BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644747|ref|NP_206917.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(308 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_206917.1| (NC_000915) conserved hypothetical protein... 600 e-171
ref|NP_222830.1| (NC_000921) putative [Helicobacter pylori ... 578 e-164
ref|NP_282391.1| (NC_002163) hypothetical protein Cj1244 [C... 218 9e-56
ref|NP_662326.1| (NC_002932) MoaA/NifB/PqqE family protein ... 147 1e-34
ref|NP_348248.1| (NC_003030) Predicted Fe-S oxidoreductase ... 145 6e-34
ref|NP_248312.1| (NC_000909) conserved hypothetical protein... 131 8e-30
ref|NP_229092.1| (NC_000853) conserved hypothetical protein... 128 9e-29
ref|NP_126544.1| (NC_000868) hypothetical protein [Pyrococc... 120 2e-26
ref|NP_603034.1| (NC_003454) Fe-S oxidoreductase [Fusobacte... 118 1e-25
ref|NP_142898.1| (NC_000961) hypothetical protein [Pyrococc... 117 2e-25
ref|NP_394917.1| (NC_002578) conserved hypothetical protein... 115 6e-25
ref|NP_071264.1| (NC_000917) conserved hypothetical protein... 106 4e-22
ref|NP_442852.1| (NC_000911) hypothetical protein [Synechoc... 102 4e-21
ref|NP_633474.1| (NC_003901) Fe-S oxidoreductase [Methanosa... 100 2e-20
ref|NP_615133.1| (NC_003552) conserved hypothetical protein... 99 6e-20
ref|NP_484773.1| (NC_003272) hypothetical protein [Nostoc s... 99 8e-20
ref|NP_614341.1| (NC_003551) Fe-S oxidoreductase [Methanopy... 92 1e-17
ref|NP_577819.1| (NC_003413) molybdenum cofactor biosynthes... 61 1e-08
ref|NP_142124.1| (NC_000961) molybdenum cofactor biosynthes... 58 2e-07
ref|NP_125805.1| (NC_000868) molybdenum cofactor biosynthes... 57 3e-07
ref|NP_558716.1| (NC_003364) metallo cofactor biosynthesis ... 53 4e-06
ref|NP_579357.1| (NC_003413) hypothetical protein [Pyrococc... 51 1e-05
ref|NP_248655.1| (NC_000909) coenzyme PQQ synthesis protein... 51 2e-05
ref|NP_470376.1| (NC_003212) similar to molybdenum cofactor... 50 2e-05
ref|NP_223423.1| (NC_000921) MOLYBDOPTERIN COFACTOR BIOSYNT... 49 5e-05
ref|NP_207561.1| (NC_000915) molybdenum cofactor biosynthes... 49 7e-05
ref|NP_464572.1| (NC_003210) similar to molybdenum cofactor... 49 9e-05
ref|NP_126242.1| (NC_000868) MOLYBDENUM COFACTOR BIOSYNTHES... 49 9e-05
ref|NP_615014.1| (NC_003552) conserved hypothetical protein... 47 2e-04
ref|XP_128632.1| (XM_128632) similar to molybdenum cofactor... 47 2e-04
ref|NP_143468.1| (NC_000961) hypothetical protein [Pyrococc... 47 3e-04
ref|NP_633370.1| (NC_003901) Fe-S oxidoreductase [Methanosa... 46 5e-04
ref|NP_391551.1| (NC_000964) alternate gene name: narAB [Ba... 46 5e-04
ref|XP_166358.1| (XM_166358) molybdenum cofactor synthesis ... 46 6e-04
gb|AAB87523.1| (AF034374) molybdenum cofactor biosynthesis ... 46 6e-04
ref|NP_247067.1| (NC_000909) conserved hypothetical protein... 45 8e-04
emb|CAC40787.1| (AJ291988) MoaA protein [Eubacterium acidam... 45 0.001
ref|NP_662220.1| (NC_002932) molybdenum cofactor biosynthes... 45 0.001
ref|NP_578031.1| (NC_003413) co-factor modifying protein [P... 45 0.001
ref|NP_143549.1| (NC_000961) hypothetical protein [Pyrococc... 45 0.001
ref|NP_577916.1| (NC_003413) putative cofactor synthesis pr... 45 0.001
ref|NP_378170.1| (NC_003106) 323aa long hypothetical molybd... 44 0.002
ref|XP_137874.1| (XM_137874) similar to KIAA0336 gene produ... 44 0.002
ref|NP_143792.1| (NC_000961) hypothetical protein [Pyrococc... 44 0.002
ref|NP_071086.1| (NC_000917) conserved hypothetical protein... 44 0.002
ref|NP_247229.1| (NC_000909) conserved hypothetical protein... 44 0.002
ref|NP_579447.1| (NC_003413) hypothetical protein [Pyrococc... 44 0.002
ref|NP_248642.1| (NC_000909) coenzyme PQQ synthesis protein... 44 0.003
ref|NP_111571.1| (NC_002689) Molybdenum cofactor biosynthes... 44 0.003
ref|NP_147692.1| (NC_000854) hypothetical protein [Aeropyru... 43 0.004
ref|NP_469827.1| (NC_003212) similar to conserved hypotheti... 42 0.009
ref|NP_487905.1| (NC_003272) molybdenum cofactor biosynthes... 42 0.009
ref|NP_464010.1| (NC_003210) similar to conserved hypotheti... 42 0.009
>ref|NP_206917.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|P56080|Y117_HELPY Hypothetical protein HP0117
pir||E64534 conserved hypothetical protein HP0117 - Helicobacter pylori
(strain 26695)
gb|AAD07185.1| (AE000533) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 308
Score = 600 bits (1547), Expect = e-171
Identities = 308/308 (100%), Positives = 308/308 (100%)
Query: 1 MAKENPPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETL 60
MAKENPPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETL
Sbjct: 1 MAKENPPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETL 60
Query: 61 INAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEP 120
INAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEP
Sbjct: 61 INAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEP 120
Query: 121 KVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLI 180
KVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLI
Sbjct: 121 KVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLI 180
Query: 181 KGVNDSANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL 240
KGVNDSANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL
Sbjct: 181 KGVNDSANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL 240
Query: 241 PKRSITQAKKLISCGIDELLALISRRPLSAEEAPLILDSNAFKHLETLLNHKQITIKKVG 300
PKRSITQAKKLISCGIDELLALISRRPLSAEEAPLILDSNAFKHLETLLNHKQITIKKVG
Sbjct: 241 PKRSITQAKKLISCGIDELLALISRRPLSAEEAPLILDSNAFKHLETLLNHKQITIKKVG 300
Query: 301 SLEFYCAF 308
SLEFYCAF
Sbjct: 301 SLEFYCAF 308
>ref|NP_222830.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZMV6|Y117_HELPJ Hypothetical protein JHP0109
pir||C71972 hypothetical protein jhp0109 - Helicobacter pylori (strain J99)
gb|AAD05696.1| (AE001450) putative [Helicobacter pylori J99]
Length = 308
Score = 578 bits (1491), Expect = e-164
Identities = 297/308 (96%), Positives = 300/308 (96%)
Query: 1 MAKENPPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETL 60
MAKEN PIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETL
Sbjct: 1 MAKENLPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETL 60
Query: 61 INAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEP 120
I+ IQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEP
Sbjct: 61 ISTIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEP 120
Query: 121 KVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLI 180
KVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGIL FSQIYQGQLVAEVLLI
Sbjct: 121 KVQQALKEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILSFSQIYQGQLVAEVLLI 180
Query: 181 KGVNDSANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL 240
KGVNDSANNLKLIA FLK+IN ARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL
Sbjct: 181 KGVNDSANNLKLIADFLKKINTARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSL 240
Query: 241 PKRSITQAKKLISCGIDELLALISRRPLSAEEAPLILDSNAFKHLETLLNHKQITIKKVG 300
PKRS QAKKL+SCGIDELLALISRRPLSAEEAPLILD NAFKHLETLLNHKQITIKKVG
Sbjct: 241 PKRSTAQAKKLVSCGIDELLALISRRPLSAEEAPLILDPNAFKHLETLLNHKQITIKKVG 300
Query: 301 SLEFYCAF 308
SLEFYCAF
Sbjct: 301 SLEFYCAF 308
>ref|NP_282391.1| (NC_002163) hypothetical protein Cj1244 [Campylobacter jejuni]
pir||F81331 hypothetical protein Cj1244 [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73498.1| (AL139077) hypothetical protein Cj1244 [Campylobacter jejuni]
Length = 300
Score = 218 bits (554), Expect = 9e-56
Identities = 120/299 (40%), Positives = 182/299 (60%), Gaps = 4/299 (1%)
Query: 8 IVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNA 67
I+FGPV SRRFG+SLG+DLSPSKKQCN++C+YCEL K E+ +E+I ++ +I+ ++ A
Sbjct: 3 ILFGPVSSRRFGRSLGIDLSPSKKQCNFDCVYCELDPKKAQEKQDEIISIDKIISEVK-A 61
Query: 68 LNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALK 127
+ D LT+TANGEP+LYP+L ELI S++ K K LILSNG+ + AL
Sbjct: 62 MLEKNVEFDFLTLTANGEPSLYPYLNELILSLRSIAKDKKLLILSNGTAVLDEDKFNALL 121
Query: 128 EFDIVKFSLDAIDLKAFERVDKPYSK-DINKILEGILRFSQIYQGQLVAEVLLIKGVNDS 186
+ D+VKFSLD+ K F R+D+ D+ K++E + F + G L+ E+L++K +ND+
Sbjct: 122 KLDVVKFSLDSAVAKTFYRIDRALKNIDLEKMIEKMADFRARFNGDLIMEILVVKDLNDN 181
Query: 187 ANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSIT 246
+ + LK+I RVDLSTIDRP ++ K+SE++LL+ S + V L KR
Sbjct: 182 EEEFEALNQALKKIMPLRVDLSTIDRPPAYAVKKVSEEKLLELSKLIDSTPVLLAKRHYE 241
Query: 247 QAKKLISCGIDELLALISRRPLSAEEAPLILDSNAFKHLETLLNHKQITIKKVGSLEFY 305
K +S +ELL ++ R S + + D + L L+ K++ I + ++FY
Sbjct: 242 GEK--LSFNEEELLKMLHLRSQSEIDIEVKFDEQSKTLLNQLIKEKKVKILDLAGVKFY 298
>ref|NP_662326.1| (NC_002932) MoaA/NifB/PqqE family protein [Chlorobium tepidum TLS]
gb|AAM72668.1| (AE012901) MoaA/NifB/PqqE family protein [Chlorobium tepidum TLS]
Length = 312
Score = 147 bits (371), Expect = 1e-34
Identities = 109/292 (37%), Positives = 158/292 (53%), Gaps = 20/292 (6%)
Query: 9 VFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPI--ERMEEVIKVETLINAIQN 66
VFGPV S+R G+SLGVDL PSK C +NCIYC+LG+ ER E K E L ++
Sbjct: 4 VFGPVSSKRLGQSLGVDLLPSKS-CTWNCIYCQLGRTTAFVTERREFFPKEEILSEILET 62
Query: 67 ALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQAL 126
+ PID +T +GE TLY L LI +K K + +++NGSL +P+V++ L
Sbjct: 63 VASG--KPIDWITFVGSGETTLYKGLDWLIAEVKKISK-IPVAVITNGSLLSDPEVRREL 119
Query: 127 KEFDIVKFSLDAIDLKAFERVDKPYSK-DINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
E D V SL+A + FER+D+P K +EG+ F Q Y+G+L EV+LI+GVND
Sbjct: 120 LEADAVLPSLNAGSPELFERIDRPAPGFTFEKHVEGLRLFRQEYRGKLWVEVMLIRGVND 179
Query: 186 SANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSI 245
S LK +AA L +I + L RP+ + ++EL++ ++F L S P +
Sbjct: 180 SEEALKEMAAVLAEIRPDMIHLVMPTRPAPESFVGIPDEELIQRAVFV--LSSSAP--VL 235
Query: 246 TQAKKLISCG-----IDELLALISRRPLSAEEAPLIL----DSNAFKHLETL 288
AK ++ G +D + + SR P+ E L D +A K ET+
Sbjct: 236 HPAKGEMNLGSVGNLLDTVAGIASRHPVQERELEAALGKLFDGDAAKIRETM 287
>ref|NP_348248.1| (NC_003030) Predicted Fe-S oxidoreductase [Clostridium
acetobutylicum]
gb|AAK79588.1|AE007671_6 (AE007671) Predicted Fe-S oxidoreductase [Clostridium
acetobutylicum]
Length = 308
Score = 145 bits (366), Expect = 6e-34
Identities = 94/295 (31%), Positives = 160/295 (53%), Gaps = 12/295 (4%)
Query: 9 VFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPI-ERMEEVIKVETLINAIQNA 67
+FGP+ SRR G SLG+ S K+ C Y+C+YC+LG+ K + + ++ K E ++ +
Sbjct: 7 IFGPIPSRRMGNSLGIS-SIEKRSCTYSCVYCQLGRTKNLMKEPKKFFKTEDILEEFKEY 65
Query: 68 LNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALK 127
L IDV+T+ GEPTL L ELI +K + +++NGS+ KV++ALK
Sbjct: 66 LKE-DVDIDVVTVVGEGEPTLSDDLEELILGLKA-ITDKPVAVITNGSMLVYEKVRKALK 123
Query: 128 EFDIVKFSLDAIDLKAFERVDKPYSK-DINKILEGILRFSQIYQGQLVAEVLLIKGVNDS 186
DIV SLDA D + F ++++P +K D NKI E +++FS+ Y G+L E +++KG ND
Sbjct: 124 AADIVLPSLDAGDEETFRKINRPNAKIDFNKITEALVQFSKEYNGELWMETMIVKGFNDK 183
Query: 187 ANNLKLIAAFLKQINIARVDLST-IDRPSSFKAPKLSEDELLKCSLFFEGLCVSLPKRSI 245
L I L +I+ R+ ++T + P+ + S+++L + G + +
Sbjct: 184 TEELYAIRKILDRIDYDRLYINTPVRPPAESYVEEPSKEKLDEVIRILRGTSIQMLSSGT 243
Query: 246 TQAKKLISCGIDELLALISRRPLSAEEAPLILDSNAFKHLETLL----NHKQITI 296
++ I+ + + ++ISR P++ E L+S + E +L NH I +
Sbjct: 244 FFSE--ITDDFEAIKSIISRHPMNKFEVESFLNSRKCRDKEEVLRKLKNHADIDV 296
>ref|NP_248312.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58708|YD12_METJA Hypothetical protein MJ1312
pir||G64463 hypothetical protein MJ1312 - Methanococcus jannaschii
gb|AAB99319.1| (U67571) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 321
Score = 131 bits (330), Expect = 8e-30
Identities = 78/222 (35%), Positives = 132/222 (59%), Gaps = 13/222 (5%)
Query: 8 IVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKA--KPIERMEEVIKVETLINAIQ 65
I FGPV SRR GKSLG++ P K C+Y+C+YC++G+ K IER E E + +++
Sbjct: 3 IAFGPVPSRRLGKSLGINSIPCKF-CSYDCVYCQVGRTINKTIER-REFYSPEDIFKSVE 60
Query: 66 NALNNLTTP-IDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQ 124
+ L ID LT A+GEPTL +L + ++ ++ F + I++N SL + V+
Sbjct: 61 ERIGKLNNEKIDYLTFVADGEPTLDINLSKEVEMLRDF--DIPIAIITNSSLIWREDVRN 118
Query: 125 ALKEFDIVKFSLDAIDLKAFERVDKPYSKDI--NKILEGILRFSQIYQGQLVAEVLLIKG 182
+ FD+V F +D++D K + +++P+ KD+ +KILEG++ F Y+G+L+ E +++
Sbjct: 119 DILNFDLVSFKVDSVDEKIWREINRPH-KDLVLDKILEGMIAFRDNYKGELITETMILGS 177
Query: 183 VNDSANNLKLIAAFLKQINIARVDLSTIDRPSS---FKAPKL 221
+ + ++ A FLK++N + L+T RP S K PK+
Sbjct: 178 IKYTEESIIKTAEFLKELNPNKCYLNTPIRPPSEKYIKPPKI 219
>ref|NP_229092.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||G72271 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD36362.1|AE001784_4 (AE001784) conserved hypothetical protein [Thermotoga maritima]
Length = 308
Score = 128 bits (321), Expect = 9e-29
Identities = 93/305 (30%), Positives = 154/305 (50%), Gaps = 17/305 (5%)
Query: 9 VFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIE-RMEEVIKVETLINAIQNA 67
V+G V S+R G+SLGV P K C Y+C+YC+LG+ + + ++ ++
Sbjct: 7 VYGIVPSKRLGRSLGVSPIPFKT-CTYSCVYCQLGRTTNFTVKRQTFFPLKVFEEELKGF 65
Query: 68 LNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALK 127
+ DV++I GEPTLY L LI K + G ++++NGSLF+ KV++ K
Sbjct: 66 VKRHRYDFDVVSIVGEGEPTLYTPLDALIDLCKS-ITGKPVVLITNGSLFWSEKVRKEAK 124
Query: 128 EFDIVKFSLDAIDLKAFERVDKPYSK-DINKILEGILRFSQIYQGQLVAEVLLIKGVNDS 186
DI+ +L A D K+F + KP+ K+ EG+ +F + Y G++ EV+L+KG+ND
Sbjct: 125 LSDIIMPTLSAWDEKSFRTIHKPHKNLSFQKVFEGLKKFRREYSGEIWLEVMLVKGLNDF 184
Query: 187 ANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELL-KCSLFFEGLCVSLPKRSI 245
A L+ + + Q+ RV ++ RP + + ++E + K F + P
Sbjct: 185 A--LEELKEKISQVESDRVYVNVPVRPPAEGWVEPPDEETIEKAKELFNAASIETP---- 238
Query: 246 TQAKKLISC--GIDELLALISRRPLSAEEAPLILDSNAFKH---LETLLNHKQITIKKVG 300
A + I+ GID +L +I R P++ EE +L S LE L + K + I +
Sbjct: 239 -AASRFIAAGEGIDAVLNVIKRHPMNEEEVRDLLTSQKIDPKPVLEKLRSCKNVKIIEYS 297
Query: 301 SLEFY 305
+Y
Sbjct: 298 GRRYY 302
>ref|NP_126544.1| (NC_000868) hypothetical protein [Pyrococcus abyssi]
pir||F75132 hypothetical protein PAB0577 - Pyrococcus abyssi (strain Orsay)
emb|CAB49775.1| (AJ248285) hypothetical protein [Pyrococcus abyssi]
Length = 314
Score = 120 bits (301), Expect = 2e-26
Identities = 81/236 (34%), Positives = 129/236 (54%), Gaps = 12/236 (5%)
Query: 8 IVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIE-RMEEVIKVETLINAIQN 66
I FGPV SRR G+SLGV+ P K C+Y C+YC++GK ++ +E + ++
Sbjct: 2 IAFGPVPSRRLGRSLGVNNIPDKV-CSYACVYCQIGKTIKMQVERQEFYDPNKIFEEVER 60
Query: 67 ALNNLTTP---IDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQ 123
+ T ID +T +GEPTL +L + +K G+K IL+N SL + V+
Sbjct: 61 KVREATERGERIDYVTFVPDGEPTLDINLGKEAGLLKDL--GIKLAILTNSSLVWREDVR 118
Query: 124 QALKEFDIVKFSLDAIDLKAFERVDKPY-SKDINKILEGILRFSQIYQGQLVAEVLLIKG 182
L+ FD++ LDA+ K + RVD+P+ S + KILEG+L +QG+L+ E +LI
Sbjct: 119 DDLQNFDLISLKLDAVTEKIWRRVDRPHKSLKLEKILEGMLILRDEFQGKLITETMLIN- 177
Query: 183 VNDSANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDEL--LKCSLFFEGL 236
+ N L+ IA FL+++ + ++ RP + K K + +E+ L LF E +
Sbjct: 178 -INYGNELERIADFLRELKPDKAYIAIPTRPPAEKWVKPASEEVIHLAYQLFAEAI 232
>ref|NP_603034.1| (NC_003454) Fe-S oxidoreductase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gb|AAL94333.1| (AE010526) Fe-S oxidoreductase [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 284
Score = 118 bits (295), Expect = 1e-25
Identities = 81/233 (34%), Positives = 132/233 (55%), Gaps = 10/233 (4%)
Query: 9 VFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIK-VETLINAIQNA 67
VFGPV SRR G SLGVDL S K CN NCI+CE G K I+ + K ++ ++N IQ+
Sbjct: 5 VFGPVPSRRLGISLGVDLVVS-KSCNLNCIFCECGATKKIQLERQRFKDMDEILNEIQSV 63
Query: 68 LNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLK-GVKTLILSNGSLFYEPKVQQAL 126
L N+ D +T + +GEPTL L + ++IK LK K +++N L +V + L
Sbjct: 64 LKNIKP--DYITFSGSGEPTLSLDLGNISKAIKEDLKYKGKICLITNSLLLANNQVIKEL 121
Query: 127 KEFDIVKFSLDAIDLKAFERVDKP-YSKDINKILEGILRFSQI-YQGQLVAEVLLIKGVN 184
+ D++ +L+ + FE++ +P Y +++I +G + + Y+G++ E+ +++ +N
Sbjct: 122 EYIDLIVPTLNTLKQDIFEKIVRPDYRTSVDEIKKGFVNLNNSNYKGKIWIEIFILENIN 181
Query: 185 DSANNLKLIAAFLKQINIA--RVDLSTIDRPSSFKAPK-LSEDELLKCSLFFE 234
DS N IA FL NI ++ L+TIDR + + K +S D++ K E
Sbjct: 182 DSEENFIEIANFLNLENIRYDKIQLNTIDRVGAERDLKAISFDKIFKAKKILE 234
>ref|NP_142898.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||H71089 hypothetical protein PH0981 - Pyrococcus horikoshii
dbj|BAA30078.1| (AP000004) 309aa long hypothetical protein [Pyrococcus horikoshii]
Length = 309
Score = 117 bits (293), Expect = 2e-25
Identities = 77/233 (33%), Positives = 130/233 (55%), Gaps = 10/233 (4%)
Query: 8 IVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIE-RMEEVIKVETLINAIQN 66
+ FGPV SRR G+SLGV+ P+K C+Y C+YC++GK +E + + E + N +
Sbjct: 2 LAFGPVPSRRLGRSLGVNNIPAKI-CSYACVYCQIGKTLKMEVERRKFYEPERIYNDVSA 60
Query: 67 ALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQAL 126
+ + ID +T +GEPTL +L + + ++ F G+K IL+N SL + V++ L
Sbjct: 61 KVKS-GERIDYITFVPDGEPTLDINLGKEAEMLRDF--GIKLAILTNSSLIWREDVREDL 117
Query: 127 KEFDIVKFSLDAIDLKAFERVDKPY-SKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
FD+V LDA+ + +V++P+ S + KILEG+L F + ++G ++ E +LI D
Sbjct: 118 MNFDLVSLKLDAVSDDIWRKVNRPHKSLSLEKILEGMLDFRKEFKGTIITETMLIN--ID 175
Query: 186 SANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLK--CSLFFEGL 236
L+ IA FLK++ + ++ RP + K + + ++ LF E L
Sbjct: 176 YGEELEKIATFLKELKPDKAYIAIPTRPPAESWVKPASEVIINKAYQLFSEAL 228
>ref|NP_394917.1| (NC_002578) conserved hypothetical protein [Thermoplasma
acidophilum]
emb|CAC12584.1| (AL445067) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 325
Score = 115 bits (288), Expect = 6e-25
Identities = 76/231 (32%), Positives = 133/231 (56%), Gaps = 14/231 (6%)
Query: 8 IVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIE-RMEEVIKVETLINAIQN 66
++FGPV SRR G SLGV+ P +K C+Y+C+YC++G+ + +E + +++A+
Sbjct: 6 LLFGPVPSRRLGFSLGVNNIP-RKICSYSCVYCQIGRTINFSIKRQEFYSTDDILDALTR 64
Query: 67 ALNNLTTP---IDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQ 123
+ + T ID +T +GEPTL +L + I++IK G+K ++SN SL V
Sbjct: 65 KIEEVRTGGGRIDYVTFVPDGEPTLDVNLGKHIEAIKS--TGMKVAVISNASLIDNEDVA 122
Query: 124 QALKEFDIVKFSLDAIDLKAFERVDKPY-SKDINKILEGILRFSQIYQGQLVAEVLLIKG 182
L + D V +DAID ++ +D+P+ S + + IL+GI +FS+ Y G L E +L+ G
Sbjct: 123 SDLMDADWVSLKVDAIDDVKWKIIDRPHGSLNHSIILDGIRKFSEKYHGILATETMLVDG 182
Query: 183 VNDSANNLKLIAAF---LKQINIARVDLSTIDRPSSFKAPKLSEDELLKCS 230
+ D + +IA + L+++++A + + T RP + + K DEL+ +
Sbjct: 183 IQD-LGEIHIIAEYLSSLRKLDLAYISVPT--RPPAEEYVKPPSDELINAA 230
>ref|NP_071264.1| (NC_000917) conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 281
Score = 106 bits (264), Expect = 4e-22
Identities = 68/230 (29%), Positives = 126/230 (54%), Gaps = 8/230 (3%)
Query: 8 IVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKA-KPIERMEEVIKVETLINAIQN 66
+VFGPV SRR G SLGV+ P K C+Y+C+YC+LG+ K E + + ++++++
Sbjct: 2 LVFGPVPSRRLGNSLGVNNIPF-KHCSYSCVYCQLGRTPKTTVERGEFYEPKDILDSVRR 60
Query: 67 ALNNL-TTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQA 125
++ + +D +T +GEPTL +L I +K + +++N SL + V+
Sbjct: 61 RIDAVRKEKVDYITFVPDGEPTLDKNLGAEISMLKDL---GRVAVVTNSSLLFMEDVRLE 117
Query: 126 LKEFDIVKFSLDAIDLKAFERVDKPY-SKDINKILEGILRFSQIYQGQLVAEVLLIKGVN 184
L ++V +DA+D + RV++P+ + + IL+GI +F++ Y G L+ E +LI G+
Sbjct: 118 LNLANLVSLKVDAVDELLWRRVNRPHPALKLEDILDGISKFAEDYNGTLITETMLIDGLT 177
Query: 185 DSANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSEDELLKCSLFFE 234
+ ++ IA FL+ ++ + L+ RP + D +L+ F+
Sbjct: 178 -TLEEVERIAEFLESVSPDKAYLAIPTRPPAENVRGAEIDFVLEAGRIFK 226
>ref|NP_442852.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|P74557|YE64_SYNY3 Hypothetical protein slr1464
pir||S76752 hypothetical protein - Synechocystis sp. (strain PCC 6803)
dbj|BAA18664.1| (D90916) ORF_ID:slr1464~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 265
Score = 102 bits (255), Expect = 4e-21
Identities = 62/208 (29%), Positives = 116/208 (54%), Gaps = 6/208 (2%)
Query: 7 PIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQN 66
P V+GPV S R+G+SLG+D + C++NC+YC+LG+ + + ++ + T + ++
Sbjct: 6 PAVYGPVNSWRYGRSLGIDPIGAISTCSFNCVYCQLGEIEHLSGDRQIF-IPT-ADILRE 63
Query: 67 ALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQAL 126
+DV+T++ +GEPTL +L E+++ IK L G TL+L+N +L + +V++ L
Sbjct: 64 LAQFAPWEVDVITLSGSGEPTLAKNLGEILEGIKK-LTGKLTLVLTNATLLNDAQVREEL 122
Query: 127 KEFDIVKFSLDAIDLKAFERVDKPYSK-DINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
D + LD + +R+++P + ++ +IL GI F Q + G+L + ++++ +
Sbjct: 123 SLADKISVKLDGLWPDQLQRINRPIAGIELEQILTGIQTFQQEFTGELSVQTMVLQPWDQ 182
Query: 186 SANNLKLIAAFLKQINIARVDLSTIDRP 213
+ N L L I V L+ RP
Sbjct: 183 TTENRYL--ELLSLIKPTEVQLNRPTRP 208
>ref|NP_633474.1| (NC_003901) Fe-S oxidoreductase [Methanosarcina mazei Goe1]
gb|AAM31146.1| (AE013379) Fe-S oxidoreductase [Methanosarcina mazei Goe1]
Length = 326
Score = 100 bits (249), Expect = 2e-20
Identities = 89/317 (28%), Positives = 167/317 (52%), Gaps = 27/317 (8%)
Query: 8 IVFGPVLSRRFGKSLGVDL---SPSKKQCNYNCIYCELG----KAKPIERMEEVIKVETL 60
IV+GP+LSRR G+SLG+D+ + SKK CNY+CIYC+LG K E ++E + + +
Sbjct: 5 IVYGPILSRRLGRSLGIDVIKNTGSKKNCNYDCIYCQLGHVELKLGSPEDVKEAVTPKEV 64
Query: 61 INAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEP 120
+ + ++ +D +T + EP+L L E+IQSI+ + GV +++N SL
Sbjct: 65 SESFEKFYKDV-EGLDYITFSGTCEPSLNLSLGEMIQSIRE-ISGVPVCVITNSSLMGRE 122
Query: 121 KVQQALKEFDIVKFSLDAIDLKAFERVDKPY-SKDINKILEGILRFSQIYQG-QLVAEVL 178
V++ L + D+V +L + K + ++ +P + +I+EG+ ++ G +L EV+
Sbjct: 123 DVRKNLSQADLVVATLVSGIEKTWRKIHRPAPCINFQEIIEGLRELAKAGDGKKLALEVM 182
Query: 179 LIKG-----VNDSANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPK-LSEDELLKCSLF 232
++ +N + + + ++ I +++ TI RP + K K +SE+ L + +
Sbjct: 183 FLESETGEPLNSTDEEVDCLIKTIRYICPDEIEVLTISRPPAEKWVKPVSEERLREIADR 242
Query: 233 FEGLCVSLPKRSITQAKKLISCGI-----DELLALISRRPLSAEEA--PLILDSNAFKH- 284
F + R + + KK + + +E+ AL+ RRP + E+ L +D + +
Sbjct: 243 FISEFGAEKVRLVLKGKKKKAKVLHRDLEEEVYALLLRRPCTFEQTWQGLSIDPESLRPV 302
Query: 285 LETLLNHKQITIKKVGS 301
LE LL + I+++GS
Sbjct: 303 LEKLLAEGK--IEEIGS 317
>ref|NP_615133.1| (NC_003552) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM03613.1| (AE010673) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Length = 326
Score = 99.0 bits (245), Expect = 6e-20
Identities = 77/284 (27%), Positives = 146/284 (51%), Gaps = 20/284 (7%)
Query: 8 IVFGPVLSRRFGKSLGVDL---SPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAI 64
IV+GP+LSRR G+SLGVD+ + SKK CNY+CIYC+LG + E +K +
Sbjct: 5 IVYGPILSRRLGRSLGVDVIKNTGSKKNCNYDCIYCQLGHVESKLGSPEDVKEPVTSKEV 64
Query: 65 QNALNNLTTPI---DVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPK 121
+ N I D +T + EP+L L E+I++++ + G+ +++N SL
Sbjct: 65 SQSFRNFHKDIEGLDYVTFSGTCEPSLNLSLGEMIRAVRE-IGGIPVCVITNSSLVGRED 123
Query: 122 VQQALKEFDIVKFSLDAIDLKAFERVDKPYSK-DINKILEGILRFSQIYQG-QLVAEVLL 179
V++ L + D++ +L + + + ++ +P S + +I+EG+ ++ G +L EV+
Sbjct: 124 VRKNLAQADLIVATLVSGNENTWRKIHRPASGIALQEIIEGLRELAKGGAGKKLALEVMF 183
Query: 180 I-----KGVNDSANNLKLIAAFLKQINIARVDLSTIDRPSSFK-APKLSEDELLKCSLFF 233
+ K +N + ++ + A ++ I +++ T+ RP + K +SE+ L + + F
Sbjct: 184 LESEAGKPLNSTDEEVESLIATIRYICPDEIEILTVSRPPAEKWVRPVSEERLREIAKRF 243
Query: 234 EGLCVSLPKRSITQAKKLISCGI-----DELLALISRRPLSAEE 272
R + + K S + +E+ AL+ RRP + E+
Sbjct: 244 VSEFGEEKVRLVLKGKNKRSRVLHRELDEEVYALLLRRPCTFEQ 287
>ref|NP_484773.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB72687.1| (AP003583) ORF_ID:alr0730~hypothetical protein [Nostoc sp. PCC
7120]
Length = 270
Score = 98.6 bits (244), Expect = 8e-20
Identities = 61/206 (29%), Positives = 112/206 (53%), Gaps = 5/206 (2%)
Query: 9 VFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNAL 68
V+GPV S RFG SLG+D C++NC+YC+LG+ + ++ + + AL
Sbjct: 15 VYGPVKSWRFGNSLGIDPIGVVSTCSFNCVYCQLGQIQTHTSQRQIFVPTSQLWEDLQAL 74
Query: 69 NNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKE 128
+DV+T++ +GEPTL +L E++ K + T++L+N +L + KV+ AL+
Sbjct: 75 APY-DQVDVVTLSGSGEPTLALNLEEILAIAKQVTQR-PTVVLTNSTLLSDIKVRHALQS 132
Query: 129 FDIVKFSLDAIDLKAFERVDKPYSK-DINKILEGILRFSQIYQGQLVAEVLLIKGVNDSA 187
DIV LDAI +R+++P + + I+ GI +F + YQG L + +++ +
Sbjct: 133 ADIVAVKLDAISSNQLQRINQPVATIKLPHIMAGIEQFREEYQGNLAIQTMVLSPW--TT 190
Query: 188 NNLKLIAAFLKQINIARVDLSTIDRP 213
+++ ++++N + L+ RP
Sbjct: 191 EMIEIYIQKIERLNPQEIQLNVPTRP 216
>ref|NP_614341.1| (NC_003551) Fe-S oxidoreductase [Methanopyrus kandleri AV19]
gb|AAM02271.1| (AE010395) Fe-S oxidoreductase [Methanopyrus kandleri AV19]
Length = 322
Score = 91.7 bits (226), Expect = 1e-17
Identities = 68/233 (29%), Positives = 116/233 (49%), Gaps = 18/233 (7%)
Query: 2 AKENPPIVFGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLI 61
+++ P+V+GPV SRR G SLG+DL + C ++C YC +G ++ + E +
Sbjct: 84 SEDRRPLVYGPVPSRRLGTSLGIDL--PRGMCTHDCEYCSVGVSRRVSPHERFTVDPVAV 141
Query: 62 NAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGV--KTLILSNGSLFYE 119
+ P D +T GEPTL +L E+ + I+P ++GV + ++L+N +
Sbjct: 142 REELSETLRRCDP-DAVTFAGVGEPTLCANLREIAEEIRPLVEGVGAEVVLLTNSTW--- 197
Query: 120 PKVQQALKEFDIVKFSLDAIDLKAFERVDKPY-SKDINKILEGILRFSQIYQGQLVAEVL 178
V + D+ SLD + +++P+ + ++E SQ G +V EVL
Sbjct: 198 --VSECADVVDVAVASLDCAREDLYRTINRPHPDMSLEHLVE---ELSQCDPGDVVVEVL 252
Query: 179 LI---KGVNDSANNLKLIAAFLKQINIARVDLSTIDR-PSSFKAPKLSEDELL 227
L K N ++L+ +A L I + RV L+T+ R P+ +A + DELL
Sbjct: 253 LCRVGKITNADPDHLRELADLLGSIGLERVQLNTVARPPARGRAEPVGRDELL 305
>ref|NP_577819.1| (NC_003413) molybdenum cofactor biosynthesis protein; (moaA)
[Pyrococcus furiosus DSM 3638]
gb|AAL80214.1| (AE010135) molybdenum cofactor biosynthesis protein; (moaA)
[Pyrococcus furiosus DSM 3638]
Length = 307
Score = 61.2 bits (147), Expect = 1e-08
Identities = 53/224 (23%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 31 KQCNYNCIYCELGKAKPIERMEEVIKVETLIN-AIQNALNNLTTPIDVLTITANGEPTLY 89
K+CN NC YC + ER ++E ++ A + + N+ GEPT+
Sbjct: 19 KECNLNCFYCHREGQQDGERTMTPEEIERIVRIASRLGIRNVKL--------TGGEPTVR 70
Query: 90 PHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDK 149
P + E+IQ I+P++ V + +NG+ Y + D V SLD +D K ++ +
Sbjct: 71 PDIYEIIQRIRPYV--VDLSMTTNGTTLYASAEKLKEAGLDRVNISLDTLDRKKYKMITG 128
Query: 150 PYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFLKQINIARVDLST 209
++++L+GI R + ++ + +++++G+ND + + + F ++N A + L
Sbjct: 129 --YDVLDQVLKGIRRATNLFY-PVKLNMVVMRGIND--DEIWDMIRFAGEVN-AILQLIE 182
Query: 210 IDRPSSFKAPKLSED---ELLKCSLFFEGLCVSLPKRSITQAKK 250
I+ P + + +D L FE + V + +R + + +K
Sbjct: 183 IEVPREMENSQFFKDFFYPLKPLEEKFEKIAVEIRERKMHRRRK 226
>ref|NP_142124.1| (NC_000961) molybdenum cofactor biosynthesis protein [Pyrococcus
horikoshii]
sp|O57854|MOAA_PYRHO Putative molybdopterin cofactor synthesis protein A
pir||H71231 molybdopterin biosynthesis protein moaA - Pyrococcus horikoshii
dbj|BAA29183.1| (AP000001) 316aa long hypothetical molybdenum cofactor biosynthesis
protein [Pyrococcus horikoshii]
Length = 316
Score = 57.8 bits (138), Expect = 2e-07
Identities = 58/243 (23%), Positives = 117/243 (47%), Gaps = 22/243 (9%)
Query: 13 VLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLT 72
+L RFG+ + K+CN +C YC ER ++E ++
Sbjct: 7 MLIDRFGRPVTNLRISLTKECNLSCFYCHREGQLDGERFMTPEEIERIVRVASRL----- 61
Query: 73 TPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKE--FD 130
I + +T GEPT+ +LE+I+ +KP++ V + +NG+ Y + + LKE D
Sbjct: 62 -GIKKVKLTG-GEPTIRKDILEIIRRLKPYV--VDLSLTTNGTTMY--VLAEKLKEAGLD 115
Query: 131 IVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNL 190
V SLD +D K ++ + ++++++GI + ++++ + ++++KGVND + +
Sbjct: 116 RVNISLDTLDRKKYKMITG--FNVLDEVIKGIKKATKLFY-PVKLNMVVMKGVND--DEI 170
Query: 191 KLIAAFLKQINIARVDLSTIDRPSSFKAPKLSED---ELLKCSLFFEGLCVSLPKRSITQ 247
+ F ++N A + L ++ P + + +D L FE L V + +R + +
Sbjct: 171 WDMMRFAGEVN-AILQLIELEVPREMENSQFFKDFFYPLKPLEEKFEKLAVKVKERRMHR 229
Query: 248 AKK 250
+K
Sbjct: 230 RRK 232
>ref|NP_125805.1| (NC_000868) molybdenum cofactor biosynthesis protein [Pyrococcus
abyssi]
sp|Q9V2G2|MOAA_PYRAB Putative molybdopterin cofactor synthesis protein A
pir||E75198 molybdopterin biosynthesis protein moaA PAB2273 - Pyrococcus abyssi
(strain Orsay)
emb|CAB49036.1| (AJ248283) molybdenum cofactor biosynthesis protein (moaA)
[Pyrococcus abyssi]
Length = 306
Score = 56.6 bits (135), Expect = 3e-07
Identities = 58/243 (23%), Positives = 121/243 (48%), Gaps = 22/243 (9%)
Query: 13 VLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLT 72
+L RFG+ + K+CN NC YC ER + ++E ++ I + L
Sbjct: 1 MLIDRFGRPVTNLRISLTKECNLNCFYCHREGQLDGERTMKPEEIERIVR-IASRLG--- 56
Query: 73 TPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKE--FD 130
I + +T GEPT+ ++E+I+ I+P++ V + +NG+ Y + + LKE D
Sbjct: 57 --IKKVKLT-GGEPTIRKDIVEIIRRIRPYV--VDLSLTTNGTTLY--TLAEELKEAGLD 109
Query: 131 IVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNL 190
V SLD +D K ++ + ++++++GI + ++++ + +++++G+ND + +
Sbjct: 110 RVNISLDTLDRKKYKMITG--FDVLDQVIKGIEKATKLFY-PVKLNMVVMRGIND--DEI 164
Query: 191 KLIAAFLKQINIARVDLSTIDRPSSFKAPKLSED---ELLKCSLFFEGLCVSLPKRSITQ 247
+ F ++N A + L I+ P + + +D L FE + V + +R + +
Sbjct: 165 WDLIRFAGKVN-AILQLIEIEVPREMENSQFFKDFFYPLKPLEEEFEKIAVEIRERRMHR 223
Query: 248 AKK 250
+K
Sbjct: 224 RRK 226
>ref|NP_558716.1| (NC_003364) metallo cofactor biosynthesis protein [Pyrobaculum
aerophilum]
gb|AAL62898.1| (AE009775) metallo cofactor biosynthesis protein [Pyrobaculum
aerophilum]
Length = 346
Score = 53.1 bits (126), Expect = 4e-06
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 8/158 (5%)
Query: 33 CNYNCIYCELGKAKPIERM---EEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLY 89
C NCI+C + A P+ R+ E V++ E L++A++ + T + I G+P Y
Sbjct: 39 CALNCIFCSVN-AGPLSRVRWAEYVVEPEPLLSALEEVVRYKKTDDVEVHIDGMGDPGHY 97
Query: 90 PHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKF--SLDAIDLKAFERV 147
PHL +L++ K +KGV + + + + Q L + +F S+DA+D +++
Sbjct: 98 PHLAQLVRGAKS-IKGVALVSMQTRLYMLDKEAVQQLANAGLDRFNVSVDALDPALAKKL 156
Query: 148 DKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
D+ K LE +++ + ++ + + G+ND
Sbjct: 157 AGAEWYDVEKALE-LIKIALEAGINVIISPVWVPGLND 193
>ref|NP_579357.1| (NC_003413) hypothetical protein [Pyrococcus furiosus DSM 3638]
gb|AAL81752.1| (AE010262) hypothetical protein [Pyrococcus furiosus DSM 3638]
Length = 419
Score = 51.2 bits (121), Expect = 1e-05
Identities = 43/175 (24%), Positives = 80/175 (45%), Gaps = 7/175 (4%)
Query: 33 CNYNCIYCEL--GKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYP 90
CN +CI+C + G ++ V+ V+ L+ ++ + A GEP LYP
Sbjct: 125 CNLSCIFCSVDEGPYSRTRNLDFVVDVDYLMKWFDWVAKEKGKGLEA-HLDAQGEPLLYP 183
Query: 91 HLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQ-ALKEFDIVKFSLDAIDLKAFERVDK 149
+++EL+Q ++ + SNG L E V++ A D V S+ ++D + + +
Sbjct: 184 YIVELVQELRSHPHVSVISMQSNGVLLDEKLVEELAEAGLDRVNLSIHSLDPEKAKMLMG 243
Query: 150 PYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFLKQINIAR 204
+ D+N +LE L+A V++ G+ND N + F ++I +
Sbjct: 244 MKNYDLNHVLEMAEALVNAGIDVLIAPVIIF-GIND--NEAEAFIEFARRIGAGK 295
>ref|NP_248655.1| (NC_000909) coenzyme PQQ synthesis protein III isolog (Haemophilus
influenzae} [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
pir||C64505 coenzyme PQQ synthesis protein III homolog - Methanococcus
jannaschii
gb|AAB99666.1| (U67605) coenzyme PQQ synthesis protein III isolog (Haemophilus
influenzae} [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 243
Score = 50.8 bits (120), Expect = 2e-05
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 26/198 (13%)
Query: 33 CNYNCIYCELGKAKPIERMEEVI---KVETL----INAIQNALNNLTTPIDVLTITANGE 85
C NC+YC+ R+E++ + ETL I I NA++ L TP GE
Sbjct: 28 CPLNCVYCDEESKGYFNRVEKIPGSGEFETLQKMEIEDIINAIDKLKTPDLFAVSFTGGE 87
Query: 86 PTLY-PHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAF 144
P LY + E+ + +K KG +T + SNG +F E I F + +ID+K
Sbjct: 88 PLLYHKQIKEIAEILKD--KGYRTFLESNG-MFPE----------RIFYFDIASIDIKLK 134
Query: 145 ERVDKPYSKDINKILEGILR-FSQIY--QGQLVAEVLLIKGVNDSANNLKLIAAFLKQIN 201
E + +D K+ + L+ ++Y + A+V++++ N ++K+IA L I
Sbjct: 135 EHFEYIKDEDYEKLYKNELKTIKKLYNLNSDIYAKVVIMEETN--IEDVKIIAKDLSDIG 192
Query: 202 IARVDLSTIDRPSSFKAP 219
+ + + + K+P
Sbjct: 193 NITLCIQPVTPHGNIKSP 210
>ref|NP_470376.1| (NC_003212) similar to molybdenum cofactor biosynthesis protein A
[Listeria innocua]
emb|CAC96270.1| (AL596167) similar to molybdenum cofactor biosynthesis protein A
[Listeria innocua]
Length = 333
Score = 50.4 bits (119), Expect = 2e-05
Identities = 50/200 (25%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 32 QCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYPH 91
+CN C+YC + E+V+ + +++ ++ + I + IT GEP L
Sbjct: 22 RCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVK---FGIKKVRITG-GEPLLRTD 77
Query: 92 LLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDI--VKFSLDAIDLKAFERVDK 149
++E+++ + + I +N Y K +ALKE + V SLD++ F+ + +
Sbjct: 78 IVEIVRGLGAIPEIEDISITTNA--MYLAKKAEALKEAGLTRVNISLDSLHADRFQAITR 135
Query: 150 PYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFLKQINIARVDLST 209
+ K+L+GI + ++ + V+LIKG ND L K INI ++
Sbjct: 136 --GGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDFLQFTKDKDINIRFIEYMP 193
Query: 210 IDRP-SSFKAPKLSEDELLK 228
I +S+K L D + K
Sbjct: 194 IGHAGTSWKEKYLPLDTIFK 213
>ref|NP_223423.1| (NC_000921) MOLYBDOPTERIN COFACTOR BIOSYNTHETIC PROTEIN
[Helicobacter pylori J99]
sp|Q9ZL75|MOAA_HELPJ Molybdenum cofactor biosynthesis protein A
pir||A71900 molybdopterin cofactor biosynthetic protein - Helicobacter pylori
(strain J99)
gb|AAD06280.1| (AE001501) MOLYBDOPTERIN COFACTOR BIOSYNTHETIC PROTEIN
[Helicobacter pylori J99]
Length = 321
Score = 49.3 bits (116), Expect = 5e-05
Identities = 43/156 (27%), Positives = 76/156 (48%), Gaps = 9/156 (5%)
Query: 31 KQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYP 90
KQCN+ C YC EE++ ++ ++ ++ A++ I + GEP L
Sbjct: 19 KQCNFRCQYCMPTTPLDFFDDEELLPLDNVLEFLKIAIDEGVKKIRI----TGGEPLLRK 74
Query: 91 HLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKP 150
L E I + + K V ++ +NG F K+ + LK+ + + ++ LK+ +RV K
Sbjct: 75 GLDEFIAKLHAYNKEVALVLSTNG--FSLKKMAKGLKDAGLSRVNVSLDSLKS-DRVLKI 131
Query: 151 YSKD-INKILEGILRFSQIYQGQLVAEVLLIKGVND 185
KD + LEGI ++ +L +++KGVND
Sbjct: 132 SQKDALKNTLEGIEESLKVGL-KLKLNTVVMKGVND 166
>ref|NP_207561.1| (NC_000915) molybdenum cofactor biosynthesis protein A (moaA)
[Helicobacter pylori 26695]
sp|P56414|MOAA_HELPY Molybdenum cofactor biosynthesis protein A
pir||H64615 molybdenum cofactor biosynthesis protein A - Helicobacter pylori
(strain 26695)
gb|AAD07817.1| (AE000589) molybdenum cofactor biosynthesis protein A (moaA)
[Helicobacter pylori 26695]
Length = 321
Score = 48.9 bits (115), Expect = 7e-05
Identities = 43/156 (27%), Positives = 75/156 (47%), Gaps = 9/156 (5%)
Query: 31 KQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYP 90
KQCN+ C YC EE++ ++ ++ ++ A++ I + GEP L
Sbjct: 19 KQCNFRCQYCMPATPLNFFDNEELLPLDNVLEFLKIAIDEGVKKIRI----TGGEPLLRK 74
Query: 91 HLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKP 150
L E I + + K V+ ++ +NG F K+ + LK + + ++ LK+ +RV K
Sbjct: 75 GLDEFIAKLHAYNKEVELVLSTNG--FLLKKMAKDLKNAGLAQVNVSLDSLKS-DRVLKI 131
Query: 151 YSKD-INKILEGILRFSQIYQGQLVAEVLLIKGVND 185
KD + LEGI ++ +L ++IK VND
Sbjct: 132 SQKDALKNTLEGIEESLKVGL-KLKLNTVVIKSVND 166
>ref|NP_464572.1| (NC_003210) similar to molybdenum cofactor biosynthesis protein A
[Listeria monocytogenes EGD-e]
emb|CAC99125.1| (AL591977) similar to molybdenum cofactor biosynthesis protein A
[Listeria monocytogenes]
Length = 333
Score = 48.5 bits (114), Expect = 9e-05
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 11/200 (5%)
Query: 32 QCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYPH 91
+CN C+YC + E+V+ + +++ ++ + I + IT GEP L
Sbjct: 22 RCNLRCVYCMPEEGLTFLPHEKVLSKDEIVSFMELMVK---FGIKKVRITG-GEPLLRTD 77
Query: 92 LLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDI--VKFSLDAIDLKAFERVDK 149
++E+++ + + I +N Y K +ALKE + V SLD++ F+ + +
Sbjct: 78 IVEIVRGLGAIPEIEDISITTNA--MYLAKKAEALKEAGLTRVNISLDSLHADRFKAITR 135
Query: 150 PYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFLKQINIARVDLST 209
+ K+L+GI + ++ + V+LIKG ND L K INI ++
Sbjct: 136 --GGRLQKVLDGIQKAEEVGLFPIKLNVVLIKGQNDDEITDFLRFTKDKDINIRFIEYMP 193
Query: 210 IDRP-SSFKAPKLSEDELLK 228
I +S+K L D + +
Sbjct: 194 IGHAGTSWKEKYLPLDTIFE 213
>ref|NP_126242.1| (NC_000868) MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A related
[Pyrococcus abyssi]
pir||B75174 molybdenum cofactor biosynthesis protein A related PAB1998 -
Pyrococcus abyssi (strain Orsay)
emb|CAB49473.1| (AJ248284) MOLYBDENUM COFACTOR BIOSYNTHESIS PROTEIN A related
[Pyrococcus abyssi]
Length = 419
Score = 48.5 bits (114), Expect = 9e-05
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 5/156 (3%)
Query: 33 CNYNCIYCEL--GKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYP 90
CN CI+C + G +++ V+ ++ L+ ++ + A GEP LYP
Sbjct: 125 CNMRCIFCSVDEGPYSRTRKLDFVVDIDYLLKWFDWVAKEKGKGLEA-HLDAQGEPLLYP 183
Query: 91 HLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQ-ALKEFDIVKFSLDAIDLKAFERVDK 149
++EL+Q+++ + SNG L + V++ A D V S+ ++D + + +
Sbjct: 184 FIVELVQALREHPHVSVISMQSNGVLLNDKLVEELAEAGLDRVNLSIHSLDPEKAKMLMG 243
Query: 150 PYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
D+N +LE L+A V++ GVND
Sbjct: 244 IKDYDLNHVLEMAEALVNAGIDVLIAPVIMF-GVND 278
>ref|NP_615014.1| (NC_003552) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM03494.1| (AE010660) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Length = 345
Score = 47.4 bits (111), Expect = 2e-04
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 25/170 (14%)
Query: 33 CNYNCIYCELGKAKPIERMEEVIKVETLI------------------NAIQNALNNLTTP 74
CN C++C P+ E E ++ NA++ P
Sbjct: 95 CNQRCLFCWRPTEVPVPAPGEWDSPEKIVEESIACQRKLITGFGGSPNALRERWLEGNEP 154
Query: 75 IDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKF 134
+V I+ +GEPT YP+L ELI+ + +G T +++NG++ P + + +
Sbjct: 155 NNV-AISLSGEPTFYPYLPELIEEYEK--RGFTTFLVTNGTV---PSMLAKVNPSQLY-M 207
Query: 135 SLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVN 184
SLDA DLK + RV +P S + + L + + V L+KG N
Sbjct: 208 SLDAPDLKTYLRVCQPKSPALWDRINESLDIMKDKCSRTVIRTTLVKGEN 257
>ref|XP_128632.1| (XM_128632) similar to molybdenum cofactor biosynthesis protein A
[Mus musculus]
Length = 385
Score = 47.4 bits (111), Expect = 2e-04
Identities = 38/179 (21%), Positives = 86/179 (47%), Gaps = 12/179 (6%)
Query: 10 FGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALN 69
F L+ FG+ ++CN C YC + P+ +++ E ++ + +
Sbjct: 57 FSAFLTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKADLLTTEEILTLARLFVK 116
Query: 70 NLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYE---PKVQQAL 126
+D + +T GEP + P +++++ + L+G++T+ L+ + P++QQA
Sbjct: 117 E---GVDKIRLT-GGEPLIRPDVVDIVARLHG-LEGLRTIGLTTNGINLARLLPRLQQA- 170
Query: 127 KEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
+ V SLD + FE + + K +K++EGI + ++ + ++++G+N+
Sbjct: 171 -GLNAVNISLDTLVPAKFEFIVR--RKGFHKVMEGIHKAIELGYKPVKVNCVVMRGLNE 226
>ref|NP_143468.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||G71040 hypothetical protein PH1615 - Pyrococcus horikoshii
dbj|BAA30727.1| (AP000006) 420aa long hypothetical protein [Pyrococcus horikoshii]
Length = 420
Score = 47.0 bits (110), Expect = 3e-04
Identities = 37/156 (23%), Positives = 73/156 (46%), Gaps = 5/156 (3%)
Query: 33 CNYNCIYCEL--GKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYP 90
CN +CI+C + G +++ V+ ++ L+ ++ + A GEP +YP
Sbjct: 125 CNMSCIFCSVDEGPYSRTRKLDFVVDIDYLMKWFNLVAKEKGKGLEA-HLDAQGEPLMYP 183
Query: 91 HLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQ-ALKEFDIVKFSLDAIDLKAFERVDK 149
++EL+Q+++ + SNG L + V++ A D V S+ ++D K + +
Sbjct: 184 FIVELVQALRDHPHVSVISMQSNGVLLDDKLVEELAEAGLDRVNLSIHSLDPKKAKMLMG 243
Query: 150 PYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
D++ +LE L+A V++ G+ND
Sbjct: 244 IKDYDLSHVLEMAEALVNAGIDVLIAPVIIF-GIND 278
>ref|NP_633370.1| (NC_003901) Fe-S oxidoreductase [Methanosarcina mazei Goe1]
gb|AAM31042.1| (AE013367) Fe-S oxidoreductase [Methanosarcina mazei Goe1]
Length = 365
Score = 46.2 bits (108), Expect = 5e-04
Identities = 43/170 (25%), Positives = 75/170 (43%), Gaps = 25/170 (14%)
Query: 33 CNYNCIYCELGKAKPIER----------MEEVIKVETLI--------NAIQNALNNLTTP 74
CN C++C P+ +EE I + + NA++ P
Sbjct: 119 CNQRCLFCWRPTEVPVPAPGEWDFPEKIVEESIACQRKLITGFGGSPNALRERWLEGNQP 178
Query: 75 IDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKF 134
+V I+ +GEPT YP+L ELI+ + +G T +++NG++ P + + +
Sbjct: 179 NNV-AISLSGEPTFYPYLPELIEEYEK--RGFTTFLVTNGTV---PSMLAKVNPSQLY-M 231
Query: 135 SLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVN 184
SLDA DL+ + R+ +P S + + L + + V L+KG N
Sbjct: 232 SLDAPDLETYLRICQPKSPALWDRINESLDIMKDKSSRTVIRTTLVKGEN 281
>ref|NP_391551.1| (NC_000964) alternate gene name: narAB [Bacillus subtilis]
sp|P39757|MOAA_BACSU Molybdenum cofactor biosynthesis protein A (narA protein)
pir||D69664 molybdenum cofactor biosynthesis protein narA - Bacillus subtilis
emb|CAA84540.1| (Z35277) unknown [Bacillus subtilis]
emb|CAB03683.1| (Z81356) MoaA-like protein [Bacillus subtilis]
emb|CAB15687.1| (Z99122) alternate gene name: narAB [Bacillus subtilis]
Length = 341
Score = 46.2 bits (108), Expect = 5e-04
Identities = 45/162 (27%), Positives = 79/162 (47%), Gaps = 17/162 (10%)
Query: 32 QCNYNCIYCE----LGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTI-TANGEP 86
+CN+ C YC G P + EE++ E L + T V I GEP
Sbjct: 26 RCNFRCTYCMPAELFGPDYPFLKKEELLSFEEL----ERLATLFVTRFGVEKIRLTGGEP 81
Query: 87 TLYPHLLELIQSIKPFLKGVKTLIL-SNGSLFYEPKVQQALKEFDI--VKFSLDAIDLKA 143
+ + ELI+ + + G++ + + +NGSL P + LKE + V SLD+++ +
Sbjct: 82 LMRKDMPELIKKLAR-IPGIRDIAMTTNGSLL--PVYAKRLKEAGLKRVTISLDSLEDER 138
Query: 144 FERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
F++++ ++K+LEGI Q G + +++ KGVN+
Sbjct: 139 FKKIN-GRGVSVSKVLEGIEAAKQAGLGVKI-NMVVQKGVNE 178
>ref|XP_166358.1| (XM_166358) molybdenum cofactor synthesis 1 [Homo sapiens]
emb|CAA11897.1| (AJ224328) MOCS1A protein [Homo sapiens]
emb|CAC44527.1| (AJ293577) MOCS1A enzyme [Homo sapiens]
Length = 385
Score = 45.8 bits (107), Expect = 6e-04
Identities = 38/179 (21%), Positives = 86/179 (47%), Gaps = 12/179 (6%)
Query: 10 FGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALN 69
F L+ FG+ ++CN C YC + P+ ++ E ++ + +
Sbjct: 57 FSAFLTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVK 116
Query: 70 NLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTL-ILSNGSLFYE--PKVQQAL 126
ID + +T GEP + P +++++ ++ L+G++T+ + +NG P++Q+A
Sbjct: 117 E---GIDKIRLT-GGEPLIRPDVVDIVAQLQR-LEGLRTIGVTTNGINLARLLPQLQKA- 170
Query: 127 KEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
+ SLD + FE + + K +K++EGI + ++ + ++++G+N+
Sbjct: 171 -GLSAINISLDTLVPAKFEFIVR--RKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNE 226
>gb|AAB87523.1| (AF034374) molybdenum cofactor biosynthesis protein A [Homo
sapiens]
Length = 385
Score = 45.8 bits (107), Expect = 6e-04
Identities = 38/179 (21%), Positives = 86/179 (47%), Gaps = 12/179 (6%)
Query: 10 FGPVLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALN 69
F L+ FG+ ++CN C YC + P+ ++ E ++ + +
Sbjct: 57 FSAFLTDSFGRQHSYLRISLTEKCNLRCQYCMPEEGVPLTPKANLLTTEEILTLARLFVK 116
Query: 70 NLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTL-ILSNGSLFYE--PKVQQAL 126
ID + +T GEP + P +++++ ++ L+G++T+ + +NG P++Q+A
Sbjct: 117 E---GIDKIRLT-GGEPLIRPDVVDIVAQLQR-LEGLRTIGVTTNGINLARLLPQLQKA- 170
Query: 127 KEFDIVKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
+ SLD + FE + + K +K++EGI + ++ + ++++G+N+
Sbjct: 171 -GLSAINISLDTLVPAKFEFIVR--RKGFHKVMEGIHKAIELGYNPVKVNCVVMRGLNE 226
>ref|NP_247067.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q57567|Y103_METJA Hypothetical protein MJ0103
pir||G64312 hypothetical protein MJ0103 - Methanococcus jannaschii
gb|AAB98083.1| (U67467) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 433
Score = 45.4 bits (106), Expect = 8e-04
Identities = 37/158 (23%), Positives = 72/158 (45%), Gaps = 6/158 (3%)
Query: 33 CNYNCIYCEL--GKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYP 90
CN NCI+C + G+ + + + +E LI + ++ + GEP+LY
Sbjct: 118 CNLNCIFCSVDEGEFSKTRKNDYYVDLEYLIENYKKIVDFKENKFIEAHLDGQGEPSLYY 177
Query: 91 HLLELIQSIKPF-LKGVKTLILSNGSLFYEPKVQQALKEFDI--VKFSLDAIDLKAFERV 147
L++L+Q + KG + + K+ L+E + + S++A+D K + +
Sbjct: 178 PLVDLVQELAEINKKGNGIVSMQTNGTVLNYKLIDELEEAGLHRINLSINALDEKMAKML 237
Query: 148 DKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
+I KIL+ I + + + L+ LL+ +ND
Sbjct: 238 SGRRDYNIKKILD-IAEYIKNSKIHLLIAPLLLPNIND 274
>emb|CAC40787.1| (AJ291988) MoaA protein [Eubacterium acidaminophilum]
Length = 325
Score = 45.1 bits (105), Expect = 0.001
Identities = 40/155 (25%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 32 QCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYPH 91
+CN C+YC + P +++ +E L A+ + ID + IT GEP +
Sbjct: 25 RCNLRCMYCMPQEGIPKRAHHDIMTLEELQEV---AVALVELGIDKIRIT-GGEPLVRKG 80
Query: 92 LLELIQSIKPFLKGVKTLIL-SNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKP 150
++ L++ + +G+ + L +NG L E + V SLD ++ + FE + +
Sbjct: 81 IVGLVRELSK-CEGLNEITLTTNGLLLSEYARELKAAGLKRVNISLDTLNPQKFEYITRG 139
Query: 151 YSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
S + K+LEGI + + +LI G ND
Sbjct: 140 GS--LEKVLEGIKEAQSVGLTPIKLNTVLIGGFND 172
>ref|NP_662220.1| (NC_002932) molybdenum cofactor biosynthesis protein A [Chlorobium
tepidum TLS]
gb|AAM72562.1| (AE012892) molybdenum cofactor biosynthesis protein A [Chlorobium
tepidum TLS]
Length = 330
Score = 45.1 bits (105), Expect = 0.001
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 15/176 (8%)
Query: 13 VLSRRFGKSLGVDLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLT 72
VL+ RFG+++ CN C YC A + +V++ LI L
Sbjct: 10 VLTDRFGRTVDYVRIAVTSACNLRCTYCLKEDAPTQTQQLDVVETSKLI--------ALL 61
Query: 73 TPIDVLTIT-ANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKE-FD 130
+ V I GEP L+P + EL++ K G+ T+ ++ + + ++ ++ D
Sbjct: 62 AGMGVRKIRFTGGEPLLHPSIPELVRIAKA-TPGIDTVCITTNGVLLDRQLDALVEAGLD 120
Query: 131 IVKFSLDAIDLKAFERVD-KPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVND 185
V SLD +D + F + + + ++K L+ +L + + L+++G+N+
Sbjct: 121 GVNLSLDTLDREKFTSITRRDRFEQVSKALDRLLATPSL---TVKLNTLMLRGINN 173
>ref|NP_578031.1| (NC_003413) co-factor modifying protein [Pyrococcus furiosus DSM
3638]
gb|AAL80426.1| (AE010154) co-factor modifying protein [Pyrococcus furiosus DSM
3638]
Length = 284
Score = 44.7 bits (104), Expect = 0.001
Identities = 45/182 (24%), Positives = 84/182 (45%), Gaps = 28/182 (15%)
Query: 33 CNYNCIYCELGKA------------KPIERMEEVIKVETL-INAIQNALNNLTTPIDVLT 79
CN+ C YC + + ++ + + KV L + ++ L I L
Sbjct: 67 CNWRCKYCVWREVTRWSLCLPEKTRQQLDYLWKERKVRYLTVEEVERILEKERVKIAFL- 125
Query: 80 ITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAI 139
GEPTL P L L++++ +G+K +++NG + V A + FS+ A+
Sbjct: 126 --GGGEPTLDPELKPLMKALAK--RGIKVWLVTNGEGLDDEIVDIAYG----ITFSIKAL 177
Query: 140 DLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFLKQ 199
D + +R+ +K+LE R+++ G++VAE + + G+ + +K IA F+
Sbjct: 178 DEELHKRIT---GVSNSKVLENFRRYAK--SGKIVAETVYVPGLVECEEIMK-IAEFIAS 231
Query: 200 IN 201
IN
Sbjct: 232 IN 233
>ref|NP_143549.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||D71178 hypothetical protein PH1705 - Pyrococcus horikoshii
Length = 342
Score = 44.7 bits (104), Expect = 0.001
Identities = 46/186 (24%), Positives = 83/186 (43%), Gaps = 32/186 (17%)
Query: 24 VDLSPSKKQCNYNCIYCE------LGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDV 77
+ ++P C +NCI+C LG P + VE I A + L V
Sbjct: 72 LQMTPVLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKV 131
Query: 78 -------------LTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQ 124
I+ +GEP LYP++ +L++ +G T I++NG++ ++++
Sbjct: 132 DKKKFEEAWNPTHAAISLSGEPMLYPYMGDLVEEFHK--RGFTTFIVTNGTI--PERLEE 187
Query: 125 ALKEFDI---VKFSLDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQG---QLVAEVL 178
+KE + + S+ A D++ + V+ P D E ILRF ++ + + V +
Sbjct: 188 MIKEDKLPTQLYVSITAPDIETYNSVNIPMIPD---GWERILRFLELMRDLPTRTVVRLT 244
Query: 179 LIKGVN 184
L+KG N
Sbjct: 245 LVKGEN 250
>ref|NP_577916.1| (NC_003413) putative cofactor synthesis protein [Pyrococcus
furiosus DSM 3638]
gb|AAL80311.1| (AE010145) putative cofactor synthesis protein [Pyrococcus furiosus
DSM 3638]
Length = 302
Score = 44.7 bits (104), Expect = 0.001
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 39/263 (14%)
Query: 25 DLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANG 84
+L+P+ CN++CI+C A + R A P +T++ G
Sbjct: 61 ELTPA---CNHDCIFCYSNVAVKLGR------------APSPGYYGWENP-KAITVSQYG 104
Query: 85 EPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAF 144
EP L P ++E+ + ++ + + +NGSL ++ +FD+V SL+A D +
Sbjct: 105 EPLLSPRIIEVNRILRERFPEARLDLQTNGSLLTRELWEKL--DFDLVMISLNAADKEKH 162
Query: 145 ERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFLKQINIAR 204
+R+ + +++ + + + V + + G+ND ++ IA + I
Sbjct: 163 KRIAN--ADTFEQVVNALKIVGEDDSVRSVVRTIFMPGIND--EDIPKIAELAASLGIDE 218
Query: 205 VDLSTIDRPSSFKAPKLSEDELLKCSLFFE-GLCVSLPKRSITQAKKLISCGID------ 257
+ L + +L+ + L K L FE + ++ +AKK I I
Sbjct: 219 MHLQPL------TIHELNVERLKKAGLDFERAESIRELLKAAMEAKKYIDVRISGCILVQ 272
Query: 258 ----ELLALISRRPLSAEEAPLI 276
+ + L S R ++ E APL+
Sbjct: 273 LKQMDPITLYSVRRVAREVAPLV 295
>ref|NP_378170.1| (NC_003106) 323aa long hypothetical molybdenum cofactor
biosynthesis protein A [Sulfolobus tokodaii]
dbj|BAB67279.1| (AP000989) 323aa long hypothetical molybdenum cofactor biosynthesis
protein A [Sulfolobus tokodaii]
Length = 323
Score = 44.3 bits (103), Expect = 0.002
Identities = 40/158 (25%), Positives = 79/158 (49%), Gaps = 9/158 (5%)
Query: 33 CNYNCIYCELGKAKPIERM---EEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLY 89
C +CI+C + A P R E ++ + LIN + ++ + +L I GEP L+
Sbjct: 36 CPMSCIFCSVD-AGPNSRSRVTEYIVDADHLINWVNYVVDRKIHQVSIL-IDGVGEPILH 93
Query: 90 PHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQ-QALKEFDIVKFSLDAIDLKAFERVD 148
P ++++++ IK K + I ++G E ++ A D + SLD++D + +
Sbjct: 94 PDIVKIVKGIKENRKVFEVAIETHGLPLNERLIKGLANAGLDRINLSLDSLDENKAKYLS 153
Query: 149 KPYSKDINKILEGILRFSQIYQG-QLVAEVLLIKGVND 185
+++KIL+ I + +G +++ + IKG+ND
Sbjct: 154 GHKGYNVSKILKMI--DLALNEGLKIMLTPVWIKGMND 189
>ref|XP_137874.1| (XM_137874) similar to KIAA0336 gene product [Mus musculus]
Length = 1599
Score = 44.3 bits (103), Expect = 0.002
Identities = 48/182 (26%), Positives = 83/182 (45%), Gaps = 20/182 (10%)
Query: 49 ERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSI--KPFLKGV 106
+R++E+I+V+ L AI+N N +DV L+ L L S+ K FL V
Sbjct: 749 QRIKELIQVDVLPAAIENLQNFCGDQMDV--------AQLWKTLSSLDSSLKEKEFLDAV 800
Query: 107 KTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDK---PYSKDINKILEGIL 163
K + + ++ +ALK D KFS +A E +D Y D + LEG+
Sbjct: 801 KLATVDDDNMLSVKDCMEALK--DTSKFSNFTALKEAIEMLDSVKGSYWSDKERFLEGL- 857
Query: 164 RFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFLKQINIARVDLSTIDRPSSFKAPKLSE 223
+ +G L EVL V + + +K +A L Q+ ++ + ++R + +SE
Sbjct: 858 ---EDLEG-LKKEVLSSNLVLPTVSEIKEVAGILSQVEDGKITIPDLERALKYLNLNISE 913
Query: 224 DE 225
++
Sbjct: 914 ED 915
>ref|NP_143792.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||F71212 hypothetical protein PH1966 - Pyrococcus horikoshii
Length = 303
Score = 43.9 bits (102), Expect = 0.002
Identities = 56/263 (21%), Positives = 110/263 (41%), Gaps = 39/263 (14%)
Query: 25 DLSPSKKQCNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANG 84
+L+P+ CN++CI+C A + + A + P V+TI+ G
Sbjct: 62 ELTPA---CNHDCIFCYSNVAVKLGK------------APKPGYYGWDNP-KVITISQYG 105
Query: 85 EPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAF 144
EP L P ++E+ + ++ + + +NGSL ++ +FD+V SL+A D +
Sbjct: 106 EPLLSPRIVEVNKMLRKRFPEARLDLQTNGSLLTRELWEKL--DFDLVMISLNAADREKH 163
Query: 145 ERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFLKQINIAR 204
R+ + +++ + + + V + + G+ND ++ IA + I
Sbjct: 164 RRIAN--ADTFEQVVNALKIVGEDKSVRSVVRTVFMPGIND--EDIPKIAELAASLGIDE 219
Query: 205 VDLSTIDRPSSFKAPKLSEDELLKCSLFFE-GLCVSLPKRSITQAKKLISCGID------ 257
+ L + +L+ + L K L FE + ++ +AKK I I
Sbjct: 220 MHLQPL------TIHELNVERLKKAGLDFERAESIRELLKAAMEAKKYIDVRISGCILVQ 273
Query: 258 ----ELLALISRRPLSAEEAPLI 276
+ + L S R ++ E PL+
Sbjct: 274 LKQMDPITLYSVRRVAREVVPLV 296
>ref|NP_071086.1| (NC_000917) conserved hypothetical protein [Archaeoglobus fulgidus]
pir||E69532 conserved hypothetical protein AF2261 - Archaeoglobus fulgidus
gb|AAB88988.1| (AE000948) conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 298
Score = 43.9 bits (102), Expect = 0.002
Identities = 47/169 (27%), Positives = 76/169 (44%), Gaps = 25/169 (14%)
Query: 33 CNYNCIYC----ELGKA-----KPIERMEEVIKVETLI--------NAIQNALNNLTTPI 75
CN NC+YC EL K +P +EE I+ + + + L P
Sbjct: 60 CNQNCLYCWRPLELLKGFRGWDEPEFIVEESIRAQHRLLSGFHGTEGVNRKKLEEAYEPN 119
Query: 76 DVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFS 135
V I+ GEPTLYP L ELI+ K +G T +++NG+ P + + +K + S
Sbjct: 120 QV-AISLIGEPTLYPMLPELIEEYKK--RGFTTFLVTNGT---NPDMLEKVKPTQLY-LS 172
Query: 136 LDAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVN 184
L A D + +++P + ++L L + + V + LI+G N
Sbjct: 173 LTAFDEDSHLVLNRPGKSNWERVLRS-LEVMRDSGSRTVIRLTLIRGYN 220
>ref|NP_247229.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q57705|Y257_METJA Hypothetical protein MJ0257
pir||B64332 hypothetical protein MJ0257 - Methanococcus jannaschii
gb|AAB98244.1| (U67481) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 311
Score = 43.9 bits (102), Expect = 0.002
Identities = 57/237 (24%), Positives = 101/237 (42%), Gaps = 46/237 (19%)
Query: 24 VDLSPSKKQCNYNCIYC----------ELGKAKPIERMEEVIKVETLINAIQNALNNLTT 73
+ +PS C NCI+C ++ + K + E + E ++ + +
Sbjct: 53 IQCTPSVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAG 112
Query: 74 PIDVL--------------TITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYE 119
+D + I+ +GEPTLYP+L ELI+ G T ++SNG L
Sbjct: 113 VLDRVGEKKFKEALEPKHVAISLSGEPTLYPYLDELIKIFHK--NGFTTFVVSNGIL--- 167
Query: 120 PKVQQALKEFDIVKFSLDAIDLKAFERV---DKPYSKDINKILEGILRFSQIYQGQLVAE 176
V + ++ + SLDA DL ++ R+ K Y + I L+ IL+ + +
Sbjct: 168 TDVIEKIEPTQLY-ISLDAYDLDSYRRICGGKKEYWESILNTLD-ILKEKK----RTCIR 221
Query: 177 VLLIKGVNDSANNLKLIAAFLKQINIARVDLST-----IDRPSSFKAPKLSEDELLK 228
LI+G ND LK + + ++ ++ ++L + + K L DE+LK
Sbjct: 222 TTLIRGYNDDI--LKFVELY-ERADVHFIELKSYMHVGYSQKRLKKEDMLQHDEILK 275
>ref|NP_579447.1| (NC_003413) hypothetical protein [Pyrococcus furiosus DSM 3638]
gb|AAL81842.1| (AE010269) hypothetical protein [Pyrococcus furiosus DSM 3638]
Length = 338
Score = 43.9 bits (102), Expect = 0.002
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 28/184 (15%)
Query: 24 VDLSPSKKQCNYNCIYCE------LGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDV 77
+ ++P C +NCI+C LG P + VE I A + L V
Sbjct: 68 LQMTPVLAWCTHNCIFCWRPMETFLGTEVPEPWDDPAFIVEESIKAQRKLLVGYKGNPKV 127
Query: 78 -------------LTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQ 124
I+ +GEP LYP++ +L++ +G T I++NG++ +++
Sbjct: 128 DKKKFEEAWEPKHAAISLSGEPMLYPYMGDLVEEFHK--RGFTTFIVTNGTV--PESLRE 183
Query: 125 ALKEFDI---VKFSLDAIDLKAFERVDKPYSKD-INKILEGILRFSQIYQGQLVAEVLLI 180
+K+ + + SL A D++++ +V+ P D KILE L + + V + L+
Sbjct: 184 MIKDDKLPTQLYVSLTAPDIESYNKVNIPMIPDGWEKILE-FLELMRDIPTRTVVRLTLV 242
Query: 181 KGVN 184
KG N
Sbjct: 243 KGEN 246
>ref|NP_248642.1| (NC_000909) coenzyme PQQ synthesis protein (pqqE) [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
pir||F64503 hypothetical protein MJ1632 - Methanococcus jannaschii
gb|AAB99653.1| (U67603) coenzyme PQQ synthesis protein (pqqE) [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
Length = 255
Score = 43.5 bits (101), Expect = 0.003
Identities = 53/224 (23%), Positives = 96/224 (42%), Gaps = 18/224 (8%)
Query: 33 CNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYPHL 92
CN+ C YC KP+ + V+ ++N I N +D + I A GEPTL L
Sbjct: 45 CNFKCKYCFF---KPLSCKK--YSVDEILNKILEVNENYK--LDKILI-AGGEPTLQNDL 96
Query: 93 LELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKFSLDAIDLKAFERVDKPYS 152
EL + +K +G ++ +NG Y K E D + L A D + +
Sbjct: 97 SELTKLLKD--EGFYLMLSTNG---YYLKDMLDKLEVDEIHIDLKAYDENKHIYLTSCSN 151
Query: 153 KDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFLKQINIARVDLSTIDR 212
K + + I ++ + ++ + +LI + D + ++ IA FL ++ +
Sbjct: 152 KKVLDCISYIGKYRDEFNFKVEIDTVLIPNIVD-LDEIEKIAKFLSNWDLPYRITGYVKY 210
Query: 213 PSSFKAPKLSEDELLKCS----LFFEGLCVSLPKRSITQAKKLI 252
++ A K ED++LK + + SL + ++KK+I
Sbjct: 211 NNNLNAEKPDEDKILKAKEIALKYLSNVSCSLDFKRHKKSKKVI 254
>ref|NP_111571.1| (NC_002689) Molybdenum cofactor biosynthesis enzyme [Thermoplasma
volcanium]
dbj|BAB60222.1| (AP000995) molybdenum cofactor biosynthesis protein moaA
[Thermoplasma volcanium]
Length = 326
Score = 43.5 bits (101), Expect = 0.003
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 30/153 (19%)
Query: 13 VLSRRFGK---SLGVDLSPSKKQCNYNCIYCEL------GKAKPIERMEEVIKVETLINA 63
VL+ +G+ SL + L+ + CN+NC +C + G+A E +E V+K+ A
Sbjct: 2 VLTDLYGRPVLSLRIQLNTT---CNFNCFFCHMEGTEISGEALKPEEIERVVKI-----A 53
Query: 64 IQNALNNLTTPIDVLTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQ 123
+ +N + GEPTL L+++++ I+ ++ G + +NG + P +
Sbjct: 54 HKFGVNKIKL--------TGGEPTLRRDLIDIVKRIRKYITG-NISMTTNGVML--PILA 102
Query: 124 QALKE--FDIVKFSLDAIDLKAFERVDKPYSKD 154
LK+ D V S+ A D F+ + S+D
Sbjct: 103 YELKKAGLDRVNISMHAFDEDTFQAITGVNSRD 135
>ref|NP_147692.1| (NC_000854) hypothetical protein [Aeropyrum pernix]
pir||D72705 hypothetical protein APE1059 - Aeropyrum pernix (strain K1)
dbj|BAA80044.1| (AP000060) 346aa long hypothetical protein [Aeropyrum pernix]
Length = 346
Score = 43.1 bits (100), Expect = 0.004
Identities = 33/128 (25%), Positives = 61/128 (46%), Gaps = 9/128 (7%)
Query: 78 LTITANGEPTLYPHLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDIVKF-SL 136
+T++ GEPTLYP L +L++ + +G+ + +++ G P + L+E + SL
Sbjct: 133 VTLSLTGEPTLYPMLSDLLKEV--HRRGMTSFLVTRG---VRPDILADLEEEPSQLYVSL 187
Query: 137 DAIDLKAFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAF 196
+A D K++ +P ++ L + + L+ G ND+ LK F
Sbjct: 188 EAWDKKSYNYFTRPLVPRAWELTMETLEMMPSFTSPTAIRITLVAGFNDTDEALK---GF 244
Query: 197 LKQINIAR 204
K IN+A+
Sbjct: 245 AKLINLAQ 252
>ref|NP_469827.1| (NC_003212) similar to conserved hypothetical proteins, highly
similar to B. subtilis YloN protein [Listeria innocua]
emb|CAC95716.1| (AL596165) similar to conserved hypothetical proteins, highly
similar to B. subtilis YloN protein [Listeria innocua]
Length = 367
Score = 42.0 bits (97), Expect = 0.009
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 33 CNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALN--NLTTPIDVLTITANGEP-TLY 89
CN C +C G K + VE ++N +Q+ L+ NL + + + GEP Y
Sbjct: 112 CNIGCTFCASGLLKKSRDLTAGEIVEQIMN-VQHYLDGRNLEERVSHVVVMGIGEPFDNY 170
Query: 90 PHLLELIQSI---KPFLKGVKTLILSNGSLFYEPKVQQ-ALKEFDI-VKFSLDAIDLK-- 142
++++ ++ I K G + + +S L P++ A ++F + + SL A + +
Sbjct: 171 DNVMDFLRVINHDKGLAIGARHITVSTSGL--APRIIDFANEDFQVNLAISLHAPNNELR 228
Query: 143 -AFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFL 197
+ R++K YS I K++E I + ++ E +++KGVND +AA L
Sbjct: 229 TSIMRINKTYS--IEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALL 282
>ref|NP_487905.1| (NC_003272) molybdenum cofactor biosynthesis protein A [Nostoc sp.
PCC 7120]
dbj|BAB75564.1| (AP003594) molybdenum cofactor biosynthesis protein A [Nostoc sp.
PCC 7120]
Length = 328
Score = 42.0 bits (97), Expect = 0.009
Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 9/158 (5%)
Query: 32 QCNYNCIYC-ELGKAKPIERMEEVIKVETLINAIQNALNNLTTPIDVLTITANGEPTLYP 90
+CN+ C YC G ++++ E L+ +Q + LT GEP L P
Sbjct: 14 RCNFRCQYCMPEGSELNYILKQQLLTDEELLTLVQEVFIPVGFRQFRLT---GGEPLLRP 70
Query: 91 HLLELIQSIKPFLKGVKTLILSNGSLFYEPKVQQALKEFDI--VKFSLDAIDLKAFERVD 148
H+++L+ +I + + +NG F + Q L + + + SLD++D F+++
Sbjct: 71 HVVDLVGAIASLPQTQDLSMTTNG--FLLAPIAQNLYDAGLRRINISLDSLDPHIFDQII 128
Query: 149 KPYSKD-INKILEGILRFSQIYQGQLVAEVLLIKGVND 185
+ + ++ +GI ++ L V++I GVND
Sbjct: 129 GSHGRPRWQQVWDGIQAAHRVGFDPLKLNVVVIPGVND 166
>ref|NP_464010.1| (NC_003210) similar to conserved hypothetical proteins, highly
similar to B. subtilis YloN protein [Listeria
monocytogenes EGD-e]
emb|CAC98561.1| (AL591975) similar to conserved hypothetical proteins, highly
similar to B. subtilis YloN protein [Listeria
monocytogenes]
Length = 367
Score = 42.0 bits (97), Expect = 0.009
Identities = 45/176 (25%), Positives = 84/176 (47%), Gaps = 16/176 (9%)
Query: 33 CNYNCIYCELGKAKPIERMEEVIKVETLINAIQNALN--NLTTPIDVLTITANGEP-TLY 89
CN C +C G K + VE ++N +Q+ L+ NL + + + GEP Y
Sbjct: 112 CNIGCTFCASGLLKKSRDLTAGEIVEQIMN-VQHYLDGRNLEERVSHVVVMGIGEPFDNY 170
Query: 90 PHLLELIQSI---KPFLKGVKTLILSNGSLFYEPKVQQ-ALKEFDI-VKFSLDAIDLK-- 142
++++ ++ I K G + + +S L P++ A ++F + + SL A + +
Sbjct: 171 DNVMDFLRVINHDKGLAIGARHITVSTSGL--APRIIDFANEDFQVNLAISLHAPNNELR 228
Query: 143 -AFERVDKPYSKDINKILEGILRFSQIYQGQLVAEVLLIKGVNDSANNLKLIAAFL 197
+ R++K YS I K++E I + ++ E +++KGVND +AA L
Sbjct: 229 TSIMRINKTYS--IEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALL 282
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.320 0.139 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 180,747,772
Number of Sequences: 1026957
Number of extensions: 7161794
Number of successful extensions: 19753
Number of sequences better than 1.0e-02: 53
Number of HSP's better than 0.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 19662
Number of HSP's gapped (non-prelim): 57
length of query: 308
length of database: 324,149,939
effective HSP length: 121
effective length of query: 187
effective length of database: 199,888,142
effective search space: 37379082554
effective search space used: 37379082554
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 97 (42.0 bits)