
gb|AAK64159.1| (AY039982) unknown protein [Arabidopsis thal... 100 2e-20
dbj|BAB12403.1| (AB048195) SEL1L [Mesocricetus auratus] 100 2e-20
ref|NP_651179.1| (NM_142922) BcDNA:LD23587 gene product [Dr... 100 2e-20
ref|NP_455743.1| (NC_003198) putative secreted protein [Sal... 100 3e-20
gb|AAD41587.1|AF057704_3 (AF057704) enhanced entry protein ... 100 3e-20
gb|AAL47059.1|AF326610_1 (AF326610) JHP318-like protein [He... 100 3e-20
ref|XP_046437.2| (XM_046437) similar to dJ842G6.2 (novel pr... 99 4e-20
ref|NP_273467.1| (NC_003112) conserved hypothetical protein... 97 2e-19
gb|AAL47058.1|AF326608_1 (AF326608) JHP318-like protein [He... 96 4e-19
ref|NP_222869.1| (NC_000921) putative [Helicobacter pylori ... 95 6e-19
gb|EAA06387.1| (AAAB01008846) agCP13101 [Anopheles gambiae ... 94 1e-18
ref|NP_223289.1| (NC_000921) putative [Helicobacter pylori ... 91 2e-17
gb|AAM66150.1|AF326629_1 (AF326629) JHP1437-like protein [H... 90 2e-17
gb|AAF01236.1|AF185288_1 (AF185288) immunoreactive protein ... 89 4e-17
ref|NP_206959.1| (NC_000915) conserved hypothetical secrete... 89 6e-17
ref|NP_245305.1| (NC_002663) unknown [Pasteurella multocida... 89 6e-17
gb|AAM66149.1|AF326628_1 (AF326628) JHP1437-like protein [H... 88 8e-17
ref|NP_246550.1| (NC_002663) unknown [Pasteurella multocida... 87 1e-16
ref|NP_506144.1| (NM_073743) Yeast hypothetical gene L8167.... 87 1e-16
gb|AAC47112.1| (U50828) sel-1 gene product [Caenorhabditis ... 87 1e-16
ref|NP_286370.1| (NC_002655) ybeQ gene product [Escherichia... 87 1e-16
ref|NP_459646.1| (NC_003197) putative TPR repeat protein [S... 87 2e-16
ref|NP_177498.1| (NM_106015) hypothetical protein [Arabidop... 86 4e-16
ref|NP_207422.1| (NC_000915) hypothetical protein [Helicoba... 84 1e-15
emb|CAB65792.2| (AL109657) dJ842G6.2 (novel protein imilar ... 84 1e-15
gb|AAM66156.1|AF326634_1 (AF326634) JHP1437-like protein [H... 82 4e-15
ref|NP_284256.1| (NC_003116) hypothetical protein [Neisseri... 82 7e-15
gb|AAM66155.1|AF326633_1 (AF326633) JHP1437-like protein [H... 82 7e-15
ref|NP_274346.1| (NC_003112) conserved hypothetical protein... 81 1e-14
ref|NP_420846.1| (NC_002696) conserved hypothetical protein... 79 4e-14
ref|NP_249051.1| (NC_002516) hypothetical protein [Pseudomo... 78 8e-14
ref|NP_103302.1| (NC_002678) unknown protein [Mesorhizobium... 78 1e-13
gb|AAG30966.1|AC012396_2 (AC012396) hypothetical protein, 3... 77 1e-13
ref|NP_405544.1| (NC_003143) putative exported protein [Yer... 77 2e-13
ref|NP_224155.1| (NC_000921) putative [Helicobacter pylori ... 76 3e-13
ref|XP_003620.2| (XM_003620) similar to hypothetical protei... 75 9e-13
dbj|BAA92563.1| (AB037746) KIAA1325 protein [Homo sapiens] 75 9e-13
ref|NP_060879.1| (NM_018409) hypothetical protein DKFZp761O... 75 9e-13
ref|NP_102363.1| (NC_002678) hypothetical protein [Mesorhiz... 74 2e-12
ref|NP_518145.1| (NC_003295) PUTATIVE SIGNAL PEPTIDE PROTEI... 73 3e-12
ref|XP_132104.1| (XM_132104) similar to Sel-1 homolog precu... 73 3e-12
gb|AAH30908.1| (BC030908) Unknown (protein for IMAGE:450426... 71 1e-11
ref|XP_134130.1| (XM_134130) similar to Ank repeat containi... 71 1e-11
ref|NP_080554.1| (NM_026278) RIKEN cDNA 2310006J04 [Mus mus... 71 1e-11
gb|AAH26655.1| (BC026655) Similar to KIAA0746 protein [Mus ... 71 1e-11
ref|NP_455035.1| (NC_003198) conserved hypothetical protein... 70 2e-11
gb|AAL47060.1|AF326611_1 (AF326611) JHP318-like protein [He... 70 3e-11
ref|NP_638122.1| (NC_003902) conserved hypothetical protein... 69 4e-11
gb|AAH09945.1|AAH09945 (BC009945) Unknown (protein for IMAG... 69 5e-11
ref|XP_045277.1| (XM_045277) KIAA0746 protein [Homo sapiens] 69 5e-11
dbj|BAA34466.1| (AB018289) KIAA0746 protein [Homo sapiens] 69 5e-11
ref|NP_356872.1| (NC_003063) AGR_L_2168p [Agrobacterium tum... 68 8e-11
ref|NP_534243.1| (NC_003305) enhanced entry protein [Agroba... 68 8e-11
ref|NP_643252.1| (NC_003919) conserved hypothetical protein... 68 8e-11
ref|NP_539245.1| (NC_003317) TETRATRICOPEPTIDE REPEAT FAMIL... 68 1e-10
ref|XP_130572.1| (XM_130572) similar to dJ842G6.2 (novel pr... 67 2e-10
ref|NP_104918.1| (NC_002678) hypothetical protein [Mesorhiz... 67 2e-10
ref|NP_435252.1| (NC_003037) hypothetical protein [Sinorhiz... 66 4e-10
gb|AAC37164.1| (L05770) putative regulatory protein PobS [A... 65 5e-10
dbj|BAB22100.1| (AK002437) data source:SPTR, source key:Q14... 65 5e-10
ref|NP_286374.1| (NC_002655) orf, hypothetical protein [Esc... 65 7e-10
ref|NP_102763.1| (NC_002678) exopolysaccharide regulatory p... 65 7e-10
ref|NP_541444.1| (NC_003318) TETRATRICOPEPTIDE REPEAT FAMIL... 65 9e-10
ref|NP_253206.1| (NC_002516) hypothetical protein [Pseudomo... 65 9e-10
ref|NP_460954.1| (NC_003197) putative TPR repeat protein [S... 64 2e-09
ref|NP_415180.1| (NC_000913) orf, hypothetical protein [Esc... 64 2e-09
ref|NP_564992.1| (NM_105727) expressed protein [Arabidopsis... 63 4e-09
gb|AAH11926.1|AAH11926 (BC011926) Similar to KIAA0141 gene ... 62 5e-09
ref|NP_386885.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhiz... 62 5e-09
ref|NP_055588.1| (NM_014773) KIAA0141 gene product [Homo sa... 62 5e-09
gb|AAH07855.1|AAH07855 (BC007855) KIAA0141 gene product [Ho... 62 5e-09
gb|AAM66148.1|AF326627_1 (AF326627) JHP1437-like protein [H... 62 8e-09
gb|AAC38141.1| (AF039535) AlgK precursor [Pseudomonas aerug... 61 1e-08
ref|NP_252233.1| (NC_002516) alginate biosynthetic protein ... 61 1e-08
dbj|BAA19847.1| (AB003310) chitin synthase regulatory facto... 60 2e-08
ref|NP_106249.1| (NC_002678) unknown protein [Mesorhizobium... 60 2e-08
ref|NP_521481.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 60 2e-08
ref|NP_223186.1| (NC_000921) putative [Helicobacter pylori ... 60 2e-08
ref|NP_439767.1| (NC_000907) H. influenzae predicted coding... 59 5e-08
gb|AAM66151.1|AF326630_1 (AF326630) JHP1437-like protein [H... 59 5e-08
dbj|BAA23166.1| (D83080) mercuric resistance protein [Pseud... 58 9e-08
ref|NP_455032.1| (NC_003198) conserved hypothetical protein... 58 1e-07
ref|NP_207316.1| (NC_000915) conserved hypothetical protein... 58 1e-07
gb|EAA03532.1| (AAAB01008794) agCP14246 [Anopheles gambiae ... 57 1e-07
ref|NP_473246.1| (NC_000521) predicted using hexExon; MAL3P... 57 1e-07
gb|EAA08334.1| (AAAB01008879) agCP2877 [Anopheles gambiae s... 57 2e-07
pir||T38028 hypothetical protein SPAC1B3.10c - fission yeas... 57 2e-07
ref|NP_594794.1| (NC_003424) hypothetical protein [Schizosa... 57 2e-07
ref|NP_009492.1| (NC_001134) protoplast regeneration and ki... 57 3e-07
prf||1920224A skt5 gene [Saccharomyces cerevisiae] >gi|7422... 57 3e-07
gb|AAL47063.1|AF326616_1 (AF326616) JHP1024-like protein [H... 56 4e-07
ref|NP_459434.1| (NC_003197) putative TPR repeat protein [S... 55 6e-07
ref|NP_459433.1| (NC_003197) putative periplasmic protein [... 55 6e-07
ref|NP_283034.1| (NC_003116) hypothetical protein NMA0184 [... 55 1e-06
ref|NP_253774.1| (NC_002516) hypothetical protein [Pseudomo... 54 1e-06
gb|AAK54860.1| (AF304855) SEL1L [Rattus norvegicus] 54 2e-06
ref|NP_531202.1| (NC_003304) conserved hypothetical protein... 54 2e-06
ref|NP_592847.1| (NC_003424) similar to yeast protoplast re... 54 2e-06
ref|NP_585979.1| (NC_003234) similarity to HYPOTHETICAL PRO... 54 2e-06
ref|NP_353527.1| (NC_003062) AGR_C_883p [Agrobacterium tume... 54 2e-06
gb|AAC60564.1| (S65415) protoplast regeneration and killer ... 54 2e-06
ref|NP_540011.1| (NC_003317) EXOPOLYSACCHARIDE PRODUCTION N... 53 3e-06
ref|NP_384642.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhiz... 53 3e-06
ref|NP_253775.1| (NC_002516) hypothetical protein [Pseudomo... 53 3e-06
emb|CAA67370.1| (X98863) AlgK protein [Azotobacter vinelandii] 53 4e-06
ref|NP_281603.1| (NC_002163) putative periplasmic protein [... 52 6e-06
ref|NP_585810.1| (NC_003233) putative SKT5-like protein [En... 52 6e-06
ref|NP_207134.1| (NC_000915) hypothetical protein [Helicoba... 51 1e-05
ref|NP_252667.1| (NC_002516) hypothetical protein [Pseudomo... 51 1e-05
ref|NP_253773.1| (NC_002516) hypothetical protein [Pseudomo... 50 2e-05
ref|NP_354703.1| (NC_003062) AGR_C_3152p [Agrobacterium tum... 50 2e-05
sp|Q52822|EXOR_RHILV EXOPOLYSACCHARIDE PRODUCTION NEGATIVE ... 50 3e-05
ref|NP_421280.1| (NC_002696) hypothetical protein [Caulobac... 50 3e-05
ref|NP_596099.1| (NC_003423) very putative chitin synthase ... 49 5e-05
ref|NP_361071.1| (NC_003122) MerG protein [Plasmid pSB102] ... 48 1e-04
gb|AAH15313.1|AAH15313 (BC015313) hypothetical protein FLJ1... 47 2e-04
ref|NP_385624.1| (NC_003047) EXOPOLYSACCHARIDE BIOSYNTHESIS... 47 2e-04
ref|NP_013308.1| (NC_001144) HMG-CoA Reductase Degradation;... 47 3e-04
ref|NP_472966.1| (NC_000910) predicted membrane associated ... 47 3e-04
ref|NP_075565.1| (NM_023077) hypothetical protein FLJ12439 ... 47 3e-04
gb|AAG52341.1|AC011663_20 (AC011663) hypothetical protein; ... 47 3e-04
sp|P40608|MOTX_VIBPA Sodium-type polar flagellar protein mo... 46 3e-04
dbj|BAB63401.1| (AB070443) sodium-type flagellar motor comp... 46 4e-04
gb|AAK01327.1|AF265265_1 (AF265265) unknown [uncultured org... 45 6e-04
ref|NP_232229.1| (NC_002505) sodium-type flagellar protein ... 45 6e-04
ref|NP_662672.1| (NC_002932) conserved hypothetical protein... 45 6e-04
gb|AAK20021.1| (AF134839) sodium driven flagellar motor com... 45 6e-04
gb|AAL08823.1|AF308666_2 (AF308666) hypothetical polar orga... 45 6e-04
gb|AAK18801.1|AF305609_1 (AF305609) LMP1 [Borrelia burgdorf... 45 0.001
gb|AAK18803.1|AF305611_1 (AF305611) LMP1 [Borrelia burgdorf... 45 0.001
gb|AAK18793.1|AF305601_1 (AF305601) LMP1 [Borrelia burgdorf... 45 0.001
gb|AAK18791.1|AF305599_1 (AF305599) LMP1 [Borrelia burgdorf... 45 0.001
gb|AAK18800.1|AF305608_1 (AF305608) LMP1 [Borrelia burgdorf... 45 0.001
gb|AAK18797.1|AF305605_1 (AF305605) LMP1 [Borrelia burgdorf... 45 0.001
gb|AAK18799.1|AF305607_1 (AF305607) LMP1 [Borrelia burgdorf... 45 0.001
ref|NP_212344.1| (NC_001318) surface-located membrane prote... 45 0.001
ref|NP_290711.1| (NC_002655) orf, hypothetical protein [Esc... 45 0.001
gb|AAM63376.1| (AY086172) unknown [Arabidopsis thaliana] 44 0.001
ref|NP_565600.1| (NM_128115) expressed protein [Arabidopsis... 44 0.001
ref|NP_214303.1| (NC_000918) hypothetical protein [Aquifex ... 44 0.002
ref|NP_011022.1| (NC_001137) sporulation-specific homolog o... 44 0.002
ref|NP_458583.1| (NC_003198) putative exported protein [Sal... 44 0.002
gb|AAK18795.1|AF305603_1 (AF305603) LMP1 [Borrelia burgdorf... 44 0.002
ref|NP_010078.1| (NC_001136) Hypothetical ORF; Ydl203cp [Sa... 43 0.003
ref|NP_463149.1| (NC_003197) putative TPR repeat protein [S... 42 0.006
ref|XP_131544.1| (XM_131544) RIKEN cDNA 2010305A19 [Mus mus... 42 0.006
ref|NP_522192.1| (NC_003296) PROBABLE LIPOPROTEIN [Ralstoni... 42 0.006
dbj|BAB25716.1| (AK008518) data source:SPTR, source key:Q9H... 42 0.006
ref|NP_349017.1| (NC_003030) TPR repeats containing protein... 42 0.008
>ref|NP_207908.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||E64659 conserved hypothetical secreted protein HP1117 - Helicobacter
pylori (strain 26695)
gb|AAD08161.1| (AE000618) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 256
Score = 522 bits (1344), Expect = e-147
Identities = 256/256 (100%), Positives = 256/256 (100%)
Query: 1 MGYASKLALKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNG 60
MGYASKLALKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNG
Sbjct: 1 MGYASKLALKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNG 60
Query: 61 EPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK 120
EPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK
Sbjct: 61 EPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK 120
Query: 121 AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY 180
AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY
Sbjct: 121 AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY 180
Query: 181 YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKAC 240
YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKAC
Sbjct: 181 YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKAC 240
Query: 241 DFDIDKNCKKKNTSSR 256
DFDIDKNCKKKNTSSR
Sbjct: 241 DFDIDKNCKKKNTSSR 256
>gb|AAB47276.1| (U86608) 29 kDa protein [Helicobacter pylori]
Length = 256
Score = 516 bits (1328), Expect = e-145
Identities = 253/256 (98%), Positives = 254/256 (98%)
Query: 1 MGYASKLALKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNG 60
MGYASKLALKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNG
Sbjct: 1 MGYASKLALKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNG 60
Query: 61 EPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK 120
EPLAYVLLGIMYENGRGVPKD KKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK
Sbjct: 61 EPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK 120
Query: 121 AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY 180
AVEYFRIATEKGY NAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY
Sbjct: 121 AVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY 180
Query: 181 YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKAC 240
YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESY+YGLGVEKDKKKAEEYMQKAC
Sbjct: 181 YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYRYGLGVEKDKKKAEEYMQKAC 240
Query: 241 DFDIDKNCKKKNTSSR 256
DFDIDKNCKKKNTSSR
Sbjct: 241 DFDIDKNCKKKNTSSR 256
>ref|NP_223762.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71856 hypothetical protein jhp1045 - Helicobacter pylori (strain J99)
gb|AAD06623.1| (AE001532) putative [Helicobacter pylori J99]
Length = 256
Score = 499 bits (1286), Expect = e-141
Identities = 242/256 (94%), Positives = 248/256 (96%)
Query: 1 MGYASKLALKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNG 60
MGYASKLALKICL LCLFS LGAEHLEQK NYIYKGEEAYNNKEYERAASFYKSAIKNG
Sbjct: 1 MGYASKLALKICLVGLCLFSTLGAEHLEQKGNYIYKGEEAYNNKEYERAASFYKSAIKNG 60
Query: 61 EPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK 120
E LAY+LLGIMYENGRGVPKD KKA EYFQKAVDNDIPRGYNNLGVMYKEG+GVPKDEKK
Sbjct: 61 ESLAYILLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKK 120
Query: 121 AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY 180
AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNY KATECFRKAMHKGNVEAYILLGDIY
Sbjct: 121 AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRKAMHKGNVEAYILLGDIY 180
Query: 181 YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKAC 240
YSGNDQLGIEPDKDKA+VYYKMAAD+SSSRAYEGL+ESY+YGLGVEKDKKKAEEYMQKAC
Sbjct: 181 YSGNDQLGIEPDKDKAVVYYKMAADVSSSRAYEGLSESYRYGLGVEKDKKKAEEYMQKAC 240
Query: 241 DFDIDKNCKKKNTSSR 256
DFDIDKNCKKKNTSSR
Sbjct: 241 DFDIDKNCKKKNTSSR 256
>ref|NP_207889.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||B64657 conserved hypothetical secreted protein HP1098 - Helicobacter
pylori (strain 26695)
gb|AAD08141.1| (AE000616) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 290
Score = 120 bits (301), Expect = 1e-26
Identities = 73/238 (30%), Positives = 120/238 (49%), Gaps = 6/238 (2%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL +LCL L AE + + + G ++Y K++ +A +++ A E LG+
Sbjct: 13 LCLGALCL-GGLMAE--QDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGV 69
Query: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
+Y G+GV K+ KKAA ++ KA D + G + LG +Y G+GV ++ KA++Y+ A +
Sbjct: 70 LYYQGQGVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 129
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
Y +LG +Y +G+ V ++ KA E F KA + + +LG +Y +G G
Sbjct: 130 LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR---GTP 186
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
D KA+ Y A D+ S Y +G G K+ K+A KAC+ + C
Sbjct: 187 KDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGC 244
Score = 80.1 bits (196), Expect = 2e-14
Identities = 57/186 (30%), Positives = 84/186 (44%), Gaps = 5/186 (2%)
Query: 32 NYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQK 91
N Y G+ N +A +Y A LG +Y +G+ V +D KKA EYF K
Sbjct: 105 NLYYSGQGVSQNTN--KALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
Query: 92 AVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVP 151
A D + G LG +Y GRG PKD KKA+ + A + + N G MY G G
Sbjct: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAT 222
Query: 152 SNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRA 211
N+ +A + KA N LG + Y+G G+ ++ +AI +K + + A
Sbjct: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGE---GVTRNEKQAIENFKKGCKLGAKGA 279
Query: 212 YEGLAE 217
+ L +
Sbjct: 280 CDILKQ 285
>ref|NP_223741.1| (NC_000921) putative [Helicobacter pylori J99]
pir||C71859 hypothetical protein jhp1024 - Helicobacter pylori (strain J99)
gb|AAD06595.1| (AE001530) putative [Helicobacter pylori J99]
Length = 290
Score = 119 bits (297), Expect = 4e-26
Identities = 72/238 (30%), Positives = 119/238 (49%), Gaps = 6/238 (2%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL +LCL L AE + + + G ++Y +++ +A +++ A E LG+
Sbjct: 13 LCLGALCL-GGLMAE--QDPKELVGLGAKSYKEQDFTQAKKYFEKACDLKENSGCFNLGV 69
Query: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
+Y G GV K+ KKAA ++ KA D + G + LG +Y G+GV ++ KA++Y+ A +
Sbjct: 70 LYYQGHGVEKNLKKAASFYSKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACD 129
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
Y +LG +Y +G+ V ++ KA E F KA + + +LG +Y +G G
Sbjct: 130 LKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGR---GTP 186
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
D KA+ Y A D+ S Y +G G K+ K+A KAC+ + C
Sbjct: 187 KDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAAKNFKEALARYSKACELENGGGC 244
Score = 78.6 bits (192), Expect = 6e-14
Identities = 57/186 (30%), Positives = 83/186 (43%), Gaps = 5/186 (2%)
Query: 32 NYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQK 91
N Y G+ N +A +Y A LG +Y +G+ V +D KKA EYF K
Sbjct: 105 NLYYSGQGVSQNTN--KALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTK 162
Query: 92 AVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVP 151
A D + G LG +Y GRG PKD KKA+ + A + + N G MY G G
Sbjct: 163 ACDLNDGDGCTILGSLYDAGRGTPKDLKKALASYDKACDLKDSPGCFNAGNMYHHGEGAA 222
Query: 152 SNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRA 211
N+ +A + KA N LG + Y+G G ++ +AI +K + + A
Sbjct: 223 KNFKEALARYSKACELENGGGCFNLGAMQYNGE---GATRNEKQAIENFKKGCKLGAKGA 279
Query: 212 YEGLAE 217
+ L +
Sbjct: 280 CDILKQ 285
>ref|NP_222941.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71958 hypothetical protein jhp0220 - Helicobacter pylori (strain J99)
gb|AAD05807.1| (AE001460) putative [Helicobacter pylori J99]
Length = 355
Score = 116 bits (290), Expect = 3e-25
Identities = 77/243 (31%), Positives = 127/243 (51%), Gaps = 9/243 (3%)
Query: 9 LKICLASLCLFSALGAEHL--EQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYV 66
LKI + L F +L A HL +Q +++ GE AY + Y +AAS++K A +G
Sbjct: 6 LKILVGGL-FFLSLNA-HLWGKQDNSFLGIGERAYKSGNYSKAASYFKKACNDGVSEGCT 63
Query: 67 LLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFR 126
LGI+YENG+G D KKA EY++ A D G LG +Y EG G ++ ++A++ +
Sbjct: 64 QLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTAQNYQEAIDAYA 123
Query: 127 IATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQ 186
A + + NLGI+Y R + N +A ++K+ + + +LG Y G
Sbjct: 124 KACVLKHPESCYNLGIIY--DRKIKGNAAQAVTYYQKSCNFDMAKGCYILGTAYEKG--F 179
Query: 187 LGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG-LGVEKDKKKAEEYMQKACDFDID 245
L ++ KA++YY A ++ +A L ++ G G+++D + A +Y+QKAC +
Sbjct: 180 LEVKQSNHKAVIYYLKACRLNEGQACRALGSLFENGDAGLDEDFEVAFDYLQKACALNNS 239
Query: 246 KNC 248
C
Sbjct: 240 GGC 242
Score = 76.3 bits (186), Expect = 3e-13
Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 8/175 (4%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
+A +Y A + E A LG ++ENG G+ +D + A +Y QKA + G +LG
Sbjct: 188 KAVIYYLKACRLNEGQACRALGSLFENGDAGLDEDFEVAFDYLQKACALNNSGGCASLGS 247
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY GR V KD +KA YF+ A + G + +G MY +G V + KA + + +
Sbjct: 248 MYMLGRYVKKDPQKAFNYFKQACDMGSAVSCSRMGFMYSQGDTVSKDLRKALDNYERGCD 307
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQY 221
G+ L +YY+ DK+ AI+ Y + +A E L + Y
Sbjct: 308 MGDEVGCFALAGMYYN-------MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
Score = 75.1 bits (183), Expect = 7e-13
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+ Y+ A Y A P + LGI+Y+ R + + +A Y+QK+ + D+ +G
Sbjct: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNAAQAVTYYQKSCNFDMAKGCYI 170
Query: 104 LGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATECF 161
LG Y++G V + KAV Y+ A A LG ++ G G+ ++ A +
Sbjct: 171 LGTAYEKGFLEVKQSNHKAVIYYLKACRLNEGQACRALGSLFENGDAGLDEDFEVAFDYL 230
Query: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQY 221
+KA N LG +Y G ++ D KA Y+K A DM S+ + + Y
Sbjct: 231 QKACALNNSGGCASLGSMYMLGRY---VKKDPQKAFNYFKQACDMGSAVSCSRMGFMYSQ 287
Query: 222 GLGVEKDKKKAEEYMQKACDFDIDKNC 248
G V KD +KA + ++ CD + C
Sbjct: 288 GDTVSKDLRKALDNYERGCDMGDEVGC 314
Score = 50.4 bits (119), Expect = 2e-05
Identities = 32/111 (28%), Positives = 53/111 (46%)
Query: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
+++ +A ++++E A + + A LG MY GR V KD +KA YF++A
Sbjct: 211 LFENGDAGLDEDFEVAFDYLQKACALNNSGGCASLGSMYMLGRYVKKDPQKAFNYFKQAC 270
Query: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMY 144
D + +G MY +G V KD +KA++ + + G L MY
Sbjct: 271 DMGSAVSCSRMGFMYSQGDTVSKDLRKALDNYERGCDMGDEVGCFALAGMY 321
>ref|NP_207033.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||C64549 conserved hypothetical secreted protein HP0235 - Helicobacter
pylori (strain 26695)
gb|AAD07303.1| (AE000543) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 355
Score = 110 bits (276), Expect = 1e-23
Identities = 71/241 (29%), Positives = 121/241 (49%), Gaps = 5/241 (2%)
Query: 9 LKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLL 68
LKI + L +S +Q +++ E+AY + Y +A S++K A +G L
Sbjct: 6 LKILVCGLFFWSLNAHLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQL 65
Query: 69 GIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIA 128
GI+YENG+G D KKA EY++ A D G LG +Y EG G ++ ++A++ + A
Sbjct: 66 GIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKA 125
Query: 129 TEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLG 188
+ + NLGI+Y R + N +A ++K+ + + +LG Y G L
Sbjct: 126 CVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKG--FLE 181
Query: 189 IEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG-LGVEKDKKKAEEYMQKACDFDIDKN 247
++ KA++YY A + +A L ++ G G+++D + A +Y+QKAC +
Sbjct: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGG 241
Query: 248 C 248
C
Sbjct: 242 C 242
Score = 77.4 bits (189), Expect = 1e-13
Identities = 52/175 (29%), Positives = 83/175 (46%), Gaps = 8/175 (4%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
+A +Y A + + A LG ++ENG G+ +D + A +Y QKA + G +LG
Sbjct: 188 KAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGS 247
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY GR V KD +KA +F+ A + G + +G MY +G VP + KA + + +
Sbjct: 248 MYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQY 221
G+ L +YY+ DK+ AI+ Y + +A E L + Y
Sbjct: 308 MGDEVGCFALAGMYYN-------MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
Score = 74.7 bits (182), Expect = 9e-13
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+ Y+ A Y A P + LGI+Y+ R + + +A Y+QK+ + D+ +G
Sbjct: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYV 170
Query: 104 LGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATECF 161
LGV Y++G V + KAV Y+ A A LG ++ G G+ ++ A +
Sbjct: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
Query: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQY 221
+KA N LG +Y G ++ D KA ++K A DM S+ + + Y
Sbjct: 231 QKACGLNNSGGCASLGSMYMLGRY---VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQ 287
Query: 222 GLGVEKDKKKAEEYMQKACDFDIDKNC 248
G V KD +KA + ++ CD + C
Sbjct: 288 GDAVPKDLRKALDNYERGCDMGDEVGC 314
Score = 52.4 bits (124), Expect = 5e-06
Identities = 32/111 (28%), Positives = 54/111 (47%)
Query: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
+++ +A ++++E A + + A LG MY GR V KD +KA +F++A
Sbjct: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
Query: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMY 144
D + +G MY +G VPKD +KA++ + + G L MY
Sbjct: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
>gb|AAL47062.1|AF326614_1 (AF326614) JHP318-like protein [Helicobacter pylori]
Length = 216
Score = 107 bits (268), Expect = 1e-22
Identities = 68/213 (31%), Positives = 101/213 (46%), Gaps = 3/213 (1%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G ++ K+Y +A +++ A LG +Y++G+GV K+ KAA ++ KA D
Sbjct: 2 GVKSSEAKDYIQAKKYFEKACGLNNGGGCGALGDLYDDGKGVEKNLIKAAYFYSKACDLK 61
Query: 97 IPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
G LG +Y GR V K+ KA ++ A + NLG++Y +G GV N +K
Sbjct: 62 EGMGCKRLGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIK 121
Query: 157 ATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
A + + KA + LG +YY+G G+E D KA Y A D+ L
Sbjct: 122 AAQFYSKACELKDGLGCKDLGTLYYNGE---GVEKDLIKAAYLYSKACDLKEGLGCFNLG 178
Query: 217 ESYQYGLGVEKDKKKAEEYMQKACDFDIDKNCK 249
Y G GVEKD KA + KAC + C+
Sbjct: 179 ALYYNGKGVEKDLTKAAYFYSKACKLGSQEACE 211
Score = 68.9 bits (167), Expect = 5e-11
Identities = 45/138 (32%), Positives = 63/138 (45%), Gaps = 3/138 (2%)
Query: 116 KDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
KD +A +YF A LG +Y +G+GV N +KA + KA
Sbjct: 9 KDYIQAKKYFEKACGLNNGGGCGALGDLYDDGKGVEKNLIKAAYFYSKACDLKEGMGCKR 68
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
LG +YY G D +E + KA +Y A D+++ L YQ G GVEK+ KA ++
Sbjct: 69 LGSLYYHGRD---VEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIKAAQF 125
Query: 236 MQKACDFDIDKNCKKKNT 253
KAC+ CK T
Sbjct: 126 YSKACELKDGLGCKDLGT 143
>ref|NP_661851.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM72193.1| (AE012860) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 248
Score = 107 bits (268), Expect = 1e-22
Identities = 56/174 (32%), Positives = 97/174 (55%), Gaps = 3/174 (1%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
+++Y A + + + G A +G MY+ G GVP+D +A ++++ A D N
Sbjct: 64 DRDYAEALKWLRLSAAKGNDAAEYAIGFMYQKGLGVPQDYAEAMKWYRLAAAKDNDNAQN 123
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
+G +Y G GV D +A++++RI+ KG A N+G++Y G+GV +Y +A +R
Sbjct: 124 QIGYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDNIGVLYEHGQGVEQDYAEAMRWYR 183
Query: 163 KAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
+ KGN EA + +G+ Y G LG+E D +KA+ +Y+ AA + A + L+
Sbjct: 184 ISAAKGNGEAELNIGNFYQHG---LGVELDLNKAVKWYRSAAAKGNEEAAQKLS 234
Score = 95.9 bits (237), Expect = 4e-19
Identities = 54/173 (31%), Positives = 95/173 (54%), Gaps = 3/173 (1%)
Query: 67 LLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFR 126
L+ + Y GR V +D +A ++ + + +G MY++G GVP+D +A++++R
Sbjct: 52 LIAMKYYYGRDVDRDYAEALKWLRLSAAKGNDAAEYAIGFMYQKGLGVPQDYAEAMKWYR 111
Query: 127 IATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQ 186
+A K NA +G +Y G GV ++Y +A + +R + KGN A +G +Y G
Sbjct: 112 LAAAKDNDNAQNQIGYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDNIGVLYEHGQ-- 169
Query: 187 LGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
G+E D +A+ +Y+++A + A + YQ+GLGVE D KA ++ + A
Sbjct: 170 -GVEQDYAEAMRWYRISAAKGNGEAELNIGNFYQHGLGVELDLNKAVKWYRSA 221
Score = 77.0 bits (188), Expect = 2e-13
Identities = 43/139 (30%), Positives = 76/139 (53%), Gaps = 3/139 (2%)
Query: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSN 153
D D + + + Y GR V +D +A+++ R++ KG A +G MY +G GVP +
Sbjct: 43 DKDAAQKEYLIAMKYYYGRDVDRDYAEALKWLRLSAAKGNDAAEYAIGFMYQKGLGVPQD 102
Query: 154 YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYE 213
Y +A + +R A K N A +G +Y+ G G+E D +A+ +Y+++A + A +
Sbjct: 103 YAEAMKWYRLAAAKDNDNAQNQIGYLYHHG---WGVETDYAEAMKWYRISAAKGNFAAED 159
Query: 214 GLAESYQYGLGVEKDKKKA 232
+ Y++G GVE+D +A
Sbjct: 160 NIGVLYEHGQGVEQDYAEA 178
Score = 54.3 bits (129), Expect = 1e-06
Identities = 30/99 (30%), Positives = 50/99 (50%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
+Y A +Y+ + G A +G++YE+G+GV +D +A +++ + N+
Sbjct: 138 DYAEAMKWYRISAAKGNFAAEDNIGVLYEHGQGVEQDYAEAMRWYRISAAKGNGEAELNI 197
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIM 143
G Y+ G GV D KAV+++R A KG A L M
Sbjct: 198 GNFYQHGLGVELDLNKAVKWYRSAAAKGNEEAAQKLSAM 236
Score = 50.8 bits (120), Expect = 1e-05
Identities = 31/107 (28%), Positives = 52/107 (47%), Gaps = 3/107 (2%)
Query: 129 TEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLG 188
T+K + + Y GR V +Y +A + R + KGN A +G +Y G LG
Sbjct: 42 TDKDAAQKEYLIAMKYYYGRDVDRDYAEALKWLRLSAAKGNDAAEYAIGFMYQKG---LG 98
Query: 189 IEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
+ D +A+ +Y++AA + A + Y +G GVE D +A ++
Sbjct: 99 VPQDYAEAMKWYRLAAAKDNDNAQNQIGYLYHHGWGVETDYAEAMKW 145
>pir||T46587 hypothetical protein [imported] - Vogesella indigofera
gb|AAD54009.1|AF088857_1 (AF088857) hypothetical protein [Vogesella indigofera]
Length = 268
Score = 106 bits (265), Expect = 2e-22
Identities = 61/183 (33%), Positives = 97/183 (52%), Gaps = 3/183 (1%)
Query: 56 AIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVP 115
A + G+ A LG+ YE G GVP+D KAA ++++A +P NNL V+Y G+GV
Sbjct: 39 AAEQGDANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVN 98
Query: 116 KDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
+++ +A+ +FR A +G A +NLG M M G+G P N +A RKA +G + A
Sbjct: 99 QNDAEALAWFRKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYN 158
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
L + G G+ D A+ ++ A+ + A L Y+ G GV +D + A +
Sbjct: 159 LAIMMREGR---GLPQDDAAAVALFRKVAEQGVAIAQSNLGLMYKLGRGVAQDYQLALSW 215
Query: 236 MQK 238
++K
Sbjct: 216 LRK 218
Score = 101 bits (251), Expect = 9e-21
Identities = 63/196 (32%), Positives = 98/196 (49%), Gaps = 3/196 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+++ +AA++Y+ A G P A L ++Y NG+GV +++ +A +F+KA N
Sbjct: 63 QDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVNQNDAEALAWFRKAATQGQAEAQLN 122
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG M G+G PK++ +AV + R A +G A NL IM EGRG+P + A FRK
Sbjct: 123 LGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYNLAIMMREGRGLPQDDAAAVALFRK 182
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGL 223
+G A LG +Y G G+ D A+ + + S+ A L Y G
Sbjct: 183 VAEQGVAIAQSNLGLMYKLGR---GVAQDYQLALSWLRKGVAQKSAMAQANLGVLYLEGK 239
Query: 224 GVEKDKKKAEEYMQKA 239
GV +D +A + + A
Sbjct: 240 GVAQDDNEAVVWFRLA 255
Score = 100 bits (250), Expect = 1e-20
Identities = 60/171 (35%), Positives = 93/171 (54%), Gaps = 4/171 (2%)
Query: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
+Y + N + E A F K+A + G+ A + LG M NG+G PK++ +A + +KA
Sbjct: 90 LYLNGQGVNQNDAEALAWFRKAATQ-GQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAA 148
Query: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSN 153
NL +M +EGRG+P+D+ AV FR E+G A NLG+MY GRGV +
Sbjct: 149 AQGQLMADYNLAIMMREGRGLPQDDAAAVALFRKVAEQGVAIAQSNLGLMYKLGRGVAQD 208
Query: 154 YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAA 204
Y A RK + + + A LG +Y G G+ D ++A+V++++AA
Sbjct: 209 YQLALSWLRKGVAQKSAMAQANLGVLYLEGK---GVAQDDNEAVVWFRLAA 256
Score = 60.1 bits (144), Expect = 2e-08
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 126 RIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGND 185
++A E+G NA LG+ Y +G GVP ++ KA +R+A +G EA L +Y +G
Sbjct: 37 QVAAEQGDANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQ- 95
Query: 186 QLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
G+ + +A+ +++ AA + A L G G K+ +A + +KA
Sbjct: 96 --GVNQNDAEALAWFRKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKA 147
>gb|AAB63298.1| (AF008565) Orf2 [Helicobacter pylori]
Length = 250
Score = 106 bits (264), Expect = 3e-22
Identities = 68/238 (28%), Positives = 113/238 (46%), Gaps = 10/238 (4%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL +LCL + ++ N G E+ +++ +A + ++ A + V LG
Sbjct: 13 LCLGALCLRGLMAEPDAKELVNL---GIESAKKQDFAQAKTHFEKACELKNGFGCVFLGA 69
Query: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
YE G+GV KD KKA +++ K+ + + G N LG +Y G+GV KD KKA +Y+ A +
Sbjct: 70 FYEEGKGVGKDLKKAIQFYTKSCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACD 129
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
+ + LG ++ G G P + KA + + KA + I G IY +
Sbjct: 130 LNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIY-------SVT 182
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
+ +AIV Y A +++ R L G KD+K+A E +K C + + C
Sbjct: 183 KNFKEAIVRYSQACELNDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSGVKEAC 240
>gb|AAC24210.1| (AF053708) cysteine-rich protein; HcpA [Helicobacter pylori]
Length = 250
Score = 106 bits (264), Expect = 3e-22
Identities = 68/238 (28%), Positives = 113/238 (46%), Gaps = 10/238 (4%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL +LCL + ++ N G E+ +++ +A + ++ A + V LG
Sbjct: 13 LCLGALCLRGLMAEPDAKELVNL---GIESAKKQDFAQAKTHFEKACELKNGFGCVFLGA 69
Query: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
YE G+GV KD KKA +++ K+ + + G N LG +Y G+GV KD KKA +Y+ A +
Sbjct: 70 FYEEGKGVGKDLKKAIQFYTKSCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACD 129
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
+ + LG ++ G G P + KA + + KA + I G IY +
Sbjct: 130 LNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIY-------SVT 182
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
+ +AIV Y A +++ R L G KD+K+A E +K C + + C
Sbjct: 183 KNFKEAIVRYSQACELNDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSGVKEAC 240
>ref|NP_222918.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZMM1|HCPA_HELPJ HcpA protein precursor (Cysteine-rich 28 kDa protein)
pir||B71961 hypothetical protein jhp0197 - Helicobacter pylori (strain J99)
gb|AAD05781.1| (AE001458) putative [Helicobacter pylori J99]
Length = 250
Score = 105 bits (262), Expect = 5e-22
Identities = 70/238 (29%), Positives = 112/238 (46%), Gaps = 10/238 (4%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL +LCL L AE + + G E+ +++ +A + ++ A + E V LG
Sbjct: 13 LCLGALCL-RGLMAE--PDAKELVSLGIESVKKQDFAQAKAHFEKACELKEGFGCVFLGA 69
Query: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
YE G+GV KD KKA +++ K + + G LG +Y G+GV KD KKA +Y+ + E
Sbjct: 70 FYEEGKGVGKDLKKAIQFYTKGCELNDGYGCRLLGNLYYNGQGVSKDAKKASQYYSKSCE 129
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
+ LG ++ G G P + KA + + KA + I G +Y G+
Sbjct: 130 LNHAEGCTVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYMY-------GVA 182
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
+ +AIV Y A ++ R L G KD+K+A E +K C + + C
Sbjct: 183 KNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC 240
>ref|NP_207009.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
sp|O25001|HCPA_HELPY HcpA protein precursor (Cysteine-rich 28 kDa protein)
pir||C64546 conserved hypothetical secreted protein HP0211 - Helicobacter
pylori (strain 26695)
gb|AAD07279.1| (AE000541) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 250
Score = 105 bits (262), Expect = 5e-22
Identities = 68/238 (28%), Positives = 111/238 (46%), Gaps = 10/238 (4%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL +LCL + ++ N G E+ +++ +A + ++ A + V LG
Sbjct: 13 LCLGTLCLRGLMAEPDAKELVNL---GIESAKKQDFAQAKTHFEKACELKNGFGCVFLGA 69
Query: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
YE G+GV KD KKA +++ K + + G N LG +Y G+GV KD KKA +Y+ A +
Sbjct: 70 FYEEGKGVGKDLKKAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACD 129
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
+ + LG ++ G G P + KA + + KA + I G IY +
Sbjct: 130 LNHAEGCMVLGSLHHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIY-------SVT 182
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
+ +AIV Y A ++ R L G KD+K+A E +K C + + C
Sbjct: 183 KNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEAC 240
>ref|NP_586349.1| (NC_003237) similarity to SKT5 PROTEIN [Encephalitozoon cuniculi]
emb|CAD25953.1| (AL590450) similarity to SKT5 PROTEIN [Encephalitozoon cuniculi]
Length = 590
Score = 104 bits (259), Expect = 1e-21
Identities = 66/192 (34%), Positives = 96/192 (49%), Gaps = 3/192 (1%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVM 107
R + A K+G A LG+ Y+ G GVP D A +Y+ + LG
Sbjct: 119 RGVEWLVYANKHGNLYARYCLGVCYQEGYGVPVDPLLAVKYYSEGAYEGNTCSIGILGYC 178
Query: 108 YKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHK 167
+ +G GV ++E+ AVE F+ A+EK + A N+G Y EGRGV N +KA E +R +
Sbjct: 179 FLKGFGVERNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYRLSAKM 238
Query: 168 GNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEK 227
N A LG+ Y G G++ D KA YK +A LA YQ G+G E+
Sbjct: 239 ENSYAQNALGNCYEEGK---GVDRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGTER 295
Query: 228 DKKKAEEYMQKA 239
+ +KA E+ ++A
Sbjct: 296 NLEKAFEWYKRA 307
Score = 99.8 bits (247), Expect = 3e-20
Identities = 62/200 (31%), Positives = 98/200 (49%), Gaps = 3/200 (1%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E A +K A + + A +G YE GRGV ++ KA E ++ + + N LG
Sbjct: 190 EIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYRLSAKMENSYAQNALGN 249
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
Y+EG+GV +D +KA E ++ + +GY + NL Y +G G N KA E +++A
Sbjct: 250 CYEEGKGVDRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGTERNLEKAFEWYKRAAI 309
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVE 226
+G A +G Y +G LG P A+ +YK +A + + L YQ+G GV
Sbjct: 310 QGLSRAKHNIGYCYQNG---LGTSPCMRSAVNWYKESAAEDNKYSIHALGVCYQHGYGVP 366
Query: 227 KDKKKAEEYMQKACDFDIDK 246
KD++ A Y + D+
Sbjct: 367 KDERLAVRYFSEGVRAGFDE 386
Score = 90.9 bits (224), Expect = 1e-17
Identities = 56/191 (29%), Positives = 90/191 (46%), Gaps = 3/191 (1%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
A ++YK + + LG+ Y++G GVPKDE+ A YF + V +L + Y
Sbjct: 336 AVNWYKESAAEDNKYSIHALGVCYQHGYGVPKDERLAVRYFSEGVRAGFDEAIISLALCY 395
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
+ G GV +K+ + A E ++A LG Y EG G P N KA + + + +
Sbjct: 396 RSGIGVRISPEKSFALMKRAAEMNNSSAQNTLGYYYEEGYGTPKNLRKAVKWYETSAKRN 455
Query: 169 NVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD 228
N A L +Y +GN + DK+ I + D+ + RA L ++ G+ V KD
Sbjct: 456 NSWALFNLSTLYLNGNH---VPADKELGIRLLIRSRDLGNPRAMNTLGYCFEKGIVVGKD 512
Query: 229 KKKAEEYMQKA 239
+ A E+ +A
Sbjct: 513 PRLAFEHYTQA 523
Score = 89.7 bits (221), Expect = 3e-17
Identities = 53/195 (27%), Positives = 95/195 (48%), Gaps = 3/195 (1%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
+++ ++A YK + G P L Y+ G G ++ +KA E++++A + R +
Sbjct: 258 DRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGTERNLEKAFEWYKRAAIQGLSRAKH 317
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
N+G Y+ G G + AV +++ + + + LG+ Y G GVP + A F
Sbjct: 318 NIGYCYQNGLGTSPCMRSAVNWYKESAAEDNKYSIHALGVCYQHGYGVPKDERLAVRYFS 377
Query: 163 KAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG 222
+ + G EA I L Y SG +G+ +K+ K AA+M++S A L Y+ G
Sbjct: 378 EGVRAGFDEAIISLALCYRSG---IGVRISPEKSFALMKRAAEMNNSSAQNTLGYYYEEG 434
Query: 223 LGVEKDKKKAEEYMQ 237
G K+ +KA ++ +
Sbjct: 435 YGTPKNLRKAVKWYE 449
Score = 87.8 bits (216), Expect = 1e-16
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 3/187 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+ E+A +YK A G A +G Y+NG G + A +++++ D +
Sbjct: 295 RNLEKAFEWYKRAAIQGLSRAKHNIGYCYQNGLGTSPCMRSAVNWYKESAAEDNKYSIHA 354
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LGV Y+ G GVPKDE+ AV YF G+ A I+L + Y G GV + K+ ++
Sbjct: 355 LGVCYQHGYGVPKDERLAVRYFSEGVRAGFDEAIISLALCYRSGIGVRISPEKSFALMKR 414
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGL 223
A N A LG Y G G + KA+ +Y+ +A ++S A L+ Y G
Sbjct: 415 AAEMNNSSAQNTLGYYYEEG---YGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGN 471
Query: 224 GVEKDKK 230
V DK+
Sbjct: 472 HVPADKE 478
Score = 83.6 bits (205), Expect = 2e-15
Identities = 53/196 (27%), Positives = 90/196 (45%), Gaps = 3/196 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K+ A ++ ++ G A + L + Y +G GV +K+ ++A + + N
Sbjct: 367 KDERLAVRYFSEGVRAGFDEAIISLALCYRSGIGVRISPEKSFALMKRAAEMNNSSAQNT 426
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG Y+EG G PK+ +KAV+++ + ++ + A NL +Y+ G VP++ +
Sbjct: 427 LGYYYEEGYGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNHVPADKELGIRLLIR 486
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGL 223
+ GN A LG + G + + D A +Y A S+A L Y+ G+
Sbjct: 487 SRDLGNPRAMNTLGYCFEKG---IVVGKDPRLAFEHYTQALMNGYSKAGYSLGRCYESGI 543
Query: 224 GVEKDKKKAEEYMQKA 239
G E D KA Y KA
Sbjct: 544 GTEVDLDKALYYFYKA 559
Score = 65.5 bits (158), Expect = 5e-10
Identities = 43/135 (31%), Positives = 62/135 (45%), Gaps = 1/135 (0%)
Query: 35 YKGEEAYNN-KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
Y EE Y K +A +Y+++ K A L +Y NG VP D++ ++
Sbjct: 429 YYYEEGYGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNHVPADKELGIRLLIRSR 488
Query: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSN 153
D PR N LG +++G V KD + A E++ A GY+ A +LG Y G G +
Sbjct: 489 DLGNPRAMNTLGYCFEKGIVVGKDPRLAFEHYTQALMNGYSKAGYSLGRCYESGIGTEVD 548
Query: 154 YVKATECFRKAMHKG 168
KA F KA G
Sbjct: 549 LDKALYYFYKASSAG 563
Score = 61.2 bits (147), Expect = 1e-08
Identities = 48/178 (26%), Positives = 80/178 (43%), Gaps = 18/178 (10%)
Query: 72 YENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK----------- 120
YE G G D KKA + KA +D L + + GR +++
Sbjct: 56 YEFGIGTSVDMKKAEMRYTKAALSDNGLALIRLAFIRRFGRPTATIDRREAKRYLDKLKR 115
Query: 121 ----AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILL 176
VE+ A + G A LG+ Y EG GVP + + A + + + ++GN + +L
Sbjct: 116 LGRRGVEWLVYANKHGNLYARYCLGVCYQEGYGVPVDPLLAVKYYSEGAYEGNTCSIGIL 175
Query: 177 GDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEE 234
G + G G+E +++ A+ +K A++ S A + Y+ G GVE++ KA E
Sbjct: 176 GYCFLKG---FGVERNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFE 230
>ref|NP_223037.1| (NC_000921) putative [Helicobacter pylori J99]
pir||F71945 hypothetical protein jhp0318 - Helicobacter pylori (strain J99)
gb|AAD05894.1| (AE001468) putative [Helicobacter pylori J99]
Length = 251
Score = 104 bits (259), Expect = 1e-21
Identities = 74/206 (35%), Positives = 97/206 (46%), Gaps = 4/206 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K +AA Y A + E L L +Y GRGV K+ KAA+Y KA D + G N
Sbjct: 45 KNLIKAAQPYTKACELKEGLGCERLWSLYYYGRGVEKNLIKAAQYASKACDLNNGVGCKN 104
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG +Y+ G GV KD KA +Y A + + LG +Y G+GV N KA + K
Sbjct: 105 LGFLYEYGEGVEKDLIKAAQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTKAAYFYSK 164
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGL 223
A LG +Y N Q G+E D K Y A ++ S LA Y G
Sbjct: 165 ACDLNEGLGCFNLGGLY---NGQ-GVEKDLTKVAYLYSKACELKESFGCGALAVLYINGQ 220
Query: 224 GVEKDKKKAEEYMQKACDFDIDKNCK 249
GVEKD KA++Y+ KAC + C+
Sbjct: 221 GVEKDLTKADQYISKACKLGDQEACE 246
Score = 90.1 bits (222), Expect = 2e-17
Identities = 65/212 (30%), Positives = 97/212 (45%), Gaps = 4/212 (1%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G ++ K++ +A +++ A LG +Y++G+GV K+ KAA+ + KA +
Sbjct: 2 GVKSNKAKDFIQAKKYFEKACNLNYGGGCGALGDLYDDGKGVEKNLIKAAQPYTKACELK 61
Query: 97 IPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
G L +Y GRGV K+ KA +Y A + NLG +Y G GV + +K
Sbjct: 62 EGLGCERLWSLYYYGRGVEKNLIKAAQYASKACDLNNGVGCKNLGFLYEYGEGVEKDLIK 121
Query: 157 ATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
A + KA N +LG +Y SG G+E + KA +Y A D++ L
Sbjct: 122 AAQYASKACDLNNGSGCDVLGFLYGSGK---GVEKNLTKAAYFYSKACDLNEGLGCFNLG 178
Query: 217 ESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
Y G GVEKD K KAC+ C
Sbjct: 179 GLYN-GQGVEKDLTKVAYLYSKACELKESFGC 209
Score = 55.1 bits (131), Expect = 7e-07
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 7/105 (6%)
Query: 149 GVPSN----YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAA 204
GV SN +++A + F KA + LGD+Y G G+E + KA Y A
Sbjct: 2 GVKSNKAKDFIQAKKYFEKACNLNYGGGCGALGDLYDDGK---GVEKNLIKAAQPYTKAC 58
Query: 205 DMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNCK 249
++ E L Y YG GVEK+ KA +Y KACD + CK
Sbjct: 59 ELKEGLGCERLWSLYYYGRGVEKNLIKAAQYASKACDLNNGVGCK 103
>ref|NP_415177.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
pir||B64799 hypothetical protein b0644 - Escherichia coli
gb|AAB40845.1| (U82598) hypothetical protein [Escherichia coli]
gb|AAC73745.1| (AE000169) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35291.1| (D90704) Sel-1 protein [Escherichia coli]
Length = 327
Score = 101 bits (252), Expect = 7e-21
Identities = 65/204 (31%), Positives = 105/204 (50%), Gaps = 5/204 (2%)
Query: 38 EEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDI 97
E+ +K+ E+A + K A G A LG + RG + K+A ++Q A ++ +
Sbjct: 76 EDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLD--RGEAPNYKEAVVWYQIAAESGM 133
Query: 98 PRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
NNLG MY+ G GV KD A +++ A +G+++A NL +Y +G+GV N A
Sbjct: 134 SYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLA 193
Query: 158 TECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAE 217
+ K+ +GN A + Y +G G++ D +A+ +Y AA S AY +
Sbjct: 194 AFWYLKSAQQGNRHAQFQIAWDYNAGE---GVDQDYKQAMYWYLKAAAQGSVGAYVNIGY 250
Query: 218 SYQYGLGVEKDKKKAEEYMQKACD 241
Y++G GVEKD + A E+ KA +
Sbjct: 251 MYKHGQGVEKDYQAAFEWFTKAAE 274
Score = 97.1 bits (240), Expect = 2e-19
Identities = 59/193 (30%), Positives = 101/193 (51%), Gaps = 3/193 (1%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y+ A +Y+ A ++G A LG MY NG GV KD A ++++A NNL
Sbjct: 118 YKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLA 177
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAM 165
+Y++G+GV +++ A ++ + ++G +A + Y G GV +Y +A + KA
Sbjct: 178 DLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAA 237
Query: 166 HKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGV 225
+G+V AY+ +G +Y G G+E D A ++ AA+ + + A+ LA Y YG G
Sbjct: 238 AQGSVGAYVNIGYMYKHGQ---GVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGR 294
Query: 226 EKDKKKAEEYMQK 238
D ++A + +K
Sbjct: 295 PVDLRQALDLYRK 307
Score = 78.2 bits (191), Expect = 8e-14
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 23 GAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDE 82
G + + ++Y+ K+Y A +YK A G A L +YE+G+GV +++
Sbjct: 132 GMSYAQNNLGWMYRNGNGVA-KDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNK 190
Query: 83 KKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGI 142
AA ++ K+ + Y G GV +D K+A+ ++ A +G AY+N+G
Sbjct: 191 TLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGY 250
Query: 143 MYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSG 183
MY G+GV +Y A E F KA + A+ L +Y+ G
Sbjct: 251 MYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYG 291
Score = 73.9 bits (180), Expect = 2e-12
Identities = 43/120 (35%), Positives = 60/120 (49%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
AA +Y + + G A + Y G GV +D K+A ++ KA Y N+G MY
Sbjct: 193 AAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMY 252
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
K G+GV KD + A E+F A E A+ NL IMY G G P + +A + +RK G
Sbjct: 253 KHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSG 312
Score = 65.5 bits (158), Expect = 5e-10
Identities = 36/110 (32%), Positives = 60/110 (53%), Gaps = 1/110 (0%)
Query: 23 GAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDE 82
G H + + + Y E + ++Y++A +Y A G AYV +G MY++G+GV KD
Sbjct: 204 GNRHAQFQIAWDYNAGEGVD-QDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDY 262
Query: 83 KKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKG 132
+ A E+F KA + + + NL +MY G G P D ++A++ +R G
Sbjct: 263 QAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSG 312
Score = 51.6 bits (122), Expect = 8e-06
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPK-DEKKAVEYFRIATEKGYTNAYIN 139
D E ++A D Y +G Y + D++KA + ++A E+G+ A +
Sbjct: 11 DNLSIDEIIERAEKGDCEAQYI-VGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 69
Query: 140 LGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
LG Y E + + +A +KA +G+ A LG G P+ +A+V+
Sbjct: 70 LGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLDRGE-----APNYKEAVVW 124
Query: 200 YKMAADMSSSRAYEGLAESYQYGLGVEKD 228
Y++AA+ S A L Y+ G GV KD
Sbjct: 125 YQIAAESGMSYAQNNLGWMYRNGNGVAKD 153
>sp|P77234|YBEQ_ECOLI Hypothetical protein ybeQ
Length = 325
Score = 101 bits (252), Expect = 7e-21
Identities = 65/204 (31%), Positives = 105/204 (50%), Gaps = 5/204 (2%)
Query: 38 EEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDI 97
E+ +K+ E+A + K A G A LG + RG + K+A ++Q A ++ +
Sbjct: 74 EDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLD--RGEAPNYKEAVVWYQIAAESGM 131
Query: 98 PRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
NNLG MY+ G GV KD A +++ A +G+++A NL +Y +G+GV N A
Sbjct: 132 SYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLA 191
Query: 158 TECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAE 217
+ K+ +GN A + Y +G G++ D +A+ +Y AA S AY +
Sbjct: 192 AFWYLKSAQQGNRHAQFQIAWDYNAGE---GVDQDYKQAMYWYLKAAAQGSVGAYVNIGY 248
Query: 218 SYQYGLGVEKDKKKAEEYMQKACD 241
Y++G GVEKD + A E+ KA +
Sbjct: 249 MYKHGQGVEKDYQAAFEWFTKAAE 272
Score = 97.1 bits (240), Expect = 2e-19
Identities = 59/193 (30%), Positives = 101/193 (51%), Gaps = 3/193 (1%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y+ A +Y+ A ++G A LG MY NG GV KD A ++++A NNL
Sbjct: 116 YKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLA 175
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAM 165
+Y++G+GV +++ A ++ + ++G +A + Y G GV +Y +A + KA
Sbjct: 176 DLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAA 235
Query: 166 HKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGV 225
+G+V AY+ +G +Y G G+E D A ++ AA+ + + A+ LA Y YG G
Sbjct: 236 AQGSVGAYVNIGYMYKHGQ---GVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGR 292
Query: 226 EKDKKKAEEYMQK 238
D ++A + +K
Sbjct: 293 PVDLRQALDLYRK 305
Score = 78.2 bits (191), Expect = 8e-14
Identities = 47/161 (29%), Positives = 78/161 (48%), Gaps = 1/161 (0%)
Query: 23 GAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDE 82
G + + ++Y+ K+Y A +YK A G A L +YE+G+GV +++
Sbjct: 130 GMSYAQNNLGWMYRNGNGVA-KDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNK 188
Query: 83 KKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGI 142
AA ++ K+ + Y G GV +D K+A+ ++ A +G AY+N+G
Sbjct: 189 TLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGY 248
Query: 143 MYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSG 183
MY G+GV +Y A E F KA + A+ L +Y+ G
Sbjct: 249 MYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYG 289
Score = 73.9 bits (180), Expect = 2e-12
Identities = 43/120 (35%), Positives = 60/120 (49%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
AA +Y + + G A + Y G GV +D K+A ++ KA Y N+G MY
Sbjct: 191 AAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMY 250
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
K G+GV KD + A E+F A E A+ NL IMY G G P + +A + +RK G
Sbjct: 251 KHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSG 310
Score = 65.5 bits (158), Expect = 5e-10
Identities = 36/110 (32%), Positives = 60/110 (53%), Gaps = 1/110 (0%)
Query: 23 GAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDE 82
G H + + + Y E + ++Y++A +Y A G AYV +G MY++G+GV KD
Sbjct: 202 GNRHAQFQIAWDYNAGEGVD-QDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDY 260
Query: 83 KKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKG 132
+ A E+F KA + + + NL +MY G G P D ++A++ +R G
Sbjct: 261 QAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSG 310
Score = 51.6 bits (122), Expect = 8e-06
Identities = 41/149 (27%), Positives = 67/149 (44%), Gaps = 7/149 (4%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPK-DEKKAVEYFRIATEKGYTNAYIN 139
D E ++A D Y +G Y + D++KA + ++A E+G+ A +
Sbjct: 9 DNLSIDEIIERAEKGDCEAQYI-VGFYYNRDSAIDSPDDEKAFYWLKLAAEQGHCEAQYS 67
Query: 140 LGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
LG Y E + + +A +KA +G+ A LG G P+ +A+V+
Sbjct: 68 LGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALGWTLDRGE-----APNYKEAVVW 122
Query: 200 YKMAADMSSSRAYEGLAESYQYGLGVEKD 228
Y++AA+ S A L Y+ G GV KD
Sbjct: 123 YQIAAESGMSYAQNNLGWMYRNGNGVAKD 151
>ref|NP_564049.1| (NM_101684) expressed protein [Arabidopsis thaliana]
gb|AAF78381.1|AC069551_14 (AC069551) T10O22.22 [Arabidopsis thaliana]
Length = 678
Score = 101 bits (251), Expect = 9e-21
Identities = 59/180 (32%), Positives = 99/180 (54%), Gaps = 5/180 (2%)
Query: 58 KNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPK 116
+ G A +G+ Y G RG+ +D KA +F KAVD PR LG +Y G GV +
Sbjct: 238 QKGNANAMYKIGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVER 297
Query: 117 DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGV-PSNYVKATECFRKAMHKGNVEAYIL 175
+ KA+E+ +A ++G +A+ +G +Y++G GV NY KA E F KA+ + +
Sbjct: 298 NYTKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYN 357
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
LG +Y G +G+ D +A Y+ +AA+ +A+ LA+ + G+G++K+ + A +
Sbjct: 358 LGVLYLKG---IGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSF 414
Score = 91.3 bits (225), Expect = 9e-18
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 45/237 (18%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDE-KKAAEYFQKAVDNDIPRGYN 102
+ Y +A + A K G A+ +G +Y G GV K KA EYF+KAVDN+ P G+
Sbjct: 297 RNYTKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHY 356
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
NLGV+Y +G GV +D ++A +YF +A G A+ L M+ G G+ N AT ++
Sbjct: 357 NLGVLYLKGIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYK 416
Query: 163 KAMHKG--------NVEAYILLGD-----IYYSGNDQLGIE------------------- 190
+G +EAY L GD I YS ++G E
Sbjct: 417 LVAERGPWSSLSRWALEAY-LKGDVGKALILYSRMAEMGYEVAQSNAAWILDKYGERSMC 475
Query: 191 -------PDK---DKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD-KKKAEEYM 236
DK ++A + A++ + A + ++Y YG G E+D + AE YM
Sbjct: 476 MGVSGFCTDKERHERAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAYM 532
Score = 89.7 bits (221), Expect = 3e-17
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 4/163 (2%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+++ +A ++ A+ GEP + LLG +Y G GV ++ KA E+ A + +N
Sbjct: 261 RDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTLAAKEGLYSAFNG 320
Query: 104 LGVMYKEGRGV-PKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
+G +Y +G GV K+ KA EYF A + + + NLG++Y++G GV + +AT+ F
Sbjct: 321 IGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFF 380
Query: 163 KAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
A + G +A+ L ++++G +G++ + + A +YK+ A+
Sbjct: 381 VAANAGQPKAFYQLAKMFHTG---VGLKKNLEMATSFYKLVAE 420
Score = 77.8 bits (190), Expect = 1e-13
Identities = 58/255 (22%), Positives = 108/255 (41%), Gaps = 47/255 (18%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y+Y + K Y +A +++ A+ N +P + LG++Y G GV +D ++A +YF A
Sbjct: 323 YLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFFVA 382
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGI-MYMEG---- 147
+ P+ + L M+ G G+ K+ + A ++++ E+G ++ + Y++G
Sbjct: 383 ANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVAERGPWSSLSRWALEAYLKGDVGK 442
Query: 148 ---------------------------------RGV------PSNYVKATECFRKAMHKG 168
GV + +A + +A +G
Sbjct: 443 ALILYSRMAEMGYEVAQSNAAWILDKYGERSMCMGVSGFCTDKERHERAHSLWWRASEQG 502
Query: 169 NVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD 228
N A +L+GD YY G G E D +A Y A S+++A L +++G G+ D
Sbjct: 503 NEHAALLIGDAYYYGR---GTERDFVRAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFD 559
Query: 229 KKKAEEYMQKACDFD 243
A+ Y ++ D
Sbjct: 560 LHLAKRYYDESLQSD 574
Score = 49.7 bits (117), Expect = 3e-05
Identities = 53/213 (24%), Positives = 86/213 (39%), Gaps = 22/213 (10%)
Query: 42 NNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGY 101
N + E A ++A G+P A ++G +Y G G+ +++ K+ + N G
Sbjct: 104 NFRLMEEAVDEIEAASSAGDPHAQSIMGFVY--GIGMMREKSKSKSFLHH---NFAAAGG 158
Query: 102 NNLGVMYKEGRGVPKD-EKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
N M + +D KAV+ + E + I+ +E + S +
Sbjct: 159 NMQSKMALAFTYLRQDMHDKAVQLYAELAETAVNSFLISKDSPVVEPTRIHSGTEENKGA 218
Query: 161 FRKAM--------------HKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADM 206
RK+ KGN A +G YY G G+ D KA+ ++ A D
Sbjct: 219 LRKSRGEEDEDFQILEYQAQKGNANAMYKIGLFYYFG--LRGLRRDHTKALHWFLKAVDK 276
Query: 207 SSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
R+ E L E Y G GVE++ KA E++ A
Sbjct: 277 GEPRSMELLGEIYARGAGVERNYTKALEWLTLA 309
>ref|NP_460716.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL20675.1| (AE008778) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 509
Score = 100 bits (250), Expect = 1e-20
Identities = 52/161 (32%), Positives = 88/161 (54%), Gaps = 2/161 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K++ A +Y+ A G A +G+M+ G GV +D ++A +++KA +P +
Sbjct: 294 KDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTH 353
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG+M GRGV + +++A+ ++R A ++ + A LG+ Y GRGVP N A + + K
Sbjct: 354 LGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLK 413
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAA 204
A +G A LG+IY G G+ D +A ++Y MA+
Sbjct: 414 AAEQGFTPAQSALGEIYAHGRQ--GVPKDNKQAYIWYYMAS 452
Score = 88.2 bits (217), Expect = 8e-17
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
Query: 69 GIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIA 128
G+ Y NG + KD A E++++A + + +GVM+ +G GV +D ++A+ ++R A
Sbjct: 283 GVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKA 342
Query: 129 TEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLG 188
+G A +LGIM GRGV + +A +RKA + +A LG Y +G G
Sbjct: 343 ARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGR---G 399
Query: 189 IEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG-LGVEKDKKKA 232
+ + A+ +Y AA+ + A L E Y +G GV KD K+A
Sbjct: 400 VPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQA 444
Score = 85.9 bits (211), Expect = 4e-16
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
+++Y++A ++Y+ A + G P A LGIM GRGV + +++A +++KA D +
Sbjct: 329 SQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQY 388
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR-GVPSNYVKA 157
LGV Y GRGVP++ + A++++ A E+G+T A LG +Y GR GVP + +A
Sbjct: 389 QLGVAYSTGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQA 444
Score = 83.6 bits (205), Expect = 2e-15
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 37/232 (15%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGY-- 101
++Y++ A + A +N A + LG+ Y G GVP+D ++A + + + G+
Sbjct: 188 QDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIP 247
Query: 102 --------------------------------NNLGVMYKEGRGVPKDEKKAVEYFRIAT 129
N GV Y G + KD A+E++R A
Sbjct: 248 LNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHNLALEWYRRAA 307
Query: 130 EKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
+G A +G+M+M+G GV +Y +A +RKA +G A LG + G G+
Sbjct: 308 AQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGR---GV 364
Query: 190 EPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
+AI +Y+ AA ++A L +Y G GV ++ + A ++ KA +
Sbjct: 365 AQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAE 416
Score = 79.3 bits (194), Expect = 4e-14
Identities = 51/172 (29%), Positives = 86/172 (49%), Gaps = 5/172 (2%)
Query: 68 LGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRI 127
LG+MY +G+GVP+D ++ A +KA +N LGV Y G GVP+D ++AV +
Sbjct: 176 LGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Query: 128 ATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL 187
YT +I L +Y + P++ V + +RK + + G YY+G L
Sbjct: 236 GIPGSYTPGHIPLNALY--DKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLL 293
Query: 188 GIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
D + A+ +Y+ AA + A + + + G GV +D ++A + +KA
Sbjct: 294 ---KDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKA 342
Score = 74.7 bits (182), Expect = 9e-13
Identities = 64/220 (29%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 30 KRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYF 89
+ Y EE +E E+ A + G+ A LG Y GR V D K A ++
Sbjct: 26 EERYPADSEECQYVQELEQKA-------EQGDESAQFSLGSWYAEGRYVKPDYKLAIKWL 78
Query: 90 QKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRG 149
+KA Y LG Y G P +KA+E++R A E G ++ LG YM G G
Sbjct: 79 EKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDG 138
Query: 150 VPSNYVKATECFRKAMHKGN-----------VEAYILLGDIYYSGNDQLGIEPDKDKAIV 198
P N A E +RKA N A LG +Y G G+ D + +
Sbjct: 139 FPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQ---GVPQDYQQTAI 195
Query: 199 YYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQK 238
+ AA+ A L +Y YG GV +D ++A ++ +
Sbjct: 196 LMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 59.7 bits (143), Expect = 3e-08
Identities = 38/123 (30%), Positives = 64/123 (51%), Gaps = 3/123 (2%)
Query: 117 DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILL 176
+E + V+ E+G +A +LG Y EGR V +Y A + KA +G+ +Y +L
Sbjct: 34 EECQYVQELEQKAEQGDESAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFIL 93
Query: 177 GDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYM 236
G Y G + + KA+ +Y+ AA++ S E L ++Y YG G ++ + A E+
Sbjct: 94 GYHYNYGEN---FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWY 150
Query: 237 QKA 239
+KA
Sbjct: 151 RKA 153
>gb|AAD05210.1| (AF063095) SELlL [Mus musculus]
gb|AAH26816.1| (BC026816) Sel1 (suppressor of lin-12) 1 homolog (C. elegans) [Mus
musculus]
Length = 740
Score = 100 bits (249), Expect = 2e-20
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 5/197 (2%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
E +Y+ + G+ A V LG ++ GRGV ++ ++A +YF A + LG
Sbjct: 304 EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLG 363
Query: 106 VMYKEGRG-VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
MY EG VP+ + A+ YF+ A + G LG+ Y+ GRGV NY A + F+KA
Sbjct: 364 KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKA 423
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G V+ + LG +YY+G +G++ D +A+ Y+ +A+ A+ LA+ + G G
Sbjct: 424 AEQGWVDGQLQLGSMYYNG---IGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTG 480
Query: 225 VEKDKKKAEEYMQKACD 241
V + A E + C+
Sbjct: 481 VMRSCHTAVELFKNVCE 497
Score = 87.0 bits (214), Expect = 2e-16
Identities = 49/141 (34%), Positives = 75/141 (52%), Gaps = 1/141 (0%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRG-VPKDEKKAAEYFQKAVDNDIPRGYN 102
+ ++RA ++ A G A LG MY G VP+ + A YF+KA D P G +
Sbjct: 338 QNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQS 397
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
LG+ Y GRGV + A++YF+ A E+G+ + + LG MY G GV +Y +A + F
Sbjct: 398 GLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFN 457
Query: 163 KAMHKGNVEAYILLGDIYYSG 183
A G++ A+ L ++ SG
Sbjct: 458 LASQGGHILAFYNLAQMHASG 478
Score = 86.7 bits (213), Expect = 2e-16
Identities = 59/211 (27%), Positives = 100/211 (46%), Gaps = 15/211 (7%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
N +A +Y G +A+++LG Y G GV + + A ++ + V N + +
Sbjct: 218 NSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHY-RLVANHVASDIS 276
Query: 103 NLGVMYKEGRGVPKD-----------EKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGV 150
G + +P + E+ ++Y++ EKG A + LG +++ G RGV
Sbjct: 277 LTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGV 336
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSR 210
N+ +A + F A + GN A LG +Y G+D + + A+ Y+K AADM +
Sbjct: 337 EQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDI--VPQSNETALHYFKKAADMGNPV 394
Query: 211 AYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
GL +Y YG GV+ + A +Y QKA +
Sbjct: 395 GQSGLGMAYLYGRGVQVNYDLALKYFQKAAE 425
Score = 84.3 bits (207), Expect = 1e-15
Identities = 55/170 (32%), Positives = 82/170 (47%), Gaps = 7/170 (4%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E A ++K A G P+ LG+ Y GRGV + A +YFQKA + G LG
Sbjct: 378 ETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGS 437
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY G GV +D K+A++YF +A++ G+ A+ NL M+ G GV + A E F+
Sbjct: 438 MYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 497
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
+G ++ Y S D+ D + A+V Y + A+ A A
Sbjct: 498 RGRWSERLMTA--YNSYKDE-----DYNAAVVQYLLLAEQGYEVAQSNAA 540
Score = 72.0 bits (175), Expect = 6e-12
Identities = 59/237 (24%), Positives = 101/237 (41%), Gaps = 40/237 (16%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y+ A +++ A + G + LG MY NG GV +D K+A +YF A + NL
Sbjct: 413 YDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLA 472
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKG-----------------YTNAYINLGIMYMEGR 148
M+ G GV + AVE F+ E+G Y A + ++ +G
Sbjct: 473 QMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDEDYNAAVVQYLLLAEQGY 532
Query: 149 -------------------GVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
G Y +A + +A +G A I LGD ++ G G
Sbjct: 533 EVAQSNAAFILDQREATIVGENETYPRALLHWNRAASQGYTVARIKLGDYHFYG---FGT 589
Query: 190 EPDKDKAIVYYKMAADMS-SSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
+ D + A ++Y++A++ S++A L ++ GLG+++D A+ + A + D
Sbjct: 590 DVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPD 646
Score = 55.5 bits (132), Expect = 6e-07
Identities = 40/172 (23%), Positives = 76/172 (43%), Gaps = 16/172 (9%)
Query: 38 EEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDI 97
E+A ++ + A Y++ +K NG +++A Y QKA +
Sbjct: 118 EDAAKRRQMQEAEMIYQAGMK-------------ILNGSNRKSQKREAYRYLQKAAGMNH 164
Query: 98 PRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
+ + G + ++ + A E F TE+G LG +Y G GV S+ KA
Sbjct: 165 TKALERVSYALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLYASGLGVNSSQAKA 224
Query: 158 TECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSS 209
+ GN+ A+++LG Y++G +G+ + A+ +Y++ A+ +S
Sbjct: 225 LVYYTFGALGGNLIAHMILGYRYWAG---IGVLQSCESALTHYRLVANHVAS 273
Score = 45.1 bits (105), Expect = 8e-04
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
G+ G +++A Y + A +T A + + G + N A E F K
Sbjct: 136 GMKILNGSNRKSQKREAYRYLQKAAGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKL 195
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G+ + LG +Y SG LG+ + KA+VYY A + A+ L Y G+G
Sbjct: 196 TEEGSPKGQTGLGFLYASG---LGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIG 252
Query: 225 V 225
V
Sbjct: 253 V 253
>ref|XP_127076.1| (XM_127076) similar to Sel-1 homolog precursor (Suppressor of
lin-12-like protein) (Sel-1L) [Mus musculus]
sp|Q9Z2G6|SE1L_MOUSE Sel-1 homolog precursor (Suppressor of lin-12-like protein)
(Sel-1L)
dbj|BAB23750.1| (AK005023) Sel1 (suppressor of lin-12) 1 homolog (C. elegans)~data
source:MGD, source key:MGI:1329016,
evidence:ISS~putative [Mus musculus]
Length = 790
Score = 100 bits (249), Expect = 2e-20
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 5/197 (2%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
E +Y+ + G+ A V LG ++ GRGV ++ ++A +YF A + LG
Sbjct: 354 EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLG 413
Query: 106 VMYKEGRG-VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
MY EG VP+ + A+ YF+ A + G LG+ Y+ GRGV NY A + F+KA
Sbjct: 414 KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKA 473
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G V+ + LG +YY+G +G++ D +A+ Y+ +A+ A+ LA+ + G G
Sbjct: 474 AEQGWVDGQLQLGSMYYNG---IGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTG 530
Query: 225 VEKDKKKAEEYMQKACD 241
V + A E + C+
Sbjct: 531 VMRSCHTAVELFKNVCE 547
Score = 87.0 bits (214), Expect = 2e-16
Identities = 49/141 (34%), Positives = 75/141 (52%), Gaps = 1/141 (0%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRG-VPKDEKKAAEYFQKAVDNDIPRGYN 102
+ ++RA ++ A G A LG MY G VP+ + A YF+KA D P G +
Sbjct: 388 QNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQS 447
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
LG+ Y GRGV + A++YF+ A E+G+ + + LG MY G GV +Y +A + F
Sbjct: 448 GLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFN 507
Query: 163 KAMHKGNVEAYILLGDIYYSG 183
A G++ A+ L ++ SG
Sbjct: 508 LASQGGHILAFYNLAQMHASG 528
Score = 86.7 bits (213), Expect = 2e-16
Identities = 59/211 (27%), Positives = 100/211 (46%), Gaps = 15/211 (7%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
N +A +Y G +A+++LG Y G GV + + A ++ + V N + +
Sbjct: 268 NSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIGVLQSCESALTHY-RLVANHVASDIS 326
Query: 103 NLGVMYKEGRGVPKD-----------EKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGV 150
G + +P + E+ ++Y++ EKG A + LG +++ G RGV
Sbjct: 327 LTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGV 386
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSR 210
N+ +A + F A + GN A LG +Y G+D + + A+ Y+K AADM +
Sbjct: 387 EQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDI--VPQSNETALHYFKKAADMGNPV 444
Query: 211 AYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
GL +Y YG GV+ + A +Y QKA +
Sbjct: 445 GQSGLGMAYLYGRGVQVNYDLALKYFQKAAE 475
Score = 84.3 bits (207), Expect = 1e-15
Identities = 55/170 (32%), Positives = 82/170 (47%), Gaps = 7/170 (4%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E A ++K A G P+ LG+ Y GRGV + A +YFQKA + G LG
Sbjct: 428 ETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGS 487
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY G GV +D K+A++YF +A++ G+ A+ NL M+ G GV + A E F+
Sbjct: 488 MYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 547
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
+G ++ Y S D+ D + A+V Y + A+ A A
Sbjct: 548 RGRWSERLMTA--YNSYKDE-----DYNAAVVQYLLLAEQGYEVAQSNAA 590
Score = 72.0 bits (175), Expect = 6e-12
Identities = 59/237 (24%), Positives = 101/237 (41%), Gaps = 40/237 (16%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y+ A +++ A + G + LG MY NG GV +D K+A +YF A + NL
Sbjct: 463 YDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLA 522
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKG-----------------YTNAYINLGIMYMEGR 148
M+ G GV + AVE F+ E+G Y A + ++ +G
Sbjct: 523 QMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDEDYNAAVVQYLLLAEQGY 582
Query: 149 -------------------GVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
G Y +A + +A +G A I LGD ++ G G
Sbjct: 583 EVAQSNAAFILDQREATIVGENETYPRALLHWNRAASQGYTVARIKLGDYHFYG---FGT 639
Query: 190 EPDKDKAIVYYKMAADMS-SSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
+ D + A ++Y++A++ S++A L ++ GLG+++D A+ + A + D
Sbjct: 640 DVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPD 696
Score = 56.6 bits (135), Expect = 3e-07
Identities = 44/177 (24%), Positives = 82/177 (45%), Gaps = 6/177 (3%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y YK +E + E E A+ + ++ E + + I+ NG +++A Y QKA
Sbjct: 153 YDYKTDEKWGFCETEEDAA-KRRQMQEAEMIYQAGMKIL--NGSNRKSQKREAYRYLQKA 209
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPS 152
+ + + G + ++ + A E F TE+G LG +Y G GV S
Sbjct: 210 AGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLYASGLGVNS 269
Query: 153 NYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSS 209
+ KA + GN+ A+++LG Y++G +G+ + A+ +Y++ A+ +S
Sbjct: 270 SQAKALVYYTFGALGGNLIAHMILGYRYWAG---IGVLQSCESALTHYRLVANHVAS 323
Score = 45.1 bits (105), Expect = 8e-04
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
G+ G +++A Y + A +T A + + G + N A E F K
Sbjct: 186 GMKILNGSNRKSQKREAYRYLQKAAGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKL 245
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G+ + LG +Y SG LG+ + KA+VYY A + A+ L Y G+G
Sbjct: 246 TEEGSPKGQTGLGFLYASG---LGVNSSQAKALVYYTFGALGGNLIAHMILGYRYWAGIG 302
Query: 225 V 225
V
Sbjct: 303 V 303
>ref|NP_005056.3| (NM_005065) sel-1 suppressor of lin-12-like (C. elegans);
Suppressor of lin 12 (sel-1), C. elegans, homolog of;
sel-1 (suppressor of lin-12, C.elegans)-like [Homo
sapiens]
ref|XP_007325.4| (XM_007325) sel-1 suppressor of lin-12-like (C. elegans) [Homo
sapiens]
sp|Q9UBV2|SE1L_HUMAN Sel-1 homolog precursor (Suppressor of lin-12-like protein)
(Sel-1L)
dbj|BAA87904.1| (AB020335) Pancreas-specific gene [Homo sapiens]
dbj|BAA89204.1| (AB024763) TSA305 [Homo sapiens]
Length = 794
Score = 100 bits (249), Expect = 2e-20
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 5/197 (2%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
E +Y+ + G+ A V LG ++ GRGV ++ ++A +YF A + LG
Sbjct: 358 EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLG 417
Query: 106 VMYKEGRG-VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
MY EG VP+ + A+ YF+ A + G LG+ Y+ GRGV NY A + F+KA
Sbjct: 418 KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKA 477
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G V+ + LG +YY+G +G++ D +A+ Y+ +A+ A+ LA+ + G G
Sbjct: 478 AEQGWVDGQLQLGSMYYNG---IGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTG 534
Query: 225 VEKDKKKAEEYMQKACD 241
V + A E + C+
Sbjct: 535 VMRSCHTAVELFKNVCE 551
Score = 87.0 bits (214), Expect = 2e-16
Identities = 49/141 (34%), Positives = 75/141 (52%), Gaps = 1/141 (0%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRG-VPKDEKKAAEYFQKAVDNDIPRGYN 102
+ ++RA ++ A G A LG MY G VP+ + A YF+KA D P G +
Sbjct: 392 QNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQS 451
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
LG+ Y GRGV + A++YF+ A E+G+ + + LG MY G GV +Y +A + F
Sbjct: 452 GLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFN 511
Query: 163 KAMHKGNVEAYILLGDIYYSG 183
A G++ A+ L ++ SG
Sbjct: 512 LASQGGHILAFYNLAQMHASG 532
Score = 86.3 bits (212), Expect = 3e-16
Identities = 59/211 (27%), Positives = 100/211 (46%), Gaps = 15/211 (7%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
N +A +Y G +A+++LG Y G GV + + A ++ + V N + +
Sbjct: 272 NSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHY-RLVANHVASDIS 330
Query: 103 NLGVMYKEGRGVPKD-----------EKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGV 150
G + +P + E+ ++Y++ EKG A + LG +++ G RGV
Sbjct: 331 LTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGV 390
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSR 210
N+ +A + F A + GN A LG +Y G+D + + A+ Y+K AADM +
Sbjct: 391 EQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDI--VPQSNETALHYFKKAADMGNPV 448
Query: 211 AYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
GL +Y YG GV+ + A +Y QKA +
Sbjct: 449 GQSGLGMAYLYGRGVQVNYDLALKYFQKAAE 479
Score = 82.4 bits (202), Expect = 4e-15
Identities = 52/170 (30%), Positives = 80/170 (46%), Gaps = 7/170 (4%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E A ++K A G P+ LG+ Y GRGV + A +YFQKA + G LG
Sbjct: 432 ETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGS 491
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY G GV +D K+A++YF +A++ G+ A+ NL M+ G GV + A E F+
Sbjct: 492 MYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 551
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
+G ++ Y + D + A++ Y + A+ A A
Sbjct: 552 RGRWSERLMTAYNSYK-------DGDYNAAVIQYLLLAEQGYEVAQSNAA 594
Score = 72.4 bits (176), Expect = 4e-12
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 40/237 (16%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y+ A +++ A + G + LG MY NG GV +D K+A +YF A + NL
Sbjct: 467 YDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLA 526
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKG-----------------YTNAYINLGIMYMEGR 148
M+ G GV + AVE F+ E+G Y A I ++ +G
Sbjct: 527 QMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGY 586
Query: 149 -------------------GVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
G Y +A + +A +G A I LGD ++ G G
Sbjct: 587 EVAQSNAAFILDQREASIVGENETYPRALLHWNRAASQGYTVARIKLGDYHFYG---FGT 643
Query: 190 EPDKDKAIVYYKMAADMS-SSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
+ D + A ++Y++A++ S++A L ++ GLG+++D A+ + A + D
Sbjct: 644 DVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPD 700
Score = 70.9 bits (172), Expect = 1e-11
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 82 EKKAAEYFQKAVDNDIPRGYNNLGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINL 140
E+ +Y+Q + + LG ++ G RGV ++ ++A +YF +A G ++A L
Sbjct: 357 EEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFL 416
Query: 141 GIMYMEGRG-VPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
G MY EG VP + A F+KA GN LG Y G G++ + D A+ Y
Sbjct: 417 GKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGR---GVQVNYDLALKY 473
Query: 200 YKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
++ AA+ L Y G+GV++D K+A +Y A
Sbjct: 474 FQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Score = 60.1 bits (144), Expect = 2e-08
Identities = 45/177 (25%), Positives = 83/177 (46%), Gaps = 6/177 (3%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y YK +E + E E A+ + ++ E + + I+ NG +++A Y QKA
Sbjct: 157 YDYKADEKWGFCETEEEAA-KRRQMQEAEMMYQTGMKIL--NGSNKKSQKREAYRYLQKA 213
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPS 152
+ + + G +P++ + A E F TE+G LG +Y G GV S
Sbjct: 214 ASMNHTKALERVSYALLFGDYLPQNIQAAREMFEKLTEEGSPKGQTALGFLYASGLGVNS 273
Query: 153 NYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSS 209
+ KA + GN+ A+++LG Y++G +G+ + A+ +Y++ A+ +S
Sbjct: 274 SQAKALVYYTFGALGGNLIAHMVLGYRYWAG---IGVLQSCESALTHYRLVANHVAS 327
Score = 50.8 bits (120), Expect = 1e-05
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
G+ G +++A Y + A +T A + + G +P N A E F K
Sbjct: 190 GMKILNGSNKKSQKREAYRYLQKAASMNHTKALERVSYALLFGDYLPQNIQAAREMFEKL 249
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G+ + LG +Y SG LG+ + KA+VYY A + A+ L Y G+G
Sbjct: 250 TEEGSPKGQTALGFLYASG---LGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIG 306
Query: 225 V 225
V
Sbjct: 307 V 307
>gb|AAF29413.1|AF052059_1 (AF052059) SEL1L [Homo sapiens]
gb|AAL40905.1| (AF198647) sel-1 [Homo sapiens]
Length = 794
Score = 100 bits (249), Expect = 2e-20
Identities = 62/197 (31%), Positives = 102/197 (51%), Gaps = 5/197 (2%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
E +Y+ + G+ A V LG ++ GRGV ++ ++A +YF A + LG
Sbjct: 358 EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLG 417
Query: 106 VMYKEGRG-VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
MY EG VP+ + A+ YF+ A + G LG+ Y+ GRGV NY A + F+KA
Sbjct: 418 KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKA 477
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G V+ + LG +YY+G +G++ D +A+ Y+ +A+ A+ LA+ + G G
Sbjct: 478 AEQGWVDGQLQLGSMYYNG---IGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTG 534
Query: 225 VEKDKKKAEEYMQKACD 241
V + A E + C+
Sbjct: 535 VMRSCHTAVELFKNVCE 551
Score = 87.0 bits (214), Expect = 2e-16
Identities = 49/141 (34%), Positives = 75/141 (52%), Gaps = 1/141 (0%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRG-VPKDEKKAAEYFQKAVDNDIPRGYN 102
+ ++RA ++ A G A LG MY G VP+ + A YF+KA D P G +
Sbjct: 392 QNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQS 451
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
LG+ Y GRGV + A++YF+ A E+G+ + + LG MY G GV +Y +A + F
Sbjct: 452 GLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFN 511
Query: 163 KAMHKGNVEAYILLGDIYYSG 183
A G++ A+ L ++ SG
Sbjct: 512 LASQGGHILAFYNLAQMHASG 532
Score = 86.3 bits (212), Expect = 3e-16
Identities = 59/211 (27%), Positives = 100/211 (46%), Gaps = 15/211 (7%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
N +A +Y G +A+++LG Y G GV + + A ++ + V N + +
Sbjct: 272 NSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESALTHY-RLVANHVASDIS 330
Query: 103 NLGVMYKEGRGVPKD-----------EKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGV 150
G + +P + E+ ++Y++ EKG A + LG +++ G RGV
Sbjct: 331 LTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGV 390
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSR 210
N+ +A + F A + GN A LG +Y G+D + + A+ Y+K AADM +
Sbjct: 391 EQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDI--VPQSNETALHYFKKAADMGNPV 448
Query: 211 AYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
GL +Y YG GV+ + A +Y QKA +
Sbjct: 449 GQSGLGMAYLYGRGVQVNYDLALKYFQKAAE 479
Score = 82.4 bits (202), Expect = 4e-15
Identities = 52/170 (30%), Positives = 80/170 (46%), Gaps = 7/170 (4%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E A ++K A G P+ LG+ Y GRGV + A +YFQKA + G LG
Sbjct: 432 ETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGS 491
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY G GV +D K+A++YF +A++ G+ A+ NL M+ G GV + A E F+
Sbjct: 492 MYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 551
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
+G ++ Y + D + A++ Y + A+ A A
Sbjct: 552 RGRWSERLMTAYNSYK-------DGDYNAAVIQYLLLAEQGYEVAQSNAA 594
Score = 72.4 bits (176), Expect = 4e-12
Identities = 60/237 (25%), Positives = 101/237 (42%), Gaps = 40/237 (16%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y+ A +++ A + G + LG MY NG GV +D K+A +YF A + NL
Sbjct: 467 YDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLA 526
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKG-----------------YTNAYINLGIMYMEGR 148
M+ G GV + AVE F+ E+G Y A I ++ +G
Sbjct: 527 QMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDGDYNAAVIQYLLLAEQGY 586
Query: 149 -------------------GVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
G Y +A + +A +G A I LGD ++ G G
Sbjct: 587 EVAQSNAAFILDQREASIVGENETYPRALLHWNRAASQGYTVARIKLGDYHFYG---FGT 643
Query: 190 EPDKDKAIVYYKMAADMS-SSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
+ D + A ++Y++A++ S++A L ++ GLG+++D A+ + A + D
Sbjct: 644 DVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPD 700
Score = 70.9 bits (172), Expect = 1e-11
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 82 EKKAAEYFQKAVDNDIPRGYNNLGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINL 140
E+ +Y+Q + + LG ++ G RGV ++ ++A +YF +A G ++A L
Sbjct: 357 EEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFL 416
Query: 141 GIMYMEGRG-VPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
G MY EG VP + A F+KA GN LG Y G G++ + D A+ Y
Sbjct: 417 GKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGR---GVQVNYDLALKY 473
Query: 200 YKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
++ AA+ L Y G+GV++D K+A +Y A
Sbjct: 474 FQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Score = 59.7 bits (143), Expect = 3e-08
Identities = 46/177 (25%), Positives = 80/177 (44%), Gaps = 6/177 (3%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y YK +E + E E A+ K + Y G+ NG +++A Y QKA
Sbjct: 157 YDYKADEKWGFCETEEEAA--KRRQMQEAEMVYQT-GMKILNGSNKKSQKREAYRYLQKA 213
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPS 152
+ + + G +P++ + A E F TE+G LG +Y G GV S
Sbjct: 214 ASMNHTKALERVSYALLFGDYLPQNIQAAREMFEKLTEEGSPKGQTALGFLYASGLGVNS 273
Query: 153 NYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSS 209
+ KA + GN+ A+++LG Y++G +G+ + A+ +Y++ A+ +S
Sbjct: 274 SQAKALVYYTFGALGGNLIAHMVLGYRYWAG---IGVLQSCESALTHYRLVANHVAS 327
Score = 50.8 bits (120), Expect = 1e-05
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
G+ G +++A Y + A +T A + + G +P N A E F K
Sbjct: 190 GMKILNGSNKKSQKREAYRYLQKAASMNHTKALERVSYALLFGDYLPQNIQAAREMFEKL 249
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G+ + LG +Y SG LG+ + KA+VYY A + A+ L Y G+G
Sbjct: 250 TEEGSPKGQTALGFLYASG---LGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIG 306
Query: 225 V 225
V
Sbjct: 307 V 307
>gb|AAK64159.1| (AY039982) unknown protein [Arabidopsis thaliana]
Length = 678
Score = 100 bits (249), Expect = 2e-20
Identities = 58/173 (33%), Positives = 96/173 (54%), Gaps = 11/173 (6%)
Query: 71 MYENG-------RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVE 123
MY+NG RG+ +D KA +F KAVD PR LG +Y G GV ++ KA+E
Sbjct: 245 MYKNGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALE 304
Query: 124 YFRIATEKGYTNAYINLGIMYMEGRGV-PSNYVKATECFRKAMHKGNVEAYILLGDIYYS 182
+ +A ++G +A+ +G +Y++G GV NY KA E F KA+ + + LG +Y
Sbjct: 305 WLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLK 364
Query: 183 GNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
G +G+ D +A Y+ +AA+ +A+ LA+ + G+G++K+ + A +
Sbjct: 365 G---IGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSF 414
Score = 91.3 bits (225), Expect = 9e-18
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 45/237 (18%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDE-KKAAEYFQKAVDNDIPRGYN 102
+ Y +A + A K G A+ +G +Y G GV K KA EYF+KAVDN+ P G+
Sbjct: 297 RNYTKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHY 356
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
NLGV+Y +G GV +D ++A +YF +A G A+ L M+ G G+ N AT ++
Sbjct: 357 NLGVLYLKGIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYK 416
Query: 163 KAMHKG--------NVEAYILLGD-----IYYSGNDQLGIE------------------- 190
+G +EAY L GD I YS ++G E
Sbjct: 417 LVAERGPWSSLSRWALEAY-LKGDVGKALILYSRMAEMGYEVAQSNAAWILDKYGERSMC 475
Query: 191 -------PDK---DKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD-KKKAEEYM 236
DK ++A + A++ + A + ++Y YG G E+D + AE YM
Sbjct: 476 MGVSGFCTDKERHERAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAYM 532
Score = 89.7 bits (221), Expect = 3e-17
Identities = 49/163 (30%), Positives = 92/163 (56%), Gaps = 4/163 (2%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+++ +A ++ A+ GEP + LLG +Y G GV ++ KA E+ A + +N
Sbjct: 261 RDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTLAAKEGLYSAFNG 320
Query: 104 LGVMYKEGRGV-PKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
+G +Y +G GV K+ KA EYF A + + + NLG++Y++G GV + +AT+ F
Sbjct: 321 IGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFF 380
Query: 163 KAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
A + G +A+ L ++++G +G++ + + A +YK+ A+
Sbjct: 381 VAANAGQPKAFYQLAKMFHTG---VGLKKNLEMATSFYKLVAE 420
Score = 77.8 bits (190), Expect = 1e-13
Identities = 58/255 (22%), Positives = 108/255 (41%), Gaps = 47/255 (18%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y+Y + K Y +A +++ A+ N +P + LG++Y G GV +D ++A +YF A
Sbjct: 323 YLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFFVA 382
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGI-MYMEG---- 147
+ P+ + L M+ G G+ K+ + A ++++ E+G ++ + Y++G
Sbjct: 383 ANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVAERGPWSSLSRWALEAYLKGDVGK 442
Query: 148 ---------------------------------RGV------PSNYVKATECFRKAMHKG 168
GV + +A + +A +G
Sbjct: 443 ALILYSRMAEMGYEVAQSNAAWILDKYGERSMCMGVSGFCTDKERHERAHSLWWRASEQG 502
Query: 169 NVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD 228
N A +L+GD YY G G E D +A Y A S+++A L +++G G+ D
Sbjct: 503 NEHAALLIGDAYYYGR---GTERDFVRAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFD 559
Query: 229 KKKAEEYMQKACDFD 243
A+ Y ++ D
Sbjct: 560 LHLAKRYYDESLQSD 574
Score = 47.8 bits (112), Expect = 1e-04
Identities = 53/213 (24%), Positives = 85/213 (39%), Gaps = 22/213 (10%)
Query: 42 NNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGY 101
N + E A ++A G+P A ++G +Y G G+ +++ K+ + N G
Sbjct: 104 NFRLMEEAVDEIEAASSAGDPHAQSIMGFVY--GIGMMREKSKSKSFLHH---NFAAAGG 158
Query: 102 NNLGVMYKEGRGVPKD-EKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
N M + +D KAV+ + E + I+ +E + S +
Sbjct: 159 NMQSKMALAFTYLRQDMHDKAVQLYAELAETAVNSFLISKDSPVVEPTRIHSGTEENKGA 218
Query: 161 FRKAM--------------HKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADM 206
RK+ KGN A G YY G G+ D KA+ ++ A D
Sbjct: 219 LRKSRGEEDEDFQILEYQAQKGNANAMYKNGLFYYFG--LRGLRRDHTKALHWFLKAVDK 276
Query: 207 SSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
R+ E L E Y G GVE++ KA E++ A
Sbjct: 277 GEPRSMELLGEIYARGAGVERNYTKALEWLTLA 309
>dbj|BAB12403.1| (AB048195) SEL1L [Mesocricetus auratus]
Length = 794
Score = 100 bits (248), Expect = 2e-20
Identities = 61/197 (30%), Positives = 102/197 (50%), Gaps = 5/197 (2%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
E +Y+ + G+ A V LG ++ GRGV ++ ++A +YF A + LG
Sbjct: 358 EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLG 417
Query: 106 VMYKEGRG-VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
MY EG VP+ + A+ YF+ A + G LG+ Y+ GRG+ NY A + F+KA
Sbjct: 418 KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGIQVNYDLALKYFQKA 477
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G V+ + LG +YY+G +G++ D +A+ Y+ +A+ A+ LA+ + G G
Sbjct: 478 AEQGWVDGQLQLGSMYYNG---IGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTG 534
Query: 225 VEKDKKKAEEYMQKACD 241
V + A E + C+
Sbjct: 535 VMRSCHTAVELFKNVCE 551
Score = 86.7 bits (213), Expect = 2e-16
Identities = 48/141 (34%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRG-VPKDEKKAAEYFQKAVDNDIPRGYN 102
+ ++RA ++ A G A LG MY G VP+ + A YF+KA D P G +
Sbjct: 392 QNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQS 451
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
LG+ Y GRG+ + A++YF+ A E+G+ + + LG MY G GV +Y +A + F
Sbjct: 452 GLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFN 511
Query: 163 KAMHKGNVEAYILLGDIYYSG 183
A G++ A+ L ++ SG
Sbjct: 512 LASQGGHILAFYNLAQMHASG 532
Score = 84.3 bits (207), Expect = 1e-15
Identities = 57/211 (27%), Positives = 99/211 (46%), Gaps = 15/211 (7%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
N +A +Y G +A+++LG Y G GV + + ++ + V N + +
Sbjct: 272 NSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIGVLQSCESVLTHY-RLVANHVASDIS 330
Query: 103 NLGVMYKEGRGVPKD-----------EKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGV 150
G + +P + E+ ++Y++ EKG A + LG +++ G RGV
Sbjct: 331 LTGGSVVQRIRLPDEVENPGMNSGMLEEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGV 390
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSR 210
N+ +A + F A + GN A LG +Y G+D + + A+ Y+K AADM +
Sbjct: 391 EQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDI--VPQSNETALHYFKKAADMGNPV 448
Query: 211 AYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
GL +Y YG G++ + A +Y QKA +
Sbjct: 449 GQSGLGMAYLYGRGIQVNYDLALKYFQKAAE 479
Score = 82.4 bits (202), Expect = 4e-15
Identities = 52/170 (30%), Positives = 80/170 (46%), Gaps = 7/170 (4%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E A ++K A G P+ LG+ Y GRG+ + A +YFQKA + G LG
Sbjct: 432 ETALHYFKKAADMGNPVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGS 491
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY G GV +D K+A++YF +A++ G+ A+ NL M+ G GV + A E F+
Sbjct: 492 MYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCE 551
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
+G ++ Y + D + A+V Y + A+ A A
Sbjct: 552 RGRWSERLMTAYNSYK-------DGDYNAAVVQYLLLAEQGYEVAQSNAA 594
Score = 72.0 bits (175), Expect = 6e-12
Identities = 59/237 (24%), Positives = 101/237 (41%), Gaps = 40/237 (16%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y+ A +++ A + G + LG MY NG GV +D K+A +YF A + NL
Sbjct: 467 YDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLA 526
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKG-----------------YTNAYINLGIMYMEGR 148
M+ G GV + AVE F+ E+G Y A + ++ +G
Sbjct: 527 QMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNSYKDGDYNAAVVQYLLLAEQGY 586
Query: 149 -------------------GVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
G Y +A + +A +G A I LGD ++ G G
Sbjct: 587 EVAQSNAAFILDQREATIVGENETYPRALLHWNRAASQGYTVARIKLGDYHFYG---FGT 643
Query: 190 EPDKDKAIVYYKMAADMS-SSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
+ D + A ++Y++A++ S++A L ++ GLG+++D A+ + A + D
Sbjct: 644 DVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAEASPD 700
Score = 71.2 bits (173), Expect = 1e-11
Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 5/160 (3%)
Query: 82 EKKAAEYFQKAVDNDIPRGYNNLGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINL 140
E+ +Y+Q + + LG ++ G RGV ++ ++A +YF +A G ++A L
Sbjct: 357 EEDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFL 416
Query: 141 GIMYMEGRG-VPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
G MY EG VP + A F+KA GN LG Y G GI+ + D A+ Y
Sbjct: 417 GKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGR---GIQVNYDLALKY 473
Query: 200 YKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
++ AA+ L Y G+GV++D K+A +Y A
Sbjct: 474 FQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLA 513
Score = 54.7 bits (130), Expect = 1e-06
Identities = 43/177 (24%), Positives = 82/177 (46%), Gaps = 6/177 (3%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y YK +E + E E A+ + ++ E + + I+ NG +++A Y QKA
Sbjct: 157 YDYKTDEKWGFCETEEDAA-KRRQMQEAEMIYQAGMKIL--NGSNRKSQKREAYRYLQKA 213
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPS 152
+ + + G + ++ + A E F TE+G LG +Y+ G GV S
Sbjct: 214 AGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTALGFLYVSGLGVNS 273
Query: 153 NYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSS 209
+ KA + GN+ A+++LG Y++G +G+ + + +Y++ A+ +S
Sbjct: 274 SQAKALVYYTFGALGGNLIAHMVLGYRYWAG---IGVLQSCESVLTHYRLVANHVAS 327
Score = 47.0 bits (110), Expect = 2e-04
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
G+ G +++A Y + A +T A + + G + N A E F K
Sbjct: 190 GMKILNGSNRKSQKREAYRYLQKAAGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKL 249
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G+ + LG +Y SG LG+ + KA+VYY A + A+ L Y G+G
Sbjct: 250 TEEGSPKGQTALGFLYVSG---LGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIG 306
Query: 225 V 225
V
Sbjct: 307 V 307
>ref|NP_651179.1| (NM_142922) BcDNA:LD23587 gene product [Drosophila melanogaster]
gb|AAD55437.1|AF181652_1 (AF181652) BcDNA.LD23587 [Drosophila melanogaster]
gb|AAF56178.1| (AE003744) BcDNA:LD23587 gene product [Drosophila melanogaster]
Length = 819
Score = 100 bits (248), Expect = 2e-20
Identities = 69/229 (30%), Positives = 98/229 (42%), Gaps = 34/229 (14%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
+ A ++ A + G+P+ LG+MY G GVPKD KA YF +A D G LG
Sbjct: 392 DAAFGYFSKAAEMGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGN 451
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY G GV D K A +YF +AT+ G+ AY NLG+M G G+ + A E F+
Sbjct: 452 MYFTGNGVKTDYKLAFKYFNLATQSGHVLAYYNLGVMNAYGMGMLRSCPAAVEFFKTVSE 511
Query: 167 KGNVEAYILLGDIYYSGN------------DQLGIE----------------------PD 192
+G + +++ Y N ++G E D
Sbjct: 512 RGRWSSRLMMAYSDYKNNRIDEAYMQYSLMAEMGYEVAQSNAAFLLDRKEVHVFNDRHED 571
Query: 193 KDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
+A Y+K AA S A L + Y YG G D + A +KA +
Sbjct: 572 LIRAFYYWKRAAGQGYSAAQVKLGDYYYYGWGTSTDFETAAALYRKASE 620
Score = 90.9 bits (224), Expect = 1e-17
Identities = 55/172 (31%), Positives = 89/172 (50%), Gaps = 5/172 (2%)
Query: 35 YKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRG-VPKDEKKAAEYFQKAV 93
Y+G + +++++A ++K A G + LG +Y G + D A YF KA
Sbjct: 344 YQGGKV-TEQDHQKALEYFKMAADAGSAVGIAFLGKLYLEGSDQIRADNDAAFGYFSKAA 402
Query: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSN 153
+ P G + LG+MY +G GVPKD KA+ YF A ++G+ + + LG MY G GV ++
Sbjct: 403 EMGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQGWVDGQLQLGNMYFTGNGVKTD 462
Query: 154 YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
Y A + F A G+V AY LG + G +G+ A+ ++K ++
Sbjct: 463 YKLAFKYFNLATQSGHVLAYYNLGVMNAYG---MGMLRSCPAAVEFFKTVSE 511
Score = 76.6 bits (187), Expect = 2e-13
Identities = 61/218 (27%), Positives = 94/218 (42%), Gaps = 13/218 (5%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
++Y N A Y A A + +G Y G VP +KA ++++
Sbjct: 226 FLYSVGVGGKNVSQPLALIHYSLAALGDNTPAQMAMGYRYLYGINVPISCEKALIHYKRV 285
Query: 93 VDNDIPR-GYNNLGVMYK-------EGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMY 144
+ + N V+++ E G E + V+Y+++ +KG + + LG +Y
Sbjct: 286 AKKVASKITFANGPVVHRVRLLDDLENPG--SSETEIVDYYKLLADKGDIQSQVGLGQVY 343
Query: 145 MEGRGVPS-NYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMA 203
+G V ++ KA E F+ A G+ LG +Y G+DQ I D D A Y+ A
Sbjct: 344 YQGGKVTEQDHQKALEYFKMAADAGSAVGIAFLGKLYLEGSDQ--IRADNDAAFGYFSKA 401
Query: 204 ADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
A+M GL Y GLGV KD KA Y +A D
Sbjct: 402 AEMGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAAD 439
Score = 70.9 bits (172), Expect = 1e-11
Identities = 64/240 (26%), Positives = 101/240 (41%), Gaps = 41/240 (17%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K+ +A S++ A G + LG MY G GV D K A +YF A + Y N
Sbjct: 425 KDSIKALSYFTQAADQGWVDGQLQLGNMYFTGNGVKTDYKLAFKYFNLATQSGHVLAYYN 484
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKG------------YTN-----AYINLGIMYME 146
LGVM G G+ + AVE+F+ +E+G Y N AY+ +M
Sbjct: 485 LGVMNAYGMGMLRSCPAAVEFFKTVSERGRWSSRLMMAYSDYKNNRIDEAYMQYSLMAEM 544
Query: 147 GRGVP--------------------SNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQ 186
G V + ++A +++A +G A + LGD YY G
Sbjct: 545 GYEVAQSNAAFLLDRKEVHVFNDRHEDLIRAFYYWKRAAGQGYSAAQVKLGDYYYYG--- 601
Query: 187 LGIEPDKDKAIVYYKMAADMS-SSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
G D + A Y+ A++ +++A L ++ GLG++KD A+ A + + D
Sbjct: 602 WGTSTDFETAAALYRKASEQQYNAQAMFNLGYMHEQGLGMKKDWHLAKRLYDLAAETNSD 661
Score = 63.5 bits (153), Expect = 2e-09
Identities = 49/160 (30%), Positives = 74/160 (45%), Gaps = 5/160 (3%)
Query: 82 EKKAAEYFQKAVDNDIPRGYNNLG-VMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
E + +Y++ D + LG V Y+ G+ +D +KA+EYF++A + G L
Sbjct: 317 ETEIVDYYKLLADKGDIQSQVGLGQVYYQGGKVTEQDHQKALEYFKMAADAGSAVGIAFL 376
Query: 141 GIMYMEGRG-VPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
G +Y+EG + ++ A F KA G+ LG +Y G LG+ D KA+ Y
Sbjct: 377 GKLYLEGSDQIRADNDAAFGYFSKAAEMGDPVGQSGLGLMYLKG---LGVPKDSIKALSY 433
Query: 200 YKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
+ AAD L Y G GV+ D K A +Y A
Sbjct: 434 FTQAADQGWVDGQLQLGNMYFTGNGVKTDYKLAFKYFNLA 473
>ref|NP_455743.1| (NC_003198) putative secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD08375.1| (AL627269) putative secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 509
Score = 99.8 bits (247), Expect = 3e-20
Identities = 51/161 (31%), Positives = 88/161 (53%), Gaps = 2/161 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K++ A +Y+ A G A +G+M+ G V +D ++A +++KA +P +
Sbjct: 294 KDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTH 353
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG+M GRGV + +++A+ ++R A ++ + A LG+ Y GRGVP N A + + K
Sbjct: 354 LGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLK 413
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAA 204
A +G A + LG+IY G G+ D +A ++Y MA+
Sbjct: 414 AAEQGFTPAQLALGEIYAHGRQ--GVPKDNKQAYIWYYMAS 452
Score = 87.0 bits (214), Expect = 2e-16
Identities = 43/116 (37%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
+++Y++A ++Y+ A + G P A LGIM GRGV + +++A +++KA D +
Sbjct: 329 SQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQY 388
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR-GVPSNYVKA 157
LGV Y GRGVP++ + A++++ A E+G+T A + LG +Y GR GVP + +A
Sbjct: 389 QLGVAYSMGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQA 444
Score = 84.0 bits (206), Expect = 1e-15
Identities = 53/165 (32%), Positives = 85/165 (51%), Gaps = 4/165 (2%)
Query: 69 GIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIA 128
G+ Y NG + KD A E++++A + + +GVM+ +G V +D ++A+ ++R A
Sbjct: 283 GVWYYNGYHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKA 342
Query: 129 TEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLG 188
+G A +LGIM GRGV + +A +RKA + +A LG Y G G
Sbjct: 343 ARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGR---G 399
Query: 189 IEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG-LGVEKDKKKA 232
+ + A+ +Y AA+ + A L E Y +G GV KD K+A
Sbjct: 400 VPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQA 444
Score = 81.3 bits (199), Expect = 1e-14
Identities = 58/232 (25%), Positives = 100/232 (43%), Gaps = 37/232 (15%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGY-- 101
++Y++ A + A +N A + LG+ Y G GVP+D ++A + + + G+
Sbjct: 188 QDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSYTPGHIP 247
Query: 102 --------------------------------NNLGVMYKEGRGVPKDEKKAVEYFRIAT 129
N GV Y G + KD A+E++R A
Sbjct: 248 LNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNGYHLLKDHNLALEWYRRAA 307
Query: 130 EKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
+G A +G+M+M+G V +Y +A +RKA +G A LG + G G+
Sbjct: 308 AQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGR---GV 364
Query: 190 EPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
+AI +Y+ AA ++A L +Y G GV ++ + A ++ KA +
Sbjct: 365 AQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAE 416
Score = 77.8 bits (190), Expect = 1e-13
Identities = 50/172 (29%), Positives = 85/172 (49%), Gaps = 5/172 (2%)
Query: 68 LGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRI 127
LG+MY +G+GVP+D ++ A +KA +N LGV Y G GVP+D ++AV +
Sbjct: 176 LGVMYAHGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Query: 128 ATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL 187
YT +I L +Y + P++ V + +RK + + G YY+G L
Sbjct: 236 GIPGSYTPGHIPLNALY--DKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNGYHLL 293
Query: 188 GIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
D + A+ +Y+ AA + A + + + G V +D ++A + +KA
Sbjct: 294 ---KDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKA 342
Score = 73.6 bits (179), Expect = 2e-12
Identities = 64/220 (29%), Positives = 92/220 (41%), Gaps = 21/220 (9%)
Query: 30 KRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYF 89
+ Y EE +E E+ A + G+ A LG Y GR V D K A ++
Sbjct: 26 EERYPPDSEECQYVQELEQKA-------EQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWL 78
Query: 90 QKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRG 149
+KA Y LG Y G P +KA+E++R A E G ++ LG YM G G
Sbjct: 79 EKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDG 138
Query: 150 VPSNYVKATECFRKAMHKGN-----------VEAYILLGDIYYSGNDQLGIEPDKDKAIV 198
P N A E +RKA N A LG +Y G G+ D + +
Sbjct: 139 FPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYAHGQ---GVPQDYQQTAI 195
Query: 199 YYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQK 238
+ AA+ A L +Y YG GV +D ++A ++ +
Sbjct: 196 LMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNE 235
Score = 59.3 bits (142), Expect = 4e-08
Identities = 38/123 (30%), Positives = 63/123 (50%), Gaps = 3/123 (2%)
Query: 117 DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILL 176
+E + V+ E+G A +LG Y EGR V +Y A + KA +G+ +Y +L
Sbjct: 34 EECQYVQELEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFIL 93
Query: 177 GDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYM 236
G Y G + + KA+ +Y+ AA++ S E L ++Y YG G ++ + A E+
Sbjct: 94 GYHYNYGEN---FPLSRQKALEWYRKAAELGDSSTQEILGDAYMYGDGFPQNTQLALEWY 150
Query: 237 QKA 239
+KA
Sbjct: 151 RKA 153
>gb|AAD41587.1|AF057704_3 (AF057704) enhanced entry protein EnhC [Legionella pneumophila]
Length = 1201
Score = 99.8 bits (247), Expect = 3e-20
Identities = 63/197 (31%), Positives = 103/197 (51%), Gaps = 5/197 (2%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y +A Y++A G+ L L +MYE G+GVP + KA F++A + P + L
Sbjct: 916 YAQALKAYENAAAKGDMLGAYNLALMYEYGKGVPVNYSKALSLFKEASEKGAPEAMSQLA 975
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAM 165
MY G G P++E++A+ +++ A G NA LG++ G GV ++ A ++ A
Sbjct: 976 GMYFYGLGQPRNEQQALVWYKKAASLGNGNALYALGLLSETGVGVKLDFPDALRYYQDAS 1035
Query: 166 HKGNVEAYILLGDIYYSGNDQLGIEPD-KDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
KGN +A + L +Y+ G LG+E D K A +Y K+A ++ Y+ L Y G
Sbjct: 1036 DKGNEKAMLALARMYHYG---LGVEKDHKRSASIYQKLAQKQNAYAQYQ-LGTYYIEGTA 1091
Query: 225 VEKDKKKAEEYMQKACD 241
E+ +K E +Q+A +
Sbjct: 1092 GERLPEKGRELLQQASE 1108
Score = 72.0 bits (175), Expect = 6e-12
Identities = 56/228 (24%), Positives = 98/228 (42%), Gaps = 35/228 (15%)
Query: 42 NNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGY 101
N ++ E+A + + G A +LLG++Y+ G G+ D KA ++Q+A N + +
Sbjct: 672 NRQKQEQAFKVAEEQAETGNENAALLLGMLYDRGIGITADPAKAMYWYQQAGQNPVSQFI 731
Query: 102 NNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIM------------------ 143
LG EG+GV +D++K ++ + + + ++ A NL ++
Sbjct: 732 --LGTYITEGKGVAQDKEKGLDLLKQSADSQFSYADFNLAVLKQQSGEDFLPNLIESYKL 789
Query: 144 ------------YMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEP 191
Y+ VP +A E ++ KG+ A + L + G LG P
Sbjct: 790 GNSHAGIVLADYYLSQSSVPEQMNQAKEIYKGLADKGDQYAQLKLAYMLQKG---LGAAP 846
Query: 192 DKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
D A +Y +A+ + A L + YQ G E D A+ + QKA
Sbjct: 847 DLAGAQHWYTASAEQGNPEAQYLLGQFYQLGETGEPDYNLAKHWYQKA 894
Score = 70.5 bits (171), Expect = 2e-11
Identities = 59/199 (29%), Positives = 94/199 (46%), Gaps = 11/199 (5%)
Query: 44 KEYERAASFYKSAIKNGEPLA-YVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
K + A +Y A KNG P+A Y L E+ ++K + KA +N P+
Sbjct: 135 KNTDIARRYYIDAAKNGNPIAQYTLAEYFLESKHA--GNKKLGIIWLNKAAENGDPKALT 192
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
LG Y G+ V KD K VE A + YT A + LG + + + + Y +A +
Sbjct: 193 ELGRFYVAGQMVAKDTAKGVELLNKAASEQYTPAMLELGKLAL----MQNQYDEAIQWLN 248
Query: 163 KAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG 222
KA + + EA + L IY D+ + K ++ K AA S +A + LA YQ G
Sbjct: 249 KA-EEQSTEATLELAHIYL--QDKSPVYDPKTGFLLVLK-AAQNGSVQAQKELANLYQKG 304
Query: 223 LGVEKDKKKAEEYMQKACD 241
+GV D++ ++++ KA +
Sbjct: 305 IGVAADEELSKQWTLKAAE 323
Score = 61.2 bits (147), Expect = 1e-08
Identities = 39/126 (30%), Positives = 57/126 (44%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
++A +YK A G A LG++ E G GV D A Y+Q A D + L
Sbjct: 989 QQALVWYKKAASLGNGNALYALGLLSETGVGVKLDFPDALRYYQDASDKGNEKAMLALAR 1048
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY G GV KD K++ ++ +K A LG Y+EG K E ++A
Sbjct: 1049 MYHYGLGVEKDHKRSASIYQKLAQKQNAYAQYQLGTYYIEGTAGERLPEKGRELLQQASE 1108
Query: 167 KGNVEA 172
G+++A
Sbjct: 1109 NGSLQA 1114
Score = 57.8 bits (138), Expect = 1e-07
Identities = 52/212 (24%), Positives = 88/212 (40%), Gaps = 41/212 (19%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVM 107
+A +Y+ A +N P++ +LG G+GV +D++K + +++ D+ NL V+
Sbjct: 714 KAMYWYQQAGQN--PVSQFILGTYITEGKGVAQDKEKGLDLLKQSADSQFSYADFNLAVL 771
Query: 108 ---------------YKEGRG---------------VPKDEKKAVEYFRIATEKGYTNAY 137
YK G VP+ +A E ++ +KG A
Sbjct: 772 KQQSGEDFLPNLIESYKLGNSHAGIVLADYYLSQSSVPEQMNQAKEIYKGLADKGDQYAQ 831
Query: 138 INLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAI 197
+ L M +G G + A + + +GN EA LLG Y G EPD + A
Sbjct: 832 LKLAYMLQKGLGAAPDLAGAQHWYTASAEQGNPEAQYLLGQFYQLGETG---EPDYNLAK 888
Query: 198 VYYKMA------ADMSSSRAYEGLAESYQYGL 223
+Y+ A AD++ YE + ++Y L
Sbjct: 889 HWYQKAAKHLSKADVALGFIYETVDDNYAQAL 920
Score = 51.2 bits (121), Expect = 1e-05
Identities = 35/136 (25%), Positives = 65/136 (47%), Gaps = 8/136 (5%)
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
+G +++ G G+ +D+ A+ ++ A E+ + A NLGI+Y++ ++Y +A
Sbjct: 505 IGQLFQYGIGLMQDDASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDYQQALNWLTD 564
Query: 164 AMHKGNVEAYILL------GDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSS--RAYEGL 215
+ KGN A +L G + G + + ++ A++Y A D + E L
Sbjct: 565 SAFKGNKRAQYVLARILRQGIVGPDGKEYIKANDEQAMAMLYLSAANDYGPAEYELAEYL 624
Query: 216 AESYQYGLGVEKDKKK 231
A Y GL V+ K+K
Sbjct: 625 ARDYNNGLSVDVRKQK 640
Score = 46.6 bits (109), Expect = 3e-04
Identities = 28/92 (30%), Positives = 40/92 (43%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
++ A +Y+ A G A + L MY G GV KD K++A +QK L
Sbjct: 1023 DFPDALRYYQDASDKGNEKAMLALARMYHYGLGVEKDHKRSASIYQKLAQKQNAYAQYQL 1082
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
G Y EG + +K E + A+E G A
Sbjct: 1083 GTYYIEGTAGERLPEKGRELLQQASENGSLQA 1114
Score = 42.4 bits (98), Expect = 0.005
Identities = 43/173 (24%), Positives = 63/173 (35%), Gaps = 45/173 (26%)
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGY------------------------------ 133
LG +Y G G K+ + A+ YF + EKGY
Sbjct: 54 LGRLYLYGYGQLKNNRVAMRYFTKSAEKGYLPAVLLMAKYSLLHEKNPEEAARWFKQAAA 113
Query: 134 ---TNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY----YSGNDQ 186
+A + + Y+ G GV N A + A GN A L + + ++GN +
Sbjct: 114 VGDVSAQMYMAAAYLYGVGVKKNTDIARRYYIDAAKNGNPIAQYTLAEYFLESKHAGNKK 173
Query: 187 LGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
LG I++ AA+ +A L Y G V KD K E + KA
Sbjct: 174 LG--------IIWLNKAAENGDPKALTELGRFYVAGQMVAKDTAKGVELLNKA 218
Score = 42.0 bits (97), Expect = 0.006
Identities = 31/96 (32%), Positives = 48/96 (49%), Gaps = 6/96 (6%)
Query: 140 LGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
LG +Y+ G G N A F K+ KG + A +L+ YS L E + ++A +
Sbjct: 54 LGRLYLYGYGQLKNNRVAMRYFTKSAEKGYLPAVLLMAK--YS----LLHEKNPEEAARW 107
Query: 200 YKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
+K AA + A +A +Y YG+GV+K+ A Y
Sbjct: 108 FKQAAAVGDVSAQMYMAAAYLYGVGVKKNTDIARRY 143
>gb|AAL47059.1|AF326610_1 (AF326610) JHP318-like protein [Helicobacter pylori]
Length = 213
Score = 99.8 bits (247), Expect = 3e-20
Identities = 66/213 (30%), Positives = 104/213 (47%), Gaps = 6/213 (2%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G +Y+ +++ +A +++ A LG +Y++ V K+ KAA ++ KA D
Sbjct: 2 GMLSYDKQDFSKARKYFEKACDLKYGGGCGALGDLYDD---VEKNLIKAAYFYSKACDLK 58
Query: 97 IPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
G LG +Y GR V K+ KA ++ A + NLG++Y +G GV N +K
Sbjct: 59 EGMGCKRLGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIK 118
Query: 157 ATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
A + + KA + LG +YY+G G+E D KA Y A ++ S LA
Sbjct: 119 AAQFYSKACELKDGLGCKDLGTLYYNGE---GVEKDLIKAAYLYSKACELKESFGCGALA 175
Query: 217 ESYQYGLGVEKDKKKAEEYMQKACDFDIDKNCK 249
Y G GVEK+ KA++Y+ KAC + C+
Sbjct: 176 VLYINGQGVEKNLIKADQYISKACKLGDQEACE 208
Score = 62.8 bits (151), Expect = 4e-09
Identities = 44/138 (31%), Positives = 62/138 (44%), Gaps = 6/138 (4%)
Query: 116 KDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
+D KA +YF A + Y LG +Y + V N +KA + KA
Sbjct: 9 QDFSKARKYFEKACDLKYGGGCGALGDLYDD---VEKNLIKAAYFYSKACDLKEGMGCKR 65
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
LG +YY G D +E + KA +Y A D+++ L YQ G GVEK+ KA ++
Sbjct: 66 LGSLYYHGRD---VEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIKAAQF 122
Query: 236 MQKACDFDIDKNCKKKNT 253
KAC+ CK T
Sbjct: 123 YSKACELKDGLGCKDLGT 140
>ref|XP_046437.2| (XM_046437) similar to dJ842G6.2 (novel protein imilar to SEL1L
(sel-1 (suppressor of lin-12, C.elegans)-like)) [Homo
sapiens]
Length = 387
Score = 99.0 bits (245), Expect = 4e-20
Identities = 66/185 (35%), Positives = 93/185 (49%), Gaps = 5/185 (2%)
Query: 52 FYKSAIKNGEPLAYVLLGIMYENGR-GVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKE 110
+YK + G+ V LG ++ GR G+ +D KA YF KA +G MY E
Sbjct: 175 YYKFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLE 234
Query: 111 GRG-VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGN 169
G VP++ A +YF +A KG LG++Y G+GVP NY +A + F+KA KG
Sbjct: 235 GNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGW 294
Query: 170 VEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDK 229
+A LG +YYSG+ GI D A Y+ +A+ A LA+ Y G GV +
Sbjct: 295 PDAQFQLGFMYYSGS---GIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSC 351
Query: 230 KKAEE 234
+ A E
Sbjct: 352 RTAVE 356
Score = 83.6 bits (205), Expect = 2e-15
Identities = 47/142 (33%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGY 101
+++Y +A ++ A K G A +G MY E VP++ A +YF A G
Sbjct: 203 DQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGL 262
Query: 102 NNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECF 161
+ LG++Y G+GVP + +A++YF+ A EKG+ +A LG MY G G+ +Y A + F
Sbjct: 263 HGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYF 322
Query: 162 RKAMHKGNVEAYILLGDIYYSG 183
A G A L +Y +G
Sbjct: 323 YLASQSGQPLAIYYLAKMYATG 344
Score = 75.1 bits (183), Expect = 7e-13
Identities = 54/210 (25%), Positives = 97/210 (45%), Gaps = 15/210 (7%)
Query: 45 EYERAAS--FYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
EY++A + +Y G ++ ++LG Y +G V ++ + A Y++K D
Sbjct: 84 EYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALSYYKKVADYIADTFEK 143
Query: 103 NLGVMYKEGRGVPKDEKKA----------VEYFRIATEKGYTNAYINLGIMYMEGR-GVP 151
+ GV ++ R + E + +Y++ E+G ++LG +++ GR G+
Sbjct: 144 SEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIGRKGLD 203
Query: 152 SNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRA 211
+Y KA F KA G+ A +G +Y GN + + A Y+ MAA ++
Sbjct: 204 QDYYKALHYFLKAAKAGSANAMAFIGKMYLEGN--AAVPQNNATAFKYFSMAASKGNAIG 261
Query: 212 YEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
GL Y +G GV + +A +Y QKA +
Sbjct: 262 LHGLGLLYFHGKGVPLNYAEALKYFQKAAE 291
Score = 71.2 bits (173), Expect = 1e-11
Identities = 40/111 (36%), Positives = 57/111 (51%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
A ++ A G + LG++Y +G+GVP + +A +YFQKA + P LG MY
Sbjct: 246 AFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMY 305
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATE 159
G G+ KD K A +YF +A++ G A L MY G GV + A E
Sbjct: 306 YSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVE 356
Score = 50.1 bits (118), Expect = 2e-05
Identities = 29/78 (37%), Positives = 39/78 (49%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y A +++ A + G P A LG MY +G G+ KD K A +YF A + P L
Sbjct: 279 YAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLA 338
Query: 106 VMYKEGRGVPKDEKKAVE 123
MY G GV + + AVE
Sbjct: 339 KMYATGTGVVRSCRTAVE 356
>ref|NP_273467.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||F81200 conserved hypothetical protein NMB0419 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF40857.1| (AE002398) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 198
Score = 96.7 bits (239), Expect = 2e-19
Identities = 58/162 (35%), Positives = 84/162 (51%), Gaps = 4/162 (2%)
Query: 87 EYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYME 146
E Q A + YN LG MY +GRGV +D+ +AV ++R A E+G A NLG MY
Sbjct: 31 ENLQAAAQGNAAAQYN-LGAMYYKGRGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYAN 89
Query: 147 GRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADM 206
GRGV + +A +R+A +G V+A LG IY G G+ D +A+ +++ AA
Sbjct: 90 GRGVRQDDTEAVRWYRQAAAQGVVQAQYNLGVIYAEGR---GVRQDDVEAVRWFRQAAAQ 146
Query: 207 SSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
++A L Y GV +D+ A+E+ KAC C
Sbjct: 147 GVAQAQNNLGVMYAERRGVRQDRALAQEWFGKACQNGDQDGC 188
Score = 95.5 bits (236), Expect = 5e-19
Identities = 53/135 (39%), Positives = 76/135 (56%), Gaps = 2/135 (1%)
Query: 35 YKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVD 94
YKG ++ A +Y+ A + G A LG MY NGRGV +D+ +A ++++A
Sbjct: 52 YKGRGV--RRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANGRGVRQDDTEAVRWYRQAAA 109
Query: 95 NDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNY 154
+ + NLGV+Y EGRGV +D+ +AV +FR A +G A NLG+MY E RGV +
Sbjct: 110 QGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQNNLGVMYAERRGVRQDR 169
Query: 155 VKATECFRKAMHKGN 169
A E F KA G+
Sbjct: 170 ALAQEWFGKACQNGD 184
Score = 94.7 bits (234), Expect = 8e-19
Identities = 53/148 (35%), Positives = 83/148 (55%), Gaps = 3/148 (2%)
Query: 56 AIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVP 115
A G A LG MY GRGV +D+ +A ++++A + + + NLG MY GRGV
Sbjct: 35 AAAQGNAAAQYNLGAMYYKGRGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANGRGVR 94
Query: 116 KDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
+D+ +AV ++R A +G A NLG++Y EGRGV + V+A FR+A +G +A
Sbjct: 95 QDDTEAVRWYRQAAAQGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQNN 154
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMA 203
LG +Y ++ G+ D+ A ++ A
Sbjct: 155 LGVMY---AERRGVRQDRALAQEWFGKA 179
>gb|AAL47058.1|AF326608_1 (AF326608) JHP318-like protein [Helicobacter pylori]
Length = 215
Score = 95.9 bits (237), Expect = 4e-19
Identities = 58/161 (36%), Positives = 85/161 (52%), Gaps = 3/161 (1%)
Query: 80 KDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN 139
+D KA +YF++A + RG NNLGV+Y++G+GV K+ KA +++ A E N
Sbjct: 44 QDFSKARKYFERACGLNNGRGCNNLGVLYRDGQGVEKNLTKAAQFYSKACELKDGGGCGN 103
Query: 140 LGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
LG++Y +G V N KA + + KA + LG +Y G +E + KA
Sbjct: 104 LGVLYQKGEVVEKNLTKAAQFYSKACELKDGGGCGNLGVLYQKGEV---VEKNLTKAAYL 160
Query: 200 YKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKAC 240
Y A ++ S LA Y G GVEKD KA++Y+ KAC
Sbjct: 161 YSKACELKESFGCGALAVLYINGQGVEKDLTKADQYISKAC 201
Score = 86.7 bits (213), Expect = 2e-16
Identities = 59/207 (28%), Positives = 96/207 (45%), Gaps = 5/207 (2%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL + + L AE + G +Y+ +++ +A +++ A LG+
Sbjct: 13 LCLCCVLIGGGLMAE--PNPEELVDLGMLSYDKQDFSKARKYFERACGLNNGRGCNNLGV 70
Query: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
+Y +G+GV K+ KAA+++ KA + G NLGV+Y++G V K+ KA +++ A E
Sbjct: 71 LYRDGQGVEKNLTKAAQFYSKACELKDGGGCGNLGVLYQKGEVVEKNLTKAAQFYSKACE 130
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
NLG++Y +G V N KA + KA L +Y +G G+E
Sbjct: 131 LKDGGGCGNLGVLYQKGEVVEKNLTKAAYLYSKACELKESFGCGALAVLYINGQ---GVE 187
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAE 217
D KA Y A + A E L E
Sbjct: 188 KDLTKADQYISKACKLGDQEARETLKE 214
Score = 57.4 bits (137), Expect = 1e-07
Identities = 40/133 (30%), Positives = 57/133 (42%), Gaps = 3/133 (2%)
Query: 116 KDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
+D KA +YF A NLG++Y +G+GV N KA + + KA +
Sbjct: 44 QDFSKARKYFERACGLNNGRGCNNLGVLYRDGQGVEKNLTKAAQFYSKACELKDGGGCGN 103
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
LG +Y G +E + KA +Y A ++ L YQ G VEK+ KA
Sbjct: 104 LGVLYQKGEV---VEKNLTKAAQFYSKACELKDGGGCGNLGVLYQKGEVVEKNLTKAAYL 160
Query: 236 MQKACDFDIDKNC 248
KAC+ C
Sbjct: 161 YSKACELKESFGC 173
>ref|NP_222869.1| (NC_000921) putative [Helicobacter pylori J99]
pir||F71968 hypothetical protein jhp0148 - Helicobacter pylori (strain J99)
gb|AAD05729.1| (AE001453) putative [Helicobacter pylori J99]
Length = 305
Score = 95.1 bits (235), Expect = 6e-19
Identities = 58/207 (28%), Positives = 96/207 (46%), Gaps = 3/207 (1%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
++ +A +Y+ LA LG MYE+G GV KD KA Y+++
Sbjct: 77 DQNISKAVFYYRRGCNLRNHLACASLGSMYEDGDGVQKDFPKAIYYYRRGCHLKGGVSCG 136
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
+LG MY G GV ++ KA+ + + A Y + +G MY +GV + KA F+
Sbjct: 137 SLGFMYFNGTGVKQNYAKALSFSKYACSLNYGISCNFVGYMYKSAKGVEKDLKKALANFK 196
Query: 163 KAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG 222
+ H + + + LG +Y +G D ++ ++++A+ YK + +A Y G
Sbjct: 197 RGCHLKDGASCVSLGYLYEAGMD---VKQNEEQALNLYKKGCSLKEGSGCHNVAVMYYTG 253
Query: 223 LGVEKDKKKAEEYMQKACDFDIDKNCK 249
G KD +KA Y +K C +CK
Sbjct: 254 KGAPKDLEKATSYYKKGCALGFSGSCK 280
Score = 72.8 bits (177), Expect = 3e-12
Identities = 50/169 (29%), Positives = 85/169 (49%), Gaps = 5/169 (2%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
D +A +++++ + + G +LG MY+ G GV ++ KAV Y+R A +L
Sbjct: 43 DYHRAVAFYKRSCNLRMGVGCTSLGSMYEYGDGVDQNISKAVFYYRRGCNLRNHLACASL 102
Query: 141 GIMYMEGRGVPSNYVKATECFRKAMH-KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
G MY +G GV ++ KA +R+ H KG V LG +Y++G G++ + KA+ +
Sbjct: 103 GSMYEDGDGVQKDFPKAIYYYRRGCHLKGGVSCG-SLGFMYFNGT---GVKQNYAKALSF 158
Query: 200 YKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
K A ++ + + Y+ GVEKD KKA ++ C +C
Sbjct: 159 SKYACSLNYGISCNFVGYMYKSAKGVEKDLKKALANFKRGCHLKDGASC 207
Score = 56.2 bits (134), Expect = 3e-07
Identities = 30/104 (28%), Positives = 55/104 (52%), Gaps = 1/104 (0%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y+YK + K+ ++A + +K + + V LG +YE G V ++E++A ++K
Sbjct: 176 YMYKSAKGVE-KDLKKALANFKRGCHLKDGASCVSLGYLYEAGMDVKQNEEQALNLYKKG 234
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
G +N+ VMY G+G PKD +KA Y++ G++ +
Sbjct: 235 CSLKEGSGCHNVAVMYYTGKGAPKDLEKATSYYKKGCALGFSGS 278
>gb|EAA06387.1| (AAAB01008846) agCP13101 [Anopheles gambiae str. PEST]
Length = 849
Score = 94.4 bits (233), Expect = 1e-18
Identities = 61/210 (29%), Positives = 98/210 (46%), Gaps = 13/210 (6%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR--- 99
N +A +Y A A + LG Y G GVP + A +Y++K +
Sbjct: 276 NVSQAKALLYYTLAAAGENSWAQMALGYRYWAGVGVPNSCETALDYYRKVATKVASQVTF 335
Query: 100 ----GYNNLGVMYKEGRGVPKD---EKKAVEYFRIATEKGYTNAYINLG-IMYMEGRGVP 151
+ + ++ + P + ++Y+++ +KG A + LG + Y GRG+P
Sbjct: 336 SGGAAVHRIRLLDEVDNSGPSSGILDNDLIDYYQLLADKGDVQAQVGLGQLHYQGGRGIP 395
Query: 152 SNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRA 211
++ +A + F +A + GN A LG IY G+D I+ D + A Y+K AAD+ +
Sbjct: 396 LDHQRALQYFSQAANAGNAVAMAFLGKIYLEGSDN--IKADNETAFKYFKKAADLGNPVG 453
Query: 212 YEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
GL Y +G GV KD KA +Y KA D
Sbjct: 454 QSGLGIMYLHGKGVRKDTGKALKYFAKAAD 483
Score = 93.6 bits (231), Expect = 2e-18
Identities = 68/229 (29%), Positives = 102/229 (43%), Gaps = 34/229 (14%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E A ++K A G P+ LGIMY +G+GV KD KA +YF KA D G LG
Sbjct: 436 ETAFKYFKKAADLGNPVGQSGLGIMYLHGKGVRKDTGKALKYFAKAADQGWVDGQLQLGN 495
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY G GV +D K A++YF +A++ G+ A+ NLG M+ G G+ + A E F+
Sbjct: 496 MYYSGIGVQRDFKLAIKYFSLASQSGHVLAFYNLGQMHAIGLGMIRSCPTAVELFKNVAE 555
Query: 167 KG--------------------NVEAYILLGDIYYS-GNDQLGIEPDKD----------- 194
+G + Y LL ++ Y G D++
Sbjct: 556 RGKWADRLMSGYQDYRSYRFEESFMQYALLSEMGYEVAQSNAGFLLDREEVNLFKDRGEE 615
Query: 195 --KAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
+A+ Y+ AA S A L + + YG+G D + A + + A +
Sbjct: 616 LVRALQYWGRAAAQGYSAAQVKLGDYHYYGMGTLIDYEMAASHYRMASE 664
Score = 92.4 bits (228), Expect = 4e-18
Identities = 54/162 (33%), Positives = 86/162 (52%), Gaps = 4/162 (2%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+++RA ++ A G +A LG +Y E + D + A +YF+KA D P G +
Sbjct: 397 DHQRALQYFSQAANAGNAVAMAFLGKIYLEGSDNIKADNETAFKYFKKAADLGNPVGQSG 456
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG+MY G+GV KD KA++YF A ++G+ + + LG MY G GV ++ A + F
Sbjct: 457 LGIMYLHGKGVRKDTGKALKYFAKAADQGWVDGQLQLGNMYYSGIGVQRDFKLAIKYFSL 516
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
A G+V A+ LG ++ G LG+ A+ +K A+
Sbjct: 517 ASQSGHVLAFYNLGQMHAIG---LGMIRSCPTAVELFKNVAE 555
Score = 66.6 bits (161), Expect = 2e-10
Identities = 62/242 (25%), Positives = 103/242 (41%), Gaps = 45/242 (18%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K+ +A ++ A G + LG MY +G GV +D K A +YF A + + N
Sbjct: 469 KDTGKALKYFAKAADQGWVDGQLQLGNMYYSGIGVQRDFKLAIKYFSLASQSGHVLAFYN 528
Query: 104 LGVMYKEGRGVPKDEKKAVEYFR--------------------------------IATEK 131
LG M+ G G+ + AVE F+ + +E
Sbjct: 529 LGQMHAIGLGMIRSCPTAVELFKNVAERGKWADRLMSGYQDYRSYRFEESFMQYALLSEM 588
Query: 132 GYTNAYINLGIM-------YMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGN 184
GY A N G + + RG V+A + + +A +G A + LGD +Y G
Sbjct: 589 GYEVAQSNAGFLLDREEVNLFKDRG--EELVRALQYWGRAAAQGYSAAQVKLGDYHYYG- 645
Query: 185 DQLGIEPDKDKAIVYYKMAAD-MSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFD 243
+G D + A +Y+MA++ ++++A L ++ GLG++KD A+ A D
Sbjct: 646 --MGTLIDYEMAASHYRMASEQQNNAQAMFNLGYMHEQGLGMKKDIHLAKRCYDLAADSS 703
Query: 244 ID 245
+D
Sbjct: 704 VD 705
Score = 66.2 bits (160), Expect = 3e-10
Identities = 56/197 (28%), Positives = 85/197 (42%), Gaps = 14/197 (7%)
Query: 56 AIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVP 115
A G PLA + G VP D + A F + + +P LG MY G G
Sbjct: 217 AAGKGHPLARSHVAWAQLLGNPVPLDIESAKRTFLELAADGLPDAQMGLGFMYSAGIGFN 276
Query: 116 KDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHK-------- 167
+ KA+ Y+ +A + A + LG Y G GVP++ A + +RK K
Sbjct: 277 VSQAKALLYYTLAAAGENSWAQMALGYRYWAGVGVPNSCETALDYYRKVATKVASQVTFS 336
Query: 168 --GNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAE-SYQYGLG 224
V LL ++ SG ++ D I YY++ AD +A GL + YQ G G
Sbjct: 337 GGAAVHRIRLLDEVDNSGPSSGILDND---LIDYYQLLADKGDVQAQVGLGQLHYQGGRG 393
Query: 225 VEKDKKKAEEYMQKACD 241
+ D ++A +Y +A +
Sbjct: 394 IPLDHQRALQYFSQAAN 410
>ref|NP_223289.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71914 hypothetical protein jhp0571 - Helicobacter pylori (strain J99)
gb|AAD06154.1| (AE001490) putative [Helicobacter pylori J99]
Length = 352
Score = 90.5 bits (223), Expect = 2e-17
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 5/205 (2%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKK-AAEYFQKAVDNDIPRGYNNLGV 106
+AA +Y+ G+ A L MYEN + ++K+ A + + A NNLG
Sbjct: 121 KAARYYEMGCSGGDATACANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNNLGW 180
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR--GVPSNYVKATECFRKA 164
M+ G GVPKD KA+ Y++ + E G NLG+M G+ + + A
Sbjct: 181 MFANGSGVPKDYYKAMSYYKFSCENGNDMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLA 240
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+ G++ LG IY +G+ LG + A Y++MA D + L YQ GLG
Sbjct: 241 CNAGDMMGCANLGWIYANGD--LGAPLNNHYAAKYFQMACDGGILGSCNNLGVLYQKGLG 298
Query: 225 VEKDKKKAEEYMQKACDFDIDKNCK 249
V +D ++A + ACD + +C+
Sbjct: 299 VPQDDQRALDLFSYACDNGFESSCR 323
Score = 75.5 bits (184), Expect = 5e-13
Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Query: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
+Y+ ++ ++ + E A Y A + G+ LA LG M+ NG GVPKD KA Y++ +
Sbjct: 144 MYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVPKDYYKAMSYYKFSC 203
Query: 94 DNDIPRGYNNLGVMYKEGR--GVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGV 150
+N G NLG+M G+ K + V+ +A G NLG +Y G G
Sbjct: 204 ENGNDMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGCANLGWIYANGDLGA 263
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD---MS 207
P N A + F+ A G + + LG +Y G LG+ D +A+ + A D S
Sbjct: 264 PLNNHYAAKYFQMACDGGILGSCNNLGVLYQKG---LGVPQDDQRALDLFSYACDNGFES 320
Query: 208 SSRAYEGLAE 217
S R Y E
Sbjct: 321 SCRNYGNFKE 330
>gb|AAM66150.1|AF326629_1 (AF326629) JHP1437-like protein [Helicobacter pylori]
Length = 325
Score = 90.1 bits (222), Expect = 2e-17
Identities = 58/208 (27%), Positives = 91/208 (42%), Gaps = 3/208 (1%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
+N + + A +Y + K +L Y + K +KK EY+ KA + + G
Sbjct: 114 FNVNDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNYGDG 173
Query: 101 YNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
LG +Y G GV KD KKA +Y+ A E Y LG Y G GV + KA
Sbjct: 174 CAILGDIYHNGEGVAKDLKKAFQYYSKACELNNGEGYSKLGGAYFFGEGVTQDLKKAFGY 233
Query: 161 FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQ 220
+ KA L+G+ Y G G+ D KA Y A +++ ++ LA +
Sbjct: 234 YSKACKLNEALTCTLVGEFYRDGE---GVAKDLKKAFEYSAKACELNDAKGCYALAAFFN 290
Query: 221 YGLGVEKDKKKAEEYMQKACDFDIDKNC 248
GV + +K+ E ++K+C + + C
Sbjct: 291 EAKGVARGEKQTTENLEKSCKLGLKETC 318
>gb|AAF01236.1|AF185288_1 (AF185288) immunoreactive protein [Coxiella burnetii]
Length = 469
Score = 89.4 bits (220), Expect = 4e-17
Identities = 60/196 (30%), Positives = 98/196 (49%), Gaps = 6/196 (3%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K+Y +A +Y+ + + G P+A LLG MY GRGV +D KA ++ +K+ +
Sbjct: 247 KDYHKAEEWYQKSAEQGNPIAQYLLGNMYYLGRGVDRDVNKAIDWLKKSAAQNYVPAKVG 306
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG +Y+ + + KK ++ +A++ A NLG+MY G+GV S+ KA ++
Sbjct: 307 LGFIYEMSKHNYPEAKK---WYTLASKFHNPQALYNLGLMYEYGKGVKSDPQKAFRLYKD 363
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGL 223
A G A + + +Y G GI D + A+ Y AA ++S A L + G+
Sbjct: 364 AAQNGLDLAAVQVAGMYLKGT---GIGFDPNTALKMYSQAAQKNNSFATYQLGLMSESGV 420
Query: 224 GVEKDKKKAEEYMQKA 239
+ D KA Y +KA
Sbjct: 421 AQKIDLNKARLYYEKA 436
Score = 87.4 bits (215), Expect = 1e-16
Identities = 60/193 (31%), Positives = 92/193 (47%), Gaps = 6/193 (3%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
++A + Y+ +P A + LG M E+G PKD KA E++QK+ + P LG
Sbjct: 214 KKAVAIYQELANKQDPAAELKLGFMNEHGLLFPKDYHKAEEWYQKSAEQGNPIAQYLLGN 273
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
MY GRGV +D KA+++ + + + Y A + LG +Y + NY +A + + A
Sbjct: 274 MYYLGRGVDRDVNKAIDWLKKSAAQNYVPAKVGLGFIYEMSK---HNYPEAKKWYTLASK 330
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVE 226
N +A LG +Y G G++ D KA YK AA A +A Y G G+
Sbjct: 331 FHNPQALYNLGLMYEYGK---GVKSDPQKAFRLYKDAAQNGLDLAAVQVAGMYLKGTGIG 387
Query: 227 KDKKKAEEYMQKA 239
D A + +A
Sbjct: 388 FDPNTALKMYSQA 400
Score = 77.4 bits (189), Expect = 1e-13
Identities = 54/168 (32%), Positives = 80/168 (47%), Gaps = 6/168 (3%)
Query: 78 VPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAY 137
VP EKKA +Q+ + P LG M + G PKD KA E+++ + E+G A
Sbjct: 209 VPGSEKKAVAIYQELANKQDPAAELKLGFMNEHGLLFPKDYHKAEEWYQKSAEQGNPIAQ 268
Query: 138 INLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAI 197
LG MY GRGV + KA + +K+ + V A + LG IY P+ K
Sbjct: 269 YLLGNMYYLGRGVDRDVNKAIDWLKKSAAQNYVPAKVGLGFIYEMSKHNY---PEAKK-- 323
Query: 198 VYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
+Y +A+ + +A L Y+YG GV+ D +KA + A +D
Sbjct: 324 -WYTLASKFHNPQALYNLGLMYEYGKGVKSDPQKAFRLYKDAAQNGLD 370
Score = 68.9 bits (167), Expect = 5e-11
Identities = 43/135 (31%), Positives = 64/135 (46%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y A +Y A K P A LG+MYE G+GV D +KA ++ A N + +
Sbjct: 318 YPEAKKWYTLASKFHNPQALYNLGLMYEYGKGVKSDPQKAFRLYKDAAQNGLDLAAVQVA 377
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAM 165
MY +G G+ D A++ + A +K + A LG+M G + KA + KA
Sbjct: 378 GMYLKGTGIGFDPNTALKMYSQAAQKNNSFATYQLGLMSESGVAQKIDLNKARLYYEKAA 437
Query: 166 HKGNVEAYILLGDIY 180
+G+VEA + L Y
Sbjct: 438 KEGSVEAQLALARFY 452
Score = 52.0 bits (123), Expect = 6e-06
Identities = 58/231 (25%), Positives = 89/231 (38%), Gaps = 39/231 (16%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+ +++A + Y+ A K+G A V LG Y EK E QKA + P
Sbjct: 37 QNWKKAYALYQKAAKSGLEKADVALGYFYLQQNQTTLAEK-TFEIAQKAYQTNDPEAAML 95
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM------------------ 145
L ++Y G GV ++ +K+ E +++ A LG Y+
Sbjct: 96 LAILYDRGFGVNRNSRKSAEILEKLSKQNNAIAQFMLGNYYLKNKRKENIAISLLEKSAN 155
Query: 146 EGRGV----------PSNYVKATECF-----RKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
+G G + Y K E F R A H ++ +L D Y G E
Sbjct: 156 QGNGYAKYNLAILAKQNKYTKPGENFLSLLIRAANHYDKIKE--ILADYYLLDTPVPGSE 213
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
KA+ Y+ A+ A L ++GL KD KAEE+ QK+ +
Sbjct: 214 ---KKAVAIYQELANKQDPAAELKLGFMNEHGLLFPKDYHKAEEWYQKSAE 261
Score = 45.8 bits (107), Expect = 4e-04
Identities = 31/112 (27%), Positives = 51/112 (44%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
++A YK A +NG LA V + MY G G+ D A + + +A + LG+
Sbjct: 355 QKAFRLYKDAAQNGLDLAAVQVAGMYLKGTGIGFDPNTALKMYSQAAQKNNSFATYQLGL 414
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKAT 158
M + G D KA Y+ A ++G A + L Y + S +V+++
Sbjct: 415 MSESGVAQKIDLNKARLYYEKAAKEGSVEAQLALARFYEFSKTRESGWVESS 466
>ref|NP_206959.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||H64539 conserved hypothetical secreted protein HP0160 - Helicobacter
pylori (strain 26695)
gb|AAD07230.1| (AE000537) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 306
Score = 88.6 bits (218), Expect = 6e-17
Identities = 66/253 (26%), Positives = 104/253 (41%), Gaps = 39/253 (15%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y +A+ +Y +A +FYK + + LG MYE+G GV ++ KA Y+++
Sbjct: 31 YFKMATQAFKRGDYHKAVAFYKRSCNLRVGVGCTSLGSMYEDGDGVDQNITKAVFYYRRG 90
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPS 152
+ +LG MY++G GV K+ KA+ Y+R + +LG MY G GV
Sbjct: 91 CNLRNHLACASLGSMYEDGDGVQKNLPKAIYYYRRGCHLKGGVSCGSLGFMYFNGTGVKQ 150
Query: 153 NYVKA-------------TEC-----------------------FRKAMHKGNVEAYILL 176
NY KA C F++ H + + + L
Sbjct: 151 NYAKALFLSKYACSLNYGISCNFVGYMYRNAKGVQKDLKKALANFKRGCHLKDGASCVSL 210
Query: 177 GDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYM 236
G +Y G D ++ + ++A+ YK + +A Y G GV KD KA Y
Sbjct: 211 GYMYEVGMD---VKQNGEQALNLYKKGCYLKRGSGCHNVAVMYYTGKGVPKDLDKAISYY 267
Query: 237 QKACDFDIDKNCK 249
+K C +CK
Sbjct: 268 KKGCTLGFSGSCK 280
Score = 68.2 bits (165), Expect = 8e-11
Identities = 50/174 (28%), Positives = 78/174 (44%), Gaps = 3/174 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K +A +Y+ ++ LG MY NG GV ++ KA + A + N
Sbjct: 114 KNLPKAIYYYRRGCHLKGGVSCGSLGFMYFNGTGVKQNYAKALFLSKYACSLNYGISCNF 173
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
+G MY+ +GV KD KKA+ F+ + ++LG MY G V N +A ++K
Sbjct: 174 VGYMYRNAKGVQKDLKKALANFKRGCHLKDGASCVSLGYMYEVGMDVKQNGEQALNLYKK 233
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAE 217
+ + +YY+G G+ D DKAI YYK + S + + L E
Sbjct: 234 GCYLKRGSGCHNVAVMYYTGK---GVPKDLDKAISYYKKGCTLGFSGSCKVLEE 284
Score = 56.2 bits (134), Expect = 3e-07
Identities = 38/151 (25%), Positives = 68/151 (44%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+ Y +A K A ++ +G MY N +GV KD KKA F++ +
Sbjct: 150 QNYAKALFLSKYACSLNYGISCNFVGYMYRNAKGVQKDLKKALANFKRGCHLKDGASCVS 209
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG MY+ G V ++ ++A+ ++ + N+ +MY G+GVP + KA ++K
Sbjct: 210 LGYMYEVGMDVKQNGEQALNLYKKGCYLKRGSGCHNVAVMYYTGKGVPKDLDKAISYYKK 269
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKD 194
G + +L ++ +D L + D
Sbjct: 270 GCTLGFSGSCKVLEEVIGKKSDDLQDDAQND 300
>ref|NP_245305.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK02452.1| (AE006073) unknown [Pasteurella multocida]
Length = 242
Score = 88.6 bits (218), Expect = 6e-17
Identities = 49/136 (36%), Positives = 78/136 (57%), Gaps = 6/136 (4%)
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
NLG++Y G+GVP+D +KA +F A EKG A NL + Y++G GV + + F
Sbjct: 93 NLGILYARGQGVPQDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIRHSITLFE 152
Query: 163 KAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG 222
K + G+++A ++LG IY + +Q+ +A +YK AA+ + A LA Y+ G
Sbjct: 153 KTANSGSLDAMLVLGQIYENELNQM------TQAFKWYKKAAEAGNHDAQFRLAVMYENG 206
Query: 223 LGVEKDKKKAEEYMQK 238
G +K+KK+A + QK
Sbjct: 207 EGTKKNKKQAVYWYQK 222
Score = 81.6 bits (200), Expect = 7e-15
Identities = 57/184 (30%), Positives = 91/184 (48%), Gaps = 11/184 (5%)
Query: 20 SALGAEHL--EQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRG 77
SAL A L E +R I EA + KE+ RA G+ A LGI+Y G+G
Sbjct: 47 SALNASELSDEARRELI---REAADKKEWTRAFELILPLALKGDYQAQANLGILYARGQG 103
Query: 78 VPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAY 137
VP+D +KA +F +A + + NNL V Y +G GV +D + ++ F G +A
Sbjct: 104 VPQDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIRHSITLFEKTANSGSLDAM 163
Query: 138 INLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAI 197
+ LG +Y + +A + ++KA GN +A L +Y +G G + +K +A+
Sbjct: 164 LVLGQIY---ENELNQMTQAFKWYKKAAEAGNHDAQFRLAVMYENGE---GTKKNKKQAV 217
Query: 198 VYYK 201
+Y+
Sbjct: 218 YWYQ 221
>gb|AAM66149.1|AF326628_1 (AF326628) JHP1437-like protein [Helicobacter pylori]
Length = 310
Score = 88.2 bits (217), Expect = 8e-17
Identities = 74/275 (26%), Positives = 110/275 (39%), Gaps = 43/275 (15%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL +LCL L AE + I+ G Y +K++ RA +++ A + + +L
Sbjct: 13 LCLVALCL-GGLMAE--SNPKELIFSGITIYTDKDFTRAKEYFEKACRLNDADGCAILRE 69
Query: 71 MYEN-------GRGVPK------------------------------DEKKAAEYFQKAV 93
Y + K D K A EY+ K+
Sbjct: 70 AYSKVILKGSARESIEKALEHTATAKACKSNDAEKCKDLAEFYFNANDLKNALEYYSKSC 129
Query: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSN 153
+ G Y + K +KK +EY+ A E Y + LG +Y G GV N
Sbjct: 130 KLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNYGDGCAILGDIYHNGEGVTQN 189
Query: 154 YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYE 213
+ KA + + KA N E LG Y+ G + D KA YY A +++ +
Sbjct: 190 FKKAFKYYSKACELNNGEGCSKLGGDYFLGES---VTQDLKKAFGYYSKACELNEALTCT 246
Query: 214 GLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
+ E Y+ G GV KD KKA EY KAC+ + K C
Sbjct: 247 LVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGC 281
Score = 64.7 bits (156), Expect = 9e-10
Identities = 49/198 (24%), Positives = 82/198 (40%), Gaps = 3/198 (1%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
+N + + A +Y + K +L Y + K +KK EY+ KA + + G
Sbjct: 113 FNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNYGDG 172
Query: 101 YNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
LG +Y G GV ++ KKA +Y+ A E LG Y G V + KA
Sbjct: 173 CAILGDIYHNGEGVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFLGESVTQDLKKAFGY 232
Query: 161 FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQ 220
+ KA L+G+ Y G G+ D KA Y A +++ ++ LA
Sbjct: 233 YSKACELNEALTCTLVGEFYRDGE---GVTKDLKKAFEYSAKACELNDAKGCYALAAFLM 289
Query: 221 YGLGVEKDKKKAEEYMQK 238
+++ K K + +++
Sbjct: 290 GVKALQRVKSKRPKTLKR 307
>ref|NP_246550.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK03695.1| (AE006198) unknown [Pasteurella multocida]
Length = 172
Score = 87.4 bits (215), Expect = 1e-16
Identities = 46/159 (28%), Positives = 86/159 (53%)
Query: 10 KICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLG 69
K L+ + L S + ++ +G EAY ++ A + S + GE A +G
Sbjct: 6 KTLLSIMLLVSTMNVFAQREEDPVFEQGVEAYKRGDHATAFKLWLSRAEQGEMSAQFNVG 65
Query: 70 IMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIAT 129
MY++G GV +D+++A +++QK+ + + P +LG+MY EG G+ +D K+A +++ +
Sbjct: 66 RMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSA 125
Query: 130 EKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
+G A NLG +Y G G+ ++ +A F++A G
Sbjct: 126 VQGDARALYNLGTLYANGEGIERDWDRAKMYFKQACKAG 164
Score = 70.9 bits (172), Expect = 1e-11
Identities = 34/101 (33%), Positives = 66/101 (64%), Gaps = 3/101 (2%)
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
N+G MY +G GV +D+++A+++++ + E+ + +A +LG+MY EG G+ ++ +A + +
Sbjct: 63 NVGRMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYS 122
Query: 163 KAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMA 203
++ +G+ A LG +Y +G GIE D D+A +Y+K A
Sbjct: 123 QSAVQGDARALYNLGTLYANGE---GIERDWDRAKMYFKQA 160
Score = 65.1 bits (157), Expect = 7e-10
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 108 YKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHK 167
YK G D A + + E+G +A N+G MY +G GV + +A + ++K+ +
Sbjct: 37 YKRG-----DHATAFKLWLSRAEQGEMSAQFNVGRMYDDGDGVEQDKQQALKWYQKSAEQ 91
Query: 168 GNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEK 227
+ +A LG +Y G+ GI D +A +Y +A +RA L Y G G+E+
Sbjct: 92 NHPDAQYHLGLMYSEGD---GIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGIER 148
Query: 228 DKKKAEEYMQKACDFDIDKNC 248
D +A+ Y ++AC + + C
Sbjct: 149 DWDRAKMYFKQACKAGLPEGC 169
>ref|NP_506144.1| (NM_073743) Yeast hypothetical gene L8167.5 like [Caenorhabditis
elegans]
pir||S68303 sel-1 protein - Caenorhabditis elegans
pir||T22223 sel-1 protein - Caenorhabditis elegans
gb|AAC47113.1| (U50829) SEL-1 [Caenorhabditis elegans]
emb|CAB01505.1| (Z78063) predicted using Genefinder~Similarity to Yeast predicted
gene L8167.5 (TR:G544502)~cDNA EST yk53e10.3 comes from
this gene~cDNA EST yk53e10.5 comes from this gene~cDNA
EST yk318c4.5 comes from this gene~cDNA EST yk342b8.3
comes from this gene~>
Length = 685
Score = 87.4 bits (215), Expect = 1e-16
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 52 FYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKE 110
+YK G+ A + LG +Y GRG+ ++ + A Y A ++ LG MY +
Sbjct: 279 YYKMLADKGDTSAQLGLGQIYLAGGRGLNQNFELAFRYLLAAAESGSADALTYLGKMYLD 338
Query: 111 GRG-VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGN 169
G PKD +K+ EY + +K +A LG MYM+G+GV NY KA + + K N
Sbjct: 339 GTPFTPKDYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALKLLTLSADKKN 398
Query: 170 VEAYILLGDIYYSG-NDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD 228
+ + L +++Y G G+ D K++ Y++A+ AY LA+ + G GV +
Sbjct: 399 ADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQMHAAGTGVPRS 458
Query: 229 KKKAEEYMQKACD 241
A + + +
Sbjct: 459 CSHAVDLFKSVAE 471
Score = 80.5 bits (197), Expect = 2e-14
Identities = 58/208 (27%), Positives = 92/208 (43%), Gaps = 16/208 (7%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVM 107
+A +Y + G PLA + +G Y +G GVP++ + A Y+QK + G
Sbjct: 190 KALVYYMFSALGGNPLAQMAMGFRYSHGVGVPQNCETALSYYQKVAKTVVDNVKFTTGQT 249
Query: 108 YKEGR-------------GVPKDEKKAVEYFRIATEKGYTNAYINLGIMYME-GRGVPSN 153
+ R G E +EY+++ +KG T+A + LG +Y+ GRG+ N
Sbjct: 250 IQRLRLTDETDPTIHMQPGSAPLESNLLEYYKMLADKGDTSAQLGLGQIYLAGGRGLNQN 309
Query: 154 YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYE 213
+ A A G+ +A LG +Y G D K+ Y +AD SS A
Sbjct: 310 FELAFRYLLAAAESGSADALTYLGKMYLDGTP--FTPKDYQKSFEYLMKSADKSSPSAQA 367
Query: 214 GLAESYQYGLGVEKDKKKAEEYMQKACD 241
L Y G GV+K+ +KA + + + D
Sbjct: 368 VLGAMYMKGKGVKKNYEKALKLLTLSAD 395
Score = 77.0 bits (188), Expect = 2e-13
Identities = 60/248 (24%), Positives = 107/248 (42%), Gaps = 40/248 (16%)
Query: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
+Y + K+Y+++ + + P A +LG MY G+GV K+ +KA + +
Sbjct: 335 MYLDGTPFTPKDYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALKLLTLSA 394
Query: 94 DNDIPRGYNNLGVMYKEG----RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRG 149
D G L ++ +G +GV +D KK+V+ +++A++ G+ AY NL M+ G G
Sbjct: 395 DKKNADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQMHAAGTG 454
Query: 150 VPSNYVKATECFRKAMHKGN-----VEAYILLGD-------IYYSGNDQLGIE------- 190
VP + A + F+ +G +EA+ D + Y +LG E
Sbjct: 455 VPRSCSHAVDLFKSVAERGKWGERLMEAHSAYKDNRVDEAAMKYLFMAELGYEVAQTNLA 514
Query: 191 -----------------PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAE 233
+ ++A + ++ +A+ + A L + Y YGLG E D A
Sbjct: 515 YILDRGEATSLFSGPKDNNMERAFLNWQRSANQEYAAARVKLGDYYYYGLGTEVDHSLAF 574
Query: 234 EYMQKACD 241
+ A D
Sbjct: 575 SNYKMAVD 582
Score = 41.6 bits (96), Expect = 0.008
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 73 ENGRGVPK--DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVE-YFRIAT 129
++ R +PK E+ AE ++ + + + G+G ++ + A F A
Sbjct: 67 KSNREIPKVISEEYLAEKVEQPPSPEAEAEFQRGMAYIERGKGHGREGRVAAHRVFERAA 126
Query: 130 EKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
+G+ A + M G + +A F G+ +A + LG ++ +G +G+
Sbjct: 127 AQGHQEARKAVAFSQMFGDYSRWSIQEAKTVFEDLEKNGSPDAQLALGFMHGAG---IGV 183
Query: 190 EPDKD-KAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
E KA+VYY +A + A + Y +G+GV ++ + A Y QK +D
Sbjct: 184 EKSNQAKALVYYMFSALGGNPLAQMAMGFRYSHGVGVPQNCETALSYYQKVAKTVVD 240
>gb|AAC47112.1| (U50828) sel-1 gene product [Caenorhabditis elegans]
Length = 685
Score = 87.4 bits (215), Expect = 1e-16
Identities = 56/193 (29%), Positives = 93/193 (48%), Gaps = 3/193 (1%)
Query: 52 FYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKE 110
+YK G+ A + LG +Y GRG+ ++ + A Y A ++ LG MY +
Sbjct: 279 YYKMLADKGDTSAQLGLGQIYLAGGRGLNQNFELAFRYLLAAAESGSADALTYLGKMYLD 338
Query: 111 GRG-VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGN 169
G PKD +K+ EY + +K +A LG MYM+G+GV NY KA + + K N
Sbjct: 339 GTPFTPKDYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALKLLTLSADKKN 398
Query: 170 VEAYILLGDIYYSG-NDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD 228
+ + L +++Y G G+ D K++ Y++A+ AY LA+ + G GV +
Sbjct: 399 ADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQMHAAGTGVPRS 458
Query: 229 KKKAEEYMQKACD 241
A + + +
Sbjct: 459 CSHAVDLFKSVAE 471
Score = 80.5 bits (197), Expect = 2e-14
Identities = 58/208 (27%), Positives = 92/208 (43%), Gaps = 16/208 (7%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVM 107
+A +Y + G PLA + +G Y +G GVP++ + A Y+QK + G
Sbjct: 190 KALVYYMFSALGGNPLAQMAMGFRYSHGVGVPQNCETALSYYQKVAKTVVDNVKFTTGQT 249
Query: 108 YKEGR-------------GVPKDEKKAVEYFRIATEKGYTNAYINLGIMYME-GRGVPSN 153
+ R G E +EY+++ +KG T+A + LG +Y+ GRG+ N
Sbjct: 250 IQRLRLTDETDPTIHMQPGSAPLESNLLEYYKMLADKGDTSAQLGLGQIYLAGGRGLNQN 309
Query: 154 YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYE 213
+ A A G+ +A LG +Y G D K+ Y +AD SS A
Sbjct: 310 FELAFRYLLAAAESGSADALTYLGKMYLDGTP--FTPKDYQKSFEYLMKSADKSSPSAQA 367
Query: 214 GLAESYQYGLGVEKDKKKAEEYMQKACD 241
L Y G GV+K+ +KA + + + D
Sbjct: 368 VLGAMYMKGKGVKKNYEKALKLLTLSAD 395
Score = 77.0 bits (188), Expect = 2e-13
Identities = 60/248 (24%), Positives = 107/248 (42%), Gaps = 40/248 (16%)
Query: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
+Y + K+Y+++ + + P A +LG MY G+GV K+ +KA + +
Sbjct: 335 MYLDGTPFTPKDYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALKLLTLSA 394
Query: 94 DNDIPRGYNNLGVMYKEG----RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRG 149
D G L ++ +G +GV +D KK+V+ +++A++ G+ AY NL M+ G G
Sbjct: 395 DKKNADGQMYLAELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQMHAAGTG 454
Query: 150 VPSNYVKATECFRKAMHKGN-----VEAYILLGD-------IYYSGNDQLGIE------- 190
VP + A + F+ +G +EA+ D + Y +LG E
Sbjct: 455 VPRSCSHAVDLFKSVAERGKWGERLMEAHSAYKDNRVDEAAMKYLFMAELGYEVAQTNLA 514
Query: 191 -----------------PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAE 233
+ ++A + ++ +A+ + A L + Y YGLG E D A
Sbjct: 515 YILDRGEATSLFSGPKDNNMERAFLNWQRSANQEYAAARVKLGDYYYYGLGTEVDHSLAF 574
Query: 234 EYMQKACD 241
+ A D
Sbjct: 575 SNYKMAVD 582
Score = 41.6 bits (96), Expect = 0.008
Identities = 40/177 (22%), Positives = 76/177 (42%), Gaps = 7/177 (3%)
Query: 73 ENGRGVPK--DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVE-YFRIAT 129
++ R +PK E+ AE ++ + + + G+G ++ + A F A
Sbjct: 67 KSNREIPKVISEEYLAEKVEQPPSPEAEAEFQRGMAYIERGKGHGREGRVAAHRVFERAA 126
Query: 130 EKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
+G+ A + M G + +A F G+ +A + LG ++ +G +G+
Sbjct: 127 AQGHQEARKAVAFSQMFGDYSRWSIQEAKTVFEDLEKNGSPDAQLALGFMHGAG---IGV 183
Query: 190 EPDKD-KAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
E KA+VYY +A + A + Y +G+GV ++ + A Y QK +D
Sbjct: 184 EKSNQAKALVYYMFSALGGNPLAQMAMGFRYSHGVGVPQNCETALSYYQKVAKTVVD 240
>ref|NP_286370.1| (NC_002655) ybeQ gene product [Escherichia coli O157:H7 EDL933]
ref|NP_308709.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG54978.1|AE005243_7 (AE005243) ybeQ gene product [Escherichia coli O157:H7 EDL933]
dbj|BAB34105.1| (AP002552) hypothetical protein [Escherichia coli O157:H7]
Length = 195
Score = 87.4 bits (215), Expect = 1e-16
Identities = 52/171 (30%), Positives = 89/171 (51%), Gaps = 3/171 (1%)
Query: 68 LGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRI 127
LG MY NG G +D A ++++A NNL +Y++G+GV ++E A ++
Sbjct: 8 LGWMYRNGNGAAQDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLK 67
Query: 128 ATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL 187
+ ++G +A + Y G GV +Y +A + KA +G+V AY+ +G +Y G
Sbjct: 68 SAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQ--- 124
Query: 188 GIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQK 238
G+E D A ++ AA+ + + A+ LA Y YG G D ++A + +K
Sbjct: 125 GVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRK 175
Score = 81.6 bits (200), Expect = 7e-15
Identities = 47/140 (33%), Positives = 75/140 (53%), Gaps = 3/140 (2%)
Query: 102 NNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECF 161
NNLG MY+ G G +D A +++ A +G+++A NL +Y +G+GV N A +
Sbjct: 6 NNLGWMYRNGNGAAQDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWY 65
Query: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQY 221
K+ +GN A + Y +G G++ D +A+ +Y AA S AY + Y++
Sbjct: 66 LKSAQQGNRHAQFQIAWDYNAGE---GVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKH 122
Query: 222 GLGVEKDKKKAEEYMQKACD 241
G GVEKD + A E+ KA +
Sbjct: 123 GQGVEKDYQAAFEWFTKAAE 142
Score = 77.8 bits (190), Expect = 1e-13
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
++Y A +YK A G A L +YE+G+GV ++E AA ++ K+
Sbjct: 20 QDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQ 79
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
+ Y G GV +D K+A+ ++ A +G AY+N+G MY G+GV +Y A E F K
Sbjct: 80 IAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTK 139
Query: 164 AMHKGNVEAYILLGDIYYSG 183
A + A+ L +Y+ G
Sbjct: 140 AAECNDATAWYNLAIMYHYG 159
Score = 73.9 bits (180), Expect = 2e-12
Identities = 43/120 (35%), Positives = 60/120 (49%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
AA +Y + + G A + Y G GV +D K+A ++ KA Y N+G MY
Sbjct: 61 AAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMY 120
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
K G+GV KD + A E+F A E A+ NL IMY G G P + +A + +RK G
Sbjct: 121 KHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSG 180
Score = 65.5 bits (158), Expect = 5e-10
Identities = 36/110 (32%), Positives = 60/110 (53%), Gaps = 1/110 (0%)
Query: 23 GAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDE 82
G H + + + Y E + ++Y++A +Y A G AYV +G MY++G+GV KD
Sbjct: 72 GNRHAQFQIAWDYNAGEGVD-QDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDY 130
Query: 83 KKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKG 132
+ A E+F KA + + + NL +MY G G P D ++A++ +R G
Sbjct: 131 QAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSG 180
>ref|NP_459646.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL19605.1| (AE008726) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 331
Score = 87.0 bits (214), Expect = 2e-16
Identities = 55/217 (25%), Positives = 108/217 (49%), Gaps = 4/217 (1%)
Query: 23 GAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDE 82
G H ++ +GE +Y +A ++Y+ + LA LG MY +G GV +++
Sbjct: 98 GHRHAFNTLGWVQEGETGMA-PDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQND 156
Query: 83 KKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGI 142
+A +F++A L MY G+G K+ A +++ + + + + +G
Sbjct: 157 TQALYWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGY 216
Query: 143 MYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKM 202
Y G+G+ +Y +A FRKA +G+ +AY +G +Y G+ G+E + A+ ++
Sbjct: 217 CYYIGKGIKQDYQQAIYWFRKAADQGDDDAYNSIGWMYKCGH---GVEQNYSLALEWFHK 273
Query: 203 AADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
+A+ ++S + L Y+ G G +D ++A + +KA
Sbjct: 274 SAECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKA 310
Score = 85.1 bits (209), Expect = 7e-16
Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 3/198 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K+ A + + A + G A+ LG + E G+ D +A +++K + N
Sbjct: 82 KDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYN 141
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG MY G GV +++ +A+ +F+ A +G+ + L MY G+G N A ++K
Sbjct: 142 LGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERLAYMYGNGKGCRKNLSLAALWYKK 201
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGL 223
+ + + + +G YY G GI+ D +AI +++ AAD AY + Y+ G
Sbjct: 202 SALQESSYSQYQMGYCYYIGK---GIKQDYQQAIYWFRKAADQGDDDAYNSIGWMYKCGH 258
Query: 224 GVEKDKKKAEEYMQKACD 241
GVE++ A E+ K+ +
Sbjct: 259 GVEQNYSLALEWFHKSAE 276
Score = 79.7 bits (195), Expect = 3e-14
Identities = 59/231 (25%), Positives = 105/231 (44%), Gaps = 3/231 (1%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+ LA L + G + +Y E ++E + + + + A + G A LG+
Sbjct: 13 VSLAQLTELAQSGNSEAQYILGRLYNDERIDGSEEDKLSFYWLQQAAEQGHCEAQYWLGL 72
Query: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
Y++ KD A + +KA +N LG + + G+ D +AV ++R E
Sbjct: 73 RYKDTPTDMKDNTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAE 132
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
+ + A NLG MY G GV N +A F++A +G+ + L +Y +G G
Sbjct: 133 QSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAALQGHCASQERLAYMYGNGK---GCR 189
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
+ A ++YK +A SS + + Y G G+++D ++A + +KA D
Sbjct: 190 KNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAAD 240
Score = 75.5 bits (184), Expect = 5e-13
Identities = 43/141 (30%), Positives = 72/141 (50%), Gaps = 1/141 (0%)
Query: 28 EQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAE 87
+++ Y+Y G K AA +YK + + +G Y G+G+ +D ++A
Sbjct: 175 QERLAYMY-GNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIGKGIKQDYQQAIY 233
Query: 88 YFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG 147
+F+KA D YN++G MYK G GV ++ A+E+F + E ++ + NLG MY +G
Sbjct: 234 WFRKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKSAECNNSSGWYNLGCMYRDG 293
Query: 148 RGVPSNYVKATECFRKAMHKG 168
G + +A F+KA G
Sbjct: 294 HGTAQDLQQALYWFKKAQPTG 314
Score = 62.8 bits (151), Expect = 4e-09
Identities = 34/103 (33%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
YI KG + ++Y++A +++ A G+ AY +G MY+ G GV ++ A E+F K+
Sbjct: 219 YIGKGIK----QDYQQAIYWFRKAADQGDDDAYNSIGWMYKCGHGVEQNYSLALEWFHKS 274
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTN 135
+ + G+ NLG MY++G G +D ++A+ +F+ A G N
Sbjct: 275 AECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKAQPTGKWN 317
>ref|NP_177498.1| (NM_106015) hypothetical protein [Arabidopsis thaliana]
gb|AAG51809.1|AC079676_4 (AC079676) hypothetical protein; 26401-23451 [Arabidopsis thaliana]
Length = 604
Score = 85.9 bits (211), Expect = 4e-16
Identities = 72/237 (30%), Positives = 107/237 (44%), Gaps = 52/237 (21%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPK-DEKKAAEYFQKAVDNDIPRGYN 102
+++ +A ++ A NG LG +Y G GV K + KA EYF+ A +N+ P G+
Sbjct: 262 RDHAKALYWFSKAEFNG-------LGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHY 314
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
NLGV+Y +G GV KD + A +YF +A G A+ L M+ G G+ N AT ++
Sbjct: 315 NLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYK 374
Query: 163 KAMHKG--------NVEAYILLGD-----IYYSGNDQLGIE------------------- 190
+G +EAY L GD I YS +LG E
Sbjct: 375 LVAERGPWSSLSRWALEAY-LKGDVGKAFILYSRMSELGYEVAQSNAAWIVDKYGERSMC 433
Query: 191 -------PDK---DKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD-KKKAEEYM 236
DK D+A + A++ + A + ++Y YG G E+D + AE YM
Sbjct: 434 MGVYGFCTDKERHDRAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAYM 490
Score = 77.0 bits (188), Expect = 2e-13
Identities = 59/255 (23%), Positives = 106/255 (41%), Gaps = 47/255 (18%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y+Y + + Y +A +++ A N +P + LG++Y G GV KD + A +YF A
Sbjct: 281 YLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVA 340
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGI-MYMEG---- 147
+ P+ + L M+ G G+ K+ + A ++++ E+G ++ + Y++G
Sbjct: 341 ANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYKLVAERGPWSSLSRWALEAYLKGDVGK 400
Query: 148 ---------------------------------RGV------PSNYVKATECFRKAMHKG 168
GV + +A + +A +G
Sbjct: 401 AFILYSRMSELGYEVAQSNAAWIVDKYGERSMCMGVYGFCTDKERHDRAHSLWWRASEQG 460
Query: 169 NVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD 228
N A +L+GD YY G G E D +A Y A S+++A L +++G G+ D
Sbjct: 461 NEHAALLIGDAYYYGR---GTERDFVRAAEAYMYAKSQSNAQAMFNLGYMHEHGEGLPFD 517
Query: 229 KKKAEEYMQKACDFD 243
A+ Y +A D
Sbjct: 518 LHLAKRYYDQALQSD 532
Score = 75.1 bits (183), Expect = 7e-13
Identities = 47/150 (31%), Positives = 81/150 (53%), Gaps = 12/150 (8%)
Query: 58 KNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPK 116
+ G +A +G+ Y G RG+ +D KA +F KA +N LG +Y +G GV K
Sbjct: 239 EKGNSVAMHKIGLFYYFGLRGLRRDHAKALYWFSKA-------EFNGLGYLYVKGYGVDK 291
Query: 117 -DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
+ KA EYF +A + + NLG++Y++G GV + AT+ F A + G +A+
Sbjct: 292 RNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQ 351
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
L ++++G +G+ + + A +YK+ A+
Sbjct: 352 LAKMFHTG---VGLTKNLEMATTFYKLVAE 378
Score = 47.0 bits (110), Expect = 2e-04
Identities = 39/129 (30%), Positives = 62/129 (47%), Gaps = 15/129 (11%)
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATECFRKAMHK 167
++ RG ++ + +EY EKG + A +G+ Y G RG+ ++ KA F KA
Sbjct: 221 RKSRGEEDEDFQILEY---QAEKGNSVAMHKIGLFYYFGLRGLRRDHAKALYWFSKAEFN 277
Query: 168 GNVEAYILLGDIYYSGNDQLGIEP-DKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVE 226
G LG +Y G G++ + KA Y++MAA+ + L Y G GV+
Sbjct: 278 G-------LGYLYVKG---YGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVK 327
Query: 227 KDKKKAEEY 235
KD + A +Y
Sbjct: 328 KDVRHATKY 336
>ref|NP_207422.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||D64598 hypothetical protein HP0628 - Helicobacter pylori (strain 26695)
gb|AAD07699.1| (AE000577) H. pylori predicted coding region HP0628 [Helicobacter
pylori 26695]
Length = 225
Score = 84.3 bits (207), Expect = 1e-15
Identities = 58/193 (30%), Positives = 90/193 (46%), Gaps = 5/193 (2%)
Query: 60 GEPLAYVLLGIMYENGRGVPKDEKK-AAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDE 118
G+ A L MYEN + ++K+ A + + A NNLG M+ G GVPKD
Sbjct: 6 GDATACANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVPKDY 65
Query: 119 KKAVEYFRIATEKGYTNAYINLGIMYMEGR--GVPSNYVKATECFRKAMHKGNVEAYILL 176
KA+ Y++ + E G NLG+M G+ + + A + G++ L
Sbjct: 66 YKAISYYKFSCENGNDMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGCANL 125
Query: 177 GDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYM 236
G IY +G+ LG + A Y++MA D + L YQ GLGV +D ++A +
Sbjct: 126 GWIYANGD--LGAPLNNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGVPQDDQRALDLF 183
Query: 237 QKACDFDIDKNCK 249
ACD + +C+
Sbjct: 184 SYACDNGFESSCR 196
Score = 75.5 bits (184), Expect = 5e-13
Identities = 59/190 (31%), Positives = 88/190 (46%), Gaps = 9/190 (4%)
Query: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
+Y+ ++ ++ + E A Y A + G+ LA LG M+ NG GVPKD KA Y++ +
Sbjct: 17 MYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVPKDYYKAISYYKFSC 76
Query: 94 DNDIPRGYNNLGVMYKEGR--GVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGV 150
+N G NLG+M G+ K + V+ +A G NLG +Y G G
Sbjct: 77 ENGNDMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGCANLGWIYANGDLGA 136
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD---MS 207
P N A + F+ A G + + LG +Y G LG+ D +A+ + A D S
Sbjct: 137 PLNNHYAAKYFQMACDGGILGSCNNLGVLYQKG---LGVPQDDQRALDLFSYACDNGFES 193
Query: 208 SSRAYEGLAE 217
S R Y E
Sbjct: 194 SCRNYGNFKE 203
>emb|CAB65792.2| (AL109657) dJ842G6.2 (novel protein imilar to SEL1L (sel-1
(suppressor of lin-12, C.elegans)-like)) [Homo sapiens]
Length = 505
Score = 84.3 bits (207), Expect = 1e-15
Identities = 51/165 (30%), Positives = 81/165 (48%), Gaps = 4/165 (2%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMY-ENGRGVPKDEKKAAEYFQKAVDNDIPRGY 101
+++Y +A ++ A K G A +G MY E VP++ A +YF A G
Sbjct: 132 DQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGL 191
Query: 102 NNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECF 161
+ LG++Y G+GVP + +A++YF+ A EKG+ +A LG MY G G+ +Y A + F
Sbjct: 192 HGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYF 251
Query: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADM 206
A G A L +Y +G G+ A+ YK ++
Sbjct: 252 YLASQSGQPLAIYYLAKMYATGT---GVVRSCRTAVELYKGVCEL 293
Score = 78.6 bits (192), Expect = 6e-14
Identities = 49/158 (31%), Positives = 74/158 (46%), Gaps = 7/158 (4%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
A ++ A G + LG++Y +G+GVP + +A +YFQKA + P LG MY
Sbjct: 175 AFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMY 234
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
G G+ KD K A +YF +A++ G A L MY G GV + A E ++ G
Sbjct: 235 YSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELG 294
Query: 169 NVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADM 206
+ L Y + D D ++V Y + A+M
Sbjct: 295 HWAEKFLTAYFAYK-------DGDIDSSLVQYALLAEM 325
Score = 75.1 bits (183), Expect = 7e-13
Identities = 54/210 (25%), Positives = 97/210 (45%), Gaps = 15/210 (7%)
Query: 45 EYERAAS--FYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
EY++A + +Y G ++ ++LG Y +G V ++ + A Y++K D
Sbjct: 13 EYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALSYYKKVADYIADTFEK 72
Query: 103 NLGVMYKEGRGVPKDEKKA----------VEYFRIATEKGYTNAYINLGIMYMEGR-GVP 151
+ GV ++ R + E + +Y++ E+G ++LG +++ GR G+
Sbjct: 73 SEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIGRKGLD 132
Query: 152 SNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRA 211
+Y KA F KA G+ A +G +Y GN + + A Y+ MAA ++
Sbjct: 133 QDYYKALHYFLKAAKAGSANAMAFIGKMYLEGN--AAVPQNNATAFKYFSMAASKGNAIG 190
Query: 212 YEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
GL Y +G GV + +A +Y QKA +
Sbjct: 191 LHGLGLLYFHGKGVPLNYAEALKYFQKAAE 220
Score = 70.9 bits (172), Expect = 1e-11
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 40/220 (18%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
Y A +++ A + G P A LG MY +G G+ KD K A +YF A + P L
Sbjct: 208 YAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLA 267
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKG-YTNAYINLGIMYMEG----------------- 147
MY G GV + + AVE ++ E G + ++ Y +G
Sbjct: 268 KMYATGTGVVRSCRTAVELYKGVCELGHWAEKFLTAYFAYKDGDIDSSLVQYALLAEMGY 327
Query: 148 RGVPSN------------------YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
SN Y A + +A +GN A + +GD +Y G G
Sbjct: 328 EVAQSNSAFILESKKANILEKEKMYPMALLLWNRAAIQGNAFARVKIGDYHYYG---YGT 384
Query: 190 EPDKDKAIVYYKMAAD-MSSSRAYEGLAESYQYGLGVEKD 228
+ D A +Y +AA+ +++A LA Y++GLG+ KD
Sbjct: 385 KKDYQTAATHYSIAANKYHNAQAMFNLAYMYEHGLGITKD 424
Score = 67.4 bits (163), Expect = 1e-10
Identities = 61/226 (26%), Positives = 91/226 (39%), Gaps = 59/226 (26%)
Query: 72 YENGRGVPKDEKKAAEYFQKAVDN------DIPRGYN------------NLGVMYKEGR- 112
+E GVP ++ + E + N DI + Y +LG ++ GR
Sbjct: 70 FEKSEGVPVEKVRLTERPENLSSNSEILDWDIYQYYKFLAERGDVQIQVSLGQLHLIGRK 129
Query: 113 GVPKDEKKAVEYFRIATEKGYTNAYI---------------------------------- 138
G+ +D KA+ YF A + G NA
Sbjct: 130 GLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAI 189
Query: 139 ---NLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDK 195
LG++Y G+GVP NY +A + F+KA KG +A LG +YYSG+ GI D
Sbjct: 190 GLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGS---GIWKDYKL 246
Query: 196 AIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
A Y+ +A+ A LA+ Y G GV + + A E + C+
Sbjct: 247 AFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCE 292
>gb|AAM66156.1|AF326634_1 (AF326634) JHP1437-like protein [Helicobacter pylori]
Length = 327
Score = 82.4 bits (202), Expect = 4e-15
Identities = 56/208 (26%), Positives = 89/208 (41%), Gaps = 3/208 (1%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
+N + + A +Y + K +L Y + K +KK EY+ KA + + G
Sbjct: 115 FNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNYGDG 174
Query: 101 YNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
LG +Y G GV ++ KKA +Y+ A E LG Y G V + KA
Sbjct: 175 CAILGDIYHNGEGVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFFGESVTQDLKKAFGY 234
Query: 161 FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQ 220
+ KA L+G+ Y G G+ D KA Y A +++ ++ LA Y
Sbjct: 235 YSKACELNEALTCTLVGEFYRDGE---GVTKDLKKAFEYSAKACELNDAKGCYALAAFYN 291
Query: 221 YGLGVEKDKKKAEEYMQKACDFDIDKNC 248
G GV + +K+ E +K+C + + C
Sbjct: 292 EGKGVARGEKQMTENFEKSCKLGLKEAC 319
Score = 62.8 bits (151), Expect = 4e-09
Identities = 48/141 (34%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 39 EAYNNKE-----YERAASFYKSA--IKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQK 91
+ Y+N E +++A +Y A + NGE + LG Y G V +D KKA Y+ K
Sbjct: 180 DIYHNGEGVTQNFKKAFKYYSKACELNNGEGCSK--LGGDYFFGESVTQDLKKAFGYYSK 237
Query: 92 AVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVP 151
A + + +G Y++G GV KD KKA EY A E L Y EG+GV
Sbjct: 238 ACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYALAAFYNEGKGVA 297
Query: 152 SNYVKATECFRKAMHKGNVEA 172
+ TE F K+ G EA
Sbjct: 298 RGEKQMTENFEKSCKLGLKEA 318
Score = 53.5 bits (127), Expect = 2e-06
Identities = 52/175 (29%), Positives = 81/175 (45%), Gaps = 10/175 (5%)
Query: 80 KDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEG--RGVPKDE-KKAVEYFRIATEKGYTNA 136
KD +A EYF+KA + G L Y + +G K+ +KA+E+ IAT K +
Sbjct: 45 KDFTRAKEYFEKACELHDADGCIILRETYSKVILKGSAKESIEKAIEH--IATAKACKSN 102
Query: 137 YINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL-GIEPDKDK 195
E ++ A E + K+ NVE +L Y ND + G++ DK K
Sbjct: 103 DAEKCKDLAEFYFNANDLKNALEYYSKSCKLNNVEGCMLSATFY---NDMIKGLKKDK-K 158
Query: 196 AIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNCKK 250
+ YY A +++ L + Y G GV ++ KKA +Y KAC+ + + C K
Sbjct: 159 DLEYYSKACELNYGDGCAILGDIYHNGEGVTQNFKKAFKYYSKACELNNGEGCSK 213
>ref|NP_284256.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491]
pir||H81845 hypothetical protein NMA1541 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84768.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491]
Length = 477
Score = 81.6 bits (200), Expect = 7e-15
Identities = 57/204 (27%), Positives = 99/204 (47%), Gaps = 16/204 (7%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
Y ++ +E A + K++ KN P LL G P D + A ++KA +
Sbjct: 128 YASRHFEEALKWAKTSAKNNNPHGQYLLAQYCRYG--TPPDFETAHLLYRKAAAQGLAAA 185
Query: 101 YNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
+ LG+ Y+ G+G D +AV + R A ++GY AY L + + P+ +A
Sbjct: 186 HWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPLAELIL-----PTAPDEAVHW 240
Query: 161 FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEG---LAE 217
F++A + + +A+ L DIY G P+++ + + A ++ R EG L +
Sbjct: 241 FQQAAQENDPDAHAALADIYLQGK-----HPERNYKLALHHAEA-AAAERHPEGLRILGD 294
Query: 218 SYQYGLGVEKDKKKAEEYMQKACD 241
Y+YGLG+ DK+KA Y ++A +
Sbjct: 295 IYRYGLGMTSDKEKALHYYRQAAE 318
Score = 78.2 bits (191), Expect = 8e-14
Identities = 61/224 (27%), Positives = 101/224 (44%), Gaps = 34/224 (15%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
+ A +++ A + +P A+ L +Y G+ ++ K A + + A P G LG
Sbjct: 235 DEAVHWFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERHPEGLRILGD 294
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL-------------GI----------- 142
+Y+ G G+ D++KA+ Y+R A E G AY L GI
Sbjct: 295 IYRYGLGMTSDKEKALHYYRQAAEAGSLAAYQKLISDSALNHPDQYGGIKDSAIRRQRAE 354
Query: 143 -MYMEGRGV------PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDK 195
+Y + + + Y A + + +A G+ +A LG +YY G G+ D ++
Sbjct: 355 RLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFGQ---GMTADYNE 411
Query: 196 AIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
A +++ AA S A LA + G GVE DK+KA Y+Q+A
Sbjct: 412 ARKWFEKAAAQKDSMALYNLACIHYNGHGVEPDKEKACRYLQEA 455
Score = 57.4 bits (137), Expect = 1e-07
Identities = 36/110 (32%), Positives = 51/110 (45%), Gaps = 2/110 (1%)
Query: 24 AEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEK 83
AE L QK ++ G + EY A Y A + G A LG MY G+G+ D
Sbjct: 353 AERLYQKAQALHYGLQCA--PEYAAALKLYTEAAELGHSKAQTNLGSMYYFGQGMTADYN 410
Query: 84 KAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGY 133
+A ++F+KA NL ++ G GV D++KA Y + A GY
Sbjct: 411 EARKWFEKAAAQKDSMALYNLACIHYNGHGVEPDKEKACRYLQEAINNGY 460
>gb|AAM66155.1|AF326633_1 (AF326633) JHP1437-like protein [Helicobacter pylori]
Length = 336
Score = 81.6 bits (200), Expect = 7e-15
Identities = 58/215 (26%), Positives = 93/215 (42%), Gaps = 6/215 (2%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
+N + + A +Y + K +L Y + K +KK EY+ KA + + G
Sbjct: 115 FNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNYGDG 174
Query: 101 YNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
LG +Y G GV ++ KKA +Y+ A E LG Y G V + KA
Sbjct: 175 CAILGDIYHNGEGVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFFGESVTQDLKKAFGY 234
Query: 161 FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQ 220
+ KA L+G+ Y G G+ D KA Y A +++ ++ LA +
Sbjct: 235 YSKACELNEALTCTLVGEFYRDGE---GVTKDLKKAFEYSAKACELNDAKGCYSLAAFFN 291
Query: 221 YGLGVEKDKKKAEEYMQKACDFDIDKNC---KKKN 252
G GV + +K+ E ++K+C + K+ K KN
Sbjct: 292 EGKGVARGEKQMTENLEKSCKLGLKKHAIFSKNKN 326
Score = 58.5 bits (140), Expect = 7e-08
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 9/137 (6%)
Query: 39 EAYNNKE-----YERAASFYKSA--IKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQK 91
+ Y+N E +++A +Y A + NGE + LG Y G V +D KKA Y+ K
Sbjct: 180 DIYHNGEGVTQNFKKAFKYYSKACELNNGEGCSK--LGGDYFFGESVTQDLKKAFGYYSK 237
Query: 92 AVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVP 151
A + + +G Y++G GV KD KKA EY A E +L + EG+GV
Sbjct: 238 ACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYSLAAFFNEGKGVA 297
Query: 152 SNYVKATECFRKAMHKG 168
+ TE K+ G
Sbjct: 298 RGEKQMTENLEKSCKLG 314
Score = 53.5 bits (127), Expect = 2e-06
Identities = 52/175 (29%), Positives = 81/175 (45%), Gaps = 10/175 (5%)
Query: 80 KDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEG--RGVPKDE-KKAVEYFRIATEKGYTNA 136
KD +A EYF+KA + G L Y + +G K+ +KA+E+ IAT K +
Sbjct: 45 KDFTRAKEYFEKACELHDADGCIILRETYSKVILKGSAKESIEKAIEH--IATAKACKSN 102
Query: 137 YINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL-GIEPDKDK 195
E ++ A E + K+ NVE +L Y ND + G++ DK K
Sbjct: 103 DAEKCKDLAEFYFNANDLKNALEYYSKSCKLNNVEGCMLSATFY---NDMIKGLKKDK-K 158
Query: 196 AIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNCKK 250
+ YY A +++ L + Y G GV ++ KKA +Y KAC+ + + C K
Sbjct: 159 DLEYYSKACELNYGDGCAILGDIYHNGEGVTQNFKKAFKYYSKACELNNGEGCSK 213
>ref|NP_274346.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||B81095 conserved hypothetical protein NMB1327 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41702.1| (AE002481) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 467
Score = 80.9 bits (198), Expect = 1e-14
Identities = 54/201 (26%), Positives = 95/201 (46%), Gaps = 10/201 (4%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
Y ++ +E A + K++ KN P LL G P D + A ++K+ +P
Sbjct: 118 YASRHFEEALEWAKTSAKNNNPHGQYLLAQYCRYG--TPPDFETAHLLYRKSAAQGLPEA 175
Query: 101 YNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
+ LG+ Y+ G+G D +AV + R A ++GY AY L + + P+ +A
Sbjct: 176 HWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPLAELIL-----PTAPDEAVHW 230
Query: 161 FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQ 220
F++A + + +A+ L DIY G +E + A+ + + AA L + +
Sbjct: 231 FQQAAQENDPDAHAALADIYLQGKH---LERNHKLALHHAEAAAAERHPEGLRILGDICR 287
Query: 221 YGLGVEKDKKKAEEYMQKACD 241
YGLG+ D +KA Y ++A +
Sbjct: 288 YGLGIAPDTEKARHYYRQAAE 308
Score = 77.0 bits (188), Expect = 2e-13
Identities = 60/224 (26%), Positives = 101/224 (44%), Gaps = 34/224 (15%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
+ A +++ A + +P A+ L +Y G+ + ++ K A + + A P G LG
Sbjct: 225 DEAVHWFQQAAQENDPDAHAALADIYLQGKHLERNHKLALHHAEAAAAERHPEGLRILGD 284
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL-------------GI----------- 142
+ + G G+ D +KA Y+R A E G +AY L GI
Sbjct: 285 ICRYGLGIAPDTEKARHYYRQAAEAGSLSAYQKLISDSALNHPDQYGGIKDSAIRRQRAE 344
Query: 143 -MYMEGRGV------PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDK 195
+Y + + + Y A + + +A G+ +A LG +YY G G+ D ++
Sbjct: 345 RLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFGQ---GMTADYNE 401
Query: 196 AIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
A +++ AA S A+ LA + G GVE DK+KA Y+Q+A
Sbjct: 402 ARKWFEKAAAKKDSMAFYNLACIHYSGHGVEPDKEKACRYLQEA 445
Score = 58.9 bits (141), Expect = 5e-08
Identities = 36/110 (32%), Positives = 52/110 (46%), Gaps = 2/110 (1%)
Query: 24 AEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEK 83
AE L QK ++ G + EY A Y A + G A LG MY G+G+ D
Sbjct: 343 AERLYQKAQALHYGLQCA--PEYAAALKLYTEAAELGHSKAQTNLGSMYYFGQGMTADYN 400
Query: 84 KAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGY 133
+A ++F+KA + NL ++ G GV D++KA Y + A GY
Sbjct: 401 EARKWFEKAAAKKDSMAFYNLACIHYSGHGVEPDKEKACRYLQEAINNGY 450
Score = 45.8 bits (107), Expect = 4e-04
Identities = 40/177 (22%), Positives = 77/177 (42%), Gaps = 16/177 (9%)
Query: 13 LASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI-- 70
L +C + A E+ R+Y + EA + Y++ S SA+ + + +
Sbjct: 282 LGDICRYGLGIAPDTEKARHYYRQAAEAGSLSAYQKLIS--DSALNHPDQYGGIKDSAIR 339
Query: 71 ------MYENGRGVPKDEKKAAEY------FQKAVDNDIPRGYNNLGVMYKEGRGVPKDE 118
+Y+ + + + A EY + +A + + NLG MY G+G+ D
Sbjct: 340 RQRAERLYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFGQGMTADY 399
Query: 119 KKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
+A ++F A K + A+ NL ++ G GV + KA ++A++ G + +L
Sbjct: 400 NEARKWFEKAAAKKDSMAFYNLACIHYSGHGVEPDKEKACRYLQEAINNGYGQKSVL 456
>ref|NP_420846.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK24014.1| (AE005877) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 330
Score = 79.3 bits (194), Expect = 4e-14
Identities = 54/195 (27%), Positives = 94/195 (47%), Gaps = 3/195 (1%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
A Y A + G+P A + +M+ G G+P++ + A ++ ++ + + G GV
Sbjct: 112 AVKLYARAARLGDPNAMFNMAVMHRGGYGLPENPRLARAWYLRSGEAGLAAGAFGAGVAL 171
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
EG G D ++ V + R A E G A LG ++ EG GV S+ KA +R A
Sbjct: 172 LEGYGGRSDARRGVLWLRRAIEMGSAEAMNELGRLHAEGLGVSSDSDKALYFYRAAARNE 231
Query: 169 NVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD 228
+A LG +Y+G + + A+ ++++AAD A+ L + G GV+ D
Sbjct: 232 LPDAMYRLGAAHYNGR---LTDRNYVVAMRWFQLAADRGDYDAWFALGVMCETGRGVKSD 288
Query: 229 KKKAEEYMQKACDFD 243
++ A + ++A D D
Sbjct: 289 RELALQMYRRAADSD 303
Score = 72.8 bits (177), Expect = 3e-12
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 3/160 (1%)
Query: 69 GIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIA 128
G+ G G D ++ + ++A++ N LG ++ EG GV D KA+ ++R A
Sbjct: 168 GVALLEGYGGRSDARRGVLWLRRAIEMGSAEAMNELGRLHAEGLGVSSDSDKALYFYRAA 227
Query: 129 TEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLG 188
+A LG + GR NYV A F+ A +G+ +A+ LG + +G G
Sbjct: 228 ARNELPDAMYRLGAAHYNGRLTDRNYVVAMRWFQLAADRGDYDAWFALGVMCETGR---G 284
Query: 189 IEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKD 228
++ D++ A+ Y+ AAD + + LG+ +D
Sbjct: 285 VKSDRELALQMYRRAADSDQPAVRDKAQRAIDRLLGLAED 324
Score = 69.7 bits (169), Expect = 3e-11
Identities = 51/189 (26%), Positives = 88/189 (45%), Gaps = 4/189 (2%)
Query: 54 KSAIKNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGR 112
+ A+ G+ A V LG +Y G G+ D A + + +A P N+ VM++ G
Sbjct: 80 RKAVALGDTDAMVELGNLYLFGAEGLAVDAPGAVKLYARAARLGDPNAMFNMAVMHRGGY 139
Query: 113 GVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEA 172
G+P++ + A ++ + E G G+ +EG G S+ + R+A+ G+ EA
Sbjct: 140 GLPENPRLARAWYLRSGEAGLAAGAFGAGVALLEGYGGRSDARRGVLWLRRAIEMGSAEA 199
Query: 173 YILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKA 232
LG ++ G LG+ D DKA+ +Y+ AA A L ++ G +++ A
Sbjct: 200 MNELGRLHAEG---LGVSSDSDKALYFYRAAARNELPDAMYRLGAAHYNGRLTDRNYVVA 256
Query: 233 EEYMQKACD 241
+ Q A D
Sbjct: 257 MRWFQLAAD 265
Score = 65.5 bits (158), Expect = 5e-10
Identities = 38/127 (29%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 39 EAYNNK-EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDI 97
E Y + + R + + AI+ G A LG ++ G GV D KA +++ A N++
Sbjct: 173 EGYGGRSDARRGVLWLRRAIEMGSAEAMNELGRLHAEGLGVSSDSDKALYFYRAAARNEL 232
Query: 98 PRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
P LG + GR ++ A+ +F++A ++G +A+ LG+M GRGV S+ A
Sbjct: 233 PDAMYRLGAAHYNGRLTDRNYVVAMRWFQLAADRGDYDAWFALGVMCETGRGVKSDRELA 292
Query: 158 TECFRKA 164
+ +R+A
Sbjct: 293 LQMYRRA 299
Score = 60.1 bits (144), Expect = 2e-08
Identities = 50/185 (27%), Positives = 76/185 (41%), Gaps = 4/185 (2%)
Query: 56 AIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEG-RGV 114
A + G+ YV L I + G G D K + +KAV LG +Y G G+
Sbjct: 46 AAEGGDTSFYVDLAICHIRGEGREPDVAKGLVWLRKAVALGDTDAMVELGNLYLFGAEGL 105
Query: 115 PKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYI 174
D AV+ + A G NA N+ +M+ G G+P N A + ++ G
Sbjct: 106 AVDAPGAVKLYARAARLGDPNAMFNMAVMHRGGYGLPENPRLARAWYLRSGEAGLAAGAF 165
Query: 175 LLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEE 234
G G G D + +++ + A +M S+ A L + GLGV D KA
Sbjct: 166 GAGVALLEG---YGGRSDARRGVLWLRRAIEMGSAEAMNELGRLHAEGLGVSSDSDKALY 222
Query: 235 YMQKA 239
+ + A
Sbjct: 223 FYRAA 227
Score = 50.4 bits (119), Expect = 2e-05
Identities = 29/88 (32%), Positives = 47/88 (52%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
+ + ++A FY++A +N P A LG + NGR ++ A +FQ A D +
Sbjct: 214 SSDSDKALYFYRAAARNELPDAMYRLGAAHYNGRLTDRNYVVAMRWFQLAADRGDYDAWF 273
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATE 130
LGVM + GRGV D + A++ +R A +
Sbjct: 274 ALGVMCETGRGVKSDRELALQMYRRAAD 301
>ref|NP_249051.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||F83599 hypothetical protein PA0360 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG03749.1|AE004474_1 (AE004474) hypothetical protein [Pseudomonas aeruginosa]
Length = 328
Score = 78.2 bits (191), Expect = 8e-14
Identities = 55/191 (28%), Positives = 91/191 (46%), Gaps = 19/191 (9%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G Y + Y A ++ A G A + L ++Y +G G P+D+ +AA +F+KA +
Sbjct: 68 GAYFYQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQDKTEAARWFRKAAEQG 127
Query: 97 IPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM-EGRGVPS--- 152
N +GV+Y G GV +D KA +F A G +A NLG Y+ + +GV S
Sbjct: 128 DAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDAETNLGWFYLDDSQGVYSATS 187
Query: 153 ------------NYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYY 200
+ KA + F KA +G+ A +G+ Y++G+ G +K +A ++
Sbjct: 188 DEEAALLDRYAGSREKAFQWFCKAATQGDARAQFKVGEAYWNGS---GAGMNKLQARLWL 244
Query: 201 KMAADMSSSRA 211
+ AA + A
Sbjct: 245 EKAAQQQDADA 255
Score = 77.0 bits (188), Expect = 2e-13
Identities = 55/199 (27%), Positives = 95/199 (47%), Gaps = 17/199 (8%)
Query: 54 KSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRG 113
+ A + GEP A G + ++ A E++ KA + R L ++Y++G G
Sbjct: 53 RQAAETGEPQALFDFGAYFYQ----QQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDG 108
Query: 114 VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAY 173
P+D+ +A +FR A E+G A +G++Y G GV + VKA F +A G+ +A
Sbjct: 109 GPQDKTEAARWFRKAAEQGDAAAQNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDAE 168
Query: 174 ILLG--------DIYYSGNDQLGIEPDK-----DKAIVYYKMAADMSSSRAYEGLAESYQ 220
LG +Y + +D+ D+ +KA ++ AA +RA + E+Y
Sbjct: 169 TNLGWFYLDDSQGVYSATSDEEAALLDRYAGSREKAFQWFCKAATQGDARAQFKVGEAYW 228
Query: 221 YGLGVEKDKKKAEEYMQKA 239
G G +K +A +++KA
Sbjct: 229 NGSGAGMNKLQARLWLEKA 247
>ref|NP_103302.1| (NC_002678) unknown protein [Mesorhizobium loti]
dbj|BAB49088.1| (AP002998) unknown protein [Mesorhizobium loti]
Length = 716
Score = 77.8 bits (190), Expect = 1e-13
Identities = 52/179 (29%), Positives = 83/179 (46%), Gaps = 3/179 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+ Y A FY+ A A + +G M G G D +A + + +A R +
Sbjct: 445 RRYSWAEHFYELAGNQQYSAALINMGYMARVGMGREIDYGRAFDPYVRAAALGNLRARTD 504
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
+G Y G+GVPK ++ V ++R+A G+ NA LG Y G GV +YV+A +
Sbjct: 505 IGSAYIAGQGVPKLPEEGVLWYRLAASSGWANAITALGDAYRLGTGVKQDYVQAASLYSA 564
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG 222
A G ++A LG Y +G G++ D + + + A DM + A +A+ Y G
Sbjct: 565 AADTGQIDAMANLGQAYLAGE---GVKKDVPRGLELLQRANDMGNRYAPYFMAQLYLKG 620
Score = 74.7 bits (182), Expect = 9e-13
Identities = 52/190 (27%), Positives = 90/190 (47%), Gaps = 4/190 (2%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
+Y RA Y A G A +G Y G+GVPK ++ +++ A + L
Sbjct: 482 DYGRAFDPYVRAAALGNLRARTDIGSAYIAGQGVPKLPEEGVLWYRLAASSGWANAITAL 541
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
G Y+ G GV +D +A + A + G +A NLG Y+ G GV + + E ++A
Sbjct: 542 GDAYRLGTGVKQDYVQAASLYSAAADTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQRA 601
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGL- 223
GN A + +Y G+ +L +P +A+ +++A+ + AY LA ++ G+
Sbjct: 602 NDMGNRYAPYFMAQLYLKGDRKLPADP--RRALALLELSANRGNEYAYVRLAWGHRDGVF 659
Query: 224 -GVEKDKKKA 232
G + D ++A
Sbjct: 660 TGGKPDLRRA 669
Score = 65.1 bits (157), Expect = 7e-10
Identities = 46/157 (29%), Positives = 70/157 (44%), Gaps = 3/157 (1%)
Query: 85 AAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMY 144
A +++ A + N+G M + G G D +A + + A G A ++G Y
Sbjct: 450 AEHFYELAGNQQYSAALINMGYMARVGMGREIDYGRAFDPYVRAAALGNLRARTDIGSAY 509
Query: 145 MEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAA 204
+ G+GVP + +R A G A LGD Y G G++ D +A Y AA
Sbjct: 510 IAGQGVPKLPEEGVLWYRLAASSGWANAITALGDAYRLGT---GVKQDYVQAASLYSAAA 566
Query: 205 DMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
D A L ++Y G GV+KD + E +Q+A D
Sbjct: 567 DTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQRAND 603
>gb|AAG30966.1|AC012396_2 (AC012396) hypothetical protein, 3' partial [Arabidopsis thaliana]
Length = 392
Score = 77.4 bits (189), Expect = 1e-13
Identities = 44/126 (34%), Positives = 67/126 (52%), Gaps = 8/126 (6%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPK-DEKKAAEYFQKAVDNDIPRGYN 102
+++ +A ++ A NG LG +Y G GV K + KA EYF+ A +N+ P G+
Sbjct: 262 RDHAKALYWFSKAEFNG-------LGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHY 314
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFR 162
NLGV+Y +G GV KD + A +YF +A G A+ L M+ G G+ N AT ++
Sbjct: 315 NLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYK 374
Query: 163 KAMHKG 168
+G
Sbjct: 375 LVAERG 380
Score = 75.1 bits (183), Expect = 7e-13
Identities = 47/150 (31%), Positives = 81/150 (53%), Gaps = 12/150 (8%)
Query: 58 KNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPK 116
+ G +A +G+ Y G RG+ +D KA +F KA +N LG +Y +G GV K
Sbjct: 239 EKGNSVAMHKIGLFYYFGLRGLRRDHAKALYWFSKAE-------FNGLGYLYVKGYGVDK 291
Query: 117 -DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
+ KA EYF +A + + NLG++Y++G GV + AT+ F A + G +A+
Sbjct: 292 RNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQ 351
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
L ++++G +G+ + + A +YK+ A+
Sbjct: 352 LAKMFHTG---VGLTKNLEMATTFYKLVAE 378
Score = 62.4 bits (150), Expect = 5e-09
Identities = 28/100 (28%), Positives = 53/100 (53%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y+Y + + Y +A +++ A N +P + LG++Y G GV KD + A +YF A
Sbjct: 281 YLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVA 340
Query: 93 VDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKG 132
+ P+ + L M+ G G+ K+ + A ++++ E+G
Sbjct: 341 ANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYKLVAERG 380
Score = 47.0 bits (110), Expect = 2e-04
Identities = 39/129 (30%), Positives = 62/129 (47%), Gaps = 15/129 (11%)
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATECFRKAMHK 167
++ RG ++ + +EY EKG + A +G+ Y G RG+ ++ KA F KA
Sbjct: 221 RKSRGEEDEDFQILEY---QAEKGNSVAMHKIGLFYYFGLRGLRRDHAKALYWFSKAEFN 277
Query: 168 GNVEAYILLGDIYYSGNDQLGIEP-DKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVE 226
G LG +Y G G++ + KA Y++MAA+ + L Y G GV+
Sbjct: 278 G-------LGYLYVKG---YGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVK 327
Query: 227 KDKKKAEEY 235
KD + A +Y
Sbjct: 328 KDVRHATKY 336
>ref|NP_405544.1| (NC_003143) putative exported protein [Yersinia pestis]
emb|CAC90802.1| (AJ414150) putative exported protein [Yersinia pestis]
Length = 720
Score = 77.0 bits (188), Expect = 2e-13
Identities = 45/136 (33%), Positives = 72/136 (52%), Gaps = 3/136 (2%)
Query: 80 KDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN 139
+D + ++ +K+ D+ + L MY EG GV +D+ K Y A + G ++A +
Sbjct: 581 QDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYLLKAAQLGLSDAQVE 640
Query: 140 LGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
+G +Y+ G GV N +A + KA +GNV A+ LG IY +G+ G E + DKA +
Sbjct: 641 IGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGD---GTEKNLDKAKFH 697
Query: 200 YKMAADMSSSRAYEGL 215
+ +AA AYE L
Sbjct: 698 FTVAAKSGMREAYEEL 713
Score = 69.7 bits (169), Expect = 3e-11
Identities = 43/137 (31%), Positives = 64/137 (46%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G+ Y ++Y+R + + + + A LL MY G GV +D+ K Y KA
Sbjct: 574 GKYHYTCQDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYLLKAAQLG 633
Query: 97 IPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
+ +G +Y G GV K+ +A ++ A E+G +A+ NLG +Y G G N K
Sbjct: 634 LSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGDGTEKNLDK 693
Query: 157 ATECFRKAMHKGNVEAY 173
A F A G EAY
Sbjct: 694 AKFHFTVAAKSGMREAY 710
Score = 47.0 bits (110), Expect = 2e-04
Identities = 29/90 (32%), Positives = 45/90 (49%)
Query: 51 SFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKE 110
S+ A + G A V +G +Y G GV K+ +A ++ KA + + NLG +Y+
Sbjct: 624 SYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQN 683
Query: 111 GRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
G G K+ KA +F +A + G AY L
Sbjct: 684 GDGTEKNLDKAKFHFTVAAKSGMREAYEEL 713
Score = 45.4 bits (106), Expect = 6e-04
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 116 KDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
+D + +++ + + A L MY EG GV + K KA G +A +
Sbjct: 581 QDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYLLKAAQLGLSDAQVE 640
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAE 233
+G +Y G G+E + +A ++ AA+ + A+ L YQ G G EK+ KA+
Sbjct: 641 IGYLYLVGE---GVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGDGTEKNLDKAK 695
>ref|NP_224155.1| (NC_000921) putative [Helicobacter pylori J99]
pir||E71807 hypothetical protein jhp1437 - Helicobacter pylori (strain J99)
gb|AAD07008.1| (AE001566) putative [Helicobacter pylori J99]
Length = 256
Score = 76.3 bits (186), Expect = 3e-13
Identities = 62/254 (24%), Positives = 108/254 (42%), Gaps = 13/254 (5%)
Query: 1 MGYASKLALKI-CLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKN 59
+G K ++ CL +LCL L AE + + I+ G Y +K + RA +++ A K+
Sbjct: 2 LGSVKKAVFRVLCLGALCLCGGLMAE--QDPKELIFSGITIYTDKNFTRAKKYFEKACKS 59
Query: 60 GEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYK-----EGRGV 114
+ +L +Y +G+ + ++ A E +KA+++ L K E
Sbjct: 60 NDADGCAILREVYSSGKAIAREN--ARESIEKALEHTATAKVCKLNDAEKCKDLAEFYFN 117
Query: 115 PKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYI 174
D K A+EY+ + + + Y + K E + KA N
Sbjct: 118 VNDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNNGGGCS 177
Query: 175 LLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEE 234
LG Y+ G G+ D KA Y A +++ ++ LA Y G GV KD+K+ E
Sbjct: 178 KLGGDYFFGE---GVTKDFKKAFEYSAKACELNDAKGCYALAAFYNEGKGVAKDEKQTTE 234
Query: 235 YMQKACDFDIDKNC 248
++K+C + + C
Sbjct: 235 NLEKSCKLGLKEAC 248
Score = 58.2 bits (139), Expect = 9e-08
Identities = 42/136 (30%), Positives = 59/136 (42%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
+N + + A +Y + K +L Y + K +KK EY+ KA + + G
Sbjct: 116 FNVNDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNNGGG 175
Query: 101 YNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
+ LG Y G GV KD KKA EY A E L Y EG+GV + + TE
Sbjct: 176 CSKLGGDYFFGEGVTKDFKKAFEYSAKACELNDAKGCYALAAFYNEGKGVAKDEKQTTEN 235
Query: 161 FRKAMHKGNVEAYILL 176
K+ G EA +L
Sbjct: 236 LEKSCKLGLKEACDIL 251
>ref|XP_003620.2| (XM_003620) similar to hypothetical protein DKFZp761O0113 [Homo
sapiens]
Length = 347
Score = 74.7 bits (182), Expect = 9e-13
Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 79/277 (28%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y +G+ + YE A ++ IK + A LG+MY +G G D +K +Y +K
Sbjct: 62 YFLRGQLYFEEGWYEEALEQFEE-IKEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKI 120
Query: 93 VDNDIPRGYN-------NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN------ 139
+D+ P+ + NLG Y EG+GV + ++A + IA + G A +
Sbjct: 121 LDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLG 180
Query: 140 --------------------------------LGIMYMEGRGVPSNYVKATECFRKAMHK 167
LG+MY+ G+G+ + A +C R+A +
Sbjct: 181 LYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAER 240
Query: 168 GNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD---------------------- 205
GNV A L + YY K + + K AD
Sbjct: 241 GNVYAQGNLVEYYYK-------MKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFIG 293
Query: 206 --MSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKAC 240
M+ + Y A Q GLG+ +D+ A+ Y KAC
Sbjct: 294 RGMAMASFYH--ARCLQLGLGITRDETTAKHYYSKAC 328
>dbj|BAA92563.1| (AB037746) KIAA1325 protein [Homo sapiens]
Length = 354
Score = 74.7 bits (182), Expect = 9e-13
Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 79/277 (28%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y +G+ + YE A ++ IK + A LG+MY +G G D +K +Y +K
Sbjct: 69 YFLRGQLYFEEGWYEEALEQFEE-IKEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKI 127
Query: 93 VDNDIPRGYN-------NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN------ 139
+D+ P+ + NLG Y EG+GV + ++A + IA + G A +
Sbjct: 128 LDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLG 187
Query: 140 --------------------------------LGIMYMEGRGVPSNYVKATECFRKAMHK 167
LG+MY+ G+G+ + A +C R+A +
Sbjct: 188 LYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAER 247
Query: 168 GNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD---------------------- 205
GNV A L + YY K + + K AD
Sbjct: 248 GNVYAQGNLVEYYYK-------MKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFIG 300
Query: 206 --MSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKAC 240
M+ + Y A Q GLG+ +D+ A+ Y KAC
Sbjct: 301 RGMAMASFYH--ARCLQLGLGITRDETTAKHYYSKAC 335
>ref|NP_060879.1| (NM_018409) hypothetical protein DKFZp761O0113 [Homo sapiens]
pir||T47138 hypothetical protein DKFZp761O0113.1 - human
emb|CAB82313.1| (AL161975) hypothetical protein [Homo sapiens]
Length = 321
Score = 74.7 bits (182), Expect = 9e-13
Identities = 67/277 (24%), Positives = 106/277 (38%), Gaps = 79/277 (28%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y +G+ + YE A ++ IK + A LG+MY +G G D +K +Y +K
Sbjct: 36 YFLRGQLYFEEGWYEEALEQFEE-IKEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKI 94
Query: 93 VDNDIPRGYN-------NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN------ 139
+D+ P+ + NLG Y EG+GV + ++A + IA + G A +
Sbjct: 95 LDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLG 154
Query: 140 --------------------------------LGIMYMEGRGVPSNYVKATECFRKAMHK 167
LG+MY+ G+G+ + A +C R+A +
Sbjct: 155 LYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAER 214
Query: 168 GNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD---------------------- 205
GNV A L + YY K + + K AD
Sbjct: 215 GNVYAQGNLVEYYYK-------MKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFIG 267
Query: 206 --MSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKAC 240
M+ + Y A Q GLG+ +D+ A+ Y KAC
Sbjct: 268 RGMAMASFYH--ARCLQLGLGITRDETTAKHYYSKAC 302
>ref|NP_102363.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB48149.1| (AP002995) hypothetical protein [Mesorhizobium loti]
Length = 577
Score = 73.6 bits (179), Expect = 2e-12
Identities = 47/164 (28%), Positives = 78/164 (46%), Gaps = 5/164 (3%)
Query: 76 RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTN 135
RG ++ + AE ++A D +P L V+ + G GV +D A + ++ A EKG +
Sbjct: 185 RGKRENRVRIAEEVRRAADAGLPTATYLLAVLTEHGLGVARDMAAAAQLYQAAAEKGLPS 244
Query: 136 AYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDK 195
A LG+ ++G V + R+A GN+EA LLGD + PD +
Sbjct: 245 AQFRLGLALIDGALVGQDVAAGEAWMRRAALAGNIEAAYLLGDRHAKTQ-----RPDFAE 299
Query: 196 AIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
A +Y+ AA+ A LA Y G GV +D ++ +++ +
Sbjct: 300 AANWYRRAAEAGHQAAARALASLYLTGNGVAEDVEEGARWLRSS 343
Score = 67.4 bits (163), Expect = 1e-10
Identities = 50/195 (25%), Positives = 85/195 (42%), Gaps = 4/195 (2%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
++ AA++Y+ A + G A L +Y G GV +D ++ A + + + + +L
Sbjct: 296 DFAEAANWYRRAAEAGHQAAARALASLYLTGNGVAEDVEEGARWLRSSASAGNQQAQTDL 355
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
+ G G P D +F A G A NLG+ + +G GV + +A R+A
Sbjct: 356 ANLILGGAGEPDDGASVAGWFEAAASSGDLIAAFNLGLCFAKGVGVRQDEGQAAHWLRRA 415
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G EA + + G G+ D +A V++ AAD A LAE G G
Sbjct: 416 A-EGVAEAQYMYARLLQDGR---GVAADPTQARVWFARAADAGVLDARVALAEMLLNGRG 471
Query: 225 VEKDKKKAEEYMQKA 239
+ + A + ++A
Sbjct: 472 GMPEPEAAMQLFEQA 486
Score = 65.9 bits (159), Expect = 4e-10
Identities = 50/196 (25%), Positives = 89/196 (44%), Gaps = 4/196 (2%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
++ E A + +S+ G A L + G G P D A +F+ A + N
Sbjct: 331 EDVEEGARWLRSSASAGNQQAQTDLANLILGGAGEPDDGASVAGWFEAAASSGDLIAAFN 390
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
LG+ + +G GV +DE +A + R A E G A + +GRGV ++ +A F +
Sbjct: 391 LGLCFAKGVGVRQDEGQAAHWLRRAAE-GVAEAQYMYARLLQDGRGVAADPTQARVWFAR 449
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGL 223
A G ++A + L ++ +G G P+ + A+ ++ AA + A + Y G
Sbjct: 450 AADAGVLDARVALAEMLLNGR---GGMPEPEAAMQLFEQAAADGHAGAMFAIGALYGAGH 506
Query: 224 GVEKDKKKAEEYMQKA 239
G+ D+ A+++ A
Sbjct: 507 GLPLDQTTAQKWYAAA 522
Score = 62.0 bits (149), Expect = 6e-09
Identities = 53/229 (23%), Positives = 92/229 (40%), Gaps = 39/229 (17%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVM 107
R A + A G P A LL ++ E+G GV +D AA+ +Q A + +P LG+
Sbjct: 193 RIAEEVRRAADAGLPTATYLLAVLTEHGLGVARDMAAAAQLYQAAAEKGLPSAQFRLGLA 252
Query: 108 YKEGRGVPKDE----------------------------------KKAVEYFRIATEKGY 133
+G V +D +A ++R A E G+
Sbjct: 253 LIDGALVGQDVAAGEAWMRRAALAGNIEAAYLLGDRHAKTQRPDFAEAANWYRRAAEAGH 312
Query: 134 TNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDK 193
A L +Y+ G GV + + R + GN +A L ++ G EPD
Sbjct: 313 QAAARALASLYLTGNGVAEDVEEGARWLRSSASAGNQQAQTDLANLILGGAG----EPDD 368
Query: 194 DKAIV-YYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
++ +++ AA A L + G+GV +D+ +A ++++A +
Sbjct: 369 GASVAGWFEAAASSGDLIAAFNLGLCFAKGVGVRQDEGQAAHWLRRAAE 417
Score = 57.8 bits (138), Expect = 1e-07
Identities = 44/172 (25%), Positives = 75/172 (43%), Gaps = 3/172 (1%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
++ E A+ + G A + + ++GRGV D +A +F +A D +
Sbjct: 402 RQDEGQAAHWLRRAAEGVAEAQYMYARLLQDGRGVAADPTQARVWFARAADAGVLDARVA 461
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRK 163
L M GRG + + A++ F A G+ A +G +Y G G+P + A + +
Sbjct: 462 LAEMLLNGRGGMPEPEAAMQLFEQAAADGHAGAMFAIGALYGAGHGLPLDQTTAQKWYAA 521
Query: 164 AMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGL 215
A +G+ +A +LG G L E D A ++ + AA S A + L
Sbjct: 522 AAGRGHSQAQFMLGRYLLKG---LAGERDPVAARLWLERAAAHGISEAADEL 570
Score = 45.8 bits (107), Expect = 4e-04
Identities = 35/130 (26%), Positives = 58/130 (43%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVM 107
+A ++ A G A V L M NGRG + + A + F++A + +G +
Sbjct: 442 QARVWFARAADAGVLDARVALAEMLLNGRGGMPEPEAAMQLFEQAAADGHAGAMFAIGAL 501
Query: 108 YKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHK 167
Y G G+P D+ A +++ A +G++ A LG ++G + V A +A
Sbjct: 502 YGAGHGLPLDQTTAQKWYAAAAGRGHSQAQFMLGRYLLKGLAGERDPVAARLWLERAAAH 561
Query: 168 GNVEAYILLG 177
G EA LG
Sbjct: 562 GISEAADELG 571
>ref|NP_518145.1| (NC_003295) PUTATIVE SIGNAL PEPTIDE PROTEIN [Ralstonia
solanacearum]
emb|CAD13552.1| (AL646057) PUTATIVE SIGNAL PEPTIDE PROTEIN [Ralstonia solanacearum]
Length = 252
Score = 72.8 bits (177), Expect = 3e-12
Identities = 46/177 (25%), Positives = 80/177 (44%), Gaps = 1/177 (0%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
Y + E+ RA + A + G LA +M G G + A ++ ++A DN +
Sbjct: 56 YEHNEFGRAIDEFAEAAQRGNRLAQFNYAMMLMRGEGTVAQPEAAVKWLRRAADNQMTHA 115
Query: 101 YNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
G +++ G VP+ +A +++ A G+ A L Y GRGVP +Y +A
Sbjct: 116 QFAYGELFERGELVPRSLPEANKWYERAAAGGHIEAQRALATNYFTGRGVPRDYGRAFTW 175
Query: 161 FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAE 217
++KA G+ + ++G Y G + + D ++A ++Y AA A L E
Sbjct: 176 YKKAAEAGDGPSQYIVGSYYERGEPGV-VAQDIEQAKLWYGRAAAQGDPGALAKLRE 231
>ref|XP_132104.1| (XM_132104) similar to Sel-1 homolog precursor (Suppressor of
lin-12-like protein) (Sel-1L) [Mus musculus]
Length = 253
Score = 72.8 bits (177), Expect = 3e-12
Identities = 54/166 (32%), Positives = 83/166 (49%), Gaps = 8/166 (4%)
Query: 44 KEYERAASFY-KSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
K E A +Y K A++ +P I+ G+GV K+ + A E +KA + + N
Sbjct: 11 KNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVN 70
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG--RGVPS-NYVKATE 159
LG Y + R K+ KA +Y+ A E G +A NLG++Y++G GVP N A E
Sbjct: 71 GLGWYYHKFR---KNYAKAAKYWLKAEEMGNPDASYNLGVLYLDGIFPGVPGRNLTLAGE 127
Query: 160 CFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
F KA G++E + Y +GN + D +KA+V+ K A+
Sbjct: 128 YFHKAAQGGHIEGTLWCSLYYITGNLET-FPRDPEKAVVWAKHVAE 172
>gb|AAH30908.1| (BC030908) Unknown (protein for IMAGE:4504268) [Mus musculus]
Length = 292
Score = 71.2 bits (173), Expect = 1e-11
Identities = 63/268 (23%), Positives = 105/268 (38%), Gaps = 61/268 (22%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y +G+ + YE A + ++ I+ + A LG+MY +G G + +K Y +K
Sbjct: 7 YFLRGQLYFEEGWYEEALAQFEE-IQEKDHQAIYQLGVMYYDGLGTIANAEKGVNYMRKI 65
Query: 93 VDNDIPRGYN-------NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN------ 139
+D+ P+ + NLG Y EG+GV + +++A + +A + G A +
Sbjct: 66 LDSSCPQTMHLKFAAAYNLGRAYFEGKGVKRSDEEAERLWLLAADNGNPKASVKAQSILG 125
Query: 140 --------------------------------LGIMYMEGRGVPSNYVKATECFRKAMHK 167
LG+MY G+G+ + A C R+A +
Sbjct: 126 LFYSMKEPKELEKAFFWHSEACGNGSLESQGALGLMYFYGQGIRQDTDAALHCLREAAER 185
Query: 168 GNVEAYILLGDIYYS--------GNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA--- 216
GNV A L + YY + + D+ I D +G+A
Sbjct: 186 GNVYAQGTLVEYYYKMKFFTKCVSFSKRIADYDEVHDIPMIAHVTDCLPEFIIKGMAMAA 245
Query: 217 ----ESYQYGLGVEKDKKKAEEYMQKAC 240
Q GLG+ KD++ A+ Y KAC
Sbjct: 246 FYHGRCLQLGLGIMKDEESAKHYYSKAC 273
>ref|XP_134130.1| (XM_134130) similar to Ank repeat containing protein~data
source:Pfam, source key:PF00023, evidence:ISS~putative
[Mus musculus]
Length = 367
Score = 71.2 bits (173), Expect = 1e-11
Identities = 63/268 (23%), Positives = 105/268 (38%), Gaps = 61/268 (22%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y +G+ + YE A + ++ I+ + A LG+MY +G G + +K Y +K
Sbjct: 82 YFLRGQLYFEEGWYEEALAQFEE-IQEKDHQAIYQLGVMYYDGLGTIANAEKGVNYMRKI 140
Query: 93 VDNDIPRGYN-------NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN------ 139
+D+ P+ + NLG Y EG+GV + +++A + +A + G A +
Sbjct: 141 LDSSCPQTMHLKFAAAYNLGRAYFEGKGVKRSDEEAERLWLLAADNGNPKASVKAQSILG 200
Query: 140 --------------------------------LGIMYMEGRGVPSNYVKATECFRKAMHK 167
LG+MY G+G+ + A C R+A +
Sbjct: 201 LFYSMKEPKELEKAFFWHSEACGNGSLESQGALGLMYFYGQGIRQDTDAALHCLREAAER 260
Query: 168 GNVEAYILLGDIYYS--------GNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA--- 216
GNV A L + YY + + D+ I D +G+A
Sbjct: 261 GNVYAQGTLVEYYYKMKFFTKCVSFSKRIADYDEVHDIPMIAHVTDCLPEFIIKGMAMAA 320
Query: 217 ----ESYQYGLGVEKDKKKAEEYMQKAC 240
Q GLG+ KD++ A+ Y KAC
Sbjct: 321 FYHGRCLQLGLGIMKDEESAKHYYSKAC 348
>ref|NP_080554.1| (NM_026278) RIKEN cDNA 2310006J04 [Mus musculus]
dbj|BAB30345.1| (AK016626) Ank repeat containing protein~data source:Pfam, source
key:PF00023, evidence:ISS~putative [Mus musculus]
Length = 346
Score = 71.2 bits (173), Expect = 1e-11
Identities = 63/268 (23%), Positives = 105/268 (38%), Gaps = 61/268 (22%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKA 92
Y +G+ + YE A + ++ I+ + A LG+MY +G G + +K Y +K
Sbjct: 61 YFLRGQLYFEEGWYEEALAQFEE-IQEKDHQAIYQLGVMYYDGLGTIANAEKGVNYMRKI 119
Query: 93 VDNDIPRGYN-------NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN------ 139
+D+ P+ + NLG Y EG+GV + +++A + +A + G A +
Sbjct: 120 LDSSCPQTMHLKFAAAYNLGRAYFEGKGVKRSDEEAERLWLLAADNGNPKASVKAQSILG 179
Query: 140 --------------------------------LGIMYMEGRGVPSNYVKATECFRKAMHK 167
LG+MY G+G+ + A C R+A +
Sbjct: 180 LFYSMKEPKELEKAFFWHSEACGNGSLESQGALGLMYFYGQGIRQDTDAALHCLREAAER 239
Query: 168 GNVEAYILLGDIYYS--------GNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA--- 216
GNV A L + YY + + D+ I D +G+A
Sbjct: 240 GNVYAQGTLVEYYYKMKFFTKCVSFSKRIADYDEVHDIPMIAHVTDCLPEFIIKGMAMAA 299
Query: 217 ----ESYQYGLGVEKDKKKAEEYMQKAC 240
Q GLG+ KD++ A+ Y KAC
Sbjct: 300 FYHGRCLQLGLGIMKDEESAKHYYSKAC 327
>gb|AAH26655.1| (BC026655) Similar to KIAA0746 protein [Mus musculus]
Length = 426
Score = 71.2 bits (173), Expect = 1e-11
Identities = 50/157 (31%), Positives = 79/157 (49%), Gaps = 7/157 (4%)
Query: 52 FYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEG 111
+ K A++ +P I+ G+GV K+ + A E +KA + + N LG Y +
Sbjct: 11 YAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHKF 70
Query: 112 RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG--RGVPS-NYVKATECFRKAMHKG 168
R K+ KA +Y+ A E G +A NLG++Y++G GVP N A E F KA G
Sbjct: 71 R---KNYAKAAKYWLKAEEMGNPDASYNLGVLYLDGIFPGVPGRNLTLAGEYFHKAAQGG 127
Query: 169 NVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
++E + Y +GN + D +KA+V+ K A+
Sbjct: 128 HIEGTLWCSLYYITGNLET-FPRDPEKAVVWAKHVAE 163
Score = 45.4 bits (106), Expect = 6e-04
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 7/111 (6%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENG--RGVP-KDEKKAAEYFQKAVDNDIPRG 100
K Y +AA ++ A + G P A LG++Y +G GVP ++ A EYF KA G
Sbjct: 72 KNYAKAAKYWLKAEEMGNPDASYNLGVLYLDGIFPGVPGRNLTLAGEYFHKAAQGGHIEG 131
Query: 101 YNNLGVMYKEG--RGVPKDEKKAVEYFR-IATEKGYTNAYINLGI-MYMEG 147
+ Y G P+D +KAV + + +A + GY I G+ Y+EG
Sbjct: 132 TLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEG 182
>ref|NP_455035.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD08897.1| (AL627266) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 384
Score = 70.5 bits (171), Expect = 2e-11
Identities = 50/134 (37%), Positives = 73/134 (54%), Gaps = 7/134 (5%)
Query: 104 LGVMYKEGRGVPKDEKKA--VEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATEC 160
+G +Y G V D+K+A +++FR A E G +A LG Y+ G RG+ + K +
Sbjct: 98 VGSLYDSGF-VEVDDKEARSLQWFRKAAELGQADAQNILGYFYLNGKRGIKRDLQKGGQW 156
Query: 161 FRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQ 220
+ A +GNV+A I LG+IYYSG + D +A +++ AA M SRA LA Y
Sbjct: 157 YELAAAQGNVDALINLGEIYYSGTR---VPLDYARAFEFFERAAKMGKSRALNYLAWMYT 213
Query: 221 YGLGVEKDKKKAEE 234
G V+ D +KA E
Sbjct: 214 NGQFVDTDCRKAAE 227
Score = 65.1 bits (157), Expect = 7e-10
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 4/126 (3%)
Query: 61 EPLAYVLLGIMYENGRGVPKDEKKAA--EYFQKAVDNDIPRGYNNLGVMYKEG-RGVPKD 117
+P ++G +Y++G V D+K+A ++F+KA + N LG Y G RG+ +D
Sbjct: 91 DPELNFIVGSLYDSGF-VEVDDKEARSLQWFRKAAELGQADAQNILGYFYLNGKRGIKRD 149
Query: 118 EKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLG 177
+K +++ +A +G +A INLG +Y G VP +Y +A E F +A G A L
Sbjct: 150 LQKGGQWYELAAAQGNVDALINLGEIYYSGTRVPLDYARAFEFFERAAKMGKSRALNYLA 209
Query: 178 DIYYSG 183
+Y +G
Sbjct: 210 WMYTNG 215
Score = 60.8 bits (146), Expect = 1e-08
Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 7/154 (4%)
Query: 14 ASLCLFSALGAEHLEQKRNYIY-----KGEEAYNNKEYERAASFYKSAIKNGEPLAYVLL 68
A + + L A+ + + N+I G ++KE R+ +++ A + G+ A +L
Sbjct: 77 ADILHLAELWAQERDPELNFIVGSLYDSGFVEVDDKE-ARSLQWFRKAAELGQADAQNIL 135
Query: 69 GIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRI 127
G Y NG RG+ +D +K ++++ A NLG +Y G VP D +A E+F
Sbjct: 136 GYFYLNGKRGIKRDLQKGGQWYELAAAQGNVDALINLGEIYYSGTRVPLDYARAFEFFER 195
Query: 128 ATEKGYTNAYINLGIMYMEGRGVPSNYVKATECF 161
A + G + A L MY G+ V ++ KA E F
Sbjct: 196 AAKMGKSRALNYLAWMYTNGQFVDTDCRKAAELF 229
>gb|AAL47060.1|AF326611_1 (AF326611) JHP318-like protein [Helicobacter pylori]
Length = 131
Score = 69.7 bits (169), Expect = 3e-11
Identities = 42/128 (32%), Positives = 64/128 (49%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G ++ K++ +A +++ A LG +YEN +GV K+ K A ++ KA D +
Sbjct: 2 GVKSNKAKDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDLN 61
Query: 97 IPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
G NLG +Y+ G GV KD KA +Y A + + LG +Y G+GV N K
Sbjct: 62 NGVGCKNLGFLYEYGEGVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTK 121
Query: 157 ATECFRKA 164
A + KA
Sbjct: 122 AAYFYSKA 129
Score = 68.2 bits (165), Expect = 8e-11
Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 3/126 (2%)
Query: 80 KDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN 139
KD +A +YF+KA + + RG +LG +Y+ +GV K+ K ++ A + N
Sbjct: 9 KDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDLNNGVGCKN 68
Query: 140 LGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
LG +Y G GV + +KAT+ KA N +LG +Y SG G+E + KA +
Sbjct: 69 LGFLYEYGEGVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGK---GVEKNLTKAAYF 125
Query: 200 YKMAAD 205
Y A D
Sbjct: 126 YSKACD 131
Score = 60.5 bits (145), Expect = 2e-08
Identities = 42/126 (33%), Positives = 56/126 (44%), Gaps = 3/126 (2%)
Query: 116 KDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
KD +A +YF A Y +LG +Y +GV N K + KA N
Sbjct: 9 KDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDLNNGVGCKN 68
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
LG +Y G G+E D KA Y A D+++ + L Y G GVEK+ KA +
Sbjct: 69 LGFLYEYGE---GVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTKAAYF 125
Query: 236 MQKACD 241
KACD
Sbjct: 126 YSKACD 131
Score = 59.7 bits (143), Expect = 3e-08
Identities = 38/104 (36%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 149 GVPSN----YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAA 204
GV SN + +A + F KA + LGD+Y NDQ G+E + K +Y A
Sbjct: 2 GVKSNKAKDFTQAKKYFEKACNLNYGRGCGSLGDLYE--NDQ-GVEKNLTKVAYFYSKAC 58
Query: 205 DMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
D+++ + L Y+YG GVEKD KA +Y KACD + C
Sbjct: 59 DLNNGVGCKNLGFLYEYGEGVEKDLIKATQYASKACDLNNGSGC 102
Score = 53.5 bits (127), Expect = 2e-06
Identities = 32/97 (32%), Positives = 48/97 (48%), Gaps = 1/97 (1%)
Query: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
+Y+ ++ K + A FY A + LG +YE G GV KD KA +Y KA
Sbjct: 36 LYENDQGVE-KNLTKVAYFYSKACDLNNGVGCKNLGFLYEYGEGVEKDLIKATQYASKAC 94
Query: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
D + G + LG +Y G+GV K+ KA ++ A +
Sbjct: 95 DLNNGSGCDVLGFLYGSGKGVEKNLTKAAYFYSKACD 131
>ref|NP_638122.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM42046.1| (AE012390) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 252
Score = 69.3 bits (168), Expect = 4e-11
Identities = 51/192 (26%), Positives = 86/192 (44%), Gaps = 7/192 (3%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVM 107
+A + + A + A +LL +Y GRGV D +A +++ A + P N LG
Sbjct: 21 QAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAMLWYEVAANAGHPEAMNQLGRC 80
Query: 108 YKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHK 167
++ G G P + + A +FR A G NL +Y GRGV ++ +A +R+A
Sbjct: 81 HELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASGRGVAQDHTQALALYRRAAEH 140
Query: 168 GNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEK 227
G+ ++ + G L D A +Y+ +A+ R G A L +
Sbjct: 141 GHAKSMNFVARYLEQG---LAGAADPHAARAWYRRSAEAGDFRGQAGFATV----LADDG 193
Query: 228 DKKKAEEYMQKA 239
D +AE +M++A
Sbjct: 194 DIDQAEVWMRRA 205
>gb|AAH09945.1|AAH09945 (BC009945) Unknown (protein for IMAGE:4123572) [Homo sapiens]
Length = 705
Score = 68.9 bits (167), Expect = 5e-11
Identities = 52/166 (31%), Positives = 83/166 (49%), Gaps = 8/166 (4%)
Query: 44 KEYERAASFY-KSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
K E A +Y K A++ +P I+ G+GV K+ + A E +KA + + N
Sbjct: 281 KNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVN 340
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG--RGVPS-NYVKATE 159
LG Y + + K+ KA +Y+ A E G +A NLG+++++G GVP N A E
Sbjct: 341 GLGWYYHKFK---KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGE 397
Query: 160 CFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
F KA G++E + Y +GN + D +KA+V+ K A+
Sbjct: 398 YFHKAAQGGHMEGTLWCSLYYITGNLET-FPRDPEKAVVWAKHVAE 442
Score = 50.4 bits (119), Expect = 2e-05
Identities = 34/118 (28%), Positives = 61/118 (50%), Gaps = 4/118 (3%)
Query: 67 LLGIMYENGRGVPKDEKKAAEYFQK-AVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYF 125
L +++ +GV K+ + A E++ K A++ + P + ++ +G+GV K+ + A+E
Sbjct: 268 LAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELM 327
Query: 126 RIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSG 183
+ A KG A LG Y + + NY KA + + KA GN +A LG ++ G
Sbjct: 328 KKAASKGLHQAVNGLGWYYHKFK---KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDG 382
Score = 45.8 bits (107), Expect = 4e-04
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENG--RGVP-KDEKKAAEYFQKAVDNDIPRG 100
K Y +AA ++ A + G P A LG+++ +G GVP +++ A EYF KA G
Sbjct: 351 KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEG 410
Query: 101 YNNLGVMYKEG--RGVPKDEKKAVEYFR-IATEKGYTNAYINLGI-MYMEG 147
+ Y G P+D +KAV + + +A + GY I G+ Y+EG
Sbjct: 411 TLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEG 461
>ref|XP_045277.1| (XM_045277) KIAA0746 protein [Homo sapiens]
Length = 979
Score = 68.9 bits (167), Expect = 5e-11
Identities = 52/166 (31%), Positives = 83/166 (49%), Gaps = 8/166 (4%)
Query: 44 KEYERAASFY-KSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
K E A +Y K A++ +P I+ G+GV K+ + A E +KA + + N
Sbjct: 555 KNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVN 614
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG--RGVPS-NYVKATE 159
LG Y + + K+ KA +Y+ A E G +A NLG+++++G GVP N A E
Sbjct: 615 GLGWYYHKFK---KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGE 671
Query: 160 CFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
F KA G++E + Y +GN + D +KA+V+ K A+
Sbjct: 672 YFHKAAQGGHMEGTLWCSLYYITGNLET-FPRDPEKAVVWAKHVAE 716
Score = 50.4 bits (119), Expect = 2e-05
Identities = 34/118 (28%), Positives = 61/118 (50%), Gaps = 4/118 (3%)
Query: 67 LLGIMYENGRGVPKDEKKAAEYFQK-AVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYF 125
L +++ +GV K+ + A E++ K A++ + P + ++ +G+GV K+ + A+E
Sbjct: 542 LAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELM 601
Query: 126 RIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSG 183
+ A KG A LG Y + + NY KA + + KA GN +A LG ++ G
Sbjct: 602 KKAASKGLHQAVNGLGWYYHKFK---KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDG 656
Score = 45.8 bits (107), Expect = 4e-04
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENG--RGVP-KDEKKAAEYFQKAVDNDIPRG 100
K Y +AA ++ A + G P A LG+++ +G GVP +++ A EYF KA G
Sbjct: 625 KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEG 684
Query: 101 YNNLGVMYKEG--RGVPKDEKKAVEYFR-IATEKGYTNAYINLGI-MYMEG 147
+ Y G P+D +KAV + + +A + GY I G+ Y+EG
Sbjct: 685 TLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEG 735
>dbj|BAA34466.1| (AB018289) KIAA0746 protein [Homo sapiens]
Length = 1029
Score = 68.9 bits (167), Expect = 5e-11
Identities = 52/166 (31%), Positives = 83/166 (49%), Gaps = 8/166 (4%)
Query: 44 KEYERAASFY-KSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
K E A +Y K A++ +P I+ G+GV K+ + A E +KA + + N
Sbjct: 605 KNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELMKKAASKGLHQAVN 664
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG--RGVPS-NYVKATE 159
LG Y + + K+ KA +Y+ A E G +A NLG+++++G GVP N A E
Sbjct: 665 GLGWYYHKFK---KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGE 721
Query: 160 CFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
F KA G++E + Y +GN + D +KA+V+ K A+
Sbjct: 722 YFHKAAQGGHMEGTLWCSLYYITGNLET-FPRDPEKAVVWAKHVAE 766
Score = 50.4 bits (119), Expect = 2e-05
Identities = 34/118 (28%), Positives = 61/118 (50%), Gaps = 4/118 (3%)
Query: 67 LLGIMYENGRGVPKDEKKAAEYFQK-AVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYF 125
L +++ +GV K+ + A E++ K A++ + P + ++ +G+GV K+ + A+E
Sbjct: 592 LAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFKGQGVKKNRRLALELM 651
Query: 126 RIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSG 183
+ A KG A LG Y + + NY KA + + KA GN +A LG ++ G
Sbjct: 652 KKAASKGLHQAVNGLGWYYHKFK---KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDG 706
Score = 45.8 bits (107), Expect = 4e-04
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENG--RGVP-KDEKKAAEYFQKAVDNDIPRG 100
K Y +AA ++ A + G P A LG+++ +G GVP +++ A EYF KA G
Sbjct: 675 KNYAKAAKYWLKAEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEG 734
Query: 101 YNNLGVMYKEG--RGVPKDEKKAVEYFR-IATEKGYTNAYINLGI-MYMEG 147
+ Y G P+D +KAV + + +A + GY I G+ Y+EG
Sbjct: 735 TLWCSLYYITGNLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKGLNAYLEG 785
>ref|NP_356872.1| (NC_003063) AGR_L_2168p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK89657.1| (AE008308) AGR_L_2168p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 370
Score = 68.2 bits (165), Expect = 8e-11
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 18 LFSALGAE--HLEQKRNYIYKGEEAYNN---KEYERAASFYKSAIKNGEPLAYVLLGIMY 72
++ +GA+ L ++ + + +EAY + EY +A + +NG+ A L+ M
Sbjct: 75 VYQRMGADLPALPPEKEFKGRVDEAYGHFQRGEYVQALDKALTRAQNGDASAQTLVAEMM 134
Query: 73 ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKG 132
G G+ +DEK AA ++Q+A + P ++ EG+ V +D+ KA ++ R A E G
Sbjct: 135 SRGLGIARDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVTRDKAKADDFMRRAAEAG 194
Query: 133 YTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGND 185
+A N G + + + A + K+ +G +A + IY+S D
Sbjct: 195 NASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAVSQIYWSVKD 247
Score = 51.6 bits (122), Expect = 8e-06
Identities = 49/229 (21%), Positives = 92/229 (39%), Gaps = 47/229 (20%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEY--------------- 88
++ + AA +Y+ A + G+P+A ++ G+ V +D+ KA ++
Sbjct: 142 RDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVTRDKAKADDFMRRAAEAGNASAQFN 201
Query: 89 ---------------------FQKAVDNDIPRGYNNLGVMYKEGRGVPKDEK-KAVEYFR 126
++K+ + I + +Y + VP ++K KA ++
Sbjct: 202 WGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAVSQIYWSVKDVPTEKKAKARDWLM 261
Query: 127 IATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQ 186
A + GY A ++LG+ + G G N + A +GNV A + +Y
Sbjct: 262 RAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLYGAAQRGNVVAQNKVAHLYVQA--- 318
Query: 187 LGIEPDKDKAIVYYKMA--ADMSSSRAYEGLAESYQYGLGVEKDKKKAE 233
LG PD +A +Y ++ A + R E + G+ E+ KK E
Sbjct: 319 LGTRPDPVEAAKWYVLSRRAGLKDPR-----LEDFYLGITDEQQKKAIE 362
>ref|NP_534243.1| (NC_003305) enhanced entry protein [Agrobacterium tumefaciens str.
C58 (U. Washington)]
gb|AAL44559.1| (AE009306) enhanced entry protein [Agrobacterium tumefaciens str.
C58 (U. Washington)]
Length = 328
Score = 68.2 bits (165), Expect = 8e-11
Identities = 45/173 (26%), Positives = 83/173 (47%), Gaps = 5/173 (2%)
Query: 18 LFSALGAE--HLEQKRNYIYKGEEAYNN---KEYERAASFYKSAIKNGEPLAYVLLGIMY 72
++ +GA+ L ++ + + +EAY + EY +A + +NG+ A L+ M
Sbjct: 33 VYQRMGADLPALPPEKEFKGRVDEAYGHFQRGEYVQALDKALTRAQNGDASAQTLVAEMM 92
Query: 73 ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKG 132
G G+ +DEK AA ++Q+A + P ++ EG+ V +D+ KA ++ R A E G
Sbjct: 93 SRGLGIARDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVTRDKAKADDFMRRAAEAG 152
Query: 133 YTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGND 185
+A N G + + + A + K+ +G +A + IY+S D
Sbjct: 153 NASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAVSQIYWSVKD 205
Score = 51.6 bits (122), Expect = 8e-06
Identities = 49/229 (21%), Positives = 92/229 (39%), Gaps = 47/229 (20%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEY--------------- 88
++ + AA +Y+ A + G+P+A ++ G+ V +D+ KA ++
Sbjct: 100 RDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVTRDKAKADDFMRRAAEAGNASAQFN 159
Query: 89 ---------------------FQKAVDNDIPRGYNNLGVMYKEGRGVPKDEK-KAVEYFR 126
++K+ + I + +Y + VP ++K KA ++
Sbjct: 160 WGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAVSQIYWSVKDVPTEKKAKARDWLM 219
Query: 127 IATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQ 186
A + GY A ++LG+ + G G N + A +GNV A + +Y
Sbjct: 220 RAAKAGYDTAQVDLGVWLVNGFGGERNLDEGFRWLYGAAQRGNVVAQNKVAHLYVQA--- 276
Query: 187 LGIEPDKDKAIVYYKMA--ADMSSSRAYEGLAESYQYGLGVEKDKKKAE 233
LG PD +A +Y ++ A + R E + G+ E+ KK E
Sbjct: 277 LGTRPDPVEAAKWYVLSRRAGLKDPR-----LEDFYLGITDEQQKKAIE 320
>ref|NP_643252.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37788.1| (AE011936) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 252
Score = 68.2 bits (165), Expect = 8e-11
Identities = 53/193 (27%), Positives = 84/193 (43%), Gaps = 7/193 (3%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E+A + A N + A +LL MY GRG+ D A +++ A + N LG
Sbjct: 20 EQARARLHKAAANHDVGAQLLLAQMYAEGRGIAADPAAAMLWYEVAANAGCAEAMNQLGR 79
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
++ G G + AV ++R A E G NL MY GRGV ++ +A + +A
Sbjct: 80 CHELGFGTAINAVLAVLWYRRAAEHGLAWGMYNLAHMYASGRGVAQDHAQALALYHRAAE 139
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVE 226
G+ ++ L G L D A V+Y+ +A+ R G Y L
Sbjct: 140 AGHAKSMNFLARYLDQG---LACAADPLAACVWYRRSAEAGDFRGQAG----YATLLADS 192
Query: 227 KDKKKAEEYMQKA 239
+ +AE +M++A
Sbjct: 193 GELDQAETWMRRA 205
>ref|NP_539245.1| (NC_003317) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
gb|AAL51509.1| (AE009475) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
Length = 298
Score = 67.8 bits (164), Expect = 1e-10
Identities = 56/200 (28%), Positives = 82/200 (41%), Gaps = 2/200 (1%)
Query: 40 AYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR 99
A+ Y A + K + G+ + L+ +Y G GVP D+KKAAE++ KA + I
Sbjct: 30 AFQRGLYLTAFNLAKPQAEKGDAASQTLIAEIYARGLGVPADQKKAAEWYGKAAEQGITE 89
Query: 100 GYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATE 159
+ +G V KD +KA E A E G A N G M M A
Sbjct: 90 AQFRYAALLLQGTYVQKDPQKAEELMLKAAEGGNAMAQFNYGQMLMVKHPGKPGLDLAFP 149
Query: 160 CFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESY 219
F+KA + + IY +G D+ I + KA Y +AA A L
Sbjct: 150 WFQKAADAKLADGEYAISQIYANGTDK--IARNDIKARQYLVLAAQRGYDTAQFDLGRWL 207
Query: 220 QYGLGVEKDKKKAEEYMQKA 239
G G E++ ++ +M A
Sbjct: 208 IEGRGGERNYEQGFGWMHLA 227
Score = 60.1 bits (144), Expect = 2e-08
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 4/164 (2%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
Y K+ ++A A + G +A G M A +FQKA D + G
Sbjct: 103 YVQKDPQKAEELMLKAAEGGNAMAQFNYGQMLMVKHPGKPGLDLAFPWFQKAADAKLADG 162
Query: 101 YNNLGVMYKEGRG-VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATE 159
+ +Y G + +++ KA +Y +A ++GY A +LG +EGRG NY +
Sbjct: 163 EYAISQIYANGTDKIARNDIKARQYLVLAAQRGYDTAQFDLGRWLIEGRGGERNYEQGFG 222
Query: 160 CFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMA 203
A +G V A L +Y D +G E D KA +Y +A
Sbjct: 223 WMHLAAQRGTVMAQAWLARLY---RDGIGTEGDLVKAAAWYIVA 263
Score = 45.4 bits (106), Expect = 6e-04
Identities = 29/88 (32%), Positives = 43/88 (47%), Gaps = 3/88 (3%)
Query: 154 YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYE 213
Y+ A + KG+ + L+ +IY G LG+ D+ KA +Y AA+ + A
Sbjct: 36 YLTAFNLAKPQAEKGDAASQTLIAEIYARG---LGVPADQKKAAEWYGKAAEQGITEAQF 92
Query: 214 GLAESYQYGLGVEKDKKKAEEYMQKACD 241
A G V+KD +KAEE M KA +
Sbjct: 93 RYAALLLQGTYVQKDPQKAEELMLKAAE 120
>ref|XP_130572.1| (XM_130572) similar to dJ842G6.2 (novel protein imilar to SEL1L
(sel-1 (suppressor of lin-12, C.elegans)-like)) [Mus
musculus]
Length = 273
Score = 67.0 bits (162), Expect = 2e-10
Identities = 53/191 (27%), Positives = 88/191 (45%), Gaps = 14/191 (7%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVD-NDIPRGYN 102
K+Y+ A ++ A ++G+PLA L MY G GV + + A E ++ + +
Sbjct: 10 KDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGHWAEKFL 69
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR----GVPSNYVKAT 158
YK+G D ++ + + E GY A N + + G Y A
Sbjct: 70 TAYFAYKDG-----DIDSSLIQYALLAEMGYEVAQSNSAFILESKKAKILGKEKLYPMAL 124
Query: 159 ECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADM-SSSRAYEGLAE 217
+ +A +GN A + +GD +Y G G + D + A +Y +AAD S++A LA
Sbjct: 125 LLWNRAAIQGNAFARVKIGDYHYYG---YGTKKDYETAATHYSIAADKHHSAQAMFNLAY 181
Query: 218 SYQYGLGVEKD 228
Y++GLG+ KD
Sbjct: 182 MYEHGLGIAKD 192
>ref|NP_104918.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB50704.1| (AP003003) hypothetical protein [Mesorhizobium loti]
Length = 346
Score = 67.0 bits (162), Expect = 2e-10
Identities = 52/203 (25%), Positives = 89/203 (43%), Gaps = 4/203 (1%)
Query: 40 AYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR 99
A+ Y+ A + + +NG+P A L+ + G GVP + +A++++ A + +P
Sbjct: 80 AFQRGLYKTAYNLALTRAQNGDPAAQTLVAEILSRGLGVPLNAAEASKWYALAAEQGVPE 139
Query: 100 GYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATE 159
+M +GR V KD K+A + A E G A N M + + KA
Sbjct: 140 AQFQYALMLLDGRYVKKDPKEAYALMQAAAEAGNQLAQFNFAQMLVRQDPGDTGLAKAVS 199
Query: 160 CFRKAMHKGNVEAYILLGDIYYSGNDQLGIEP-DKDKAIVYYKMAADMSSSRAYEGLAES 218
+ +A G +A + IY +G +G +P D +A + AA + A LA
Sbjct: 200 YYERAAATGLADAQYAMSQIYANG---VGGKPRDDAQARRFLAQAARQNYDTAQIDLAAW 256
Query: 219 YQYGLGVEKDKKKAEEYMQKACD 241
G G +D K A + ++A +
Sbjct: 257 MIEGRGGARDLKSAFGWTKQAAE 279
Score = 51.6 bits (122), Expect = 8e-06
Identities = 42/164 (25%), Positives = 69/164 (41%), Gaps = 4/164 (2%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
Y K+ + A + ++A + G LA M KA Y+++A +
Sbjct: 153 YVKKDPKEAYALMQAAAEAGNQLAQFNFAQMLVRQDPGDTGLAKAVSYYERAAATGLADA 212
Query: 101 YNNLGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATE 159
+ +Y G G P+D+ +A + A + Y A I+L +EGRG + A
Sbjct: 213 QYAMSQIYANGVGGKPRDDAQARRFLAQAARQNYDTAQIDLAAWMIEGRGGARDLKSAFG 272
Query: 160 CFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMA 203
++A GNV A L +Y G +G +PD A +Y +A
Sbjct: 273 WTKQAAEGGNVAAQNRLAKLYMQG---IGTDPDLVLAGAWYIVA 313
Score = 50.1 bits (118), Expect = 2e-05
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 1/125 (0%)
Query: 48 RAASFYKSAIKNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
+A S+Y+ A G A + +Y NG G P+D+ +A + +A + +L
Sbjct: 196 KAVSYYERAAATGLADAQYAMSQIYANGVGGKPRDDAQARRFLAQAARQNYDTAQIDLAA 255
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
EGRG +D K A + + A E G A L +YM+G G + V A + A
Sbjct: 256 WMIEGRGGARDLKSAFGWTKQAAEGGNVAAQNRLAKLYMQGIGTDPDLVLAGAWYIVARR 315
Query: 167 KGNVE 171
G ++
Sbjct: 316 AGLID 320
>ref|NP_435252.1| (NC_003037) hypothetical protein [Sinorhizobium meliloti]
gb|AAK64664.1| (AE007195) hypothetical protein [Sinorhizobium meliloti]
Length = 244
Score = 65.9 bits (159), Expect = 4e-10
Identities = 52/200 (26%), Positives = 92/200 (46%), Gaps = 11/200 (5%)
Query: 50 ASFYKSAIKNGEPLAYV-------LLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
A Y SA++ EPLA +G + G GVP++ + A ++ + A + P G
Sbjct: 10 AGDYGSALRIWEPLARAGVARAQNNIGACFAEGLGVPENRELACKWLRLAAEAGDPVGQR 69
Query: 103 NLGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECF 161
N ++ +G G D A EY+R A EKG A L + +EG + ++ ++A
Sbjct: 70 NYAALHMQGLAGTDADYGIAAEYYRRAAEKGDAPAQDMLSWLLLEGEIMTADPLEARRWA 129
Query: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQY 221
A G + LG ++++ LG+E D KA+ ++ AA+ + A L +
Sbjct: 130 ECAAEAGIASSMTRLGMLHHNA---LGVERDAQKAVYWWLKAAERGDADAQAMLGAACHM 186
Query: 222 GLGVEKDKKKAEEYMQKACD 241
G G ++ A ++ +A +
Sbjct: 187 GAGTIRNGVTALVWLIRATE 206
Score = 53.1 bits (126), Expect = 3e-06
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 2/152 (1%)
Query: 30 KRNY--IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAE 87
+RNY ++ A + +Y AA +Y+ A + G+ A +L + G + D +A
Sbjct: 68 QRNYAALHMQGLAGTDADYGIAAEYYRRAAEKGDAPAQDMLSWLLLEGEIMTADPLEARR 127
Query: 88 YFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG 147
+ + A + I LG+++ GV +D +KAV ++ A E+G +A LG G
Sbjct: 128 WAECAAEAGIASSMTRLGMLHHNALGVERDAQKAVYWWLKAAERGDADAQAMLGAACHMG 187
Query: 148 RGVPSNYVKATECFRKAMHKGNVEAYILLGDI 179
G N V A +A G+ A +G +
Sbjct: 188 AGTIRNGVTALVWLIRATEGGSTLAKPFMGPV 219
Score = 48.9 bits (115), Expect = 5e-05
Identities = 34/138 (24%), Positives = 62/138 (44%), Gaps = 1/138 (0%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
E A + + A + G+P+ ++ G G D AAEY+++A + + L
Sbjct: 50 ELACKWLRLAAEAGDPVGQRNYAALHMQGLAGTDADYGIAAEYYRRAAEKGDAPAQDMLS 109
Query: 106 VMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAM 165
+ EG + D +A + A E G ++ LG+++ GV + KA + KA
Sbjct: 110 WLLLEGEIMTADPLEARRWAECAAEAGIASSMTRLGMLHHNALGVERDAQKAVYWWLKAA 169
Query: 166 HKGNVEAYILLGDIYYSG 183
+G+ +A +LG + G
Sbjct: 170 ERGDADAQAMLGAACHMG 187
>gb|AAC37164.1| (L05770) putative regulatory protein PobS [Acinetobacter sp. ADP1]
Length = 392
Score = 65.5 bits (158), Expect = 5e-10
Identities = 35/141 (24%), Positives = 70/141 (48%), Gaps = 3/141 (2%)
Query: 99 RGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKAT 158
+ N L MY G V ++ A+ ++ + +NLG +Y+ G G+ NY
Sbjct: 234 KAQNQLASMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELGL 293
Query: 159 ECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAES 218
+K++ + +AY L ++Y G+ ++ D +A+++YK AA++ + + L +
Sbjct: 294 TWIKKSVKQNYPDAYFTLAELYEKGHI---VQKDIQQALIFYKKAANLRHATSAYRLGQI 350
Query: 219 YQYGLGVEKDKKKAEEYMQKA 239
++ G GV D K A+ + +A
Sbjct: 351 FELGQGVTLDLKLAKRFYHQA 371
Score = 61.6 bits (148), Expect = 8e-09
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 3/144 (2%)
Query: 68 LGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRI 127
L MY NG V ++ A +++K + P G NLG +Y G G+ K+ + + + +
Sbjct: 239 LASMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELGLTWIKK 298
Query: 128 ATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL 187
+ ++ Y +AY L +Y +G V + +A ++KA + + + LG I+ G
Sbjct: 299 SVKQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKAANLRHATSAYRLGQIFELGQ--- 355
Query: 188 GIEPDKDKAIVYYKMAADMSSSRA 211
G+ D A +Y AA SS A
Sbjct: 356 GVTLDLKLAKRFYHQAASNFSSEA 379
Score = 48.9 bits (115), Expect = 5e-05
Identities = 30/100 (30%), Positives = 49/100 (49%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K YE ++ K ++K P AY L +YE G V KD ++A +++KA +
Sbjct: 287 KNYELGLTWIKKSVKQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKAANLRHATSAYR 346
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIM 143
LG +++ G+GV D K A ++ A + A L I+
Sbjct: 347 LGQIFELGQGVTLDLKLAKRFYHQAASNFSSEAKNRLDIL 386
Score = 48.9 bits (115), Expect = 5e-05
Identities = 33/112 (29%), Positives = 55/112 (48%), Gaps = 3/112 (2%)
Query: 130 EKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGI 189
++G A L MY+ G V N A + K + + E + LG +Y +G LGI
Sbjct: 229 QEGCIKAQNQLASMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNG---LGI 285
Query: 190 EPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
E + + + + K + + AY LAE Y+ G V+KD ++A + +KA +
Sbjct: 286 EKNYELGLTWIKKSVKQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKAAN 337
>dbj|BAB22100.1| (AK002437) data source:SPTR, source key:Q14154,
evidence:ISS~homolog to HYPOTHETICAL PROTEIN
KIAA0141~putative [Mus musculus]
Length = 510
Score = 65.5 bits (158), Expect = 5e-10
Identities = 45/163 (27%), Positives = 78/163 (47%), Gaps = 11/163 (6%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
D A YFQKA D + N+G+ + GRG P+D KA+ ++ +A +G++ A
Sbjct: 261 DYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAILFYHLAAVQGHSLAQYRY 320
Query: 141 GIMYMEGRGVPSN--YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEP--DKDKA 196
++ G S+ +A ++A G EA LG ++ EP D+ +A
Sbjct: 321 ARCLLQSPGSLSDPERERAVSLLKQAADSGLTEAQAFLGVLFTK-------EPHLDEQRA 373
Query: 197 IVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
+ Y +AA S++ L Y+ GLG +++ +A + Q+A
Sbjct: 374 VKYLWLAASNGDSQSRFHLGICYEKGLGAQRNLGEAVKCYQQA 416
Score = 58.2 bits (139), Expect = 9e-08
Identities = 44/176 (25%), Positives = 75/176 (42%), Gaps = 40/176 (22%)
Query: 35 YKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKA--------- 85
+ G E +Y A S+++ A G A +G+ E+GRG P+D KA
Sbjct: 251 FLGTENIKTGDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAILFYHLAAV 310
Query: 86 -----AEY------------------------FQKAVDNDIPRGYNNLGVMYKEGRGVPK 116
A+Y ++A D+ + LGV++ + +
Sbjct: 311 QGHSLAQYRYARCLLQSPGSLSDPERERAVSLLKQAADSGLTEAQAFLGVLFTKEPHL-- 368
Query: 117 DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEA 172
DE++AV+Y +A G + + +LGI Y +G G N +A +C+++A GN A
Sbjct: 369 DEQRAVKYLWLAASNGDSQSRFHLGICYEKGLGAQRNLGEAVKCYQQAAAMGNEPA 424
Score = 43.9 bits (102), Expect = 0.002
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 7/146 (4%)
Query: 13 LASLCLFSALGAEHLEQKRNYIY-----KGEEAYNNKEYERAASFYKSAIKNGEPLAYVL 67
L+ LF L A Y Y + + ++ E ERA S K A +G A
Sbjct: 298 LSKAILFYHLAAVQGHSLAQYRYARCLLQSPGSLSDPERERAVSLLKQAADSGLTEAQAF 357
Query: 68 LGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRI 127
LG+++ + DE++A +Y A N + +LG+ Y++G G ++ +AV+ ++
Sbjct: 358 LGVLFTKEPHL--DEQRAVKYLWLAASNGDSQSRFHLGICYEKGLGAQRNLGEAVKCYQQ 415
Query: 128 ATEKGYTNAYINLGIMYMEGRGVPSN 153
A G A L ++ PS+
Sbjct: 416 AAAMGNEPARERLRTLFNVEAAGPSH 441
>ref|NP_286374.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_308712.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG54982.1|AE005243_11 (AE005243) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB34108.1| (AP002552) hypothetical protein [Escherichia coli O157:H7]
Length = 184
Score = 65.1 bits (157), Expect = 7e-10
Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 59 NGEPLAYVLLGIMYENGR-GVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKD 117
+G + LG Y +G G P D +A +++++ + + PR + LG +Y +G GV D
Sbjct: 60 HGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPD 119
Query: 118 EKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA--MHKGNVE 171
+KA+ +++ A E+GY +A LG++Y G G+ N+ ++ + + A H N E
Sbjct: 120 TRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLAAKQHYKNAE 175
Score = 55.5 bits (132), Expect = 6e-07
Identities = 33/109 (30%), Positives = 59/109 (53%), Gaps = 4/109 (3%)
Query: 132 GYTNAYINLGIMYMEGR-GVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
G++ + LG Y+ G G P +Y +A + ++ + N A LG IY G LG++
Sbjct: 61 GHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKG---LGVK 117
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
PD KAI++YK AA+ + A L Y+ G G+ + +++++++ A
Sbjct: 118 PDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLKLA 166
Score = 51.6 bits (122), Expect = 8e-06
Identities = 24/92 (26%), Positives = 50/92 (54%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
+Y +A +Y+ + + P A LG +Y G GV D +KA ++++A + L
Sbjct: 83 DYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTL 142
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
G++Y+ G G+ + ++ ++ ++A ++ Y NA
Sbjct: 143 GLIYRNGSGINVNHYESQKWLKLAAKQHYKNA 174
>ref|NP_102763.1| (NC_002678) exopolysaccharide regulatory protein exoR
[Mesorhizobium loti]
dbj|BAB48549.1| (AP002996) exopolysaccharide regulatory protein; ExoR
[Mesorhizobium loti]
Length = 276
Score = 65.1 bits (157), Expect = 7e-10
Identities = 51/163 (31%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G AY N E+AA YK A +NG+ A L MY G GV +D+ +A ++F + VD D
Sbjct: 54 GFSAYKNGHKEQAAEAYKYAAENGQIGATWKLARMYAEGDGVARDDYEAFKFFSEIVDQD 113
Query: 97 IPRG----------------YNNLGVMYKEGRGVPKDEKKAVEYF-RIATEKGYTNAYIN 139
+ G Y G+ G V ++E A EY+ R A NA
Sbjct: 114 VEPGSPEESYVSDALVALGDYLRKGI---PGSPVTENEVAAQEYYMRAAANYRNPNAQFE 170
Query: 140 LGIMYMEGR-GVPSNYVKATECFRKAMHKGNVEAYILLGDIYY 181
+G M+++G GV ++ +A F+ A KG+ A LG + +
Sbjct: 171 MGQMFLKGEGGVKASVKQAGRWFQLAAAKGHAGAQATLGHLLF 213
>ref|NP_541444.1| (NC_003318) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
gb|AAL53708.1| (AE009683) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
Length = 317
Score = 64.7 bits (156), Expect = 9e-10
Identities = 38/126 (30%), Positives = 63/126 (49%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
+ AA +Y+ A G A +G E G G+ ++ +KA ++Q A D +NL V
Sbjct: 74 KEAAKWYQLAADQGFAPAQYRIGSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAV 133
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
++ G D AV +F A E G ++ NLGI+ +G G+P N ++ + F A +
Sbjct: 134 LFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAAN 193
Query: 167 KGNVEA 172
G+ +A
Sbjct: 194 AGDKDA 199
Score = 59.3 bits (142), Expect = 4e-08
Identities = 43/171 (25%), Positives = 83/171 (48%), Gaps = 5/171 (2%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
+E A + A DI R +G Y EGRGV ++ K+A +++++A ++G+ A +
Sbjct: 37 EEAGPAALREAAAKGDI-RALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRI 95
Query: 141 GIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYY 200
G +G G+ N KA ++ A +GN A L ++ +G + PD A+ ++
Sbjct: 96 GSFNEKGLGMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNG---TPDNAAAVRWF 152
Query: 201 KMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNCKKK 251
AA++ + L GLG+ + +++ ++ A + DK+ +K
Sbjct: 153 TEAAELGVKDSQYNLGILAAKGLGMPVNLEESYKWFALAANAG-DKDAAEK 202
Score = 45.1 bits (105), Expect = 8e-04
Identities = 23/93 (24%), Positives = 46/93 (48%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+ E+A S+Y+ A G A L +++ G D A +F +A + + N
Sbjct: 107 RNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYN 166
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
LG++ +G G+P + +++ ++F +A G +A
Sbjct: 167 LGILAAKGLGMPVNLEESYKWFALAANAGDKDA 199
>ref|NP_253206.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||F83081 hypothetical protein PA4516 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG07904.1|AE004865_5 (AE004865) hypothetical protein [Pseudomonas aeruginosa]
Length = 271
Score = 64.7 bits (156), Expect = 9e-10
Identities = 43/150 (28%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 56 AIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVP 115
A + G A LLG + +G+G+ +D A +F A + N L + G G P
Sbjct: 34 AAREGLTEAQALLGQILLDGQGIQRDPTLARTWFTIAAERGHAMARNMLARCLEHGWGGP 93
Query: 116 KDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
D A ++RIA + G A NL ++ GRGVP + +A +R+A +G+ ++ L
Sbjct: 94 ADPAAAAVHYRIAAQAGLDWARYNLANLHATGRGVPQDQPRAYALYRQAAEQGHAKSMNL 153
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
+G + G L + D +A +Y+ +A+
Sbjct: 154 VGRYHEEG---LVVARDLAQAAHWYRRSAE 180
Score = 57.8 bits (138), Expect = 1e-07
Identities = 47/200 (23%), Positives = 83/200 (41%), Gaps = 28/200 (14%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
A +++ A + G +A +L E+G G P D AA +++ A + NL ++
Sbjct: 63 ARTWFTIAAERGHAMARNMLARCLEHGWGGPADPAAAAVHYRIAAQAGLDWARYNLANLH 122
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
GRGVP+D+ +A +R A E+G+ + +G + EG V + +A +R++ G
Sbjct: 123 ATGRGVPQDQPRAYALYRQAAEQGHAKSMNLVGRYHEEGLVVARDLAQAAHWYRRSAEGG 182
Query: 169 -----------------NVEAYILLGDIYYSGN-----------DQLGIEPDKDKAIVYY 200
+ EA L GN +Q P + A+ YY
Sbjct: 183 DFRGQFSHAAMLSASGRHAEAETWLRRALEGGNLNFLRSARHGLEQSAHPPFRSLALAYY 242
Query: 201 KMAADMSSSRAYEGLAESYQ 220
+ AA + E L ++ +
Sbjct: 243 RRAAQLGDDIDREALEQALE 262
>ref|NP_460954.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL20913.1| (AE008788) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 564
Score = 63.5 bits (153), Expect = 2e-09
Identities = 38/133 (28%), Positives = 68/133 (50%), Gaps = 3/133 (2%)
Query: 85 AAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMY 144
A ++ ++ + + P L Y +G GV +D KK + Y A E G ++A + +G +
Sbjct: 429 AMKWLTQSAEQNHPGALLFLAYAYNDGDGVAQDSKKYLSYLFKAAELGESDAQLEVGYLN 488
Query: 145 MEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAA 204
+ G G+P N +A + +K+ +GN +A+ LG +Y +G+ G+E D +KA ++ A
Sbjct: 489 LIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGD---GVEKDLNKAKLHLTAAV 545
Query: 205 DMSSSRAYEGLAE 217
A L E
Sbjct: 546 KGGVKPALAALKE 558
Score = 62.0 bits (149), Expect = 6e-09
Identities = 34/121 (28%), Positives = 58/121 (47%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G+ + Y+ A + + + P A + L Y +G GV +D KK Y KA +
Sbjct: 417 GKYEFECTNYDAAMKWLTQSAEQNHPGALLFLAYAYNDGDGVAQDSKKYLSYLFKAAELG 476
Query: 97 IPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVK 156
+G + G G+PK+ +A ++ + + ++G A+ NLG+MY G GV + K
Sbjct: 477 ESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGDGVEKDLNK 536
Query: 157 A 157
A
Sbjct: 537 A 537
Score = 49.3 bits (116), Expect = 4e-05
Identities = 30/93 (32%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 40 AYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR 99
A ++K+Y S+ A + GE A + +G + G G+PK+ +A ++ +K+ D +
Sbjct: 459 AQDSKKY---LSYLFKAAELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQ 515
Query: 100 GYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKG 132
+ NLG+MY+ G GV KD KA + A + G
Sbjct: 516 AHYNLGLMYRNGDGVEKDLNKAKLHLTAAVKGG 548
>ref|NP_415180.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P77296|YBET_ECOLI Hypothetical protein ybeT
pir||E64799 ybeT protein - Escherichia coli
gb|AAB40848.1| (U82598) hypothetical protein [Escherichia coli]
gb|AAC73748.1| (AE000169) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35294.1| (D90704) Hypothetical protein SPAC24B11.10c [Escherichia coli]
dbj|BAA35299.1| (D90705) Hypothetical protein SPAC24B11.10c [Escherichia coli]
Length = 184
Score = 63.5 bits (153), Expect = 2e-09
Identities = 31/100 (31%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 59 NGEPLAYVLLGIMYENGR-GVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKD 117
+G + LG Y +G G P D +A +++++ + + PR + LG +Y +G GV D
Sbjct: 60 HGHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPD 119
Query: 118 EKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
+KA+ +++ A E+GY +A LG++Y G G+ N+ ++
Sbjct: 120 TRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYES 159
Score = 54.7 bits (130), Expect = 1e-06
Identities = 32/107 (29%), Positives = 58/107 (53%), Gaps = 4/107 (3%)
Query: 132 GYTNAYINLGIMYMEGR-GVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
G++ + LG Y+ G G P +Y +A + ++ + N A LG IY G LG++
Sbjct: 61 GHSTSQYRLGEFYLHGSDGKPLDYTQARYWYEQSAEQENPRAQSKLGWIYLKG---LGVK 117
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQ 237
PD KAI++YK AA+ + A L Y+ G G+ + +++++++
Sbjct: 118 PDTRKAILWYKEAAEQGYAHAQYTLGLIYRNGSGINVNHYESQKWLK 164
Score = 50.1 bits (118), Expect = 2e-05
Identities = 23/92 (25%), Positives = 49/92 (53%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
+Y +A +Y+ + + P A LG +Y G GV D +KA ++++A + L
Sbjct: 83 DYTQARYWYEQSAEQENPRAQSKLGWIYLKGLGVKPDTRKAILWYKEAAEQGYAHAQYTL 142
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
G++Y+ G G+ + ++ ++ ++ ++ Y NA
Sbjct: 143 GLIYRNGSGINVNHYESQKWLKLTAKQHYKNA 174
>ref|NP_564992.1| (NM_105727) expressed protein [Arabidopsis thaliana]
gb|AAK59789.1| (AY037204) At1g70590/F5A18_23 [Arabidopsis thaliana]
Length = 351
Score = 62.8 bits (151), Expect = 4e-09
Identities = 41/159 (25%), Positives = 77/159 (47%), Gaps = 9/159 (5%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
E E+A + Y+ A + G+ + LGI Y + P + K+A ++ +++ +N R L
Sbjct: 157 EKEKAVNLYRRASELGDAVGQCNLGIAYLQVQ--PSNPKEAMKWLKQSAENGYVRAQYQL 214
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
+ GR V + +A +++ A E GY A N+ + Y G G+P N A + ++A
Sbjct: 215 ALCLHHGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWMKRA 274
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMA 203
G+ +A G +S + L K+++Y ++A
Sbjct: 275 ADHGHSKAQFEHGLALFSEGEML-------KSVLYLELA 306
>gb|AAH11926.1|AAH11926 (BC011926) Similar to KIAA0141 gene product [Homo sapiens]
Length = 515
Score = 62.4 bits (150), Expect = 5e-09
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
D A YFQKA + N G+ ++ GRG P+D KAV Y+++A +G++ A
Sbjct: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
Query: 141 GIMYMEGRGVPSN--YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEP--DKDKA 196
+ N +A ++A G EA LG ++ EP D+ +A
Sbjct: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTK-------EPYLDEQRA 372
Query: 197 IVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
+ Y +AA+ S++ L Y+ GLGV+++ +A Q++
Sbjct: 373 VKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQS 415
Score = 59.3 bits (142), Expect = 4e-08
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 40/187 (21%)
Query: 35 YKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQ---- 90
+ G E + ++ A S+++ A G A G+ +E+GRG P+D KA Y+Q
Sbjct: 250 FLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAAS 309
Query: 91 ----------------------------------KAVDNDIPRGYNNLGVMYKEGRGVPK 116
+A D+ + LGV++ + +
Sbjct: 310 QGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYL-- 367
Query: 117 DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILL 176
DE++AV+Y +A G + + +LGI Y +G GV N +A C++++ GN A L
Sbjct: 368 DEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERL 427
Query: 177 GDIYYSG 183
++ G
Sbjct: 428 RALFSMG 434
Score = 45.4 bits (106), Expect = 6e-04
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
N E +RA S K A +G A LG+++ + DE++A +Y A +N +
Sbjct: 332 NPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYL--DEQRAVKYLWLAANNGDSQSRY 389
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVP 151
+LG+ Y++G GV ++ +A+ ++ + G A L ++ G P
Sbjct: 390 HLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMGAAAP 438
>ref|NP_386885.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC47358.1| (AL591791) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 381
Score = 62.4 bits (150), Expect = 5e-09
Identities = 57/230 (24%), Positives = 102/230 (43%), Gaps = 9/230 (3%)
Query: 18 LFSALGAE--HLEQKRNYIYKGEEAYNNKE---YERAASFYKSAIKNGEPLAYVLLGIMY 72
+F +GAE L +++ + K +EAY + Y A + G+P A L+ +
Sbjct: 86 VFDRMGAELPALPEEKPFTGKIDEAYGAFQRGYYLTAMDLALPRAQLGDPAAQTLVAAIL 145
Query: 73 ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKG 132
E G GV +D K AA ++ +A +N P ++ EGR V +D ++A E + A + G
Sbjct: 146 EQGLGVARDAKAAAFWYGQAANNGDPAAMFKYALILMEGRYVKRDRERADELMKKAADLG 205
Query: 133 YTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPD 192
+A N G + A + K+ +G +A L IY + + GIE
Sbjct: 206 NASAQFNYGQTLVADMPGERGLKAAMPYYEKSAEQGIADAQYALSQIYLNVD---GIEES 262
Query: 193 K-DKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACD 241
K +A + AA A +A G+ +++ ++ +M++A +
Sbjct: 263 KRARAREWLLRAARAGYDTAQLDIAIWLIEGIAGDRNLEEGFAWMKRAAE 312
Score = 47.8 bits (112), Expect = 1e-04
Identities = 47/219 (21%), Positives = 85/219 (38%), Gaps = 45/219 (20%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAE---------------- 87
++ + AA +Y A NG+P A ++ GR V +D ++A E
Sbjct: 153 RDAKAAAFWYGQAANNGDPAAMFKYALILMEGRYVKRDRERADELMKKAADLGNASAQFN 212
Query: 88 --------------------YFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEK-KAVEYFR 126
Y++K+ + I L +Y G+ + ++ +A E+
Sbjct: 213 YGQTLVADMPGERGLKAAMPYYEKSAEQGIADAQYALSQIYLNVDGIEESKRARAREWLL 272
Query: 127 IATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQ 186
A GY A +++ I +EG N + ++A GNV A L +Y +
Sbjct: 273 RAARAGYDTAQLDIAIWLIEGIAGDRNLEEGFAWMKRAAESGNVVAQNRLSHLYVNA--- 329
Query: 187 LGIEPDKDKAIVYYKMA-----ADMSSSRAYEGLAESYQ 220
+G P+ +A +Y ++ D + Y GL E+ Q
Sbjct: 330 IGTRPNPVEAAKWYVLSRRAGLKDDALEDFYLGLNETQQ 368
>ref|NP_055588.1| (NM_014773) KIAA0141 gene product [Homo sapiens]
sp|Q14154|Y141_HUMAN Hypothetical protein KIAA0141
dbj|BAA09490.1| (D50931) The KIAA0141 gene product is novel. [Homo sapiens]
Length = 515
Score = 62.4 bits (150), Expect = 5e-09
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
D A YFQKA + N G+ ++ GRG P+D KAV Y+++A +G++ A
Sbjct: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
Query: 141 GIMYMEGRGVPSN--YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEP--DKDKA 196
+ N +A ++A G EA LG ++ EP D+ +A
Sbjct: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTK-------EPYLDEQRA 372
Query: 197 IVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
+ Y +AA+ S++ L Y+ GLGV+++ +A Q++
Sbjct: 373 VKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQS 415
Score = 59.3 bits (142), Expect = 4e-08
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 40/187 (21%)
Query: 35 YKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQ---- 90
+ G E + ++ A S+++ A G A G+ +E+GRG P+D KA Y+Q
Sbjct: 250 FLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAAS 309
Query: 91 ----------------------------------KAVDNDIPRGYNNLGVMYKEGRGVPK 116
+A D+ + LGV++ + +
Sbjct: 310 QGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYL-- 367
Query: 117 DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILL 176
DE++AV+Y +A G + + +LGI Y +G GV N +A C++++ GN A L
Sbjct: 368 DEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERL 427
Query: 177 GDIYYSG 183
++ G
Sbjct: 428 RALFSMG 434
Score = 45.4 bits (106), Expect = 6e-04
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
N E +RA S K A +G A LG+++ + DE++A +Y A +N +
Sbjct: 332 NPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYL--DEQRAVKYLWLAANNGDSQSRY 389
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVP 151
+LG+ Y++G GV ++ +A+ ++ + G A L ++ G P
Sbjct: 390 HLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMGAAAP 438
>gb|AAH07855.1|AAH07855 (BC007855) KIAA0141 gene product [Homo sapiens]
gb|AAH10452.1|AAH10452 (BC010452) KIAA0141 gene product [Homo sapiens]
gb|AAH11269.1|AAH11269 (BC011269) KIAA0141 gene product [Homo sapiens]
Length = 515
Score = 62.4 bits (150), Expect = 5e-09
Identities = 45/163 (27%), Positives = 76/163 (46%), Gaps = 11/163 (6%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
D A YFQKA + N G+ ++ GRG P+D KAV Y+++A +G++ A
Sbjct: 260 DHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAASQGHSLAQYRY 319
Query: 141 GIMYMEGRGVPSN--YVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEP--DKDKA 196
+ N +A ++A G EA LG ++ EP D+ +A
Sbjct: 320 ARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTK-------EPYLDEQRA 372
Query: 197 IVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
+ Y +AA+ S++ L Y+ GLGV+++ +A Q++
Sbjct: 373 VKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQS 415
Score = 59.3 bits (142), Expect = 4e-08
Identities = 45/187 (24%), Positives = 79/187 (42%), Gaps = 40/187 (21%)
Query: 35 YKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQ---- 90
+ G E + ++ A S+++ A G A G+ +E+GRG P+D KA Y+Q
Sbjct: 250 FLGTENMKSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQLAAS 309
Query: 91 ----------------------------------KAVDNDIPRGYNNLGVMYKEGRGVPK 116
+A D+ + LGV++ + +
Sbjct: 310 QGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYL-- 367
Query: 117 DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILL 176
DE++AV+Y +A G + + +LGI Y +G GV N +A C++++ GN A L
Sbjct: 368 DEQRAVKYLWLAANNGDSQSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERL 427
Query: 177 GDIYYSG 183
++ G
Sbjct: 428 RALFSMG 434
Score = 45.4 bits (106), Expect = 6e-04
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Query: 43 NKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYN 102
N E +RA S K A +G A LG+++ + DE++A +Y A +N +
Sbjct: 332 NPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPYL--DEQRAVKYLWLAANNGDSQSRY 389
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVP 151
+LG+ Y++G GV ++ +A+ ++ + G A L ++ G P
Sbjct: 390 HLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERLRALFSMGAAAP 438
>gb|AAM66148.1|AF326627_1 (AF326627) JHP1437-like protein [Helicobacter pylori]
Length = 253
Score = 61.6 bits (148), Expect = 8e-09
Identities = 34/93 (36%), Positives = 48/93 (51%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K+ ++ +Y A + E L L+G Y +G GV KD KKA EY KA + + +G
Sbjct: 152 KKDKKDLEYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYA 211
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
L Y EG+GV KDEK+ E + + G A
Sbjct: 212 LAAFYNEGKGVAKDEKQTTENLEKSCKLGLKEA 244
Score = 61.2 bits (147), Expect = 1e-08
Identities = 58/243 (23%), Positives = 101/243 (40%), Gaps = 15/243 (6%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL +LCL L AE + I+ G Y +K++ RA +++ A + + +L
Sbjct: 13 LCLVALCL-GGLMAE--SNPKELIFLGITIYTDKDFTRAKEYFEKACELHDADGCAILRE 69
Query: 71 MYENG--RGVPKDE-KKAAEYFQ--KAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYF 125
Y +G ++ +KA E+ KA ++ +L Y D K A+EY+
Sbjct: 70 AYSKVILKGSARESIEKALEHTATAKACKSNDAEKCKDLAEFYFNAN----DLKNALEYY 125
Query: 126 RIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGND 185
+ + + Y + K E + KA L+G+ Y G
Sbjct: 126 SKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNEALTCTLVGEFYRDGE- 184
Query: 186 QLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
G+ D KA Y A +++ ++ LA Y G GV KD+K+ E ++K+C +
Sbjct: 185 --GVTKDLKKAFEYSAKACELNDAKGCYALAAFYNEGKGVAKDEKQTTENLEKSCKLGLK 242
Query: 246 KNC 248
+ C
Sbjct: 243 EAC 245
>gb|AAC38141.1| (AF039535) AlgK precursor [Pseudomonas aeruginosa]
Length = 475
Score = 61.2 bits (147), Expect = 1e-08
Identities = 40/135 (29%), Positives = 71/135 (51%), Gaps = 1/135 (0%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
+ E+ + K+A +P A +LLG +Y +G+ P+D +KA + KA ++ P+ L
Sbjct: 293 DLEKMLGYLKNAQDAAQPRAELLLGRLYYDGKWAPQDPRKAERHLLKAAASE-PQANYYL 351
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
G +Y+ G +KAV++ +A G +A + L ++ +GRG+ N V A + A
Sbjct: 352 GQIYRRGFLGKVYPQKAVDHLILAARAGQASADMALAQLWSQGRGIQPNRVNAYVFGQLA 411
Query: 165 MHKGNVEAYILLGDI 179
+ + +A LLG I
Sbjct: 412 VQQQVPQASDLLGQI 426
>ref|NP_252233.1| (NC_002516) alginate biosynthetic protein AlgK precursor
[Pseudomonas aeruginosa]
pir||D83202 alginate biosynthetic protein AlgK precursor PA3543 [imported] -
Pseudomonas aeruginosa (strain PAO1)
emb|CAA67592.1| (X99206) algK [Pseudomonas aeruginosa]
gb|AAG06931.1|AE004775_2 (AE004775) alginate biosynthetic protein AlgK precursor
[Pseudomonas aeruginosa]
Length = 475
Score = 61.2 bits (147), Expect = 1e-08
Identities = 40/135 (29%), Positives = 71/135 (51%), Gaps = 1/135 (0%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
+ E+ + K+A +P A +LLG +Y +G+ P+D +KA + KA ++ P+ L
Sbjct: 293 DLEKMLGYLKNAQDAAQPRAELLLGRLYYDGKWAPQDPRKAERHLLKAAASE-PQANYYL 351
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
G +Y+ G +KAV++ +A G +A + L ++ +GRG+ N V A + A
Sbjct: 352 GQIYRRGFLGKVYPQKAVDHLILAARAGQASADMALAQLWSQGRGIQPNRVNAYVFGQLA 411
Query: 165 MHKGNVEAYILLGDI 179
+ + +A LLG I
Sbjct: 412 VQQQVPQASDLLGQI 426
>dbj|BAA19847.1| (AB003310) chitin synthase regulatory factor [Candida albicans]
Length = 687
Score = 60.5 bits (145), Expect = 2e-08
Identities = 52/201 (25%), Positives = 86/201 (41%), Gaps = 9/201 (4%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
+ A + K G A LL Y +G D K+A FQ A +
Sbjct: 359 KEAVKYLKRLSDKGYVEAQYLLADAYSSGALDKIDNKEAFILFQSAAKHGHVESAFRTSF 418
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR-GVPSNYVKATECFRKAM 165
Y+EG G +D +KAVE+ +IA + + A LG+ GR G+P+N + + K +
Sbjct: 419 CYEEGLGTGRDSRKAVEFLKIAASRNHPAAMYKLGVYSFYGRMGLPANDMNTKKMGIKWL 478
Query: 166 HK-GNVEAYIL------LGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAES 218
+ NV + LG +YY+G + + + DK + + AA + ++ L
Sbjct: 479 TRAANVATELTAAAPYELGKLYYNGFEDI-VLIDKKYGLELFAQAAALGHLQSAAILGHH 537
Query: 219 YQYGLGVEKDKKKAEEYMQKA 239
Y+ G V +D + Y +A
Sbjct: 538 YEIGEIVPQDSNLSIHYYTQA 558
Score = 55.8 bits (133), Expect = 4e-07
Identities = 58/255 (22%), Positives = 101/255 (38%), Gaps = 50/255 (19%)
Query: 42 NNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGY 101
+NKE A ++SA K+G + YE G G +D +KA E+ + A + P
Sbjct: 393 DNKE---AFILFQSAAKHGHVESAFRTSFCYEEGLGTGRDSRKAVEFLKIAASRNHPAAM 449
Query: 102 NNLGVMYKEGR-GVPK-------------------------------------------- 116
LGV GR G+P
Sbjct: 450 YKLGVYSFYGRMGLPANDMNTKKMGIKWLTRAANVATELTAAAPYELGKLYYNGFEDIVL 509
Query: 117 -DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL 175
D+K +E F A G+ + LG Y G VP + + + +A G+ + +
Sbjct: 510 IDKKYGLELFAQAAALGHLQSAAILGHHYEIGEIVPQDSNLSIHYYTQAALGGDPNSMLA 569
Query: 176 LGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
+ Y G++ + D ++A + K AA+ + +A LA Y+ G+G K+ +A+ +
Sbjct: 570 MCAWYLVGSEPY-LPKDDNEAFEWAKRAANCNLPKAQFALANFYEKGIGCIKNINEAQSW 628
Query: 236 MQKACDFDIDKNCKK 250
+KA + +K+ K+
Sbjct: 629 YKKAAENGDEKSLKR 643
Score = 43.5 bits (101), Expect = 0.002
Identities = 36/146 (24%), Positives = 58/146 (39%), Gaps = 2/146 (1%)
Query: 35 YKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVD 94
Y G E + + + A G + +LG YE G VP+D + Y+ +A
Sbjct: 501 YNGFEDIVLIDKKYGLELFAQAAALGHLQSAAILGHHYEIGEIVPQDSNLSIHYYTQAAL 560
Query: 95 NDIPRGYNNLGVMYKEGRG--VPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPS 152
P + Y G +PKD+ +A E+ + A A L Y +G G
Sbjct: 561 GGDPNSMLAMCAWYLVGSEPYLPKDDNEAFEWAKRAANCNLPKAQFALANFYEKGIGCIK 620
Query: 153 NYVKATECFRKAMHKGNVEAYILLGD 178
N +A ++KA G+ ++ L D
Sbjct: 621 NINEAQSWYKKAAENGDEKSLKRLTD 646
>ref|NP_106249.1| (NC_002678) unknown protein [Mesorhizobium loti]
dbj|BAB52035.1| (AP003007) unknown protein [Mesorhizobium loti]
Length = 1360
Score = 60.5 bits (145), Expect = 2e-08
Identities = 39/152 (25%), Positives = 78/152 (50%), Gaps = 5/152 (3%)
Query: 54 KSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRG 113
+ A G+ A +G Y RGV +D AA++++K+ + +G Y++G G
Sbjct: 1089 RDAAAGGDAKALFEIGSRYAESRGVKEDMAAAAKWYEKSAELGFAPAEYRIGNFYEKGIG 1148
Query: 114 VPKDEKKAVEYFRIATEKGYTNAYINLGIMY-MEGRGVPSNYVKATECFRKAMHKGNVEA 172
V +D KK+ ++++A E+G +A NL +++ M GV N A F++A G ++
Sbjct: 1149 VARDIKKSKTWYQLAAEQGNASAMHNLAVLFAMAADGVTDN-ESAAHWFQEAADLGVKDS 1207
Query: 173 YILLGDIYYSGNDQLGIEPDKDKAIVYYKMAA 204
LG + G +G++ + +++ ++ + A
Sbjct: 1208 QFNLGILAAKG---VGMKQNLEESYKWFALVA 1236
Score = 59.3 bits (142), Expect = 4e-08
Identities = 47/192 (24%), Positives = 88/192 (45%), Gaps = 6/192 (3%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
AA +Y+ + + G A +G YE G GV +D KK+ ++Q A + +NL V++
Sbjct: 1120 AAKWYEKSAELGFAPAEYRIGNFYEKGIGVARDIKKSKTWYQLAAEQGNASAMHNLAVLF 1179
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
D + A +F+ A + G ++ NLGI+ +G G+ N ++ + F G
Sbjct: 1180 AMAADGVTDNESAAHWFQEAADLGVKDSQFNLGILAAKGVGMKQNLEESYKWFALVAKTG 1239
Query: 169 NVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG---LGV 225
+ +A +I N + ++ +A A ++++ + ES+Q G +
Sbjct: 1240 DKDAAAKRDEI---ANALRPEQLERARAATELWKAKPLNAATNSADIPESWQEGTPQMTA 1296
Query: 226 EKDKKKAEEYMQ 237
D KKA + +Q
Sbjct: 1297 GIDMKKAVKNIQ 1308
Score = 41.6 bits (96), Expect = 0.008
Identities = 20/93 (21%), Positives = 50/93 (53%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
++ +++ ++Y+ A + G A L +++ D + AA +FQ+A D + N
Sbjct: 1151 RDIKKSKTWYQLAAEQGNASAMHNLAVLFAMAADGVTDNESAAHWFQEAADLGVKDSQFN 1210
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
LG++ +G G+ ++ +++ ++F + + G +A
Sbjct: 1211 LGILAAKGVGMKQNLEESYKWFALVAKTGDKDA 1243
>ref|NP_521481.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD17150.1| (AL646074) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 276
Score = 60.1 bits (144), Expect = 2e-08
Identities = 33/104 (31%), Positives = 49/104 (46%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
++Y RA + A G+ A LG+MY +G G + AA +F A + IP
Sbjct: 144 RDYPRALHLLRQAADRGDAAAAYYLGLMYRSGYGTAANTALAAHWFDGAARHGIPAAMFM 203
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG 147
L Y++G GVP+DE +A+ + A E A L + Y G
Sbjct: 204 LANAYRDGDGVPRDEARALALYEQAAEHELPEAVQALAMAYQNG 247
Score = 47.0 bits (110), Expect = 2e-04
Identities = 33/116 (28%), Positives = 49/116 (41%), Gaps = 2/116 (1%)
Query: 77 GVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
GV +D +A ++A D LG+MY+ G G + A +F A G A
Sbjct: 141 GVARDYPRALHLLRQAADRGDAAAAYYLGLMYRSGYGTAANTALAAHWFDGAARHGIPAA 200
Query: 137 YINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPD 192
L Y +G GVP + +A + +A EA L Y +G +LG+ D
Sbjct: 201 MFMLANAYRDGDGVPRDEARALALYEQAAEHELPEAVQALAMAYQNG--ELGLARD 254
>ref|NP_223186.1| (NC_000921) putative [Helicobacter pylori J99]
pir||A71927 hypothetical protein jhp0468 - Helicobacter pylori (strain J99)
gb|AAD06051.1| (AE001481) putative [Helicobacter pylori J99]
Length = 283
Score = 60.1 bits (144), Expect = 2e-08
Identities = 64/241 (26%), Positives = 105/241 (43%), Gaps = 43/241 (17%)
Query: 30 KRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYF 89
K Y G + +N +Y++A +K A + L V L MY G+GV D KKA Y
Sbjct: 57 KTYYFENGLDHFNQGQYKQAFKDFKLAQEYSIGLGNVYLAKMYLEGKGVKVDYKKAQFYA 116
Query: 90 QKAVDNDIPRGYNN--------LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN-- 139
Q A+ +GY + LG M EG G+ KD K+A++ +R + ++N N
Sbjct: 117 QNAI-----KGYGSGLLGGALILGRMQAEGLGMKKDLKQALKTYRHVV-RMFSNKSANFA 170
Query: 140 --------------LGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGND 185
+G +++ G+ +N +K F + K + + D S D
Sbjct: 171 NKFGSNLAEFTSMLIGSRFIDLSGLSANPIKFGNKFGILVKKA-----LQIKDNTLSWED 225
Query: 186 QLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDID 245
I + I+ K M G+A Y+ GLG K K +A++++QK+ +F +
Sbjct: 226 IAEISSN----IILLKQ--QMGEILYRIGIA--YKEGLGTRKKKDRAKKFLQKSAEFGYE 277
Query: 246 K 246
K
Sbjct: 278 K 278
>ref|NP_439767.1| (NC_000907) H. influenzae predicted coding region HI1625
[Haemophilus influenzae Rd]
sp|P44277|YG25_HAEIN Hypothetical protein HI1625
pir||H64038 hypothetical protein HI1625 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC23273.1| (U32835) H. influenzae predicted coding region HI1625 [Haemophilus
influenzae Rd]
Length = 165
Score = 58.9 bits (141), Expect = 5e-08
Identities = 29/79 (36%), Positives = 45/79 (56%)
Query: 102 NNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECF 161
+NLG++Y GRG +D +KA +F A EKG NLG+MY+ G V N +A + F
Sbjct: 70 SNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLF 129
Query: 162 RKAMHKGNVEAYILLGDIY 180
+ + +A ++L +IY
Sbjct: 130 ERTAQAKDTDAMMMLSNIY 148
Score = 53.1 bits (126), Expect = 3e-06
Identities = 27/77 (35%), Positives = 45/77 (58%)
Query: 68 LGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRI 127
LG++Y GRG +D +KA +F +A + +G NNLGVMY G V ++ ++A++ F
Sbjct: 72 LGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFER 131
Query: 128 ATEKGYTNAYINLGIMY 144
+ T+A + L +Y
Sbjct: 132 TAQAKDTDAMMMLSNIY 148
Score = 43.1 bits (100), Expect = 0.003
Identities = 32/104 (30%), Positives = 51/104 (48%), Gaps = 3/104 (2%)
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIE 190
+G A NLG++Y GRG +Y KA F +A KG+V+ LG +Y G+ ++
Sbjct: 63 EGNITAQSNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGD---YVK 119
Query: 191 PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEE 234
+ ++AI ++ A + A L+ Y+ EK AEE
Sbjct: 120 QNTEQAIKLFERTAQAKDTDAMMMLSNIYRLQNQPEKIIGMAEE 163
>gb|AAM66151.1|AF326630_1 (AF326630) JHP1437-like protein [Helicobacter pylori]
Length = 255
Score = 58.9 bits (141), Expect = 5e-08
Identities = 33/93 (35%), Positives = 47/93 (50%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
K+ ++ +Y A + E L L+G Y +G GV KD KKA EY KA + + +G
Sbjct: 154 KKDKKDLEYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYA 213
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
L Y EG+GV K EK+ E + + G A
Sbjct: 214 LAAFYNEGKGVAKGEKQTTENLEKSCKLGLKEA 246
Score = 58.2 bits (139), Expect = 9e-08
Identities = 40/136 (29%), Positives = 58/136 (42%)
Query: 41 YNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG 100
+N + + A +Y + K +L Y + K +KK EY+ KA + +
Sbjct: 115 FNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKDLEYYSKACELNEALT 174
Query: 101 YNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATEC 160
+G Y++G GV KD KKA EY A E L Y EG+GV + TE
Sbjct: 175 CTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYALAAFYNEGKGVAKGEKQTTEN 234
Query: 161 FRKAMHKGNVEAYILL 176
K+ G EA +L
Sbjct: 235 LEKSCKLGLKEACDIL 250
Score = 57.8 bits (138), Expect = 1e-07
Identities = 63/239 (26%), Positives = 102/239 (42%), Gaps = 43/239 (17%)
Query: 11 ICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGI 70
+CL +LCL L AE + I+ G Y +K++ RA +++ A K + +L
Sbjct: 15 LCLGALCL-GGLMAE--PNPKELIFSGITIYTDKDFTRAKEYFEKACKLNDADGCTILRE 71
Query: 71 MYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATE 130
Y + + K A E +KA+++ K + ++ K + F
Sbjct: 72 AYS--KVILKGS--ARESIEKALEHTATA---------KACKSNDAEKCKDLAEF----- 113
Query: 131 KGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL-GI 189
Y NA ++ A E + K+ NVE +L Y ND + G+
Sbjct: 114 --YFNA---------------NDLKNALEYYSKSCKLNNVEGCMLSATFY---NDMIKGL 153
Query: 190 EPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
+ DK K + YY A +++ + + E Y+ G GV KD KKA EY KAC+ + K C
Sbjct: 154 KKDK-KDLEYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGC 211
>dbj|BAA23166.1| (D83080) mercuric resistance protein [Pseudomonas sp. K-62]
Length = 217
Score = 58.2 bits (139), Expect = 9e-08
Identities = 34/137 (24%), Positives = 70/137 (50%), Gaps = 9/137 (6%)
Query: 51 SFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV---- 106
S ++ + G+ +A ++G+ Y+ G GV ++ + ++F++A + NLG
Sbjct: 54 SDWEKKARAGDAMAQNIMGLAYKCGMGVKQNHAASIQWFRRAAEQGEADAQFNLGRLYGS 113
Query: 107 ----MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATECF 161
MYK GR P ++ +A +++R+A E+G+T A + L ++ +G + + V+A +
Sbjct: 114 EVDGMYKNGRAAPANDAEAFKWYRLAAEQGHTQAQVRLAQLFAKGLTDIAPDQVQAYQWM 173
Query: 162 RKAMHKGNVEAYILLGD 178
A G A ++ D
Sbjct: 174 SLAAASGEPTAAKVVAD 190
Score = 45.8 bits (107), Expect = 4e-04
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 140 LGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL----GIEPDKD- 194
+G+ Y G GV N+ + + FR+A +G +A LG +Y S D + P D
Sbjct: 71 MGLAYKCGMGVKQNHAASIQWFRRAAEQGEADAQFNLGRLYGSEVDGMYKNGRAAPANDA 130
Query: 195 KAIVYYKMAADMSSSRAYEGLAESYQYGL-GVEKDKKKAEEYMQKA 239
+A +Y++AA+ ++A LA+ + GL + D+ +A ++M A
Sbjct: 131 EAFKWYRLAAEQGHTQAQVRLAQLFAKGLTDIAPDQVQAYQWMSLA 176
>ref|NP_455032.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD08894.1| (AL627266) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 181
Score = 57.8 bits (138), Expect = 1e-07
Identities = 40/130 (30%), Positives = 68/130 (51%), Gaps = 8/130 (6%)
Query: 80 KDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRG----VPKDEKKAVEYFRIATEKGYTN 135
K + ++F+ A + + + LG +Y G G + D ++A +++ A+E+G ++
Sbjct: 23 KARPASLKWFRAAAEKGVVEAQSLLGGIYSGGEGDEWGIKPDIQEAQKWYGQASEQGDSD 82
Query: 136 AYINLGIMYMEGRGVPSNYVKATECFRKAMHKG-NVEAYILLGDIYYSGNDQLGIEPDKD 194
A I LG +Y G ++Y KA F + + G N + + L +YY+G LG PD D
Sbjct: 83 AQIALGKIYYSGATGRTDYAKALALFTQVENDGTNSRSTMPLSWMYYNG---LGTAPDCD 139
Query: 195 KAIVYYKMAA 204
KA YYK A+
Sbjct: 140 KAWSYYKKAS 149
>ref|NP_207316.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
pir||G64584 conserved hypothetical protein HP0519 - Helicobacter pylori
(strain 26695)
gb|AAD07587.1| (AE000566) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 276
Score = 57.8 bits (138), Expect = 1e-07
Identities = 57/243 (23%), Positives = 106/243 (43%), Gaps = 46/243 (18%)
Query: 30 KRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYF 89
K Y G + +N +Y++A ++ A + L V L MY G+GV D KKA Y
Sbjct: 49 KTYYFENGLDHFNQGQYQQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYA 108
Query: 90 QKAVDNDIPRGYNN--------LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN-- 139
+ A+ +GY + LG M EG G+ KD K+A++ +R + ++N N
Sbjct: 109 ENAI-----KGYGSGLLGGALILGRMQAEGLGMKKDLKQALKTYRHVV-RMFSNKSTNFA 162
Query: 140 ---------------LGIMYMEGRGVPSNYVKATECFRKAMHKG-NVEAYILLGDIYYSG 183
+G +++ G+ +N +K + F + K ++ LL +
Sbjct: 163 NNFRLPNLAEFTSMLIGSRFIDLSGLSANPIKFGKKFGILVKKSTQIKDKTLLWEDIAEI 222
Query: 184 NDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFD 243
+ + + + I+Y + +Y+ GLG K K +A++++QK+ +F
Sbjct: 223 SSNITLLKQQMGEILY--------------RIGIAYKEGLGTRKKKDRAKKFLQKSAEFG 268
Query: 244 IDK 246
+K
Sbjct: 269 YEK 271
>gb|EAA03532.1| (AAAB01008794) agCP14246 [Anopheles gambiae str. PEST]
Length = 443
Score = 57.4 bits (137), Expect = 1e-07
Identities = 37/105 (35%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
EY A S K + A LGI YE G G+PKD A E +Q A P+ N+
Sbjct: 301 EYASAVSHLKLGTSHQHAGAAFNLGICYEQGYGIPKDMAMALECYQLAAKQGHPQAIYNV 360
Query: 105 GVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR 148
GV + G G+ A +YF A E G +A + LG Y R
Sbjct: 361 GVFHARGFAGLRPSRSMAKKYFLAAAELGLQDAIVALGPKYRTSR 405
Score = 53.5 bits (127), Expect = 2e-06
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 121 AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY 180
AV + ++ T + A NLGI Y +G G+P + A EC++ A +G+ +A +G +
Sbjct: 305 AVSHLKLGTSHQHAGAAFNLGICYEQGYGIPKDMAMALECYQLAAKQGHPQAIYNVGVFH 364
Query: 181 YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQ 220
G G+ P + A Y+ AA++ A L Y+
Sbjct: 365 ARG--FAGLRPSRSMAKKYFLAAAELGLQDAIVALGPKYR 402
Score = 51.2 bits (121), Expect = 1e-05
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATECF 161
NLG+ Y++G G+PKD A+E +++A ++G+ A N+G+ + G G+ + A + F
Sbjct: 323 NLGICYEQGYGIPKDMAMALECYQLAAKQGHPQAIYNVGVFHARGFAGLRPSRSMAKKYF 382
Query: 162 RKAMHKGNVEAYILLGDIY 180
A G +A + LG Y
Sbjct: 383 LAAAELGLQDAIVALGPKY 401
>ref|NP_473246.1| (NC_000521) predicted using hexExon; MAL3P4.5 (PFC0550w),
Hypothetical protein, len: 808 aa [Plasmodium
falciparum]
pir||T18454 hypothetical protein C0550w - malaria parasite (Plasmodium
falciparum)
emb|CAA15596.1| (AL008970) hypothetical protein, PFC0550w [Plasmodium falciparum
3D7]
Length = 807
Score = 57.4 bits (137), Expect = 1e-07
Identities = 50/183 (27%), Positives = 80/183 (43%), Gaps = 7/183 (3%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E F IK G+ +A LG Y+ K+ K+A +Y +A + LG+
Sbjct: 436 EEILEFLNEQIKGGDVMAMYDLGKKYKE----EKNFKQAFKYINEASKKNNLLALKELGI 491
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
+Y G GV KD K++E F A E G + LG +Y G + + A H
Sbjct: 492 IYLYGYGVQKDINKSIENFSKAAEAGDVESKCYLGYIYYFIDGYKNLELSLKYLIEAASH 551
Query: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY--YKMAADMSSSRAYEGLAESYQYGLG 224
EA+ L +I + + D +V+ Y+ +AD+ +AY A+ Y+ G G
Sbjct: 552 DYG-EAFFFLAEIILDISMRKQYISDYVYEVVFKLYEHSADLGYVQAYFREAQLYEIGKG 610
Query: 225 VEK 227
V++
Sbjct: 611 VKQ 613
Score = 56.2 bits (134), Expect = 3e-07
Identities = 55/197 (27%), Positives = 86/197 (42%), Gaps = 21/197 (10%)
Query: 27 LEQKRNYIYKGEEAYNNKEYERAASFYKSA------IKNGEPLAYVLLGIMYENGRGVPK 80
+ K+N YK ++ Y N S Y + + NGE L M+ +
Sbjct: 381 INMKQN-CYKAKKLYKNVAENVMNSDYINIPLSELDLLNGENLN------MHNEINNMKN 433
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
+E++ E+ + + +LG YKE K+ K+A +Y A++K A L
Sbjct: 434 NEEEILEFLNEQIKGGDVMAMYDLGKKYKE----EKNFKQAFKYINEASKKNNLLALKEL 489
Query: 141 GIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYY 200
GI+Y+ G GV + K+ E F KA G+VE+ LG IYY + +E ++ Y
Sbjct: 490 GIIYLYGYGVQKDINKSIENFSKAAEAGDVESKCYLGYIYYFIDGYKNLE----LSLKYL 545
Query: 201 KMAADMSSSRAYEGLAE 217
AA A+ LAE
Sbjct: 546 IEAASHDYGEAFFFLAE 562
>gb|EAA08334.1| (AAAB01008879) agCP2877 [Anopheles gambiae str. PEST]
Length = 443
Score = 57.0 bits (136), Expect = 2e-07
Identities = 37/105 (35%), Positives = 47/105 (44%), Gaps = 1/105 (0%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
EY A S K + A LGI YE G G+PKD A E +Q A P+ N+
Sbjct: 301 EYASAVSHLKLGTSHQHAGAAFNLGICYEQGYGIPKDMAMAFECYQLAAKQGHPQAIYNV 360
Query: 105 GVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR 148
GV + G G+ A +YF A E G +A + LG Y R
Sbjct: 361 GVFHARGFAGLRPSRSMAKKYFLAAAELGLQDAIVALGPKYRTSR 405
Score = 53.1 bits (126), Expect = 3e-06
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 121 AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIY 180
AV + ++ T + A NLGI Y +G G+P + A EC++ A +G+ +A +G +
Sbjct: 305 AVSHLKLGTSHQHAGAAFNLGICYEQGYGIPKDMAMAFECYQLAAKQGHPQAIYNVGVFH 364
Query: 181 YSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQ 220
G G+ P + A Y+ AA++ A L Y+
Sbjct: 365 ARG--FAGLRPSRSMAKKYFLAAAELGLQDAIVALGPKYR 402
Score = 50.4 bits (119), Expect = 2e-05
Identities = 26/79 (32%), Positives = 44/79 (54%), Gaps = 1/79 (1%)
Query: 103 NLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATECF 161
NLG+ Y++G G+PKD A E +++A ++G+ A N+G+ + G G+ + A + F
Sbjct: 323 NLGICYEQGYGIPKDMAMAFECYQLAAKQGHPQAIYNVGVFHARGFAGLRPSRSMAKKYF 382
Query: 162 RKAMHKGNVEAYILLGDIY 180
A G +A + LG Y
Sbjct: 383 LAAAELGLQDAIVALGPKY 401
>pir||T38028 hypothetical protein SPAC1B3.10c - fission yeast
(Schizosaccharomyces pombe)
Length = 700
Score = 57.0 bits (136), Expect = 2e-07
Identities = 53/204 (25%), Positives = 88/204 (42%), Gaps = 30/204 (14%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
YE A + A ++Y L Y NG G + A+ Y++K V+ I ++
Sbjct: 426 YEEAYHLFLRAATQKSVISYKYLADCYYNGTGTSRSMISASLYYKKFVE-AIRASATSMA 484
Query: 106 VMYKEGRGVPKDE----KKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPS------NYV 155
+ +E DE + Y+ A + GY A IN + E + + + NY
Sbjct: 485 IALEE-----IDEYGYFHNSFVYYLYAAQMGYALAEINAAYLMDENKFLINSVFRYFNYT 539
Query: 156 K----------ATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
+ A E + +A +G+++A LGD YY G +G D KA YK+A +
Sbjct: 540 QSEQEAAHDKFAYEFYSRAAAQGDIDAIFKLGDYYYYG---IGTPKDYSKAYTCYKIAYE 596
Query: 206 MSS-SRAYEGLAESYQYGLGVEKD 228
SS +A ++YG+G ++D
Sbjct: 597 QSSIGMGLWNMAYMHEYGIGRDQD 620
>ref|NP_594794.1| (NC_003424) hypothetical protein [Schizosaccharomyces pombe]
emb|CAB11247.2| (Z98598) hypothetical protein [Schizosaccharomyces pombe]
Length = 680
Score = 57.0 bits (136), Expect = 2e-07
Identities = 53/204 (25%), Positives = 88/204 (42%), Gaps = 30/204 (14%)
Query: 46 YERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLG 105
YE A + A ++Y L Y NG G + A+ Y++K V+ I ++
Sbjct: 426 YEEAYHLFLRAATQKSVISYKYLADCYYNGTGTSRSMISASLYYKKFVE-AIRASATSMA 484
Query: 106 VMYKEGRGVPKDE----KKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPS------NYV 155
+ +E DE + Y+ A + GY A IN + E + + + NY
Sbjct: 485 IALEE-----IDEYGYFHNSFVYYLYAAQMGYALAEINAAYLMDENKFLINSVFRYFNYT 539
Query: 156 K----------ATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAAD 205
+ A E + +A +G+++A LGD YY G +G D KA YK+A +
Sbjct: 540 QSEQEAAHDKFAYEFYSRAAAQGDIDAIFKLGDYYYYG---IGTPKDYSKAYTCYKIAYE 596
Query: 206 MSS-SRAYEGLAESYQYGLGVEKD 228
SS +A ++YG+G ++D
Sbjct: 597 QSSIGMGLWNMAYMHEYGIGRDQD 620
>ref|NP_009492.1| (NC_001134) protoplast regeneration and killer toxin resistance
gene, may be a post-translational regulator of chitin
synthase III activity, interacts with Chs3p; Skt5p
[Saccharomyces cerevisiae]
sp|P34226|SKT5_YEAST SKT5 PROTEIN
pir||S39827 SKT5 protein - yeast (Saccharomyces cerevisiae)
emb|CAA80786.1| (Z23261) YBL0519 [Saccharomyces cerevisiae]
emb|CAA84882.1| (Z35823) ORF YBL061c [Saccharomyces cerevisiae]
Length = 696
Score = 56.6 bits (135), Expect = 3e-07
Identities = 58/218 (26%), Positives = 94/218 (42%), Gaps = 13/218 (5%)
Query: 40 AYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR 99
A+ E + A +++A K+G + E G G +D +K+ + + A + P
Sbjct: 285 AFGKIENKEAFVLFQAAAKHGHIESAYRASHCLEEGLGTTRDSRKSVNFLKFAASRNHPS 344
Query: 100 GYNNLGVMYKEGR-GVPKD---EKKAVEYFRIATEKGY---TNAYINLGIMYMEG--RGV 150
LG+ GR G+P D + V++ A + A L +Y EG V
Sbjct: 345 AMYKLGLYSFYGRMGLPTDVNTKLNGVKWLSRAAARANELTAAAPYELAKIYHEGFLDVV 404
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSR 210
+ A E + +A G+V + LL IY +GND +G D ++ YY AA S
Sbjct: 405 IPDEKYAMELYIQAASLGHVPSATLLAQIYETGNDTVG--QDTSLSVHYYTQAALKGDSV 462
Query: 211 AYEGLAESYQYGL--GVEKDKKKAEEYMQKACDFDIDK 246
A GL Y G EKD+ +A ++ +A + + K
Sbjct: 463 AMLGLCAWYLLGAEPAFEKDENEAFQWALRAANAGLPK 500
>prf||1920224A skt5 gene [Saccharomyces cerevisiae]
prf||2009318A SKT5 gene [Saccharomyces cerevisiae]
Length = 533
Score = 56.6 bits (135), Expect = 3e-07
Identities = 58/218 (26%), Positives = 94/218 (42%), Gaps = 13/218 (5%)
Query: 40 AYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR 99
A+ E + A +++A K+G + E G G +D +K+ + + A + P
Sbjct: 271 AFGKIENKEAFVLFQAAAKHGHIESAYRASHCLEEGLGTTRDSRKSVNFLKFAASRNHPS 330
Query: 100 GYNNLGVMYKEGR-GVPKD---EKKAVEYFRIATEKGY---TNAYINLGIMYMEG--RGV 150
LG+ GR G+P D + V++ A + A L +Y EG V
Sbjct: 331 AMYKLGLYSFYGRMGLPTDVNTKLNGVKWLSRAAARANELTAAAPYELAKIYHEGFLDVV 390
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSR 210
+ A E + +A G+V + LL IY +GND +G D ++ YY AA S
Sbjct: 391 IPDEKYAMELYIQAASLGHVPSATLLAQIYETGNDTVG--QDTSLSVHYYTQAALKGDSV 448
Query: 211 AYEGLAESYQYGL--GVEKDKKKAEEYMQKACDFDIDK 246
A GL Y G EKD+ +A ++ +A + + K
Sbjct: 449 AMLGLCAWYLLGAEPAFEKDENEAFQWALRAANAGLPK 486
>gb|AAL47063.1|AF326616_1 (AF326616) JHP1024-like protein [Helicobacter pylori]
Length = 122
Score = 55.8 bits (133), Expect = 4e-07
Identities = 38/98 (38%), Positives = 49/98 (49%), Gaps = 2/98 (2%)
Query: 61 EPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK 120
EP L + EN + KD KA +YF+KA + G NLG +Y G GV KD KK
Sbjct: 27 EPNPKELFDLGVENYKA--KDYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKK 84
Query: 121 AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKAT 158
A F A + + LG++Y G+GV N KAT
Sbjct: 85 AFALFEKACDLNNSGGCGTLGMLYEFGQGVEKNLTKAT 122
Score = 55.5 bits (132), Expect = 6e-07
Identities = 32/85 (37%), Positives = 47/85 (54%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G E Y K+Y +A +++ A + + LG +Y G GV KD KKA F+KA D +
Sbjct: 37 GVENYKAKDYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLN 96
Query: 97 IPRGYNNLGVMYKEGRGVPKDEKKA 121
G LG++Y+ G+GV K+ KA
Sbjct: 97 NSGGCGTLGMLYEFGQGVEKNLTKA 121
Score = 47.8 bits (112), Expect = 1e-04
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Query: 153 NYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAY 212
+Y+KA + F KA + LG +YY G G+E D KA ++ A D+++S
Sbjct: 45 DYIKAKKYFEKACELKDGGGCFNLGRLYYYGE---GVEKDFKKAFALFEKACDLNNSGGC 101
Query: 213 EGLAESYQYGLGVEKDKKKA 232
L Y++G GVEK+ KA
Sbjct: 102 GTLGMLYEFGQGVEKNLTKA 121
Score = 42.7 bits (99), Expect = 0.004
Identities = 25/66 (37%), Positives = 32/66 (47%), Gaps = 4/66 (6%)
Query: 187 LGIE----PDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDF 242
LG+E D KA Y++ A ++ L Y YG GVEKD KKA +KACD
Sbjct: 36 LGVENYKAKDYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDL 95
Query: 243 DIDKNC 248
+ C
Sbjct: 96 NNSGGC 101
>ref|NP_459434.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL19393.1| (AE008716) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 427
Score = 55.5 bits (132), Expect = 6e-07
Identities = 49/194 (25%), Positives = 88/194 (45%), Gaps = 16/194 (8%)
Query: 58 KNGEP-LAYV---LLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKE-GR 112
+ G+P +AY L+ +Y N D +A ++ + + + LG +Y+ G
Sbjct: 127 REGDPEVAYQTAKLVSTLYFNNETKTIDIAEALKWLRISAEKGDADSQTLLGFLYEHAGL 186
Query: 113 GVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEA 172
G+ D +KA +++ +A ++G A LG MY G V +Y KA F+KA K EA
Sbjct: 187 GLQPDGEKARKWYEMAAQQGNGEALYTLGRMYYSGVLVNVDYDKALYFFKKAYEKKLQEA 246
Query: 173 YILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKA 232
L +Y++G ++ D ++ YY +Y Y EKD+K+
Sbjct: 247 ADYLAQMYFNGQ---SVDVDCQQSWHYY--------DNSYIKKMTQRDYLDYCEKDRKRR 295
Query: 233 EEYMQKACDFDIDK 246
++ Q+ + ++K
Sbjct: 296 NDFNQQLPELTLEK 309
>ref|NP_459433.1| (NC_003197) putative periplasmic protein [Salmonella typhimurium
LT2]
gb|AAL19392.1| (AE008715) putative periplasmic protein [Salmonella typhimurium
LT2]
Length = 503
Score = 55.5 bits (132), Expect = 6e-07
Identities = 43/136 (31%), Positives = 71/136 (51%), Gaps = 9/136 (6%)
Query: 121 AVEYFRIATEKGYTNAYINLGIMYMEGR----GVPSNYVKATECFRKAMHKGNVEAYILL 176
++++FR A EKG A LG +Y G G+ + +A + + +A +G+ +A I L
Sbjct: 223 SLKWFRAAAEKGVVEAQSLLGGIYSGGEGDEWGIKPDIQEAQKWYGQAAKQGDSDAQIAL 282
Query: 177 GDIYYSGNDQLGIEPDKDKAI-VYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEY 235
G IYYSG D KA+ ++ ++ D ++SR+ L+ Y GLG D KA Y
Sbjct: 283 GKIYYSGATG---RTDYAKALALFTQVENDGTNSRSTMPLSWMYYNGLGTAPDCDKAWSY 339
Query: 236 MQKACDFDIDKNCKKK 251
+KA + + K ++K
Sbjct: 340 YKKASRY-VGKKVEEK 354
>ref|NP_283034.1| (NC_003116) hypothetical protein NMA0184 [Neisseria meningitidis
Z2491]
pir||F82012 hypothetical protein NMA0184 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB83499.1| (AL162752) hypothetical protein NMA0184 [Neisseria meningitidis
Z2491]
Length = 468
Score = 54.7 bits (130), Expect = 1e-06
Identities = 44/159 (27%), Positives = 68/159 (42%), Gaps = 8/159 (5%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
D + A E ++KA + LG +Y G GV + +A Y A + G+ A L
Sbjct: 148 DVETAIEQYEKAAALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLL 207
Query: 141 GIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYY 200
+ R +A E +R+A K EA L +G E D +A Y
Sbjct: 208 ADLLAAQRKP-----EALEWYRRAADKEQAEAQSKLAQYALTGELS---ERDPFQAARYA 259
Query: 201 KMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKA 239
K AA+ A + + + Y+YGLG++ D A +Y +A
Sbjct: 260 KAAAEKDHPEALKIMGDLYRYGLGIKADNHIAHDYYHRA 298
Score = 52.8 bits (125), Expect = 4e-06
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 8/127 (6%)
Query: 117 DEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILL 176
D + A+E + A G T A LG +Y G GV N+ +A A G++ A LL
Sbjct: 148 DVETAIEQYEKAAALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEPAAQAGHIAAQTLL 207
Query: 177 GDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYM 236
D+ + K +A+ +Y+ AAD + A LA+ G E+D +A Y
Sbjct: 208 ADLLAAQR--------KPEALEWYRRAADKEQAEAQSKLAQYALTGELSERDPFQAARYA 259
Query: 237 QKACDFD 243
+ A + D
Sbjct: 260 KAAAEKD 266
Score = 45.4 bits (106), Expect = 6e-04
Identities = 51/212 (24%), Positives = 78/212 (36%), Gaps = 40/212 (18%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNL 104
E+ R A+ + A + Y L G + E +D +AA Y + A + D P +
Sbjct: 221 EWYRRAADKEQAEAQSKLAQYALTGELSE------RDPFQAARYAKAAAEKDHPEALKIM 274
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKG-------------------------------Y 133
G +Y+ G G+ D A +Y+ A G
Sbjct: 275 GDLYRYGLGIKADNHIAHDYYHRAAALGSAAAAQKLISDAALYHPQQYEQIKTAALQQQQ 334
Query: 134 TNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDK 193
T L G P++Y A + + +A + A LG IY+ G LG D
Sbjct: 335 TETIYRLAEAQACAIGRPADYNAARKNYMEAAGFHHKNAAAALGRIYHYG---LGTAQDP 391
Query: 194 DKAIVYYKMAADMSSSRAYEGLAESYQYGLGV 225
A +Y +AA+ + A LA Y +G GV
Sbjct: 392 RAAAHWYAIAAEQNHPSAQYHLACFYYHGQGV 423
>ref|NP_253774.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||A83011 hypothetical protein PA5087 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG08472.1|AE004921_9 (AE004921) hypothetical protein [Pseudomonas aeruginosa]
Length = 289
Score = 54.3 bits (129), Expect = 1e-06
Identities = 43/170 (25%), Positives = 69/170 (40%), Gaps = 11/170 (6%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENG--RGVPKDEKKAAEYFQKAVDNDIPRGY 101
+ + R Y A++ G A L +Y G GV KD +KA + +QK +D D+P+G+
Sbjct: 56 RPWGRIVEIYSKAVERGHWKAMHNLANLYRTGWPGGVEKDPQKALDLYQKMIDLDVPQGF 115
Query: 102 NNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECF 161
++G M GV + + A G A LG +Y+ + C
Sbjct: 116 YDMGAMIGNRAGVKNPATDGLTFLDKAASLGNPPALTELGKLYIYVAKEKELGLAYASC- 174
Query: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRA 211
A +G A LG Y +E + KA+ YY+++ A
Sbjct: 175 --ASSQGYAPASYELGSYYEL------VENNYPKALSYYQVSVSQGGRSA 216
>gb|AAK54860.1| (AF304855) SEL1L [Rattus norvegicus]
Length = 151
Score = 53.9 bits (128), Expect = 2e-06
Identities = 39/165 (23%), Positives = 73/165 (43%), Gaps = 16/165 (9%)
Query: 38 EEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDI 97
E+A ++ + A + Y+S +K NG +++A Y QKA +
Sbjct: 1 EDAAKRRQMQEAEAIYQSGMK-------------ILNGSTRKNQKREAYRYLQKAAGMNH 47
Query: 98 PRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
+ + G + ++ + A E F TE+G LG +Y G GV S+ KA
Sbjct: 48 TKALERVSYALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLYASGLGVNSSQAKA 107
Query: 158 TECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKM 202
+ GN+ A+++LG Y++G +G+ + A+ +Y++
Sbjct: 108 LVYYTFGALGGNLIAHMVLGYRYWAG---IGVLQSCESALTHYRL 149
Score = 44.7 bits (104), Expect = 0.001
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 3/121 (2%)
Query: 105 GVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKA 164
G+ G +++A Y + A +T A + + G + N A E F K
Sbjct: 19 GMKILNGSTRKNQKREAYRYLQKAAGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKL 78
Query: 165 MHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLG 224
+G+ + LG +Y SG LG+ + KA+VYY A + A+ L Y G+G
Sbjct: 79 TEEGSPKGQTGLGFLYASG---LGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYWAGIG 135
Query: 225 V 225
V
Sbjct: 136 V 136
>ref|NP_531202.1| (NC_003304) conserved hypothetical protein [Agrobacterium tumefaciens
str. C58 (U. Washington)]
gb|AAL41518.1| (AE009019) conserved hypothetical protein [Agrobacterium tumefaciens
str. C58 (U. Washington)]
Length = 1248
Score = 53.9 bits (128), Expect = 2e-06
Identities = 34/124 (27%), Positives = 56/124 (44%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
AA +YK A G A L +YE GV ++ +A Y+ A + +NL V+
Sbjct: 1007 AAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTLAAEQGNAGAMHNLAVLL 1066
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
D + ++F A+E G ++ NL I+Y G GV + ++ + F A G
Sbjct: 1067 ASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILYARGSGVKQDIEESYKWFAIAAKDG 1126
Query: 169 NVEA 172
+ +A
Sbjct: 1127 DADA 1130
Score = 47.0 bits (110), Expect = 2e-04
Identities = 30/117 (25%), Positives = 54/117 (45%), Gaps = 3/117 (2%)
Query: 128 ATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL 187
A KG T A + Y +GRGV ++ +A + ++ A +G A L ++Y N
Sbjct: 978 AAAKGDTQALFEIAARYTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKAN--- 1034
Query: 188 GIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDI 244
G+E + +A YY +AA+ ++ A LA + D + ++ KA + +
Sbjct: 1035 GVERNLVEAKRYYTLAAEQGNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGV 1091
>ref|NP_592847.1| (NC_003424) similar to yeast protoplast regeneration and killer
toxin resistance protein [Schizosaccharomyces pombe]
sp|Q09897|YAIA_SCHPO Hypothetical protein C24B11.10c in chromosome I
pir||S62555 protoplast regeneration, killer toxin resistance protein homolog -
fission yeast (Schizosaccharomyces pombe)
pir||T38337 protoplast regeneration, killer toxin resistance protein homolog -
fission yeast (Schizosaccharomyces pombe)
emb|CAA91775.1| (Z67757) similar to yeast protoplast regeneration and killer toxin
resistance protein [Schizosaccharomyces pombe]
Length = 932
Score = 53.9 bits (128), Expect = 2e-06
Identities = 43/175 (24%), Positives = 70/175 (39%), Gaps = 4/175 (2%)
Query: 53 YKSAIKNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEG 111
Y S +N P A L+G + G G +D KA E + A P + V + G
Sbjct: 629 YPSKTQNTVPEALFLIGQFHSQGVLGFRRDLGKAFELYSLAAKKGHPLSNYRVAVCLQTG 688
Query: 112 RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR-GVPSNYVKATECFRKAMHKGNV 170
GV D K V ++ A E A + ++Y+ G G N + +A
Sbjct: 689 TGVKPDTSKCVAIYKKAAEMDVVEAMFRIALIYLNGLLGQKRNISLGVQWLERACKSKGP 748
Query: 171 EAYILLGDI--YYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGL 223
E+ + ++ Y D+ G+ ++ YK +A + A L E Y++GL
Sbjct: 749 ESVRAMYELAKIYEQPDRYGVSATPERKFELYKQSAVYGYAAAQCKLGECYEHGL 803
Score = 50.8 bits (120), Expect = 1e-05
Identities = 45/185 (24%), Positives = 78/185 (41%), Gaps = 8/185 (4%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
++ +A Y A K G PL+ + + + G GV D K ++KA + D+
Sbjct: 657 RDLGKAFELYSLAAKKGHPLSNYRVAVCLQTGTGVKPDTSKCVAIYKKAAEMDVVEAMFR 716
Query: 104 LGVMYKEG-RGVPKDEKKAVEYF-RIATEKG--YTNAYINLGIMY--MEGRGVPSNYVKA 157
+ ++Y G G ++ V++ R KG A L +Y + GV + +
Sbjct: 717 IALIYLNGLLGQKRNISLGVQWLERACKSKGPESVRAMYELAKIYEQPDRYGVSATPERK 776
Query: 158 TECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAE 217
E ++++ G A LG+ Y G LG + ++I +Y AA+ A GL+
Sbjct: 777 FELYKQSAVYGYAAAQCKLGECYEHG--LLGCLAEPRRSIFWYTRAAEQDYGEAELGLSG 834
Query: 218 SYQYG 222
Y G
Sbjct: 835 WYLTG 839
Score = 43.1 bits (100), Expect = 0.003
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 89 FQKAVDNDIPRGYNNLGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG 147
+ N +P +G + +G G +D KA E + +A +KG+ + + + G
Sbjct: 629 YPSKTQNTVPEALFLIGQFHSQGVLGFRRDLGKAFELYSLAAKKGHPLSNYRVAVCLQTG 688
Query: 148 RGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADM- 206
GV + K ++KA VEA + IY +G LG + + + + + A
Sbjct: 689 TGVKPDTSKCVAIYKKAAEMDVVEAMFRIALIYLNG--LLGQKRNISLGVQWLERACKSK 746
Query: 207 --SSSRAYEGLAESYQ----YGLGVEKDKKKAEEYMQKA 239
S RA LA+ Y+ YG+ + +K E Y Q A
Sbjct: 747 GPESVRAMYELAKIYEQPDRYGVSATPE-RKFELYKQSA 784
>ref|NP_585979.1| (NC_003234) similarity to HYPOTHETICAL PROTEIN YBET_ECOLI
[Encephalitozoon cuniculi]
emb|CAD25583.1| (AL590447) similarity to HYPOTHETICAL PROTEIN YBET_ECOLI
[Encephalitozoon cuniculi]
Length = 458
Score = 53.9 bits (128), Expect = 2e-06
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 6/180 (3%)
Query: 68 LGIMYENGR-GVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFR 126
LG+ +E G GV + ++A E++ A P G + Y++G G ++ + A+ ++R
Sbjct: 164 LGLSHEKGLFGVRRSHRRAFEHYIIAAQLGSPAGTFRVAQCYEKGIGKKRNMRNALHFYR 223
Query: 127 IATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYIL----LGDIYYS 182
A + G A G++ + G ++ + + K AY LG Y
Sbjct: 224 CAAKLGLVEAMHTYGVIILFGEVGDGTDLEIGVFYLRLAAKKATHAYPYALYDLGRCYEG 283
Query: 183 GNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG-LGVEKDKKKAEEYMQKACD 241
G I PD A Y A + +A + G +G EKD +A E+ KA D
Sbjct: 284 GKGPDIISPDDSYAFKLYLKGASLDCPNCQFRVARCLEAGEMGQEKDVARAVEWYAKATD 343
Score = 51.2 bits (121), Expect = 1e-05
Identities = 37/128 (28%), Positives = 58/128 (44%), Gaps = 6/128 (4%)
Query: 62 PLAYVLLGIMYENGRG---VPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGR-GVPKD 117
P A LG YE G+G + D+ A + + K D P + + G G KD
Sbjct: 271 PYALYDLGRCYEGGKGPDIISPDDSYAFKLYLKGASLDCPNCQFRVARCLEAGEMGQEKD 330
Query: 118 EKKAVEYFRIATEKGYTNAYINLGIMYMEG--RGVPSNYVKATECFRKAMHKGNVEAYIL 175
+AVE++ AT+ G ++A + L ++++ G V NY KA + N+ A L
Sbjct: 331 VARAVEWYAKATDLGQSDAQLRLSVLFLNGLENVVERNYKLGFRLGLKAAARENISAAYL 390
Query: 176 LGDIYYSG 183
+ D Y G
Sbjct: 391 VSDCYEQG 398
Score = 42.4 bits (98), Expect = 0.005
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 9/187 (4%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+ + RA Y A + G P + YE G G ++ + A +++ A + +
Sbjct: 177 RSHRRAFEHYIIAAQLGSPAGTFRVAQCYEKGIGKKRNMRNALHFYRCAAKLGLVEAMHT 236
Query: 104 LGVMYKEGR-GVPKDEKKAVEYFRIATEK---GYTNAYINLGIMYMEGRG---VPSNYVK 156
GV+ G G D + V Y R+A +K Y A +LG Y G+G + +
Sbjct: 237 YGVIILFGEVGDGTDLEIGVFYLRLAAKKATHAYPYALYDLGRCYEGGKGPDIISPDDSY 296
Query: 157 ATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLA 216
A + + K + +G ++G E D +A+ +Y A D+ S A L+
Sbjct: 297 AFKLYLKGASLDCPNCQFRVARCLEAG--EMGQEKDVARAVEWYAKATDLGQSDAQLRLS 354
Query: 217 ESYQYGL 223
+ GL
Sbjct: 355 VLFLNGL 361
>ref|NP_353527.1| (NC_003062) AGR_C_883p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK86312.1| (AE007985) AGR_C_883p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 1214
Score = 53.9 bits (128), Expect = 2e-06
Identities = 34/124 (27%), Positives = 56/124 (44%)
Query: 49 AASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMY 108
AA +YK A G A L +YE GV ++ +A Y+ A + +NL V+
Sbjct: 973 AAKWYKMAADRGLAPAQYRLANLYEKANGVERNLVEAKRYYTLAAEQGNAGAMHNLAVLL 1032
Query: 109 KEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKG 168
D + ++F A+E G ++ NL I+Y G GV + ++ + F A G
Sbjct: 1033 ASDAAGQPDFATSAQWFIKASELGVRDSQFNLAILYARGSGVKQDIEESYKWFAIAAKDG 1092
Query: 169 NVEA 172
+ +A
Sbjct: 1093 DADA 1096
Score = 47.0 bits (110), Expect = 2e-04
Identities = 30/117 (25%), Positives = 54/117 (45%), Gaps = 3/117 (2%)
Query: 128 ATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQL 187
A KG T A + Y +GRGV ++ +A + ++ A +G A L ++Y N
Sbjct: 944 AAAKGDTQALFEIAARYTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKAN--- 1000
Query: 188 GIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDI 244
G+E + +A YY +AA+ ++ A LA + D + ++ KA + +
Sbjct: 1001 GVERNLVEAKRYYTLAAEQGNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGV 1057
>gb|AAC60564.1| (S65415) protoplast regeneration and killer toxin resistance gene
[Saccharomyces cerevisiae]
Length = 664
Score = 53.5 bits (127), Expect = 2e-06
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 13/218 (5%)
Query: 40 AYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR 99
A+ E + A +++A K+G + E G G +D +K+ + + A + P
Sbjct: 271 AFGKIENKEAFVLFQAAAKHGHIESAYRASHCLEEGLGTTRDSRKSVNFLKFAASRNHPS 330
Query: 100 GYNNLGVMYKEGR-GVPKD---EKKAVEYFRIATEKGY---TNAYINLGIMYMEG--RGV 150
L + GR G+P D + V++ A + A L +Y EG V
Sbjct: 331 AMYKLELYSFYGRMGLPTDVNTKLNGVKWLSRAAARANELTAAAPYELAKIYHEGFLDVV 390
Query: 151 PSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSR 210
+ A E + +A G+V + LL IY +GND +G D ++ YY AA S
Sbjct: 391 IPDEKYAMELYIQAASLGHVPSATLLAQIYETGNDTVG--QDTSLSVHYYTQAALKGDSV 448
Query: 211 AYEGLAESYQYGL--GVEKDKKKAEEYMQKACDFDIDK 246
A GL Y G EKD+ +A ++ +A + + K
Sbjct: 449 AMLGLCAWYLLGAEPAFEKDENEAFQWALRAANAGLPK 486
>ref|NP_540011.1| (NC_003317) EXOPOLYSACCHARIDE PRODUCTION NEGATIVE REGULATOR
PRECURSOR [Brucella melitensis]
gb|AAL52275.1| (AE009549) EXOPOLYSACCHARIDE PRODUCTION NEGATIVE REGULATOR
PRECURSOR [Brucella melitensis]
Length = 267
Score = 53.1 bits (126), Expect = 3e-06
Identities = 44/159 (27%), Positives = 66/159 (40%), Gaps = 14/159 (8%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G AY N + A + A + G A L MY G GV +D+ +A + F+K V
Sbjct: 50 GFSAYKNGHKDEAIKALRYAAERGHQGAKWKLARMYAEGDGVAEDDYEAYKIFEKIVREG 109
Query: 97 IPRGYNN--------LGVMYKEGRGVPKDEKKAVE------YFRIATEKGYTNAYINLGI 142
G N + + G+P +A Y + A G + A LG
Sbjct: 110 SEPGSENAPYVADALVALAGYVKNGIPGSPVQANPNMARELYVQAAANFGDSIAQFELGK 169
Query: 143 MYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYY 181
M ++G G N V+A F+ A KGN A +LG++ +
Sbjct: 170 MLLDGEGGERNAVQAARWFQLAARKGNTGAQAMLGNMLF 208
>ref|NP_384642.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC45108.1| (AL591784) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 229
Score = 53.1 bits (126), Expect = 3e-06
Identities = 32/105 (30%), Positives = 48/105 (45%)
Query: 68 LGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRI 127
L +YE G GV +D KA + KA +NL VM GR D +A ++F
Sbjct: 8 LANLYEKGAGVQRDAAKAKALYLKAAAAGNASAIHNLAVMLAGGRDGAPDLAEAAKWFEK 67
Query: 128 ATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEA 172
A G ++ NL ++Y G G+ N + + F A G+ +A
Sbjct: 68 AANLGVRDSQFNLAVLYARGDGLARNLEDSYKWFAIAARDGDKDA 112
Score = 44.7 bits (104), Expect = 0.001
Identities = 26/93 (27%), Positives = 46/93 (48%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
++ +A + Y A G A L +M GR D +AA++F+KA + + N
Sbjct: 20 RDAAKAKALYLKAAAAGNASAIHNLAVMLAGGRDGAPDLAEAAKWFEKAANLGVRDSQFN 79
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
L V+Y G G+ ++ + + ++F IA G +A
Sbjct: 80 LAVLYARGDGLARNLEDSYKWFAIAARDGDKDA 112
>ref|NP_253775.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||B83011 hypothetical protein PA5088 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG08473.1|AE004921_10 (AE004921) hypothetical protein [Pseudomonas aeruginosa]
Length = 293
Score = 53.1 bits (126), Expect = 3e-06
Identities = 45/170 (26%), Positives = 71/170 (41%), Gaps = 11/170 (6%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENG--RGVPKDEKKAAEYFQKAVDNDIPRGY 101
+ ++R Y A++ G A L +Y G GV KD +KA + +QK +D +P+G+
Sbjct: 60 RPWDRIVDLYSKAVERGHWKAMHNLASLYRTGWPGGVEKDTQKALDLYQKMIDLKVPQGF 119
Query: 102 NNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECF 161
++ M GV + + A G A LG +Y+ G +K T C
Sbjct: 120 YDMAAMIGNRAGVKNPATDGLTFLDKAASLGNPPALTELGRLYIYVAGQDELGLKYTNC- 178
Query: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRA 211
A +G A L +YY + + KA YY +AA + A
Sbjct: 179 --AAGQGYAPANYELA-MYYR-----LVAHNYPKAAGYYLLAASQGNDDA 220
>emb|CAA67370.1| (X98863) AlgK protein [Azotobacter vinelandii]
Length = 460
Score = 52.8 bits (125), Expect = 4e-06
Identities = 39/119 (32%), Positives = 60/119 (49%), Gaps = 1/119 (0%)
Query: 61 EPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKK 120
+P A +LLG +Y G+ +P+D KA EYF KA + Y LG +Y+ G +K
Sbjct: 304 QPAADLLLGRLYYEGKLLPQDPFKAEEYFIKARATENSAHY-YLGQIYRRGFLGEVYPQK 362
Query: 121 AVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDI 179
AV+ A G +A L +Y +GRG+ + A R A+ +G ++ LL +I
Sbjct: 363 AVDSLLTAARGGQASADYALAQLYSQGRGIRIDLANAYVFARLAVLQGRPDSEPLLQEI 421
>ref|NP_281603.1| (NC_002163) putative periplasmic protein [Campylobacter jejuni]
pir||C81385 probable periplasmic protein Cj0413 [imported] - Campylobacter
jejuni (strain NCTC 11168)
emb|CAB74249.1| (AL139075) putative periplasmic protein [Campylobacter jejuni]
Length = 234
Score = 52.0 bits (123), Expect = 6e-06
Identities = 46/213 (21%), Positives = 93/213 (43%), Gaps = 14/213 (6%)
Query: 36 KGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDN 95
+G + Y ++++A +KS + A L M+E+ RGV KD +A +++ KA
Sbjct: 22 EGLKLYEANKFDKAYEIFKSLCEKDISKACFSLAFMHESARGVSKDLNQAYKFYDKACKL 81
Query: 96 DIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYV 155
+ +N+ ++ + +G E +A+ F A G + + N+ + Y + + +
Sbjct: 82 GLANACSNMALLL-QNQGY---ENEALLAFNKACTLGESLSCNNIALFYEKEK----DGQ 133
Query: 156 KATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGL 215
A+ ++++ N A LG +Y G ++ A+ +Y + + A L
Sbjct: 134 MASSFYKRSCDLKNARACYQLGSLYDKGE---LVKASVKSALAFYSKSCTLGFGEACYLL 190
Query: 216 AESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
+Y ++D KA+ Y ACD + C
Sbjct: 191 G---RYNQLEKQDLTKAKRYFGMACDQKHQEAC 220
>ref|NP_585810.1| (NC_003233) putative SKT5-like protein [Encephalitozoon cuniculi]
emb|CAD25414.1| (AL590446) putative SKT5-like protein [Encephalitozoon cuniculi]
Length = 388
Score = 52.0 bits (123), Expect = 6e-06
Identities = 44/182 (24%), Positives = 79/182 (43%), Gaps = 6/182 (3%)
Query: 64 AYVLLGIMYENGR-GVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAV 122
A +G+ YE G G+ KD + A Y+ A + P G +G ++G G P++ + A+
Sbjct: 98 AQTYMGLGYEFGLFGLRKDGRMAIGYYSSAARQNHPVGTFRMGQCLEKGIGKPRNHRHAL 157
Query: 123 EYFRIATEKGYTNAYINLGIMYMEGR-GVPSNYVKATECFRKAMHKGNVE---AYILLGD 178
+++R + + G+ G + + G G + + A K + E Y L
Sbjct: 158 DFYRCSAKLGFVVGMHAYGSILINGDIGSKKDLQSGLFYLKLAARKASKEYPYPYYDLAQ 217
Query: 179 IYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG-LGVEKDKKKAEEYMQ 237
Y S I+PD + A Y A++ +A Y+ G L +K+ A E+ +
Sbjct: 218 TYESSTAPSEIQPDDEYAFRMYLRGAELDCPNCQYRVARCYELGELMQDKNLPVAVEWYR 277
Query: 238 KA 239
+A
Sbjct: 278 RA 279
>ref|NP_207134.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||H64561 invalid gene - Helicobacter pylori (strain 26695)
gb|AAD07408.1| (AE000551) H. pylori predicted coding region HP0336 [Helicobacter
pylori 26695]
Length = 138
Score = 51.2 bits (121), Expect = 1e-05
Identities = 30/69 (43%), Positives = 40/69 (57%)
Query: 68 LGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRI 127
LG YENG+ V KD +KAA+Y+ KA + G LG G+GV K+EK+AV+ F
Sbjct: 63 LGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEK 122
Query: 128 ATEKGYTNA 136
A G +A
Sbjct: 123 ACRLGSEDA 131
Score = 48.5 bits (114), Expect = 7e-05
Identities = 29/98 (29%), Positives = 49/98 (49%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
+++K +Y KA + + G LG Y+ G+ V KD +KA +Y+ A + + L
Sbjct: 40 NKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLIL 99
Query: 141 GIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGD 178
G G+GV N +A + F KA G+ +A +L +
Sbjct: 100 GYKQYAGKGVVKNEKQAVKTFEKACRLGSEDACGILNN 137
>ref|NP_252667.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||S57899 hypothetical protein 1 - Pseudomonas aeruginosa
pir||D83147 hypothetical protein PA3978 [imported] - Pseudomonas aeruginosa
(strain PAO1)
emb|CAA57576.1| (X82072) orf1 [Pseudomonas aeruginosa]
gb|AAG07365.1|AE004816_1 (AE004816) hypothetical protein [Pseudomonas aeruginosa]
Length = 182
Score = 51.2 bits (121), Expect = 1e-05
Identities = 27/95 (28%), Positives = 49/95 (51%)
Query: 78 VPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAY 137
VP++ ++A Q+ + LG + +G +P+D + A+ +F A+ +G+ A
Sbjct: 41 VPEELQQALAACQQVANGGDAEAQYELGEFFYDGERIPRDLQAALNWFEKASLQGHAQAQ 100
Query: 138 INLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEA 172
+LG M+ G GVP+N V+A + A G +A
Sbjct: 101 YHLGTMFFRGEGVPANNVQAYIVLKMAAVNGAEDA 135
Score = 42.4 bits (98), Expect = 0.005
Identities = 24/93 (25%), Positives = 45/93 (47%)
Query: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
+E ++A + + G+ A LG + +G +P+D + A +F+KA + +
Sbjct: 43 EELQQALAACQQVANGGDAEAQYELGEFFYDGERIPRDLQAALNWFEKASLQGHAQAQYH 102
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
LG M+ G GVP + +A ++A G +A
Sbjct: 103 LGTMFFRGEGVPANNVQAYIVLKMAAVNGAEDA 135
>ref|NP_253773.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||H83010 hypothetical protein PA5086 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG08471.1|AE004921_8 (AE004921) hypothetical protein [Pseudomonas aeruginosa]
Length = 213
Score = 50.4 bits (119), Expect = 2e-05
Identities = 40/146 (27%), Positives = 61/146 (41%), Gaps = 11/146 (7%)
Query: 68 LGIMYENG--RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYF 125
L +Y G GV KD +KA + +QK +D D+P+G+ ++G M GV + +
Sbjct: 4 LANLYRTGWPGGVEKDTQKALDLYQKMIDLDVPQGFYDMGAMIGNRAGVKNPATDGLTFL 63
Query: 126 RIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGND 185
A G A LG Y+ + T C A +G A LG Y
Sbjct: 64 DKAASLGNPPALTELGKFYIYVAKKKDLGLAYTHC---AASQGYAPASYELGAYYKI--- 117
Query: 186 QLGIEPDKDKAIVYYKMAADMSSSRA 211
+E + KA+VYY+++ A
Sbjct: 118 ---VEHNFPKALVYYQVSVSQGGKSA 140
>ref|NP_354703.1| (NC_003062) AGR_C_3152p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_532399.1| (NC_003304) exopolysaccharide production negative regulator
[Agrobacterium tumefaciens str. C58 (U. Washington)]
gb|AAK87488.1| (AE008093) AGR_C_3152p [Agrobacterium tumefaciens str. C58
(Cereon)]
gb|AAL42715.1| (AE009128) exopolysaccharide production negative regulator
[Agrobacterium tumefaciens str. C58 (U. Washington)]
Length = 264
Score = 50.1 bits (118), Expect = 2e-05
Identities = 43/143 (30%), Positives = 69/143 (48%), Gaps = 16/143 (11%)
Query: 108 YKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHK 167
YK G KDE AVE +R A EKG+T + L MY G GV N ++A + + + +
Sbjct: 51 YKNGN---KDE--AVEAYRYAAEKGHTGSRWALANMYAYGDGVAKNDLEAFKIYSEIASQ 105
Query: 168 G----------NVEAYILLGDIYYSGNDQLGIEPDKDKA-IVYYKMAADMSSSRAYEGLA 216
G V A + L D Y G ++ D +A +Y+++A+ + A LA
Sbjct: 106 GVEPGSEDTGFFVNALLSLADYYRHGIPGSPVKMDLSQARQLYFQVASTFGVAEAQFRLA 165
Query: 217 ESYQYGLGVEKDKKKAEEYMQKA 239
E G G D ++A++++ +A
Sbjct: 166 EMILAGEGGRADVQQAKKWLNQA 188
Score = 45.8 bits (107), Expect = 4e-04
Identities = 36/159 (22%), Positives = 65/159 (40%), Gaps = 14/159 (8%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G +AY N + A Y+ A + G + L MY G GV K++ +A + + +
Sbjct: 47 GFKAYKNGNKDEAVEAYRYAAEKGHTGSRWALANMYAYGDGVAKNDLEAFKIYSEIASQG 106
Query: 97 IPRGYNNLGVMYK-------------EGRGVPKDEKKAVE-YFRIATEKGYTNAYINLGI 142
+ G + G G V D +A + YF++A+ G A L
Sbjct: 107 VEPGSEDTGFFVNALLSLADYYRHGIPGSPVKMDLSQARQLYFQVASTFGVAEAQFRLAE 166
Query: 143 MYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYY 181
M + G G ++ +A + +A G+ A + G++ +
Sbjct: 167 MILAGEGGRADVQQAKKWLNQARKHGHAGAMSIFGNLIF 205
>sp|Q52822|EXOR_RHILV EXOPOLYSACCHARIDE PRODUCTION NEGATIVE REGULATOR PRECURSOR
gb|AAB63941.1| (L39937) exoR [Rhizobium leguminosarum]
Length = 267
Score = 49.7 bits (117), Expect = 3e-05
Identities = 48/191 (25%), Positives = 83/191 (43%), Gaps = 16/191 (8%)
Query: 7 LALKICLASLC-LFSALGAEHLEQKRNYIYK-GEEAYNNKEYERAASFYKSAIKNGEPLA 64
+A+ + L+ C F G E ++K G +AY N + E A Y+ A + G +
Sbjct: 18 IAVALALSGPCRAFDIKGGVSKESGPFDLFKFGFKAYKNGQKEEAVEAYRYAAEKGHTGS 77
Query: 65 YVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVM----------YKEG-RG 113
L MY +G GV +D+ +A + + + + G + G YK G G
Sbjct: 78 RWALANMYADGDGVTQDDFEAFKIYSEIAQQGVEPGSEDTGFFVNALLSLANYYKHGIAG 137
Query: 114 VPK--DEKKAVE-YFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNV 170
P D +A + YF++A+ G A L M + G G ++ +A + +A G+
Sbjct: 138 SPVRIDLSQARQLYFQVASTFGVPEAQFQLAQMMLAGEGGNASPQQAKKWLNQARKSGHP 197
Query: 171 EAYILLGDIYY 181
A + G+I +
Sbjct: 198 GAMAVFGNILF 208
>ref|NP_421280.1| (NC_002696) hypothetical protein [Caulobacter crescentus CB15]
gb|AAK24448.1| (AE005916) hypothetical protein [Caulobacter crescentus CB15]
Length = 533
Score = 49.7 bits (117), Expect = 3e-05
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 111 GRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNV 170
GR P ++ +AV+Y A G + A + L +MY EG GVP +Y +A + +A +G+
Sbjct: 374 GRLAPIEKVRAVQY---AAVNGSSKAQLVLAVMYSEGVGVPRDYARAYHWYEEAERQGSA 430
Query: 171 EAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
EA + + G + + D+ KA+VY
Sbjct: 431 EAKYAMSTFFSLGLQGVA-DQDRAKAVVY 458
>ref|NP_596099.1| (NC_003423) very putative chitin synthase regulatory factor
[Schizosaccharomyces pombe]
pir||T40386 hypothetical protein SPBC3E7.12c - fission yeast
(Schizosaccharomyces pombe)
emb|CAA19015.1| (AL023534) very putative chitin synthase regulatory factor
[Schizosaccharomyces pombe]
Length = 456
Score = 48.9 bits (115), Expect = 5e-05
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 3/131 (2%)
Query: 104 LGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGR-GVPSNYVKATECFR 162
L +YK+ RG +D K + + +A G+ + +G + G G N ++A + +
Sbjct: 299 LAELYKQ-RGTSQDLKSILPLYMLAASLGHDRSSFLVGEAFFYGTYGARENKLRALQYYH 357
Query: 163 KAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG 222
A KGN +A + L +Y G I P +A Y AA + + A L + Y+ G
Sbjct: 358 LANDKGNADAMLALCKLYLRGLPG-HIFPSSRRAFEYAHRAAMLGHAPACYVLGKFYETG 416
Query: 223 LGVEKDKKKAE 233
+G KD K+E
Sbjct: 417 VGCVKDLAKSE 427
>ref|NP_361071.1| (NC_003122) MerG protein [Plasmid pSB102]
emb|CAC79202.1| (AJ304453) MerG protein [Plasmid pSB102]
Length = 212
Score = 47.8 bits (112), Expect = 1e-04
Identities = 30/108 (27%), Positives = 54/108 (49%), Gaps = 11/108 (10%)
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMY- 144
+E+ +KA + P N G+ YK G GV +D+ + ++FR A E+G +A NL +Y
Sbjct: 46 SEWERKATAGE-PIAQNVTGMAYKYGIGVAQDQAVSWKWFRSAAEQGEADAQFNLARIYE 104
Query: 145 ---------MEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSG 183
R VP++ +A +R++ + + +A + L +Y G
Sbjct: 105 GHANDTFYRRHARPVPADDSEAVNWYRRSAEQNHTQAQVKLAQLYAKG 152
>gb|AAH15313.1|AAH15313 (BC015313) hypothetical protein FLJ12439 [Homo sapiens]
Length = 231
Score = 47.0 bits (110), Expect = 2e-04
Identities = 51/205 (24%), Positives = 81/205 (38%), Gaps = 48/205 (23%)
Query: 44 KEYERAASFYK-SAIKNGEPLAYVLLGIMYENGRG-VPKDEKKAAEYFQKAVDNDIPRGY 101
K ++ AA K + +N + LG Y G+G + +D K AA F A + +
Sbjct: 49 KNFDEAAKVLKFNCEENQHSDSCYKLGAYYVTGKGGLTQDLKAAARCFLMACEKPGKKSI 108
Query: 102 ---NNLGVMYKEGR----GVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNY 154
+N+G++ +G+ G P D KA +Y+ A + GYT++ NL M+++G
Sbjct: 109 AACHNVGLLAHDGQVNEDGQP-DLGKARDYYTRACDGGYTSSCFNLSAMFLQGAP----- 162
Query: 155 VKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEG 214
G D D A Y A D+ A
Sbjct: 163 ---------------------------------GFPKDMDLACKYSMKACDLGHIWACAN 189
Query: 215 LAESYQYGLGVEKDKKKAEEYMQKA 239
+ Y+ G GV+KD+ KAE +A
Sbjct: 190 ASRMYKLGDGVDKDEAKAEVLKNRA 214
>ref|NP_385624.1| (NC_003047) EXOPOLYSACCHARIDE BIOSYNTHESIS REGULATORY PROTEIN
[Sinorhizobium meliloti]
sp|Q52926|EXOR_RHIME Exopolysaccharide production negative regulator precursor
pir||A39438 exopolysaccharide regulatory protein exoR - Rhizobium meliloti
gb|AAA26260.1| (M61752) exoR [Sinorhizobium meliloti]
emb|CAC46097.1| (AL591787) EXOPOLYSACCHARIDE BIOSYNTHESIS REGULATORY PROTEIN
[Sinorhizobium meliloti]
Length = 268
Score = 47.0 bits (110), Expect = 2e-04
Identities = 42/143 (29%), Positives = 66/143 (45%), Gaps = 16/143 (11%)
Query: 108 YKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHK 167
YK GR KDE AVE +R A EKG+T + L MY G GV N ++A + + + +
Sbjct: 54 YKSGR---KDE--AVEAYRYAAEKGHTGSRWALANMYAYGDGVAENDLEAFKIYSEIAQQ 108
Query: 168 G----------NVEAYILLGDIYYSGNDQLGIEPDKDKA-IVYYKMAADMSSSRAYEGLA 216
G V A I L Y G + D +A +Y++ A+ + A LA
Sbjct: 109 GVEPGSEDTGYFVNALISLAGYYRRGIPDTPVRSDLSQARQLYFQAASTFGVAEAQFQLA 168
Query: 217 ESYQYGLGVEKDKKKAEEYMQKA 239
G G + ++A++++ +A
Sbjct: 169 RMLLSGEGGSVNVQQAKKWLNRA 191
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/212 (21%), Positives = 80/212 (37%), Gaps = 23/212 (10%)
Query: 37 GEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND 96
G AY + + A Y+ A + G + L MY G GV +++ +A + + +
Sbjct: 50 GFSAYKSGRKDEAVEAYRYAAEKGHTGSRWALANMYAYGDGVAENDLEAFKIYSEIAQQG 109
Query: 97 IPRGYNNLGVMYKE--------GRGVP-----KDEKKAVE-YFRIATEKGYTNAYINLGI 142
+ G + G RG+P D +A + YF+ A+ G A L
Sbjct: 110 VEPGSEDTGYFVNALISLAGYYRRGIPDTPVRSDLSQARQLYFQAASTFGVAEAQFQLAR 169
Query: 143 MYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKM 202
M + G G N +A + +A G+ A + G++ + E + + Y
Sbjct: 170 MLLSGEGGSVNVQQAKKWLNRARKNGHAGAMGVFGNVIFQ-------EGQTARGLAYMTA 222
Query: 203 AADMSS--SRAYEGLAESYQYGLGVEKDKKKA 232
A S R + + + L E D++ A
Sbjct: 223 ALGQCSPKDRPWLQAMQEQAFSLATEDDRRVA 254
>ref|NP_013308.1| (NC_001144) HMG-CoA Reductase Degradation; Hrd3p [Saccharomyces
cerevisiae]
pir||S48558 probable membrane protein YLR207w - yeast (Saccharomyces
cerevisiae)
gb|AAB67427.1| (U14913) Ylr207wp [Saccharomyces cerevisiae]
Length = 833
Score = 46.6 bits (109), Expect = 3e-04
Identities = 47/202 (23%), Positives = 83/202 (40%), Gaps = 25/202 (12%)
Query: 54 KSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDND----IPRGYNNLGVMYK 109
++A NG A +M E+G + A F+ VD + P+ +
Sbjct: 474 ETAYLNGFIPAIYEFAVMIESGMNSKSSVENTAYLFKTFVDKNEAIMAPKLRTAFAALIN 533
Query: 110 EGRGVPKDEKKAVEYFRIATEKGYTNAYINLG-IMYM-------EGRGVPSNYVKATECF 161
+ + E Y ++A E+GY A ++ +MY R A +
Sbjct: 534 D-----RSEVALWAYSQLA-EQGYETAQVSAAYLMYQLPYEFEDPPRTTDQRKTLAISYY 587
Query: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQY 221
+A +GN++A ++ GDIY+ + KA+ Y+ AA S +A L +++
Sbjct: 588 TRAFKQGNIDAGVVAGDIYFQMQNY-------SKAMALYQGAALKYSIQAIWNLGYMHEH 640
Query: 222 GLGVEKDKKKAEEYMQKACDFD 243
GLGV +D A+ Y + + D
Sbjct: 641 GLGVNRDFHLAKRYYDQVSEHD 662
Score = 42.7 bits (99), Expect = 0.004
Identities = 36/112 (32%), Positives = 50/112 (44%), Gaps = 12/112 (10%)
Query: 129 TEKGYTNAYINLGIMYMEGRGVPSNYV---KATECFRKAMHKGNVEAYILLGDIYY---- 181
+E YT + I+L Y P N K E F H N A L +Y
Sbjct: 103 SEATYTLSQIHLWSQY----NFPHNMTLAHKYLEKFNDLTHFTNHSAIFDLAVMYATGGC 158
Query: 182 -SGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKA 232
SGNDQ I D KA++YY+ AA + + +A + LA Y G V ++ K+
Sbjct: 159 ASGNDQTVIPQDSAKALLYYQRAAQLGNLKAKQVLAYKYYSGFNVPRNFHKS 210
>ref|NP_472966.1| (NC_000910) predicted membrane associated protein [Plasmodium
falciparum]
pir||B71621 probable membrane associated protein PFB0190c - malaria parasite
(Plasmodium falciparum)
gb|AAC71827.1| (AE001379) predicted membrane associated protein [Plasmodium
falciparum 3D7]
Length = 2295
Score = 46.6 bits (109), Expect = 3e-04
Identities = 29/75 (38%), Positives = 39/75 (51%), Gaps = 2/75 (2%)
Query: 159 ECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAES 218
E F K N A LG+IYY GN+ +GIE D+ KA ++K AAD + + L+
Sbjct: 1080 EYFVKLADNRNSYALAALGEIYYLGNESIGIERDEIKAFEFWKKAADQGDTTS--ALSTG 1137
Query: 219 YQYGLGVEKDKKKAE 233
Y Y +K KK E
Sbjct: 1138 YAYLDEYKKFLKKEE 1152
>ref|NP_075565.1| (NM_023077) hypothetical protein FLJ12439 [Homo sapiens]
dbj|BAB14063.1| (AK022501) unnamed protein product [Homo sapiens]
Length = 231
Score = 46.6 bits (109), Expect = 3e-04
Identities = 51/205 (24%), Positives = 81/205 (38%), Gaps = 48/205 (23%)
Query: 44 KEYERAASFYK-SAIKNGEPLAYVLLGIMYENGRG-VPKDEKKAAEYFQKAVDNDIPRGY 101
K ++ AA K + +N + LG Y G+G + +D K AA F A + +
Sbjct: 49 KNFDEAAKVLKFNCEENQHSDSCYKLGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSI 108
Query: 102 ---NNLGVMYKEGR----GVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNY 154
+N+G++ +G+ G P D KA +Y+ A + GYT++ NL M+++G
Sbjct: 109 AACHNVGLLAHDGQVNEDGQP-DLGKARDYYTRACDGGYTSSCFNLSAMFLQGAP----- 162
Query: 155 VKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEG 214
G D D A Y A D+ A
Sbjct: 163 ---------------------------------GFPKDMDLACKYSMKACDLGHIWACAN 189
Query: 215 LAESYQYGLGVEKDKKKAEEYMQKA 239
+ Y+ G GV+KD+ KAE +A
Sbjct: 190 ASRMYKLGDGVDKDEAKAEVLKNRA 214
>gb|AAG52341.1|AC011663_20 (AC011663) hypothetical protein; 86186-84430 [Arabidopsis thaliana]
gb|AAG52462.1|AC010796_1 (AC010796) hypothetical protein; 68316-70072 [Arabidopsis thaliana]
Length = 364
Score = 46.6 bits (109), Expect = 3e-04
Identities = 41/172 (23%), Positives = 77/172 (43%), Gaps = 22/172 (12%)
Query: 45 EYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRG-YNN 103
E E+A + Y+ A + G+ + LGI Y + P + K+A ++ +++ +N R Y +
Sbjct: 157 EKEKAVNLYRRASELGDAVGQCNLGIAYLQVQ--PSNPKEAMKWLKQSAENGYVRAQYQH 214
Query: 104 LGVMYKE----------GRGVPKDEKKA--VEYFRIATEKGYTNAYINLGIMYMEGRGVP 151
+ + E G V D +++ A E GY A N+ + Y G G+P
Sbjct: 215 VLSSFVETDTAMFGWVIGSFVEADNAMFGHTKWYLKAAEGGYVRAMYNISLCYSVGEGLP 274
Query: 152 SNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMA 203
N A + ++A G+ +A G +S + L K+++Y ++A
Sbjct: 275 QNRKLARKWMKRAADHGHSKAQFEHGLALFSEGEML-------KSVLYLELA 319
>sp|P40608|MOTX_VIBPA Sodium-type polar flagellar protein motX
gb|AAA62189.1| (U09005) MotX [Vibrio parahaemolyticus]
Length = 211
Score = 46.2 bits (108), Expect = 3e-04
Identities = 28/96 (29%), Positives = 42/96 (43%)
Query: 62 PLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKA 121
P L G M G V +D + Y + A +P +G Y G V +D+++A
Sbjct: 72 PAYEFLYGDMLAWGVCVEQDVELGLYYMENAAQQGLPAALEQIGRYYSRGTLVQQDKERA 131
Query: 122 VEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
+ Y R A G NA I+L + + G P +Y A
Sbjct: 132 IPYLREAASMGNLNARIHLAELLLRDYGSPLDYEDA 167
>dbj|BAB63401.1| (AB070443) sodium-type flagellar motor component [Vibrio
alginolyticus]
Length = 211
Score = 45.8 bits (107), Expect = 4e-04
Identities = 28/96 (29%), Positives = 42/96 (43%)
Query: 62 PLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKA 121
P L G M G V +D + Y + A +P +G Y G V +D+++A
Sbjct: 72 PAYEFLYGDMLAWGVCVEQDVELGLYYIENAAHQGLPAALEQIGRYYSRGTLVQQDKERA 131
Query: 122 VEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
+ Y R A G NA I+L + + G P +Y A
Sbjct: 132 IPYLREAASMGNLNARIHLAELLLRDYGSPLDYEDA 167
>gb|AAK01327.1|AF265265_1 (AF265265) unknown [uncultured organism HB1-37]
Length = 168
Score = 45.4 bits (106), Expect = 6e-04
Identities = 29/146 (19%), Positives = 71/146 (47%), Gaps = 7/146 (4%)
Query: 28 EQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAE 87
+ K+ I + AY+ ++ A + + G+ A+++LG +Y+ G+G ++ KA +
Sbjct: 3 KSKQLTIDQASVAYDKGRWKPAFRAFLVLAEQGDETAFLMLGFIYDTGQGARRNLAKALQ 62
Query: 88 YFQKAV---DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMY 144
++ +A +NL + ++ D ++ +++ A + G ++ + + I Y
Sbjct: 63 WYLRAYKVGGTTAALAASNLATICRDN----GDWRQEFQWYVRAAKLGDGDSLVEVEIRY 118
Query: 145 MEGRGVPSNYVKATECFRKAMHKGNV 170
+ G+GV + A + F+ A+ N+
Sbjct: 119 LAGKGVKRSPTMAVKHFKAAVRSKNI 144
>ref|NP_232229.1| (NC_002505) sodium-type flagellar protein MotX [Vibrio cholerae]
pir||E82055 sodium-type flagellar protein MotX VC2601 [imported] - Vibrio
cholerae (group O1 strain N16961)
gb|AAF95742.1| (AE004327) sodium-type flagellar protein MotX [Vibrio cholerae]
Length = 211
Score = 45.4 bits (106), Expect = 6e-04
Identities = 28/91 (30%), Positives = 40/91 (43%)
Query: 67 LLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFR 126
L G M G V +D + Y + A +P LG Y G V +D+++A+ Y R
Sbjct: 77 LYGDMLAWGVCVDQDVELGLYYMENAAHQGLPAALEQLGRYYSRGTLVQQDKERAIPYLR 136
Query: 127 IATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
A G NA I L + + G P +Y A
Sbjct: 137 EAAAMGNLNARIQLAELLLRDYGSPLDYEDA 167
>ref|NP_662672.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM73014.1| (AE012932) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 92
Score = 45.4 bits (106), Expect = 6e-04
Identities = 23/64 (35%), Positives = 37/64 (56%)
Query: 40 AYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR 99
+Y ++ S K A + G+ A +LG+MYE G GV +D++ A E++ KA DN +
Sbjct: 20 SYCQPPSQKEFSELKKAAEQGDAQAQCMLGLMYELGLGVRQDKRTAKEWYGKACDNGNQK 79
Query: 100 GYNN 103
G +N
Sbjct: 80 GCDN 83
Score = 43.1 bits (100), Expect = 0.003
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 190 EPDKDKAIVYYKMAADMSSSRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
+P K K AA+ ++A L Y+ GLGV +DK+ A+E+ KACD K C
Sbjct: 23 QPPSQKEFSELKKAAEQGDAQAQCMLGLMYELGLGVRQDKRTAKEWYGKACDNGNQKGC 81
>gb|AAK20021.1| (AF134839) sodium driven flagellar motor component [Vibrio
fluvialis]
Length = 211
Score = 45.4 bits (106), Expect = 6e-04
Identities = 28/91 (30%), Positives = 40/91 (43%)
Query: 67 LLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFR 126
L G M G V +D + Y + A +P LG Y G V +D+++A+ Y R
Sbjct: 77 LYGDMLAWGVCVNQDVELGLYYMENAAHQGLPEALEQLGRYYSRGTLVQQDKERAIPYLR 136
Query: 127 IATEKGYTNAYINLGIMYMEGRGVPSNYVKA 157
A G NA I L + + G P +Y A
Sbjct: 137 EAAAMGNLNARIQLAELLLRDYGSPLDYEDA 167
>gb|AAL08823.1|AF308666_2 (AF308666) hypothetical polar organelle development protein
[Cowdria ruminantium] [Ehrlichia ruminantium]
Length = 878
Score = 45.4 bits (106), Expect = 6e-04
Identities = 34/142 (23%), Positives = 66/142 (45%), Gaps = 6/142 (4%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYIN 139
++ A E ++A +L +Y +G G+ D +++ + R A ++G N
Sbjct: 712 EDAAAVETLKQAAQTGYTPAQLHLASLYHDGGNGLAVDLEESRVWVRHAADRGDARGMYN 771
Query: 140 LGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVY 199
G+ EG G N +A +++ +G V+ + +Y +G+ +GI PD +A +
Sbjct: 772 YGMYLFEGIGGSQNRAEALVWLKRSAERGLVDGQFNVAKLYETGD--VGITPDLTEAYKW 829
Query: 200 YKMAA---DMSSSRAYEGLAES 218
Y +A+ D+ + A E L S
Sbjct: 830 YLIASRAGDIDAQSAVERLRVS 851
Score = 44.7 bits (104), Expect = 0.001
Identities = 35/162 (21%), Positives = 73/162 (44%), Gaps = 2/162 (1%)
Query: 13 LASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMY 72
+A+L + + A + +Y+ + E A K A + G A + L +Y
Sbjct: 680 IAALAIVPSEPAPEDLARGEVLYQQAMVQLDAEDAAAVETLKQAAQTGYTPAQLHLASLY 739
Query: 73 -ENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEK 131
+ G G+ D +++ + + A D RG N G+ EG G ++ +A+ + + + E+
Sbjct: 740 HDGGNGLAVDLEESRVWVRHAADRGDARGMYNYGMYLFEGIGGSQNRAEALVWLKRSAER 799
Query: 132 GYTNAYINLGIMYMEGR-GVPSNYVKATECFRKAMHKGNVEA 172
G + N+ +Y G G+ + +A + + A G+++A
Sbjct: 800 GLVDGQFNVAKLYETGDVGITPDLTEAYKWYLIASRAGDIDA 841
>gb|AAK18801.1|AF305609_1 (AF305609) LMP1 [Borrelia burgdorferi]
Length = 1173
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/162 (27%), Positives = 72/162 (43%), Gaps = 17/162 (10%)
Query: 29 QKRNYIY-KGEEAYNNKEYERAASFYKSAI-KNGEPL-AYVLLGIMYENGRGVPKDEKKA 85
+K Y+Y K + Y+ A S Y I KN E AY+ L YE ++ +A
Sbjct: 997 EKSEYLYLKASINLKKENYQNAISLYSLVIEKNPENTSAYINLAKAYEKSG----NKSQA 1052
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM 145
+K ++ + NNLG++YK+ K+ +KA+E F A A NL +
Sbjct: 1053 ISTLEKIINKNNKLALNNLGILYKK----EKNYQKAIEIFEKAIINSDIEAKYNLATTLI 1108
Query: 146 EGRGVPSNYVKATECFRK--AMHKGNVEAYILLGDIYYSGND 185
E ++ +A + R+ + N EA LG I Y+ N+
Sbjct: 1109 E----INDNTRAKDLLREYTKLKPNNPEALHALGIIEYNENN 1146
>gb|AAK18803.1|AF305611_1 (AF305611) LMP1 [Borrelia burgdorferi]
Length = 849
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/162 (27%), Positives = 72/162 (43%), Gaps = 17/162 (10%)
Query: 29 QKRNYIY-KGEEAYNNKEYERAASFYKSAI-KNGEPL-AYVLLGIMYENGRGVPKDEKKA 85
+K Y+Y K + Y+ A S Y I KN E AY+ L YE ++ +A
Sbjct: 673 EKSEYLYLKASINLKKENYQNAISLYSLVIEKNPENTSAYINLAKAYEKSG----NKSQA 728
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM 145
+K ++ + NNLG++YK+ K+ +KA+E F A A NL +
Sbjct: 729 ISTLEKIINKNNKLALNNLGILYKK----EKNYQKAIEIFEKAIINSDIEAKYNLATTLI 784
Query: 146 EGRGVPSNYVKATECFRK--AMHKGNVEAYILLGDIYYSGND 185
E ++ +A + R+ + N EA LG I Y+ N+
Sbjct: 785 E----INDNTRAKDLLREYTKLKPNNPEALHALGIIEYNENN 822
>gb|AAK18793.1|AF305601_1 (AF305601) LMP1 [Borrelia burgdorferi]
Length = 957
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/162 (27%), Positives = 72/162 (43%), Gaps = 17/162 (10%)
Query: 29 QKRNYIY-KGEEAYNNKEYERAASFYKSAI-KNGEPL-AYVLLGIMYENGRGVPKDEKKA 85
+K Y+Y K + Y+ A S Y I KN E AY+ L YE ++ +A
Sbjct: 781 EKSEYLYLKASINLKKENYQNAISLYSLVIEKNPENTSAYINLAKAYEKSG----NKSQA 836
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM 145
+K ++ + NNLG++YK+ K+ +KA+E F A A NL +
Sbjct: 837 ISTLEKIINKNNKLALNNLGILYKK----EKNYQKAIEIFEKAIINSDIEAKYNLATTLI 892
Query: 146 EGRGVPSNYVKATECFRK--AMHKGNVEAYILLGDIYYSGND 185
E ++ +A + R+ + N EA LG I Y+ N+
Sbjct: 893 E----INDNTRAKDLLREYTKLKPNNPEALHALGIIEYNENN 930
>gb|AAK18791.1|AF305599_1 (AF305599) LMP1 [Borrelia burgdorferi]
Length = 849
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/162 (27%), Positives = 72/162 (43%), Gaps = 17/162 (10%)
Query: 29 QKRNYIY-KGEEAYNNKEYERAASFYKSAI-KNGEPL-AYVLLGIMYENGRGVPKDEKKA 85
+K Y+Y K + Y+ A S Y I KN E AY+ L YE ++ +A
Sbjct: 673 EKSEYLYLKASINLKKENYQNAISLYSLVIEKNPENTSAYINLAKAYEKSG----NKSQA 728
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM 145
+K ++ + NNLG++YK+ K+ +KA+E F A A NL +
Sbjct: 729 ISTLEKIINKNNKLALNNLGILYKK----EKNYQKAIEIFEKAIINSDIEAKYNLATTLI 784
Query: 146 EGRGVPSNYVKATECFRK--AMHKGNVEAYILLGDIYYSGND 185
E ++ +A + R+ + N EA LG I Y+ N+
Sbjct: 785 E----INDNTRAKDLLREYTKLKPNNPEALHALGIIEYNENN 822
>gb|AAK18800.1|AF305608_1 (AF305608) LMP1 [Borrelia burgdorferi]
Length = 1065
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/162 (27%), Positives = 72/162 (43%), Gaps = 17/162 (10%)
Query: 29 QKRNYIY-KGEEAYNNKEYERAASFYKSAI-KNGEPL-AYVLLGIMYENGRGVPKDEKKA 85
+K Y+Y K + Y+ A S Y I KN E AY+ L YE ++ +A
Sbjct: 889 EKSEYLYLKASINLKKENYQNAISLYSLVIEKNPENTSAYINLAKAYEKSG----NKSQA 944
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM 145
+K ++ + NNLG++YK+ K+ +KA+E F A A NL +
Sbjct: 945 ISTLEKIINKNNKLALNNLGILYKK----EKNYQKAIEIFEKAIINSDIEAKYNLATTLI 1000
Query: 146 EGRGVPSNYVKATECFRK--AMHKGNVEAYILLGDIYYSGND 185
E ++ +A + R+ + N EA LG I Y+ N+
Sbjct: 1001 E----INDNTRAKDLLREYTKLKPNNPEALHALGIIEYNENN 1038
>gb|AAK18797.1|AF305605_1 (AF305605) LMP1 [Borrelia burgdorferi]
Length = 1065
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/162 (27%), Positives = 72/162 (43%), Gaps = 17/162 (10%)
Query: 29 QKRNYIY-KGEEAYNNKEYERAASFYKSAI-KNGEPL-AYVLLGIMYENGRGVPKDEKKA 85
+K Y+Y K + Y+ A S Y I KN E AY+ L YE ++ +A
Sbjct: 889 EKSEYLYLKASINLKKENYQNAISLYSLVIEKNPENTSAYINLAKAYEKSG----NKSQA 944
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM 145
+K ++ + NNLG++YK+ K+ +KA+E F A A NL +
Sbjct: 945 ISTLEKIINKNNKLALNNLGILYKK----EKNYQKAIEIFEKAIINSDIEAKYNLATTLI 1000
Query: 146 EGRGVPSNYVKATECFRK--AMHKGNVEAYILLGDIYYSGND 185
E ++ +A + R+ + N EA LG I Y+ N+
Sbjct: 1001 E----INDNTRAKDLLREYTKLKPNNPEALHALGIIEYNENN 1038
>gb|AAK18799.1|AF305607_1 (AF305607) LMP1 [Borrelia burgdorferi]
Length = 1065
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/162 (27%), Positives = 72/162 (43%), Gaps = 17/162 (10%)
Query: 29 QKRNYIY-KGEEAYNNKEYERAASFYKSAI-KNGEPL-AYVLLGIMYENGRGVPKDEKKA 85
+K Y+Y K + Y+ A S Y I KN E AY+ L YE ++ +A
Sbjct: 889 EKSEYLYLKASINLKKENYQNAISLYSLVIEKNPENTSAYINLAKAYEKSG----NKSQA 944
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM 145
+K ++ + NNLG++YK+ K+ +KA+E F A A NL +
Sbjct: 945 ISTLEKIINKNNKLALNNLGILYKK----EKNYQKAIEIFEKAIINSDIEAKYNLATTLI 1000
Query: 146 EGRGVPSNYVKATECFRK--AMHKGNVEAYILLGDIYYSGND 185
E ++ +A + R+ + N EA LG I Y+ N+
Sbjct: 1001 E----INDNTRAKDLLREYTKLKPNNPEALHALGIIEYNENN 1038
>ref|NP_212344.1| (NC_001318) surface-located membrane protein 1 (lmp1) [Borrelia
burgdorferi]
pir||B70126 surface-located membrane protein 1 (lmp1) homolog - Lyme disease
spirochete
gb|AAC66595.1| (AE001131) surface-located membrane protein 1 (lmp1) [Borrelia
burgdorferi]
gb|AAK18792.1|AF305600_1 (AF305600) LMP1 [Borrelia burgdorferi]
gb|AAK18794.1|AF305602_1 (AF305602) LMP1 [Borrelia burgdorferi]
gb|AAK18796.1|AF305604_1 (AF305604) LMP1 [Borrelia burgdorferi]
gb|AAK18798.1|AF305606_1 (AF305606) LMP1 [Borrelia burgdorferi]
Length = 1119
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/162 (27%), Positives = 72/162 (43%), Gaps = 17/162 (10%)
Query: 29 QKRNYIY-KGEEAYNNKEYERAASFYKSAI-KNGEPL-AYVLLGIMYENGRGVPKDEKKA 85
+K Y+Y K + Y+ A S Y I KN E AY+ L YE ++ +A
Sbjct: 943 EKSEYLYLKASINLKKENYQNAISLYSLVIEKNPENTSAYINLAKAYEKSG----NKSQA 998
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM 145
+K ++ + NNLG++YK+ K+ +KA+E F A A NL +
Sbjct: 999 ISTLEKIINKNNKLALNNLGILYKK----EKNYQKAIEIFEKAIINSDIEAKYNLATTLI 1054
Query: 146 EGRGVPSNYVKATECFRK--AMHKGNVEAYILLGDIYYSGND 185
E ++ +A + R+ + N EA LG I Y+ N+
Sbjct: 1055 E----INDNTRAKDLLREYTKLKPNNPEALHALGIIEYNENN 1092
>ref|NP_290711.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_313087.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
ref|NP_418502.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P32713|YJCO_ECOLI Hypothetical protein yjcO precursor
pir||E65216 hypothetical 25.1 kD protein in gltp-fdhf intergenic region -
Escherichia coli (strain K-12)
gb|AAC43172.1| (U00006) No definition line found [Escherichia coli]
gb|AAD13461.1| (AE000481) orf, hypothetical protein [Escherichia coli K12]
gb|AAG59276.1|AE005641_1 (AE005641) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB38483.1| (AP002568) hypothetical protein [Escherichia coli O157:H7]
Length = 229
Score = 44.7 bits (104), Expect = 0.001
Identities = 52/211 (24%), Positives = 87/211 (40%), Gaps = 16/211 (7%)
Query: 47 ERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
E + + K+A Y L + +G D KA + QKA D+ L
Sbjct: 21 EPGSQYLKAAEAGDRRAQYFLADSWFSSG-----DLSKAEYWAQKAADSGDADACALLAQ 75
Query: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAM- 165
+ K V D +A A + G + L + + + +Y KA A
Sbjct: 76 I-KITNPVSLDYPQAKVLAEKAAQAGSKEGEVTLAHILVNTQAGKPDYPKAISLLENASE 134
Query: 166 ---HKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSS---SRAYEGLAESY 219
+ V+A +LLG IY +G +GI+ D DKA Y+K ++ +S S + G+
Sbjct: 135 DLENDSAVDAQMLLGLIYANG---VGIKADDDKATWYFKRSSAISRTGYSEYWAGMMFLN 191
Query: 220 QYGLGVEKDKKKAEEYMQKACDFDIDKNCKK 250
+EK+K+KA ++ +C D C++
Sbjct: 192 GEEGFIEKNKQKALHWLNLSCMEGFDTGCEE 222
>gb|AAM63376.1| (AY086172) unknown [Arabidopsis thaliana]
Length = 288
Score = 44.3 bits (103), Expect = 0.001
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 80 KDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN 139
+ +++A Y + AVD P LG++Y G V +D A+ F A+EKG+ A I
Sbjct: 145 QSDQQAFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIA 204
Query: 140 LGIMYMEGRGVPSNYVK 156
G + + G VP + K
Sbjct: 205 YGSLLLRGVQVPESLTK 221
>ref|NP_565600.1| (NM_128115) expressed protein [Arabidopsis thaliana]
gb|AAD31360.1| (AC006053) expressed protein [Arabidopsis thaliana]
gb|AAM15230.1| (AC006300) expressed protein [Arabidopsis thaliana]
Length = 288
Score = 44.3 bits (103), Expect = 0.001
Identities = 25/77 (32%), Positives = 39/77 (50%)
Query: 80 KDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYIN 139
+ +++A Y + AVD P LG++Y G V +D A+ F A+EKG+ A I
Sbjct: 145 QSDQQAFHYIENAVDQLHPGALYLLGIVYLTGDCVKQDVDSAIWCFHRASEKGHAGAAIA 204
Query: 140 LGIMYMEGRGVPSNYVK 156
G + + G VP + K
Sbjct: 205 YGSLLLRGVQVPESLTK 221
>ref|NP_214303.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
pir||E70463 conserved hypothetical protein aq_1896 - Aquifex aeolicus
gb|AAC07708.1| (AE000762) hypothetical protein [Aquifex aeolicus]
Length = 342
Score = 43.9 bits (102), Expect = 0.002
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 10/144 (6%)
Query: 80 KDEKKAAEYFQKAV--DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFR--IATEKGYTN 135
++ +A F KA+ + D PR +N LG+ Y E K+ KKA E F+ ++ Y+
Sbjct: 39 RNYSEAIANFHKALRANPDEPRIWNALGLAYMEA----KEYKKAEESFKKALSINPNYSE 94
Query: 136 AYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDK 195
A NLGI+Y + E ++ EA+ L +Y + D +K
Sbjct: 95 ARKNLGILYYKLGRYEEALKYLQEAANDEYYEKKHEAFYYLAKVYEAKQDLKNYVRYLEK 154
Query: 196 AIVYYK--MAADMSSSRAYEGLAE 217
A+ Y + A + ++AYE L +
Sbjct: 155 AVAYNPNFVQAQLELAQAYENLGK 178
>ref|NP_011022.1| (NC_001137) sporulation-specific homolog of csd4; Shc1p
[Saccharomyces cerevisiae]
sp|P39000|YES6_YEAST HYPOTHETICAL 56.6 KD PROTEIN IN RAD51-UBP9 INTERGENIC REGION
pir||S50599 SHC1 protein - yeast (Saccharomyces cerevisiae)
gb|AAB64651.1| (U18839) Yer096wp [Saccharomyces cerevisiae]
Length = 512
Score = 43.5 bits (101), Expect = 0.002
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 8/170 (4%)
Query: 60 GEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEK 119
G P A LLG Y +G ++A F A + Y+ G GV ++
Sbjct: 316 GYPDAQYLLGDAYSSGVFGKIKNRRAFLLFSAAAKRMHIESVYRTAICYECGLGVTRNAP 375
Query: 120 KAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATECFRKAMHKGNVEAYILLG- 177
KAV + A K + A LG+ G G+P + + + +R ++ + + G
Sbjct: 376 KAVNFLTFAATKNHPAAMYKLGVYSYHGLMGLPDDILTKMDGYRWLRRATSMASSFVCGA 435
Query: 178 -----DIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG 222
+IY +G L I D D A+ Y+ AA + + + L ++ + G
Sbjct: 436 PFELANIYMTGYKDL-IISDPDYAMALYEKAAALGHTESARILEDARRSG 484
>ref|NP_458583.1| (NC_003198) putative exported protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD09269.1| (AL627282) putative exported protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 229
Score = 43.5 bits (101), Expect = 0.002
Identities = 49/180 (27%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
D KA + QKA DN L + K V D A + A G I L
Sbjct: 50 DLNKAEYWAQKAADNGDADACALLAQI-KITNPVSLDYPDAKKLAEKAANAGSKAGEITL 108
Query: 141 GIMYMEGRGVPSNYVKATECFRKAM----HKGNVEAYILLGDIYYSGNDQLGIEPDKDKA 196
+ + + +Y KA +KA + V+A +LLG IY +G +GI D +KA
Sbjct: 109 ARILVNTQAGRPDYPKAISLLQKASEDLDNDSAVDAQMLLGLIYANG---VGIAADDEKA 165
Query: 197 IVYYKMAADMSS---SRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNCKKKNT 253
Y+K ++ +S S + G+ +EK+K+KA ++ +C D C++ T
Sbjct: 166 AWYFKRSSAISRTGYSEYWAGMMFLNGEPGFIEKNKQKALHWLNLSCLEGFDTGCEEFET 225
Score = 42.0 bits (97), Expect = 0.006
Identities = 30/98 (30%), Positives = 58/98 (58%), Gaps = 11/98 (11%)
Query: 45 EYERAASFYKSA---IKNGEPL-AYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR- 99
+Y +A S + A + N + A +LLG++Y NG G+ D++KAA YF+++ + I R
Sbjct: 121 DYPKAISLLQKASEDLDNDSAVDAQMLLGLIYANGVGIAADDEKAAWYFKRS--SAISRT 178
Query: 100 GYNN--LGVMYKEGRG--VPKDEKKAVEYFRIATEKGY 133
GY+ G+M+ G + K+++KA+ + ++ +G+
Sbjct: 179 GYSEYWAGMMFLNGEPGFIEKNKQKALHWLNLSCLEGF 216
>gb|AAK18795.1|AF305603_1 (AF305603) LMP1 [Borrelia burgdorferi]
Length = 1011
Score = 43.5 bits (101), Expect = 0.002
Identities = 45/162 (27%), Positives = 71/162 (43%), Gaps = 17/162 (10%)
Query: 29 QKRNYIY-KGEEAYNNKEYERAASFYKSAI-KNGEPL-AYVLLGIMYENGRGVPKDEKKA 85
+K Y+Y K Y+ A S Y I KN E AY+ L YE ++ +A
Sbjct: 835 EKSEYLYLKASINLKKGNYQNAISLYSLVIEKNPENTSAYINLAKAYEKSG----NKSQA 890
Query: 86 AEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYM 145
+K ++ + NNLG++YK+ K+ +KA+E F A A NL +
Sbjct: 891 ISTLEKIINKNNKLALNNLGILYKK----EKNYQKAIEIFEKAIINSDIEAKYNLATTLI 946
Query: 146 EGRGVPSNYVKATECFRK--AMHKGNVEAYILLGDIYYSGND 185
E ++ +A + R+ + N EA LG I Y+ N+
Sbjct: 947 E----INDNTRAKDLLREYTKLKPNNPEALHALGIIEYNENN 984
>ref|NP_010078.1| (NC_001136) Hypothetical ORF; Ydl203cp [Saccharomyces cerevisiae]
pir||S67762 hypothetical protein YDL203c - yeast (Saccharomyces cerevisiae)
emb|CAA98781.1| (Z74251) ORF YDL203c [Saccharomyces cerevisiae]
emb|CAA67465.1| (X99000) ORF D1066 [Saccharomyces cerevisiae]
Length = 623
Score = 43.1 bits (100), Expect = 0.003
Identities = 52/194 (26%), Positives = 86/194 (43%), Gaps = 23/194 (11%)
Query: 68 LGIMYENGRGVPK-DEKKAAEYFQKAVDN-DIPRGYNNLGVMYKEG------------RG 113
LG+ + G + K D A ++F KA D P+ LG +Y+ G
Sbjct: 414 LGMSHLYGLNMQKTDVLLAIKWFDKAAQKGDSPQTLYELGKIYEFSVLPPEIQNLLFANG 473
Query: 114 VPKDEKKAVEYFR-IATEKGYTNAYINLGIMYMEGR-GVPSNYVKATECFRKA---MHKG 168
+ KD + A++Y++ A + Y A LG Y G G+P K+ + KA KG
Sbjct: 474 IRKDSQLAIKYYQQCAKDFEYPLAQWKLGNCYEFGDLGLPVVAKKSIYWYSKAAAAQPKG 533
Query: 169 NVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSS---SRAYEGLAESYQYGLGV 225
N A + L Y +G + ++P+ +A + ++ S +R L Y+ G+G
Sbjct: 534 NPMAMLSLSGWYLTGAPNI-LKPNNKEAFNWALKSSKCSDGKLARTEFALGFYYEKGVGC 592
Query: 226 EKDKKKAEEYMQKA 239
E D A++Y Q+A
Sbjct: 593 EVDLDLAKQYYQRA 606
Score = 43.1 bits (100), Expect = 0.003
Identities = 58/209 (27%), Positives = 91/209 (42%), Gaps = 31/209 (14%)
Query: 62 PLAYVLLGIMYENGRGVP--------KDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRG 113
P A L+G +Y + +P K+++KA EY+ KA + GV ++ RG
Sbjct: 318 PPAMYLMGTLYSHQPYLPIKNKNIVIKNDEKALEYYCKAAKLNNSDACYRAGVCFEYQRG 377
Query: 114 V------PKDE---KKAVEYFRIATEKGYTNAYI-NLGIMYMEGRGV-PSNYVKATECFR 162
P E KKA +Y++ E +A + LG+ ++ G + ++ + A + F
Sbjct: 378 TSSLDPSPTKEQCIKKAFQYYQHGAEVCSNSACMYKLGMSHLYGLNMQKTDVLLAIKWFD 437
Query: 163 KAMHKG-NVEAYILLGDIYYSG------NDQL---GIEPDKDKAIVYYKMAA-DMSSSRA 211
KA KG + + LG IY + L GI D AI YY+ A D A
Sbjct: 438 KAAQKGDSPQTLYELGKIYEFSVLPPEIQNLLFANGIRKDSQLAIKYYQQCAKDFEYPLA 497
Query: 212 YEGLAESYQYG-LGVEKDKKKAEEYMQKA 239
L Y++G LG+ KK+ + KA
Sbjct: 498 QWKLGNCYEFGDLGLPVVAKKSIYWYSKA 526
>ref|NP_463149.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL23108.1| (AE008901) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 229
Score = 42.0 bits (97), Expect = 0.006
Identities = 30/98 (30%), Positives = 58/98 (58%), Gaps = 11/98 (11%)
Query: 45 EYERAASFYKSA---IKNGEPL-AYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPR- 99
+Y +A S + A + N + A +LLG++Y NG G+ D++KAA YF+++ + I R
Sbjct: 121 DYPKAISLLQKASEDLDNDSAVDAQMLLGLIYANGVGIAADDEKAAWYFKRS--SAISRT 178
Query: 100 GYNN--LGVMYKEGRG--VPKDEKKAVEYFRIATEKGY 133
GY+ G+M+ G + K+++KA+ + ++ +G+
Sbjct: 179 GYSEYWAGMMFLNGEPGFIEKNKQKALHWLNLSCLEGF 216
Score = 41.6 bits (96), Expect = 0.008
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 11/180 (6%)
Query: 81 DEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINL 140
D KA + QKA D+ L + K V D A + A G I L
Sbjct: 50 DLNKAEYWAQKAADSGDADACALLAQI-KITNPVSLDYPDAKKLAEKAANAGSKAGEITL 108
Query: 141 GIMYMEGRGVPSNYVKATECFRKAM----HKGNVEAYILLGDIYYSGNDQLGIEPDKDKA 196
+ + + +Y KA +KA + V+A +LLG IY +G +GI D +KA
Sbjct: 109 ARILVNTQAGRPDYPKAISLLQKASEDLDNDSAVDAQMLLGLIYANG---VGIAADDEKA 165
Query: 197 IVYYKMAADMSS---SRAYEGLAESYQYGLGVEKDKKKAEEYMQKACDFDIDKNCKKKNT 253
Y+K ++ +S S + G+ +EK+K+KA ++ +C D C++ T
Sbjct: 166 AWYFKRSSAISRTGYSEYWAGMMFLNGEPGFIEKNKQKALHWLNLSCLEGFDTGCEEFET 225
>ref|XP_131544.1| (XM_131544) RIKEN cDNA 2010305A19 [Mus musculus]
gb|AAH12391.1|AAH12391 (BC012391) Similar to hypothetical protein FLJ12439 [Mus musculus]
Length = 231
Score = 42.0 bits (97), Expect = 0.006
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 74 NGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGR-GVPKDEKKAVEYFRIATEKG 132
N G P D KA +Y+ +A D NL M+ +G G PKD A +Y A + G
Sbjct: 124 NEDGQP-DLGKARDYYSRACDGGYAASCFNLSAMFLQGAPGFPKDMGLACKYSMKACDLG 182
Query: 133 YTNAYINLGIMYMEGRGVPSNYVKATECFRKA--MHK 167
+ A N MY G GV + KA +A +HK
Sbjct: 183 HVWACANASRMYKLGDGVDKDEAKAEVLKNRARQLHK 219
>ref|NP_522192.1| (NC_003296) PROBABLE LIPOPROTEIN [Ralstonia solanacearum]
emb|CAD17782.1| (AL646079) PROBABLE LIPOPROTEIN [Ralstonia solanacearum]
Length = 436
Score = 42.0 bits (97), Expect = 0.006
Identities = 47/197 (23%), Positives = 82/197 (40%), Gaps = 14/197 (7%)
Query: 24 AEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYV-LLGIMYENGRGVPKDE 82
A+ L Q Y+ K E K + A +Y+ A G A L G++ + P
Sbjct: 56 ADQLFQYGRYLQKKE---GPKNFNEVARYYRIAAAYGHYKANSNLQGLVSQGIADSPDAP 112
Query: 83 KKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGI 142
K+ + + V+ IP GY ++G + G G+ +D + A+ Y R A + G +A +
Sbjct: 113 KETIDLAAQLVNQGIPGGYYDIGHYLELGYGLKQDPEMALRYIRKAADLGNPDAQFYVAE 172
Query: 143 MYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKM 202
P+ + +C A +G+ A + LG + + PD KA ++
Sbjct: 173 KLAPIDNAPAIARQMWQC---ATDQGHGRAALTLGVDLKTDK----LYPDAAKA---FQQ 222
Query: 203 AADMSSSRAYEGLAESY 219
A SS A L +++
Sbjct: 223 GAKSGSSTAALSLRDAF 239
>dbj|BAB25716.1| (AK008518) data source:SPTR, source key:Q9H9Z9,
evidence:ISS~homolog to CDNA FLJ12439 FIS, CLONE
NT2RM1000127~putative [Mus musculus]
Length = 204
Score = 42.0 bits (97), Expect = 0.006
Identities = 33/97 (34%), Positives = 44/97 (45%), Gaps = 4/97 (4%)
Query: 74 NGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGR-GVPKDEKKAVEYFRIATEKG 132
N G P D KA +Y+ +A D NL M+ +G G PKD A +Y A + G
Sbjct: 97 NEDGQP-DLGKARDYYSRACDGGYAASCFNLSAMFLQGAPGFPKDMGLACKYSMKACDLG 155
Query: 133 YTNAYINLGIMYMEGRGVPSNYVKATECFRKA--MHK 167
+ A N MY G GV + KA +A +HK
Sbjct: 156 HVWACANASRMYKLGDGVDKDEAKAEVLKNRARQLHK 192
>ref|NP_349017.1| (NC_003030) TPR repeats containing protein [Clostridium
acetobutylicum]
gb|AAK80357.1|AE007740_4 (AE007740) TPR repeats containing protein [Clostridium
acetobutylicum]
Length = 119
Score = 41.6 bits (96), Expect = 0.008
Identities = 32/107 (29%), Positives = 51/107 (46%), Gaps = 11/107 (10%)
Query: 33 YIYKGEEAYNNKEYERAASFYKSA--IKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQ 90
Y K + YN K+Y+RA S YK A +K E + + K+ +KA + +
Sbjct: 3 YFNKATDYYNKKDYKRALSMYKKALELKENESASLYNSAVCLIK----LKEYEKAIPFIK 58
Query: 91 KAVDNDI-PRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNA 136
A++ I R + NLG Y + +D+KKA+ YF A Y ++
Sbjct: 59 SAINKKIDSRYFFNLGYCY----AMIRDKKKALMYFNRAWALNYEDS 101
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.314 0.134 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 167,699,413
Number of Sequences: 1026957
Number of extensions: 7489534
Number of successful extensions: 14257
Number of sequences better than 1.0e-02: 173
Number of HSP's better than 0.0 without gapping: 114
Number of HSP's successfully gapped in prelim test: 64
Number of HSP's that attempted gapping in prelim test: 12857
Number of HSP's gapped (non-prelim): 726
length of query: 256
length of database: 324,149,939
effective HSP length: 118
effective length of query: 138
effective length of database: 202,969,013
effective search space: 28009723794
effective search space used: 28009723794
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 96 (41.6 bits)