BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645774|ref|NP_207951.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(140 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207951.1| (NC_000915) conserved hypothetical protein... 275 6e-74
ref|NP_223804.1| (NC_000921) putative [Helicobacter pylori ... 256 4e-68
ref|NP_281332.1| (NC_002163) hypothetical protein Cj0121 [C... 134 2e-31
ref|NP_213931.1| (NC_000918) hypothetical protein [Aquifex ... 86 5e-17
ref|NP_242229.1| (NC_002570) BH1363~unknown conserved prote... 86 5e-17
ref|NP_622623.1| (NC_003869) predicted metal-dependent hydr... 82 1e-15
ref|NP_658334.1| (NC_003995) UPF0054, Uncharacterized prote... 80 3e-15
gb|AAM20655.1| (AY099804) unknown protein [Arabidopsis thal... 80 5e-15
ref|NP_562934.1| (NC_003366) conserved hypothetical protein... 77 4e-14
ref|NP_390410.1| (NC_000964) similar to hypothetical protei... 76 7e-14
ref|NP_418874.1| (NC_002696) conserved hypothetical protein... 75 1e-13
ref|NP_531064.1| (NC_003304) conserved hypothetical protein... 73 6e-13
ref|NP_353390.1| (NC_003062) AGR_C_626p [Agrobacterium tume... 73 6e-13
ref|NP_646339.1| (NC_003923) conserved hypothetical protein... 72 8e-13
ref|NP_372094.1| (NC_002758) conserved hypothetical protein... 72 8e-13
ref|NP_347924.1| (NC_003030) Uncharacterized conserved pred... 72 8e-13
ref|NP_464990.1| (NC_003210) similar to unknown proteins [L... 72 1e-12
ref|NP_326209.1| (NC_002771) conserved hypothetical protein... 72 1e-12
ref|NP_229309.1| (NC_000853) conserved hypothetical protein... 71 2e-12
ref|NP_180157.1| (NM_128146) hypothetical protein [Arabidop... 71 2e-12
ref|NP_384513.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 70 3e-12
ref|NP_540891.1| (NC_003317) DIACYGLYCEROL KINASE [Brucella... 70 4e-12
ref|NP_078327.1| (NC_002162) conserved hypothetical [Ureapl... 69 7e-12
ref|NP_470838.1| (NC_003212) similar to unknown proteins [L... 69 7e-12
ref|NP_603643.1| (NC_003454) Hypothetical Metal-Binding Pro... 69 1e-11
ref|NP_283516.1| (NC_003116) hypothetical protein NMA0717 [... 68 2e-11
ref|NP_642779.1| (NC_003919) conserved hypothetical protein... 68 2e-11
ref|NP_295815.1| (NC_001263) conserved hypothetical protein... 68 2e-11
ref|NP_637685.1| (NC_003902) conserved hypothetical protein... 67 3e-11
ref|NP_273583.1| (NC_003112) conserved hypothetical protein... 67 3e-11
ref|NP_406144.1| (NC_003143) conserved hypothetical protein... 66 6e-11
ref|NP_252671.1| (NC_002516) conserved hypothetical protein... 65 1e-10
ref|NP_442208.1| (NC_000911) hypothetical protein [Synechoc... 62 1e-09
ref|NP_216883.1| (NC_000962) hypothetical protein Rv2367c [... 62 1e-09
ref|NP_336916.1| (NC_002755) conserved hypothetical protein... 62 1e-09
ref|NP_298193.1| (NC_002488) conserved hypothetical protein... 61 2e-09
ref|NP_601487.1| (NC_003450) COG0319:Predicted metal-depend... 61 2e-09
ref|NP_484315.1| (NC_003272) hypothetical protein [Nostoc s... 60 3e-09
ref|NP_230607.1| (NC_002505) conserved hypothetical protein... 60 5e-09
ref|NP_106185.1| (NC_002678) hypothetical protein [Mesorhiz... 59 7e-09
ref|NP_662270.1| (NC_002932) conserved hypothetical protein... 59 7e-09
sp|P57517|Y442_BUCAI Hypothetical protein BU442 59 7e-09
ref|NP_301521.1| (NC_002677) conserved hypothetical protein... 59 7e-09
ref|NP_455237.1| (NC_003198) conserved hypothetical protein... 59 1e-08
ref|NP_518650.1| (NC_003295) HYPOTHETICAL PROTEIN [Ralstoni... 58 2e-08
ref|NP_286384.1| (NC_002655) orf, hypothetical protein [Esc... 58 2e-08
ref|NP_626772.1| (NC_003888) conserved hypothetical protein... 58 2e-08
ref|NP_415192.1| (NC_000913) orf, hypothetical protein [Esc... 57 3e-08
ref|NP_459660.1| (NC_003197) putative metal-dependent hydro... 57 3e-08
ref|NP_240254.1| (NC_002528) hypothetical protein [Buchnera... 57 4e-08
pir||S72588 hypothetical protein B1937_F1_21 - Mycobacteriu... 57 4e-08
gb|AAC36473.1| (AF085347) hypothetical protein [Salmonella ... 55 1e-07
ref|NP_660759.1| (NC_004061) hypothetical 17.5 kD protein i... 54 2e-07
ref|NP_245982.1| (NC_002663) unknown [Pasteurella multocida... 54 3e-07
ref|NP_268764.1| (NC_002737) conserved hypothetical protein... 54 3e-07
ref|NP_358463.1| (NC_003098) Conserved hypothetical protein... 52 1e-06
ref|NP_438177.1| (NC_000907) conserved hypothetical protein... 52 1e-06
dbj|BAA96100.1| (AB005741) OrfX [Actinobacillus actinomycet... 51 2e-06
emb|CAB62265.1| (AJ249116) YbeY protein [Salmonella typhimu... 51 2e-06
gb|AAC38046.1| (AF000954) No definition line found [Strepto... 50 3e-06
ref|NP_219087.1| (NC_000919) conserved hypothetical protein... 50 4e-06
ref|NP_345448.1| (NC_003028) conserved hypothetical protein... 50 5e-06
ref|NP_212194.1| (NC_001318) conserved hypothetical protein... 49 1e-05
pir||T46748 hypothetical protein [imported] - Treponema hyo... 48 2e-05
pir||C36933 orf 5' of diacylglycerol kinase homolog - Strep... 47 4e-05
ref|NP_221093.1| (NC_000963) unknown [Rickettsia prowazekii... 47 4e-05
ref|NP_267242.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococ... 47 5e-05
ref|NP_360779.1| (NC_003103) unknown [Rickettsia conorii] >... 46 6e-05
ref|NP_224705.1| (NC_000922) predicted Metalloenzyme [Chlam... 42 9e-04
ref|NP_297079.1| (NC_002620) conserved hypothetical protein... 41 0.003
ref|NP_219934.1| (NC_000117) possible metalloenzyme [Chlamy... 40 0.006
>ref|NP_207951.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|O25775|YB60_HELPY Hypothetical protein HP1160
pir||H64664 conserved hypothetical protein HP1160 - Helicobacter pylori
(strain 26695)
gb|AAD08206.1| (AE000622) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 140
Score = 275 bits (703), Expect = 6e-74
Identities = 140/140 (100%), Positives = 140/140 (100%)
Query: 1 MLEIDNQTPLESDFLLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFP 60
MLEIDNQTPLESDFLLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFP
Sbjct: 1 MLEIDNQTPLESDFLLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFP 60
Query: 61 LEAIPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQK 120
LEAIPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQK
Sbjct: 61 LEAIPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQK 120
Query: 121 ESELIKAFNLPLSLIERTQD 140
ESELIKAFNLPLSLIERTQD
Sbjct: 121 ESELIKAFNLPLSLIERTQD 140
>ref|NP_223804.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZK54|YB60_HELPJ Hypothetical protein JHP1087
pir||G71850 hypothetical protein jhp1087 - Helicobacter pylori (strain J99)
gb|AAD06669.1| (AE001536) putative [Helicobacter pylori J99]
Length = 141
Score = 256 bits (653), Expect = 4e-68
Identities = 130/140 (92%), Positives = 136/140 (96%)
Query: 1 MLEIDNQTPLESDFLLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFP 60
MLEIDNQTPLESDFLLLEKIA+VLA TQIIELVLVSDET+REIN+DLR CDYATDVLSFP
Sbjct: 1 MLEIDNQTPLESDFLLLEKIADVLASTQIIELVLVSDETMREINRDLRDCDYATDVLSFP 60
Query: 61 LEAIPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQK 120
LEAIPHTPLGSVVINAPLAQ NALKLGHSLE+EIALLFIHGVLHLLGYDHEKDKGEQRQK
Sbjct: 61 LEAIPHTPLGSVVINAPLAQENALKLGHSLEDEIALLFIHGVLHLLGYDHEKDKGEQRQK 120
Query: 121 ESELIKAFNLPLSLIERTQD 140
E ELIKAF+LPLSLIERTQ+
Sbjct: 121 EGELIKAFDLPLSLIERTQE 140
>ref|NP_281332.1| (NC_002163) hypothetical protein Cj0121 [Campylobacter jejuni]
pir||A81429 hypothetical protein Cj0121 [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB72605.1| (AL139074) hypothetical protein Cj0121 [Campylobacter jejuni]
Length = 135
Score = 134 bits (337), Expect = 2e-31
Identities = 74/123 (60%), Positives = 89/123 (72%), Gaps = 2/123 (1%)
Query: 17 LEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHT-PLGSVVIN 75
LE IA+ L+P + ELV V + ++EIN + R D TDVLSFPLE I + PLGSVVIN
Sbjct: 11 LESIASFLSPKDV-ELVFVDSKEMQEINLEQRKQDKTTDVLSFPLENIDESLPLGSVVIN 69
Query: 76 APLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQKESELIKAFNLPLSLI 135
LA+ A +LGHS E EI+LLFIH +LHLLG+DHE D GE R+KE ELI+ FNLP SLI
Sbjct: 70 VDLAKEKAKELGHSYEEEISLLFIHAMLHLLGFDHENDNGEMREKEKELIEHFNLPKSLI 129
Query: 136 ERT 138
RT
Sbjct: 130 VRT 132
>ref|NP_213931.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O67367|YD54_AQUAE Hypothetical protein AQ_1354
pir||D70417 conserved hypothetical protein aq_1354 - Aquifex aeolicus
gb|AAC07338.1| (AE000736) hypothetical protein [Aquifex aeolicus]
Length = 150
Score = 86.3 bits (212), Expect = 5e-17
Identities = 47/97 (48%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPL--EAIPHTPLGSVVINAPLAQTNALKLG 87
+ + + D+ IRE+NK R D TDVLSFP+ E + LG VVI+ A+ A +LG
Sbjct: 43 LSVYITDDQEIRELNKTYRKKDKPTDVLSFPMGEEFGGYKILGDVVISQDTAERQARELG 102
Query: 88 HSLENEIALLFIHGVLHLLGYDHEKDKGEQRQKESEL 124
HSLE E+ L +HG++HLLGYDHEK GE+ +K EL
Sbjct: 103 HSLEEEVKRLIVHGIVHLLGYDHEKG-GEEEKKFREL 138
>ref|NP_242229.1| (NC_002570) BH1363~unknown conserved protein [Bacillus halodurans]
sp|Q9KD56|YD63_BACHD Hypothetical protein BH1363
dbj|BAB05082.1| (AP001511) BH1363~unknown conserved protein [Bacillus halodurans]
Length = 159
Score = 86.3 bits (212), Expect = 5e-17
Identities = 48/121 (39%), Positives = 69/121 (56%), Gaps = 14/121 (11%)
Query: 27 TQIIELVLVSDETIREINKDLRGCDYATDVLSF----------PLEAIPHTP--LGSVVI 74
T + L VSDE I+E+N+D RG D TDV+SF P+E TP LG +++
Sbjct: 39 TYELSLSFVSDEEIQELNRDYRGKDQPTDVISFALNEVGEGEQPVEPEAGTPNLLGDIIV 98
Query: 75 NAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQR--QKESELIKAFNLPL 132
+ P Q A GHS E E+A L +HG LHLLGYDH + E++ ++ +++ A+ L
Sbjct: 99 SIPRCQEQAEAYGHSFERELAFLIVHGFLHLLGYDHMSEDEEKKMFMRQEDILTAYGLTR 158
Query: 133 S 133
S
Sbjct: 159 S 159
>ref|NP_622623.1| (NC_003869) predicted metal-dependent hydrolase [Thermoanaerobacter
tengcongensis]
gb|AAM24227.1| (AE013062) predicted metal-dependent hydrolase [Thermoanaerobacter
tengcongensis]
Length = 158
Score = 82.0 bits (201), Expect = 1e-15
Identities = 55/152 (36%), Positives = 86/152 (56%), Gaps = 25/152 (16%)
Query: 4 IDN-QTPLES---DFLLLEKIANVLAPTQIIELVLVS-----DETIREINKDLRGCDYAT 54
IDN QT +++ + L++ I L ++++ V VS +E IR++NK RG D +T
Sbjct: 5 IDNRQTKVDASGLEALVVRAIKATLEEEEVVDEVEVSVSFVDNEEIRKLNKYYRGIDSST 64
Query: 55 DVLSFPL--------------EAIPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIH 100
DVLSFPL +A P+G +VI+ A+ A + GHS E E+A L +H
Sbjct: 65 DVLSFPLMEFEEIEEGEEDEKDAEEIYPIGDIVISLEKAKEQAEEYGHSFEREVAYLTVH 124
Query: 101 GVLHLLGYDHEKDKGEQ--RQKESELIKAFNL 130
+LHLLGYDHE ++ + R+KE ++++ L
Sbjct: 125 SMLHLLGYDHETEEERKLMREKEEKVMERLGL 156
>ref|NP_658334.1| (NC_003995) UPF0054, Uncharacterized protein family UPF0054
[Bacillus anthracis A2012] [Bacillus anthracis str.
A2012]
Length = 156
Score = 80.5 bits (197), Expect = 3e-15
Identities = 51/147 (34%), Positives = 79/147 (53%), Gaps = 20/147 (13%)
Query: 4 IDNQTPLESDFL-LLEKIANVLAPTQIIE------LVLVSDETIREINKDLRGCDYATDV 56
ID ++ +++ L+ +I A + IE + V +E IREIN+D R D TDV
Sbjct: 8 IDETEEVKEEYVNLIREILGKAAQMEKIEDGAELSVTFVDNERIREINRDYRDKDQPTDV 67
Query: 57 LSFPLEAIPHTP-----------LGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHL 105
+SF +E + LG ++I+ P A+ A + GHS + E+ L +HG LHL
Sbjct: 68 ISFAMEEMGEGEMEIVGVEMPRMLGDLIISIPRAKEQAEEYGHSFDRELGFLALHGFLHL 127
Query: 106 LGYDH--EKDKGEQRQKESELIKAFNL 130
LGYDH E+D+ E ++ E ++AF L
Sbjct: 128 LGYDHMTEEDEKEMFGRQKEXLEAFGL 154
>gb|AAM20655.1| (AY099804) unknown protein [Arabidopsis thaliana]
Length = 584
Score = 79.7 bits (195), Expect = 5e-15
Identities = 45/106 (42%), Positives = 67/106 (62%), Gaps = 5/106 (4%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSF----PLEAIPHTPLGSVVINAPLAQTNALK 85
+ ++L +D+ I ++NK+ RG D+ATDVLS P +P +G +VI+ A A +
Sbjct: 166 LSVMLCNDDFICKLNKEWRGEDHATDVLSMSQHVPELKLPVLMMGDLVISVETAARQAAE 225
Query: 86 LGHSLENEIALLFIHGVLHLLGYDHE-KDKGEQRQKESELIKAFNL 130
GH+L +EI +L IHG+LHLLG+DHE D+ EQ +E E + NL
Sbjct: 226 RGHTLLDEIRILVIHGLLHLLGFDHEISDEAEQEMEEEEELLLKNL 271
>ref|NP_562934.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB81724.1| (AP003192) conserved hypothetical protein [Clostridium perfringens]
Length = 168
Score = 76.6 bits (187), Expect = 4e-14
Identities = 45/125 (36%), Positives = 61/125 (48%), Gaps = 24/125 (19%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTP--------------------- 68
+ LV V +E IR IN + RG D ATDVLSFP+ P
Sbjct: 40 VSLVFVDNEEIRGINNETRGIDKATDVLSFPMIDYPEDKVYKDVYLEHEFDKCYFDGDEL 99
Query: 69 -LGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELI 125
LG +V++ + +++ HS E E L H VLHLLGYDH E++K R +E EL+
Sbjct: 100 ILGDIVLSLERTKEQSIEFNHSFEREACYLVTHSVLHLLGYDHMEEEEKARMRGREEELL 159
Query: 126 KAFNL 130
N+
Sbjct: 160 GKLNI 164
>ref|NP_390410.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|P46347|YQFG_BACSU Hypothetical protein yqfG
pir||F69953 conserved hypothetical protein yqfG - Bacillus subtilis
dbj|BAA12479.1| (D84432) YqfG [Bacillus subtilis]
emb|CAB14461.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis]
emb|CAB14474.1| (Z99117) similar to hypothetical proteins [Bacillus subtilis]
Length = 157
Score = 75.9 bits (185), Expect = 7e-14
Identities = 43/117 (36%), Positives = 67/117 (56%), Gaps = 13/117 (11%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLE-----------AIPHTPLGSVVINAPL 78
+ + +VS++ I +INK+ RG D TDV+SF LE A LG+++I+A
Sbjct: 41 VSVTIVSNDDIHQINKEYRGKDAPTDVISFALEEEGEGEIEIVGAEMPPVLGNIIISADR 100
Query: 79 AQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAFNLPLS 133
+ A + HS + E+ L +HG LHLLGYDH ++++ E K+ EL+ A+ L S
Sbjct: 101 TREQAEEYNHSFKRELGFLAVHGFLHLLGYDHMTKEEEEEMFTKQKELLDAYGLKRS 157
>ref|NP_418874.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK22042.1| (AE005679) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 157
Score = 75.1 bits (183), Expect = 1e-13
Identities = 38/106 (35%), Positives = 61/106 (56%), Gaps = 2/106 (1%)
Query: 28 QIIELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTPLGSVVINAPLAQTNALKLG 87
Q I ++L D++++ +N+D R DYAT+VLSFP P +G + + + A + G
Sbjct: 42 QGIVILLTDDDSVQALNRDFRKKDYATNVLSFPSPPNPEGQIGDIALAYGVCAREAAEQG 101
Query: 88 HSLENEIALLFIHGVLHLLGYDHEKDKGEQRQK--ESELIKAFNLP 131
L + + L HGVLHLLGYDHE+D + + E E++ ++P
Sbjct: 102 KPLAHHLQHLVAHGVLHLLGYDHERDDEAEAMEALEREILAGLDVP 147
>ref|NP_531064.1| (NC_003304) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL41380.1| (AE009007) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 168
Score = 72.8 bits (177), Expect = 6e-13
Identities = 44/108 (40%), Positives = 59/108 (53%), Gaps = 7/108 (6%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFP---LE--AIPHTPLGSVVINAPLAQTNAL 84
+ LV DE IREIN + R D AT+VLSFP LE +P LG +VI + AL
Sbjct: 51 LSLVFTDDENIREINAEWRDKDKATNVLSFPAFPLEPGGMPGPMLGDIVIARETVEREAL 110
Query: 85 KLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAFNL 130
+L S E+ + L +HG LHL GYDH E++ E E+ ++ L
Sbjct: 111 ELDKSFEDHLTHLLVHGFLHLFGYDHMDEEEAEEMESLETRILAVLGL 158
>ref|NP_353390.1| (NC_003062) AGR_C_626p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK86175.1| (AE007973) AGR_C_626p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 180
Score = 72.8 bits (177), Expect = 6e-13
Identities = 44/108 (40%), Positives = 59/108 (53%), Gaps = 7/108 (6%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFP---LE--AIPHTPLGSVVINAPLAQTNAL 84
+ LV DE IREIN + R D AT+VLSFP LE +P LG +VI + AL
Sbjct: 63 LSLVFTDDENIREINAEWRDKDKATNVLSFPAFPLEPGGMPGPMLGDIVIARETVEREAL 122
Query: 85 KLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAFNL 130
+L S E+ + L +HG LHL GYDH E++ E E+ ++ L
Sbjct: 123 ELDKSFEDHLTHLLVHGFLHLFGYDHMDEEEAEEMESLETRILAVLGL 170
>ref|NP_646339.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB95387.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 155
Score = 72.4 bits (176), Expect = 8e-13
Identities = 43/114 (37%), Positives = 60/114 (51%), Gaps = 14/114 (12%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEA-----------IPHTPLGSVVINAPL 78
+ + V + I+EIN+ R D TDV+SF LE IP LG ++I +
Sbjct: 40 LSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLDIPRV-LGDIIICTDV 98
Query: 79 AQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAFNL 130
AQ A GHS E E+ L +HG LHLLGYDH E D+ E ++ ++ A+ L
Sbjct: 99 AQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGL 152
>ref|NP_372094.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_374683.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB42662.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB57732.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 155
Score = 72.4 bits (176), Expect = 8e-13
Identities = 43/114 (37%), Positives = 60/114 (51%), Gaps = 14/114 (12%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEA-----------IPHTPLGSVVINAPL 78
+ + V + I+EIN+ R D TDV+SF LE IP LG ++I +
Sbjct: 40 LSVTFVDKQEIQEINRTYRDKDKVTDVISFALEEDEPEIDFSGLDIPRV-LGDIIICTDV 98
Query: 79 AQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAFNL 130
AQ A GHS E E+ L +HG LHLLGYDH E D+ E ++ ++ A+ L
Sbjct: 99 AQEQANNYGHSFERELGFLALHGFLHLLGYDHMTEADEKEMFGRQDTILNAYGL 152
>ref|NP_347924.1| (NC_003030) Uncharacterized conserved predicted metal-binding
protein, YQFG ortholog [Clostridium acetobutylicum]
gb|AAK79264.1|AE007641_10 (AE007641) Uncharacterized conserved predicted metal-binding
protein, YQFG ortholog [Clostridium acetobutylicum]
Length = 166
Score = 72.4 bits (176), Expect = 8e-13
Identities = 41/125 (32%), Positives = 66/125 (52%), Gaps = 24/125 (19%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAIP----------------------HT 67
+ ++ V +ETIREIN++ R D TDVLSFP+ +
Sbjct: 40 VSVIFVDNETIREINRENREVDKVTDVLSFPMLEYGEGKVFKDIYEECDFEDEYFDEGNL 99
Query: 68 PLGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELI 125
LG + ++ A+ + + GHS E A L +H VLHL+GYDH ++DK + R++E E++
Sbjct: 100 VLGDIALSLERAEEQSKEYGHSFLREAAYLTVHSVLHLMGYDHMVDEDKIKMRKREEEIL 159
Query: 126 KAFNL 130
F++
Sbjct: 160 SHFDI 164
>ref|NP_464990.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes
EGD-e]
emb|CAC99543.1| (AL591979) similar to unknown proteins [Listeria monocytogenes]
Length = 161
Score = 72.0 bits (175), Expect = 1e-12
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 27/157 (17%)
Query: 1 MLEID----NQTPLESDFLLLEKIANVLAPTQIIE------LVLVSDETIREINKDLRGC 50
+LEID + L+ D L+E I A IE L ++E IREIN++ R
Sbjct: 3 VLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQGTELSLTFTTNEGIREINREYRDK 62
Query: 51 DYATDVLSFPLEAIP-------------HTP--LGSVVINAPLAQTNALKLGHSLENEIA 95
D ATDV+SF LE + TP LG ++I+ A+ A GH+ E+
Sbjct: 63 DQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELG 122
Query: 96 LLFIHGVLHLLGYDHEKDKGEQRQ--KESELIKAFNL 130
L +HG+LHLLGYDH + E+ + E++ A+ L
Sbjct: 123 FLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGL 159
>ref|NP_326209.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis]
emb|CAC13551.1| (AL445564) conserved hypothetical protein [Mycoplasma pulmonis]
Length = 149
Score = 71.6 bits (174), Expect = 1e-12
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPL------EAIPHTPLGSVVINAPLAQTNA 83
++L++ ++ +RE N R D TDVLSFP + + PLGS++I+ A
Sbjct: 39 VDLLITDNKEVRENNLLYRNVDKETDVLSFPFGDPDFFDHLDFIPLGSIIISHEKIVAQA 98
Query: 84 LKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQ--RQKESELIKAFNL 130
L+ HS + E LF H +LHLLGYDH+++ E+ Q E+++ N+
Sbjct: 99 LEFNHSKKREFCYLFTHSLLHLLGYDHKEEDEEKIMNQYTKEIVEKLNI 147
>ref|NP_229309.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
sp|Q9X1J7|YF09_THEMA Hypothetical protein TM1509
pir||F72244 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD36576.1|AE001799_8 (AE001799) conserved hypothetical protein [Thermotoga maritima]
Length = 150
Score = 70.9 bits (172), Expect = 2e-12
Identities = 35/95 (36%), Positives = 58/95 (60%), Gaps = 3/95 (3%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTPLGSVVINAPLAQTNALKLGHS 89
+ ++LVS++ I+E+N+ RG D TDVL+FPL + G + + + + NA + ++
Sbjct: 34 VNVILVSEDEIKELNQQFRGQDRPTDVLTFPL--MEEDVYGEIYVCPLIVEENAREFNNT 91
Query: 90 LENEIALLFIHGVLHLLGYDHE-KDKGEQRQKESE 123
E E+ + IHG+LHL GYDHE +DK + E +
Sbjct: 92 FEKELLEVVIHGILHLAGYDHEFEDKNSKEMFEKQ 126
>ref|NP_180157.1| (NM_128146) hypothetical protein [Arabidopsis thaliana]
gb|AAC42244.1| (AC005395) hypothetical protein [Arabidopsis thaliana]
Length = 343
Score = 70.9 bits (172), Expect = 2e-12
Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 17/118 (14%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSF----PLEAIPHTPLGSVVINAPLAQTNALK 85
+ ++L +D+ I ++NK+ RG D+ATDVLS P +P +G +VI+ A A +
Sbjct: 145 LSVMLCNDDFICKLNKEWRGEDHATDVLSMSQHVPELKLPVLMMGDLVISVETAARQAAE 204
Query: 86 LGHSLENEIALLF------------IHGVLHLLGYDHE-KDKGEQRQKESELIKAFNL 130
GH+L +EI +L IHG+LHLLG+DHE D+ EQ +E E + NL
Sbjct: 205 RGHTLLDEIRILVSLFADTLNVFSKIHGLLHLLGFDHEISDEAEQEMEEEEELLLKNL 262
>ref|NP_384513.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC41844.1| (AL591783) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 168
Score = 70.5 bits (171), Expect = 3e-12
Identities = 44/119 (36%), Positives = 62/119 (51%), Gaps = 9/119 (7%)
Query: 12 SDFLLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTP--- 68
+DFL E+ + A + LV D++IR IN + RG D AT+VLSFP A P TP
Sbjct: 33 ADFLAREENQPLPAQAAELSLVFTDDQSIRAINAEWRGQDKATNVLSFP--AFPVTPGRM 90
Query: 69 ----LGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQKESE 123
LG +V+ + A +L + + L +HG LHL GYDH +D +R + E
Sbjct: 91 PGPMLGDIVVAHETLRREAAELEKPFDAHLTHLLVHGFLHLFGYDHIEDDEAERMEGLE 149
>ref|NP_540891.1| (NC_003317) DIACYGLYCEROL KINASE [Brucella melitensis]
gb|AAL53155.1| (AE009630) DIACYGLYCEROL KINASE [Brucella melitensis]
Length = 168
Score = 70.1 bits (170), Expect = 4e-12
Identities = 40/112 (35%), Positives = 61/112 (53%), Gaps = 7/112 (6%)
Query: 27 TQIIELVLVSDETIREINKDLRGCDYATDVLSFPLEAI-----PHTPLGSVVINAPLAQT 81
T + +V D +I+ +N + RG D T+VLSFP + P LG +VI +
Sbjct: 44 TSELSVVFTDDASIQLLNGEWRGKDKPTNVLSFPAFPVKAGSQPGPMLGDIVIARETVER 103
Query: 82 NALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQ--RQKESELIKAFNLP 131
A + G +EN ++ L +HG LHLLGYDHE D+ + +E E++ A +P
Sbjct: 104 EAKEEGKPIENHLSHLVVHGFLHLLGYDHETDEEAEVMEAREREILHALAIP 155
>ref|NP_078327.1| (NC_002162) conserved hypothetical [Ureaplasma urealyticum]
pir||A82884 conserved hypothetical UU490 [imported] - Ureaplasma urealyticum
gb|AAF30902.1|AE002147_3 (AE002147) conserved hypothetical [Ureaplasma urealyticum]
Length = 155
Score = 69.3 bits (168), Expect = 7e-12
Identities = 39/92 (42%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 28 QIIELVLVSDETIREINKDLRGCDYATDVLSFPLE--AIPHTPLGSVVINAPLAQTNALK 85
+ E V ++TI+EINK+ R DY TDV+SF + I LG + I A +
Sbjct: 39 RFFECHFVDEKTIQEINKNYRNKDYITDVISFAFDDGEIITPLLGEMYICYQKVVDQASQ 98
Query: 86 LGHSLENEIALLFIHGVLHLLGYDHEKDKGEQ 117
HS E E+ LF HG+LHLLGYDH K + E+
Sbjct: 99 FAHSFERELCFLFTHGLLHLLGYDHIKIEDEK 130
>ref|NP_470838.1| (NC_003212) similar to unknown proteins [Listeria innocua]
emb|CAC96733.1| (AL596168) similar to unknown proteins [Listeria innocua]
Length = 161
Score = 69.3 bits (168), Expect = 7e-12
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 24/153 (15%)
Query: 1 MLEIDNQTPLESDFLLLEKIANVLAPTQIIE------LVLVSDETIREINKDLRGCDYAT 54
+L+ N P + D L+E I A IE L ++E I+EIN++ R D AT
Sbjct: 8 LLDETNNLP-DEDKQLVENILQFAAGYLKIEEGTELSLTFTTNEGIQEINREYRNKDQAT 66
Query: 55 DVLSFPLEAIP-------------HTP--LGSVVINAPLAQTNALKLGHSLENEIALLFI 99
DV+SF LE + TP LG ++I+ A+ A GH+ E+ L +
Sbjct: 67 DVISFALEEMGDGETEIDWGDFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAV 126
Query: 100 HGVLHLLGYDHEKDKGEQRQ--KESELIKAFNL 130
HG+LHLLGYDH + E+ + E++ A+ L
Sbjct: 127 HGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGL 159
>ref|NP_603643.1| (NC_003454) Hypothetical Metal-Binding Protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gb|AAL94942.1| (AE010584) Hypothetical Metal-Binding Protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 162
Score = 68.6 bits (166), Expect = 1e-11
Identities = 36/107 (33%), Positives = 58/107 (53%), Gaps = 8/107 (7%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAIP------HTPLGSVVINAPLAQTNA 83
+ L+L +E I+ IN++ R D TDV+SF + LG ++I+ + A
Sbjct: 50 LSLLLTDNENIQVINREYRDKDAPTDVISFAYHETEDFNIGSYDTLGDIIISLERVEEQA 109
Query: 84 LKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAF 128
+ HS E E + HG+LH+LGYDH E+DK R++E ++ +F
Sbjct: 110 SEYNHSFEREFYYVLTHGILHILGYDHIEEEDKKLMREREEAILSSF 156
>ref|NP_283516.1| (NC_003116) hypothetical protein NMA0717 [Neisseria meningitidis
Z2491]
pir||H81914 hypothetical protein NMA0717 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84002.1| (AL162754) hypothetical protein NMA0717 [Neisseria meningitidis
Z2491]
Length = 171
Score = 67.8 bits (164), Expect = 2e-11
Identities = 44/112 (39%), Positives = 62/112 (55%), Gaps = 13/112 (11%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPL---EAIP----HTPLGSVVINAPLAQTN 82
I L+L+ +E R N+D RG DYAT+VLSF L E +P G ++I +
Sbjct: 53 ISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVLKE 112
Query: 83 ALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQKESELIKAFNLPLSL 134
A + G + E A L IHGVLHL+GYDH +D E+E+++A + L L
Sbjct: 113 AAEQGKTPERHFAHLTIHGVLHLMGYDHIED------DEAEIMEAEEIRLML 158
>ref|NP_642779.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37315.1| (AE011883) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 161
Score = 67.8 bits (164), Expect = 2e-11
Identities = 39/88 (44%), Positives = 49/88 (55%), Gaps = 7/88 (7%)
Query: 43 INKDLRGCDYATDVLSFPLEAIPHTP-------LGSVVINAPLAQTNALKLGHSLENEIA 95
+N RG DYAT+VLSFP E P LG +VI AP+ A + G SL A
Sbjct: 57 LNHHYRGKDYATNVLSFPAELPEGLPKGIKMPLLGDLVICAPVVAREAAEQGKSLAAHYA 116
Query: 96 LLFIHGVLHLLGYDHEKDKGEQRQKESE 123
L +HG LHLLG+DHE DK + ++ E
Sbjct: 117 HLTVHGTLHLLGWDHEDDKEAEAMEQLE 144
>ref|NP_295815.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||B75315 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF11642.1|AE002045_2 (AE002045) conserved hypothetical protein [Deinococcus radiodurans]
Length = 175
Score = 67.8 bits (164), Expect = 2e-11
Identities = 40/90 (44%), Positives = 52/90 (57%), Gaps = 4/90 (4%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPL--EAIPHTP--LGSVVINAPLAQTNALK 85
+ +VLV D IR + + G D ATDVLSFP P P LG ++I+ AQ A
Sbjct: 56 VTVVLVGDPEIRALKLEHWGEDAATDVLSFPTWEPGDPFMPPHLGDIIISLDTAQRQAES 115
Query: 86 LGHSLENEIALLFIHGVLHLLGYDHEKDKG 115
GHSL E+ALL HG+ HL+G+DH +G
Sbjct: 116 RGHSLTREVALLASHGLTHLVGHDHPHAEG 145
>ref|NP_637685.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM41609.1| (AE012341) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 161
Score = 67.4 bits (163), Expect = 3e-11
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 7/88 (7%)
Query: 43 INKDLRGCDYATDVLSFPLEAIPHTP-------LGSVVINAPLAQTNALKLGHSLENEIA 95
+N RG DYAT+VLSFP E P LG +VI AP+ A + G SL A
Sbjct: 57 LNHHYRGKDYATNVLSFPAEMPQGLPKGVKMPLLGDLVICAPVVAREAAEQGKSLSAHYA 116
Query: 96 LLFIHGVLHLLGYDHEKDKGEQRQKESE 123
L +HG LHLLG+DHE DK ++ E
Sbjct: 117 HLTVHGTLHLLGWDHEDDKEADAMEQLE 144
>ref|NP_273583.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||A81188 conserved hypothetical protein NMB0538 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF40967.1| (AE002409) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 169
Score = 67.0 bits (162), Expect = 3e-11
Identities = 44/111 (39%), Positives = 60/111 (53%), Gaps = 9/111 (8%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPL---EAIP----HTPLGSVVINAPLAQTN 82
I L+L+ +E R N+D RG DYAT+VLSF L E +P G ++I +
Sbjct: 53 ISLILLDEEEARAYNRDYRGKDYATNVLSFALNEGEILPCQVSEKLYGDLIICPQVVLKE 112
Query: 83 ALKLGHSLENEIALLFIHGVLHLLGYDH-EKDKGE-QRQKESELIKAFNLP 131
A + G + E A L IHG LHL+GYDH E D+ E +E L++A P
Sbjct: 113 AAEQGKTPEQHFAHLTIHGTLHLMGYDHIEDDEAEIMEAEEIRLMRAAGFP 163
>ref|NP_406144.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]
emb|CAC92861.1| (AJ414153) conserved hypothetical protein [Yersinia pestis]
Length = 157
Score = 66.2 bits (160), Expect = 6e-11
Identities = 42/129 (32%), Positives = 66/129 (50%), Gaps = 6/129 (4%)
Query: 9 PLESDFLL-LEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHT 67
P E DF LE + + P + + LV + ++N RG D +T+VLSFP EA P
Sbjct: 19 PTEGDFQRWLEAVLPLFQPVSEVTIRLVDEAESHDLNLTYRGKDKSTNVLSFPFEAPPEI 78
Query: 68 P---LGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQK--ES 122
LG ++I + + A++ +L A + +HG LHLLGYDH D+ + + E+
Sbjct: 79 ELPLLGDLIICRQVVEKEAIEQEKALLAHWAHMVVHGSLHLLGYDHIDDEEAEEMELIET 138
Query: 123 ELIKAFNLP 131
E++ P
Sbjct: 139 EIMHGLGYP 147
>ref|NP_252671.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||H83147 conserved hypothetical protein PA3982 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG07369.1|AE004816_5 (AE004816) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 160
Score = 65.1 bits (157), Expect = 1e-10
Identities = 51/143 (35%), Positives = 68/143 (46%), Gaps = 13/143 (9%)
Query: 2 LEIDNQT-------PLESDFLLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYAT 54
LE+D Q P E+ F ++A P + + LV + E+N R DYAT
Sbjct: 3 LELDLQVASAAPDLPSEAQFRAWCELALRQRPESELTIRLVDEAEGLELNSTYRHKDYAT 62
Query: 55 DVLSFPL----EAIPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH 110
+VLSFP E + LG +VI AP+ AL+ L+ A L IHG LHLLGYDH
Sbjct: 63 NVLSFPADVPDELLDIPLLGDLVICAPVVAREALEQRKPLQAHWAHLVIHGCLHLLGYDH 122
Query: 111 --EKDKGEQRQKESELIKAFNLP 131
+ + E E EL+ P
Sbjct: 123 IDDAEAEEMETLERELLAELGHP 145
>ref|NP_442208.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|Q55142|Y053_SYNY3 Hypothetical protein slr0053
pir||S74360 hypothetical protein slr0053 - Synechocystis sp. (strain PCC 6803)
dbj|BAA10278.1| (D64001) ORF_ID:slr0053~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 179
Score = 62.0 bits (149), Expect = 1e-09
Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 17 LEKIANVLAPTQIIELVLV--SDETIREINKDLRGCDYATDVLSF-------PLEAIPHT 67
LE +A+ L P EL L+ D I+E+N+ R D TDVL+F PL T
Sbjct: 45 LEYLADCLPPASSYELTLLFTGDRRIQELNRKFRHQDKPTDVLAFAALEGDFPLIESEET 104
Query: 68 P----LGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH 110
LG +VI+ A A + GHS + E+ L HG+LHLLG+DH
Sbjct: 105 EEPLYLGDIVISLERADHQARERGHSAKLEVVWLTAHGLLHLLGWDH 151
>ref|NP_216883.1| (NC_000962) hypothetical protein Rv2367c [Mycobacterium
tuberculosis H37Rv]
pir||F70586 hypothetical protein Rv2367c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB08472.1| (Z95208) hypothetical protein Rv2367c [Mycobacterium tuberculosis
H37Rv]
Length = 182
Score = 61.6 bits (148), Expect = 1e-09
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 2 LEIDNQTPLESDFLLLEKIANVLA------PTQIIELVLVSDETIREINKDLRGCDYATD 55
+E+ N++ ++ L +A + P + ++L+ + +++ TD
Sbjct: 8 IEVANESGIDVSEAELVSVARFVIAKMDVNPCAELSMLLLDTAAMADLHMRWMDLPGPTD 67
Query: 56 VLSFPLEAI-----PHTP------LGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLH 104
V+SFP++ + P P LG +V+ A A GHSL +E+ALL IHGVLH
Sbjct: 68 VMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPEFAAEQAAAAGHSLGHELALLTIHGVLH 127
Query: 105 LLGYDHEKDKGEQ 117
LLGYDH + E+
Sbjct: 128 LLGYDHAEPDEEK 140
>ref|NP_336916.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
sp|O05831|YN67_MYCTU Hypothetical protein Rv2367c
gb|AAK46730.1| (AE007083) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 177
Score = 61.6 bits (148), Expect = 1e-09
Identities = 40/133 (30%), Positives = 66/133 (49%), Gaps = 17/133 (12%)
Query: 2 LEIDNQTPLESDFLLLEKIANVLA------PTQIIELVLVSDETIREINKDLRGCDYATD 55
+E+ N++ ++ L +A + P + ++L+ + +++ TD
Sbjct: 3 IEVANESGIDVSEAELVSVARFVIAKMDVNPCAELSMLLLDTAAMADLHMRWMDLPGPTD 62
Query: 56 VLSFPLEAI-----PHTP------LGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLH 104
V+SFP++ + P P LG +V+ A A GHSL +E+ALL IHGVLH
Sbjct: 63 VMSFPMDELEPGGRPDAPEPGPSMLGDIVLCPEFAAEQAAAAGHSLGHELALLTIHGVLH 122
Query: 105 LLGYDHEKDKGEQ 117
LLGYDH + E+
Sbjct: 123 LLGYDHAEPDEEK 135
>ref|NP_298193.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
pir||C82747 conserved hypothetical protein XF0903 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF83713.1|AE003930_3 (AE003930) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 161
Score = 60.8 bits (146), Expect = 2e-09
Identities = 38/107 (35%), Positives = 55/107 (50%), Gaps = 7/107 (6%)
Query: 34 LVSDETIREINKDLRGCDYATDVLSFPLEAIPHTP-------LGSVVINAPLAQTNALKL 86
+V ++ R +N R DYAT+VLSFP + P LG +V+ AP+ A +
Sbjct: 48 IVDEKEGRALNYHYRNKDYATNVLSFPAQLPEPLPKALKIPLLGDIVMCAPVIAREAAEQ 107
Query: 87 GHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQKESELIKAFNLPLS 133
G SL A L +HG LHLLG++HE + ++ E NL +S
Sbjct: 108 GKSLSAHYAHLTVHGTLHLLGWNHEDHQEADAMEQLEREILANLGIS 154
>ref|NP_601487.1| (NC_003450) COG0319:Predicted metal-dependent hydrolase
[Corynebacterium glutamicum]
dbj|BAB99680.1| (AP005281) Predicted metal-dependent hydrolase [Corynebacterium
glutamicum ATCC 13032]
Length = 196
Score = 60.8 bits (146), Expect = 2e-09
Identities = 37/98 (37%), Positives = 54/98 (54%), Gaps = 13/98 (13%)
Query: 34 LVSDETIREINKDLRGCDYATDVLSFPLEAIPH--------TP----LGSVVINAPLAQT 81
+V +TI +++ + TDV+SFP++ + TP LG +V+ A
Sbjct: 42 IVDVDTIADLHVKWLDLEGPTDVMSFPMDELTPGYSRPDGATPGPAMLGDIVLCPEFAAK 101
Query: 82 NALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQ 119
A K GH L +E+ALL +HG LHLLGYDH D E+R+
Sbjct: 102 QATKAGHDLAHELALLTVHGSLHLLGYDH-VDPAEERE 138
>ref|NP_484315.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB77795.1| (AP003581) ORF_ID:all0271~hypothetical protein [Nostoc sp. PCC
7120]
Length = 184
Score = 60.5 bits (145), Expect = 3e-09
Identities = 43/122 (35%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 25 APTQIIELVLVSDETIREINKDLRGCDYATDVLSFP-LEA-IPHTP--------LGSVVI 74
AP+ I L L D I+ IN R + TDVL+F LE +P P LG +V+
Sbjct: 61 APSYEIGLRLTDDTEIQAINAQYRQQNKPTDVLAFAALEVDLPQNPEMVAEPLYLGDIVV 120
Query: 75 NAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKG--EQRQKESELIKAFNLPL 132
+ AQ A + HSL E+A L HG+LHLLG+DH ++ Q++ L++A + +
Sbjct: 121 SINTAQRQAGQQEHSLSTELAWLTAHGLLHLLGWDHPDEESLIAMLQQQVVLLEAIGINI 180
Query: 133 SL 134
++
Sbjct: 181 NV 182
>ref|NP_230607.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||C82261 conserved hypothetical protein VC0960 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF94122.1| (AE004177) conserved hypothetical protein [Vibrio cholerae]
Length = 154
Score = 59.7 bits (143), Expect = 5e-09
Identities = 42/133 (31%), Positives = 72/133 (53%), Gaps = 10/133 (7%)
Query: 2 LEIDNQTPLESDFLLLEKIANVLAPTQI---IELVLVSDETIREINKDLRGCDYATDVLS 58
+E ++ P E++F L + + P Q + + +V + +N + RG D T+VLS
Sbjct: 11 VENEHGLPSEAEFALW--LTRTITPFQAQAEVTVRIVDEAESHALNLNYRGKDKPTNVLS 68
Query: 59 FPLEA---IPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH-EKDK 114
FP EA + LG +VI + + A++ L+ A + +HG LHLLGYDH E D+
Sbjct: 69 FPFEAPSGMEMDLLGDLVICRQVVEREAIEQNKPLQAHWAHMVVHGSLHLLGYDHIEDDE 128
Query: 115 GEQRQK-ESELIK 126
E+ + E+E+++
Sbjct: 129 AEEMESLETEIMQ 141
>ref|NP_106185.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB51971.1| (AP003006) hypothetical protein [Mesorhizobium loti]
Length = 166
Score = 59.3 bits (142), Expect = 7e-09
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPL----EAIPHTP-LGSVVINAPLAQTNAL 84
+ +V D IR +N + RG D T+VLSFP + P P LG +V+ A A
Sbjct: 54 LSVVFSDDAHIRTLNAEWRGKDKPTNVLSFPAFPFAQGGPLPPMLGDIVLAAETVSREAA 113
Query: 85 KLGHSLENEIALLFIHGVLHLLGYDHEKD 113
++N I L IHG+LHLLG+DHE D
Sbjct: 114 LEDKPVQNHITHLVIHGLLHLLGHDHETD 142
>ref|NP_662270.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM72612.1| (AE012896) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 137
Score = 59.3 bits (142), Expect = 7e-09
Identities = 37/115 (32%), Positives = 58/115 (50%), Gaps = 6/115 (5%)
Query: 2 LEIDNQTPLESDFLLLEKIANVLAPTQ-----IIELVLVSDETIREINKDLRGCDYATDV 56
L+I N T D LL ++ ++ + IE + ++ IR IN+D G DY TD
Sbjct: 3 LQIFNTTKRTIDETLLAEVIRLVIGEEGGAVGSIEAIYCGNKMIRRINRDFLGHDYVTDT 62
Query: 57 LSFPLEAIPHTPLGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHE 111
++F G I+ + ++NA + G S E+E+ + IH LHL+GYD E
Sbjct: 63 ITFGYNEGGEVD-GEFYISLDVIESNARRFGVSFEDELLRVTIHSALHLMGYDDE 116
>sp|P57517|Y442_BUCAI Hypothetical protein BU442
Length = 155
Score = 59.3 bits (142), Expect = 7e-09
Identities = 35/101 (34%), Positives = 57/101 (55%), Gaps = 3/101 (2%)
Query: 17 LEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFPLEA---IPHTPLGSVV 73
++KI II + +V + I+++N + R + T++LSFP I + LG +V
Sbjct: 28 IQKILCKKKNINIITIRIVDEWEIKKLNFNYRKKNKPTNILSFPFNKFIKINYKLLGDLV 87
Query: 74 INAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDK 114
+ + + +LK SLE+ A + IHG LHLLGYDH+ +K
Sbjct: 88 LCKNIIEKESLKYNKSLESHWAHITIHGTLHLLGYDHQNNK 128
>ref|NP_301521.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
sp|Q49752|YN67_MYCLE Hypothetical protein ML0628
emb|CAC30136.1| (AL583919) conserved hypothetical protein [Mycobacterium leprae]
Length = 178
Score = 59.3 bits (142), Expect = 7e-09
Identities = 39/133 (29%), Positives = 64/133 (47%), Gaps = 17/133 (12%)
Query: 2 LEIDNQTPLESDFLLLEKIANVLA------PTQIIELVLVSDETIREINKDLRGCDYATD 55
+E+ N++ + + L +A + P + +VL+ + +++ TD
Sbjct: 3 VEVSNESGFDVSEVELVSVARFVIIKMDVNPAAELSMVLLDTAAMADLHMRWMDLPGPTD 62
Query: 56 VLSFPLEAIPH-----------TPLGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLH 104
V+SFP++ + LG +V+ A A GHSL +E+ALL IHGVLH
Sbjct: 63 VMSFPMDEFEPGGRPDAAEPGPSMLGDIVLCPEFAAQQAAAEGHSLGHELALLTIHGVLH 122
Query: 105 LLGYDHEKDKGEQ 117
LLGYDH + E+
Sbjct: 123 LLGYDHGEPDEEK 135
>ref|NP_455237.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD05139.1| (AL627267) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 157
Score = 58.5 bits (140), Expect = 1e-08
Identities = 37/103 (35%), Positives = 57/103 (54%), Gaps = 5/103 (4%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTP---LGSVVINAPLAQTNALKL 86
+ + LV + ++N RG D T+VLSFP EA P LG ++I + + A +
Sbjct: 41 VTIRLVDEAESHDLNLTYRGKDKPTNVLSFPFEAPPGIEMPLLGDLIICRQVVEQEAQEQ 100
Query: 87 GHSLENEIALLFIHGVLHLLGYDH-EKDKGEQRQK-ESELIKA 127
LE A + +HG LHLLGYDH + D+ E+ + E+E++ A
Sbjct: 101 SKPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLA 143
>ref|NP_518650.1| (NC_003295) HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD14057.1| (AL646059) HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 255
Score = 57.8 bits (138), Expect = 2e-08
Identities = 36/115 (31%), Positives = 54/115 (46%), Gaps = 3/115 (2%)
Query: 20 IANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTPLGS-VVINAPL 78
IA L + + V +E R +N RG DYAT+VL+F P+ + +V+ P+
Sbjct: 135 IAPALFADAQLNVRFVDEEEGRTLNHTYRGKDYATNVLTFSYAETEDDPVAADIVLCCPV 194
Query: 79 AQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQK--ESELIKAFNLP 131
+ A G L A L +HG LH GYDHE + + E+E++ P
Sbjct: 195 VEQEAKDQGKPLRAHYAHLIVHGALHAQGYDHEDPAQAEEMEGIETEVLAGLGFP 249
>ref|NP_286384.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_308724.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG54992.1|AE005245_1 (AE005245) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB34120.1| (AP002552) hypothetical protein [Escherichia coli O157:H7]
Length = 155
Score = 57.8 bits (138), Expect = 2e-08
Identities = 38/103 (36%), Positives = 55/103 (52%), Gaps = 5/103 (4%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTP---LGSVVINAPLAQTNALKL 86
+ + +V +N RG D T+VLSFP E P LG +VI + + A +
Sbjct: 41 VTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQMVEKEAQEQ 100
Query: 87 GHSLENEIALLFIHGVLHLLGYDH-EKDKGEQRQK-ESELIKA 127
G LE A + +HG LHLLGYDH E D+ E+ + E+E++ A
Sbjct: 101 GKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLA 143
>ref|NP_626772.1| (NC_003888) conserved hypothetical protein SCC117.06 [Streptomyces
coelicolor A3(2)]
emb|CAB66427.1| (AL136534) conserved hypothetical protein SCC117.06 [Streptomyces
coelicolor A3(2)]
Length = 165
Score = 57.8 bits (138), Expect = 2e-08
Identities = 36/122 (29%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 3 EIDNQTPLESDFLLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFPLE 62
E+D Q L+ L ++ + P + +++V E + +++ TDV+SFP++
Sbjct: 12 EVDEQAILDIARYALARMR--IHPLSELSVIVVDAEAMEQLHIQWMDLPGPTDVMSFPMD 69
Query: 63 AI----------PHTPLGSVVINAPLAQTNALKLG--HSLENEIALLFIHGVLHLLGYDH 110
+ P LG +V+ +A + HS++ E+ LL +HGVLHLLGYDH
Sbjct: 70 ELRPPSKDEEEAPQGLLGDIVLCPEVAAKQGAEAPTEHSMDEELQLLTVHGVLHLLGYDH 129
Query: 111 EK 112
E+
Sbjct: 130 EE 131
>ref|NP_415192.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P77385|YBEY_ECOLI Hypothetical protein ybeY
pir||A64801 ybeY protein - Escherichia coli
gb|AAB40861.1| (U82598) HI0004 homolog [Escherichia coli]
gb|AAC73760.1| (AE000170) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35314.1| (D90706) Hypothetical protein HI0004 [Escherichia coli]
Length = 155
Score = 57.4 bits (137), Expect = 3e-08
Identities = 38/103 (36%), Positives = 55/103 (52%), Gaps = 5/103 (4%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTP---LGSVVINAPLAQTNALKL 86
+ + +V +N RG D T+VLSFP E P LG +VI + + A +
Sbjct: 41 VTIRVVDTAESHSLNLTYRGKDKPTNVLSFPFEVPPGMEMSLLGDLVICRQVVEKEAQEQ 100
Query: 87 GHSLENEIALLFIHGVLHLLGYDH-EKDKGEQRQK-ESELIKA 127
G LE A + +HG LHLLGYDH E D+ E+ + E+E++ A
Sbjct: 101 GKPLEAHWAHMVVHGSLHLLGYDHIEDDEAEEMEALETEIMLA 143
>ref|NP_459660.1| (NC_003197) putative metal-dependent hydrolase [Salmonella
typhimurium LT2]
sp|O87574|YBEY_SALTY Hypothetical protein ybeY
gb|AAL19619.1| (AE008727) putative metal-dependent hydrolase [Salmonella
typhimurium LT2]
Length = 157
Score = 57.4 bits (137), Expect = 3e-08
Identities = 37/103 (35%), Positives = 57/103 (54%), Gaps = 5/103 (4%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEA---IPHTPLGSVVINAPLAQTNALKL 86
+ + LV + ++N RG D T+VLSFP EA I LG ++I + + A +
Sbjct: 41 VTIRLVDEAESHDLNLTYRGKDKPTNVLSFPFEAPAGIEMPLLGDLIICRQVVEQEAQEQ 100
Query: 87 GHSLENEIALLFIHGVLHLLGYDH-EKDKGEQRQK-ESELIKA 127
LE A + +HG LHLLGYDH + D+ E+ + E+E++ A
Sbjct: 101 SKPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLA 143
>ref|NP_240254.1| (NC_002528) hypothetical protein [Buchnera sp. APS]
dbj|BAB13140.1| (AP001119) hypothetical protein [Buchnera sp. APS]
Length = 111
Score = 56.6 bits (135), Expect = 4e-08
Identities = 31/84 (36%), Positives = 50/84 (58%), Gaps = 3/84 (3%)
Query: 34 LVSDETIREINKDLRGCDYATDVLSFPLEA---IPHTPLGSVVINAPLAQTNALKLGHSL 90
+V + I+++N + R + T++LSFP I + LG +V+ + + +LK SL
Sbjct: 1 MVDEWEIKKLNFNYRKKNKPTNILSFPFNKFIKINYKLLGDLVLCKNIIEKESLKYNKSL 60
Query: 91 ENEIALLFIHGVLHLLGYDHEKDK 114
E+ A + IHG LHLLGYDH+ +K
Sbjct: 61 ESHWAHITIHGTLHLLGYDHQNNK 84
>pir||S72588 hypothetical protein B1937_F1_21 - Mycobacterium leprae
gb|AAA17156.1| (U00016) B1937_F1_21 [Mycobacterium leprae]
Length = 140
Score = 56.6 bits (135), Expect = 4e-08
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 11/97 (11%)
Query: 32 LVLVSDETIREINKDLRGCDYATDVLSFPLEAIPH-----------TPLGSVVINAPLAQ 80
+VL+ + +++ TDV+SFP++ + LG +V+ A
Sbjct: 1 MVLLDTAAMADLHMRWMDLPGPTDVMSFPMDEFEPGGRPDAAEPGPSMLGDIVLCPEFAA 60
Query: 81 TNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQ 117
A GHSL +E+ALL IHGVLHLLGYDH + E+
Sbjct: 61 QQAAAEGHSLGHELALLTIHGVLHLLGYDHGEPDEEK 97
>gb|AAC36473.1| (AF085347) hypothetical protein [Salmonella typhimurium]
Length = 140
Score = 55.1 bits (131), Expect = 1e-07
Identities = 36/103 (34%), Positives = 58/103 (55%), Gaps = 5/103 (4%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEA---IPHTPLGSVVINAPLAQTNALKL 86
+ + LV + ++ RG D T+VLSFP EA I LG ++I+ + + A +
Sbjct: 26 VTIRLVDEAETPDLILTYRGKDKPTNVLSFPFEAPAGIEMPLLGDLIISRQVVEQEAQEQ 85
Query: 87 GHSLENEIALLFIHGVLHLLGYDH-EKDKGEQRQK-ESELIKA 127
+ LE A + +HG LHLLGYDH + D+ E+ + E+E++ A
Sbjct: 86 TNPLEAHWAHMVVHGSLHLLGYDHIDDDEAEEMESLETEIMLA 128
>ref|NP_660759.1| (NC_004061) hypothetical 17.5 kD protein in cutE-asnB [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM67970.1| (AE014118) hypothetical 17.5 kD protein in cutE-asnB [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 105
Score = 54.3 bits (129), Expect = 2e-07
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 40 IREINKDLRGCDYATDVLSFPLEAIPH---TPLGSVVINAPLAQTNALKLGHSLENEIAL 96
++ IN RG + +T++LSF + + T LG +V+ + + +LK +LE+ A
Sbjct: 1 MKNINLKYRGKNKSTNILSFKFDLFINKNQTLLGDLVLCKKIIEKESLKYQKTLESRWAH 60
Query: 97 LFIHGVLHLLGYDHEKDKGEQRQKESE 123
+ IHG LHLLGYDH+ K ++ ++ E
Sbjct: 61 MIIHGTLHLLGYDHKNKKEKKIMEKIE 87
>ref|NP_245982.1| (NC_002663) unknown [Pasteurella multocida]
sp|P57900|YA45_PASMU Hypothetical protein PM1045
gb|AAK03129.1| (AE006145) unknown [Pasteurella multocida]
Length = 158
Score = 53.9 bits (128), Expect = 3e-07
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 5/99 (5%)
Query: 34 LVSDETIREINKDLRGCDYATDVLSFPLEA---IPHTPLGSVVINAPLAQTNALKLGHSL 90
+V + ++N RG D T+VLSFP E + + LG +VI + + A + G L
Sbjct: 45 IVDEAESHDLNLTYRGKDKPTNVLSFPFECPDEVELSLLGDLVICRQVVEKEAEEQGKPL 104
Query: 91 ENEIALLFIHGVLHLLGYDHEKDKGEQRQK--ESELIKA 127
A + +HG LHLLGYDH +D + + E+E++++
Sbjct: 105 MAHWAHMVVHGCLHLLGYDHIEDAEAEEMEGLETEIMQS 143
>ref|NP_268764.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
ref|NP_606733.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
gb|AAK33485.1| (AE006507) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
gb|AAL97232.1| (AE009990) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 165
Score = 53.9 bits (128), Expect = 3e-07
Identities = 36/127 (28%), Positives = 59/127 (46%), Gaps = 28/127 (22%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTPL-------------------- 69
+ + V++E E+N + R D TDV+S LE P TP+
Sbjct: 38 MSVTFVTNERSHELNLEYRDTDRPTDVIS--LEYKPETPILFSQEDLAADPSLAEMMAEF 95
Query: 70 ----GSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHE--KDKGEQRQKESE 123
G + I+ A+ + + GHS E E+ L +HG LH+ GYDH +++ E + E
Sbjct: 96 DAYIGELFISIDKAREQSQEYGHSFEREMGFLAVHGFLHINGYDHYTLEEEKEMFTLQEE 155
Query: 124 LIKAFNL 130
++ A+ L
Sbjct: 156 ILTAYGL 162
>ref|NP_358463.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAK99673.1| (AE008461) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 165
Score = 51.6 bits (122), Expect = 1e-06
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 24/123 (19%)
Query: 32 LVLVSDETIREINKDLRGCDYATDVLS----------FPLEAIPHTP------------L 69
+ V++E E+N + R D TDV+S F E + P +
Sbjct: 40 VTFVTNERSHELNLEYRDTDRPTDVISLEYKPELEIAFDEEDLLENPELAEMMSEFDAYI 99
Query: 70 GSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKA 127
G + I+ A A + GHS E E+ L +HG LH+ GYDH +++ E + E++ A
Sbjct: 100 GELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEILTA 159
Query: 128 FNL 130
+ L
Sbjct: 160 YGL 162
>ref|NP_438177.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P71335|YBEY_HAEIN Hypothetical protein HI0004
pir||A64140 conserved hypothetical protein HI0004 - Haemophilus influenzae
gb|AAC21683.1| (U32686) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 154
Score = 51.6 bits (122), Expect = 1e-06
Identities = 33/90 (36%), Positives = 46/90 (50%), Gaps = 4/90 (4%)
Query: 34 LVSDETIREINKDLRGCDYATDVLSFPLEAIPHTPL---GSVVINAPLAQTNALKLGHSL 90
+V + E+N RG D T+VLSFP E L G +VI + + A + L
Sbjct: 45 IVDEAESHELNLTYRGKDRPTNVLSFPFECPDEVELPLLGDLVICRQVVEREASEQEKPL 104
Query: 91 ENEIALLFIHGVLHLLGYDH-EKDKGEQRQ 119
A + +HG LHLLGYDH E D+ E+ +
Sbjct: 105 MAHWAHMVVHGSLHLLGYDHIEDDEAEEME 134
>dbj|BAA96100.1| (AB005741) OrfX [Actinobacillus actinomycetemcomitans]
Length = 154
Score = 51.2 bits (121), Expect = 2e-06
Identities = 35/92 (38%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 33 VLVSDET-IREINKDLRGCDYATDVLSFPLEAIPHTPL---GSVVINAPLAQTNALKLGH 88
V + DET +N + RG D+ T+VLSFP E L G +VI + + A +
Sbjct: 43 VRIVDETESHALNFNYRGKDHPTNVLSFPFECPDEVELPLLGDLVICRQVVEREAQEQEK 102
Query: 89 SLENEIALLFIHGVLHLLGYDH-EKDKGEQRQ 119
L A + +HG LHLLGYDH E D+ E+ +
Sbjct: 103 PLIAHWAHMVVHGSLHLLGYDHIEDDEAEEME 134
>emb|CAB62265.1| (AJ249116) YbeY protein [Salmonella typhimurium]
Length = 123
Score = 51.2 bits (121), Expect = 2e-06
Identities = 31/83 (37%), Positives = 44/83 (52%), Gaps = 3/83 (3%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEA---IPHTPLGSVVINAPLAQTNALKL 86
+ + LV + ++N RG D T+VLSFP EA I LG ++I + + A +
Sbjct: 41 VTIRLVDEAESHDLNLTYRGKDKPTNVLSFPFEAPAGIEMPLLGDLIICRQVVEQEAQEQ 100
Query: 87 GHSLENEIALLFIHGVLHLLGYD 109
LE A + +HG LHLLGYD
Sbjct: 101 SKPLEAHWAHMVVHGSLHLLGYD 123
>gb|AAC38046.1| (AF000954) No definition line found [Streptococcus mutans]
Length = 164
Score = 50.4 bits (119), Expect = 3e-06
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 24/123 (19%)
Query: 32 LVLVSDETIREINKDLRGCDYATDV----------LSFPLEAIPHTP------------L 69
+ V++E E+N R + TDV LSF E + P +
Sbjct: 40 VTFVTNERSHELNLKYRDTNRPTDVISLEYKPESSLSFDEEDLADDPDLAEVLTEFDAYI 99
Query: 70 GSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKA 127
G + I+ A+ A + GHS E E+ L +HG LH+ GYDH +++ E + E++ A
Sbjct: 100 GELFISVDKAREQAQEYGHSFEREMGFLAVHGFLHINGYDHYTPQEEKEMFSLQEEILDA 159
Query: 128 FNL 130
+ L
Sbjct: 160 YGL 162
>ref|NP_219087.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
sp|O83656|Y650_TREPA Hypothetical protein TP0650
pir||A71300 conserved hypothetical protein TP0650 - syphilis spirochete
gb|AAC65623.1| (AE001239) conserved hypothetical protein [Treponema pallidum]
Length = 160
Score = 50.1 bits (118), Expect = 4e-06
Identities = 32/106 (30%), Positives = 51/106 (47%), Gaps = 8/106 (7%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEA-------IPHTPLGSVVINAPLAQTN 82
+ +V +D IR +N D RG D TDVLSF + G ++I+ + N
Sbjct: 41 LSIVCCTDAFIRRLNYDYRGIDSPTDVLSFENDGEYCDDAGTRFFLAGDIIISLESVREN 100
Query: 83 ALKLGHSLENEIALLFIHGVLHLLGYDHEKDK-GEQRQKESELIKA 127
+ + + E + IHG+LHL G DH+ + G++ + E I A
Sbjct: 101 SERFHVAAHEEFKRVLIHGILHLSGMDHQDNSPGQEMLRLQERILA 146
>ref|NP_345448.1| (NC_003028) conserved hypothetical protein TIGR00043 [Streptococcus
pneumoniae TIGR4]
gb|AAK75088.1| (AE007401) conserved hypothetical protein TIGR00043 [Streptococcus
pneumoniae TIGR4]
Length = 165
Score = 49.7 bits (117), Expect = 5e-06
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 28/125 (22%)
Query: 32 LVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTPL---------------------- 69
+ V++E E+N + R D TDV+S LE P +
Sbjct: 40 VTFVTNERSHELNLEYRNTDRPTDVIS--LEYKPELEIAFDEEDLLENSELAEMMSEFDA 97
Query: 70 --GSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELI 125
G + I+ A A + GHS E E+ L +HG LH+ GYDH +++ E + E++
Sbjct: 98 YIGELFISIDKAHEQAEEYGHSFEREMGFLAVHGFLHINGYDHYTPEEEAEMFGLQEEIL 157
Query: 126 KAFNL 130
A+ L
Sbjct: 158 TAYGL 162
>ref|NP_212194.1| (NC_001318) conserved hypothetical protein [Borrelia burgdorferi]
sp|O51087|Y060_BORBU Hypothetical protein BB0060
pir||D70107 conserved hypothetical protein BB0060 - Lyme disease spirochete
gb|AAC66448.1| (AE001119) conserved hypothetical protein [Borrelia burgdorferi]
Length = 155
Score = 48.5 bits (114), Expect = 1e-05
Identities = 33/112 (29%), Positives = 55/112 (48%), Gaps = 14/112 (12%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFP-----------LEAIPHTPLGSVVINAPL 78
+ ++L + I+E+N R + TDVLSF ++ I + G +VI+
Sbjct: 39 LSVILCDNAYIQELNNKFRNKNEPTDVLSFNYNEHNELNEDLVDGINYKIQGDLVISFEY 98
Query: 79 AQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQKESELIKAFNL 130
+ +A + + E+ + IHG+LHL+GY HE + QKE LI N+
Sbjct: 99 LKFSAQEFNVEIYEELQRVTIHGILHLMGYKHETN---DFQKEGMLILQENI 147
>pir||T46748 hypothetical protein [imported] - Treponema hyodysenteriae
emb|CAA51656.1| (X73141) ORF [Brachyspira hyodysenteriae]
Length = 141
Score = 48.1 bits (113), Expect = 2e-05
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 7/100 (7%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAIPHTPLGSVVINAPLAQTNALKLGHS 89
+ L+ DE I+ +N+ R D ATDVL+FP+ I G +VI+ T
Sbjct: 35 VNLLFCDDEYIKNLNRQFRNKDKATDVLTFPMGDINEG--GDIVISYEWVVTR--YSDEK 90
Query: 90 LENEIALLFIHGVLHLLGYDH---EKDKGEQRQKESELIK 126
++ + L IH +LHL G H K E +K EL K
Sbjct: 91 IKKTVLKLIIHSILHLKGIHHNYTRKSLMENNKKMKELYK 130
>pir||C36933 orf 5' of diacylglycerol kinase homolog - Streptococcus mutans
(fragment)
Length = 98
Score = 47.0 bits (110), Expect = 4e-05
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 69 LGSVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIK 126
+G + I+ A+ A + GHS E E+ L +HG LH+ GYDH +++ E + E++
Sbjct: 33 IGELFISVDKAREQAQEYGHSFEREMGFLAVHGFLHINGYDHYTPQEEKEMFSLQEEILD 92
Query: 127 AFNL 130
A+ L
Sbjct: 93 AYGL 96
>ref|NP_221093.1| (NC_000963) unknown [Rickettsia prowazekii]
sp|O05960|Y741_RICPR Hypothetical protein RP741
pir||A71634 hypothetical protein RP741 - Rickettsia prowazekii
emb|CAA72455.1| (Y11778) hypothetical protein [Rickettsia prowazekii]
emb|CAA15169.1| (AJ235273) unknown [Rickettsia prowazekii]
Length = 180
Score = 47.0 bits (110), Expect = 4e-05
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFP------------LEAIPHTP---LGSVVI 74
+ ++L + I +N+ R + AT+VLSFP LE + ++ LG +
Sbjct: 59 LSILLTNTAEILTLNQQFRSIEKATNVLSFPNNELNWHNLYSKLEFLYYSDYMHLGDIAF 118
Query: 75 NAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKDKGE--QRQKESELIKAFNLP 131
+ + + + EN + IH +LHL+G+DH+ D E E++ F +P
Sbjct: 119 CYEVIYNESCEQQKTFENHFIHMLIHSILHLIGFDHQNDTDANIMESLEIEILSYFGIP 177
>ref|NP_267242.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
gb|AAK05184.1|AE006341_3 (AE006341) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
Length = 162
Score = 46.6 bits (109), Expect = 5e-05
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 21/122 (17%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSF-----------------PLEAIPHTP--LG 70
+ + V + E+N R D TDV+S P E + +G
Sbjct: 39 MSVTFVDNARSHELNLQYRETDRPTDVISLEYKPDESEFFFDEDMELPEELLEEMDPFIG 98
Query: 71 SVVINAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDH--EKDKGEQRQKESELIKAF 128
+ I+ A A GHS+E E L +HG LH+ GYDH +++ E + E++ A+
Sbjct: 99 ELFISIDKAAEQAADYGHSIEREYGWLAVHGFLHINGYDHYTPEEESEMFGLQEEILTAY 158
Query: 129 NL 130
L
Sbjct: 159 GL 160
>ref|NP_360779.1| (NC_003103) unknown [Rickettsia conorii]
gb|AAL03680.1| (AE008663) unknown [Rickettsia conorii]
Length = 167
Score = 46.2 bits (108), Expect = 6e-05
Identities = 26/99 (26%), Positives = 44/99 (44%), Gaps = 15/99 (15%)
Query: 30 IELVLVSDETIREINKDLRGCDYATDVLSFPLEAI---------------PHTPLGSVVI 74
+ ++L + I +NK R + AT+VLSFP + + LG +
Sbjct: 46 LSILLTNAAEILTLNKQFRNIEKATNVLSFPSNELNWQDLYSKLEFLGDSDYMHLGDIAF 105
Query: 75 NAPLAQTNALKLGHSLENEIALLFIHGVLHLLGYDHEKD 113
+ + + + EN L IH +LHL+G+DH+ D
Sbjct: 106 CYEVIYNESCEQHKTFENHFIHLLIHSILHLIGFDHQND 144
>ref|NP_224705.1| (NC_000922) predicted Metalloenzyme [Chlamydophila pneumoniae
CWL029]
ref|NP_300564.1| (NC_002491) metalloenzyme [Chlamydophila pneumoniae J138]
ref|NP_444796.1| (NC_002179) conserved hypothetical protein [Chlamydophila
pneumoniae AR39]
pir||C72069 conserved hypothetical protein CP0245 [imported] - Chlamydophila
pneumoniae (strains CWL029 and AR39)
gb|AAD18649.1| (AE001636) predicted Metalloenzyme [Chlamydophila pneumoniae
CWL029]
gb|AAF38109.1| (AE002185) conserved hypothetical protein [Chlamydophila pneumoniae
AR39]
dbj|BAA98715.1| (AP002546) metalloenzyme [Chlamydophila pneumoniae J138]
Length = 158
Score = 42.4 bits (98), Expect = 9e-04
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 15 LLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFPLEA-----IPHTPL 69
L+L + ++ T I + + D+ + E++ + TD ++ P++A PH L
Sbjct: 27 LVLTLLEHLKVTTNEIFIYFLEDKALAELHDKVFADPSLTDTITLPIDAPGDPAYPHV-L 85
Query: 70 GSVVINAPLAQT---NALKLGHSLENEIALLFIHGVLHLLGYD--HEKDKGEQRQKESEL 124
G I+ A N + EI+ +H +LH+LGYD ++K + R KE+++
Sbjct: 86 GEAFISPQAALRFLENTSPNQEDIYEEISRYLVHSILHMLGYDDTSSEEKRKMRVKENQI 145
Query: 125 I 125
+
Sbjct: 146 L 146
>ref|NP_297079.1| (NC_002620) conserved hypothetical protein [Chlamydia muridarum]
pir||B81674 conserved hypothetical protein TC0705 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39519.1| (AE002339) conserved hypothetical protein [Chlamydia muridarum]
Length = 161
Score = 40.8 bits (94), Expect = 0.003
Identities = 28/116 (24%), Positives = 58/116 (49%), Gaps = 12/116 (10%)
Query: 14 FLLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFPLE-----AIPHTP 68
FL L+K++ T + + +SD + +++ + TD ++ P++ + PH
Sbjct: 34 FLELQKVS-----TDQVYIYFLSDAALAQLHDEQFSDPSLTDTITLPIDRPGIQSFPHV- 87
Query: 69 LGSVVINAPLAQTNALKLGHS-LENEIALLFIHGVLHLLGYDHEKDKGEQRQKESE 123
LG ++ A + + L +EI+ +H +LH+LGYD + D+ ++ +E E
Sbjct: 88 LGEAFVSPRAAMRFLGQYTEAQLYHEISRYVVHSLLHMLGYDDQTDEDKRIMREQE 143
>ref|NP_219934.1| (NC_000117) possible metalloenzyme [Chlamydia trachomatis]
pir||F71515 probable (metalloenzyme) - Chlamydia trachomatis (serotype D,
strain UW3/Cx)
gb|AAC68019.1| (AE001316) possible metalloenzyme [Chlamydia trachomatis]
Length = 161
Score = 39.7 bits (91), Expect = 0.006
Identities = 29/117 (24%), Positives = 58/117 (48%), Gaps = 14/117 (11%)
Query: 14 FLLLEKIANVLAPTQIIELVLVSDETIREINKDLRGCDYATDVLSFPLE-----AIPHTP 68
FL L+K++ T + + + D + +++ + TD ++ P++ + PH
Sbjct: 34 FLELQKVS-----TDQVYVYFLDDTALAQLHDEQFSDPSPTDTITLPIDKPGIASFPHV- 87
Query: 69 LGSVVINAPLAQTNALK--LGHSLENEIALLFIHGVLHLLGYDHEKDKGEQRQKESE 123
LG ++ P A L+ L +EI+ +H +LH+LGYD + D+ ++ +E E
Sbjct: 88 LGEAFVS-PKAAMRFLEQYTEDQLYHEISRYVVHSLLHMLGYDDQTDEDKRIMQEQE 143
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.317 0.138 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,799,847
Number of Sequences: 1026957
Number of extensions: 3146674
Number of successful extensions: 8173
Number of sequences better than 1.0e-02: 71
Number of HSP's better than 0.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 8058
Number of HSP's gapped (non-prelim): 74
length of query: 140
length of database: 324,149,939
effective HSP length: 116
effective length of query: 24
effective length of database: 205,022,927
effective search space: 4920550248
effective search space used: 4920550248
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 89 (38.9 bits)