BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645796|ref|NP_207973.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(253 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207973.1| (NC_000915) conserved hypothetical protein... 511 e-144
ref|NP_223825.1| (NC_000921) putative [Helicobacter pylori ... 501 e-141
ref|NP_281329.1| (NC_002163) hypothetical protein Cj0118 [C... 235 4e-61
ref|NP_405872.1| (NC_003143) conserved hypothetical protein... 150 1e-35
ref|NP_460613.1| (NC_003197) putative ATPase [Salmonella ty... 146 2e-34
gb|AAL27304.1|AF370716_7 (AF370716) YdaO [Salmonella enteri... 146 2e-34
ref|NP_455849.1| (NC_003198) conserved hypothetical protein... 146 2e-34
ref|NP_231075.1| (NC_002505) conserved hypothetical protein... 145 3e-34
ref|NP_439523.1| (NC_000907) conserved hypothetical protein... 145 4e-34
ref|NP_415860.1| (NC_000913) orf, hypothetical protein [Esc... 144 7e-34
ref|NP_287839.1| (NC_002655) orf, hypothetical protein [Esc... 144 7e-34
ref|NP_284189.1| (NC_003116) hypothetical protein NMA1465 [... 144 7e-34
ref|NP_245543.1| (NC_002663) unknown [Pasteurella multocida... 143 2e-33
ref|NP_294203.1| (NC_001263) conserved hypothetical protein... 142 3e-33
ref|NP_274057.1| (NC_003112) conserved hypothetical protein... 140 1e-32
ref|NP_249883.1| (NC_002516) conserved hypothetical protein... 140 1e-32
ref|NP_518296.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 140 2e-32
ref|NP_297859.1| (NC_002488) conserved hypothetical protein... 134 1e-30
ref|NP_639438.1| (NC_003902) conserved hypothetical protein... 131 8e-30
ref|NP_623133.1| (NC_003869) predicted ATPase of the PP-loo... 130 2e-29
ref|NP_561906.1| (NC_003366) conserved hypothetical protein... 129 2e-29
ref|NP_540049.1| (NC_003317) ATPases of the PP superfamily ... 126 2e-28
ref|NP_101931.1| (NC_002678) hypothetical protein [Mesorhiz... 123 2e-27
ref|NP_644523.1| (NC_003919) conserved hypothetical protein... 122 5e-27
ref|NP_497589.1| (NM_065188) Y71H2B.5.p [Caenorhabditis ele... 118 7e-26
ref|NP_603765.1| (NC_003454) ATPases of the PP superfamily ... 117 9e-26
ref|NP_385891.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 117 1e-25
ref|NP_354840.1| (NC_003062) AGR_C_3410p [Agrobacterium tum... 111 9e-24
ref|NP_532538.1| (NC_003304) conserved hypothetical protein... 111 9e-24
ref|NP_276852.1| (NC_000916) conserved protein [Methanother... 88 1e-16
ref|NP_579487.1| (NC_003413) n-type ATP pyrophosphatase sup... 83 2e-15
ref|NP_143524.1| (NC_000961) hypothetical protein [Pyrococc... 80 2e-14
ref|NP_070424.1| (NC_000917) conserved hypothetical protein... 79 5e-14
ref|NP_126184.1| (NC_000868) hypothetical protein [Pyrococc... 78 8e-14
ref|NP_562410.1| (NC_003366) conserved hypothetical protein... 77 1e-13
ref|NP_296866.1| (NC_002620) conserved hypothetical protein... 76 3e-13
ref|NP_602768.1| (NC_003454) Cell cycle protein MesJ [Fusob... 74 1e-12
ref|NP_219721.1| (NC_000117) PP-Loop Superfamily ATPase [Ch... 70 2e-11
ref|NP_224466.1| (NC_000922) PP-Loop Superfamily ATPase [Ch... 70 2e-11
ref|NP_248152.1| (NC_000909) conserved hypothetical protein... 69 5e-11
ref|NP_376519.1| (NC_003106) 318aa long hypothetical veg136... 64 2e-09
ref|NP_623930.1| (NC_003869) predicted ATPase of the PP-loo... 63 3e-09
ref|NP_560888.1| (NC_003364) conserved hypothetical protein... 61 1e-08
ref|NP_634820.1| (NC_003901) conserved protein [Methanosarc... 60 2e-08
ref|NP_614386.1| (NC_003551) Predicted ATPase of the PP-loo... 60 3e-08
ref|NP_127340.1| (NC_000868) hypothetical protein [Pyrococc... 60 3e-08
ref|NP_147309.1| (NC_000854) hypothetical protein [Aeropyru... 59 4e-08
ref|NP_276314.1| (NC_000916) conserved protein [Methanother... 59 4e-08
ref|NP_248483.1| (NC_000909) conserved hypothetical protein... 59 4e-08
ref|NP_342110.1| (NC_002754) Conserved hypothetical protein... 59 5e-08
ref|NP_578002.1| (NC_003413) n-type ATP pyrophosphatase sup... 59 5e-08
ref|NP_616897.1| (NC_003552) conserved hypothetical protein... 58 9e-08
ref|NP_038397.1| (NC_002186) hypothetical chloroplast RF62 ... 57 1e-07
ref|NP_284094.1| (NC_003116) hypothetical protein NMA1350 [... 57 1e-07
ref|NP_559910.1| (NC_003364) conserved hypothetical protein... 56 3e-07
ref|NP_148374.1| (NC_000854) hypothetical protein [Aeropyru... 56 4e-07
ref|NP_621776.1| (NC_003869) predicted ATPase of the PP-loo... 55 7e-07
ref|NP_597632.1| (NC_003230) similarity to HYPOTHETICAL PRO... 55 7e-07
ref|NP_614337.1| (NC_003551) Predicted ATPase of the PP-loo... 54 1e-06
ref|NP_247461.1| (NC_000909) conserved hypothetical protein... 54 1e-06
ref|NP_377416.1| (NC_003106) 322aa long hypothetical veg136... 54 1e-06
ref|NP_499865.1| (NM_067464) F29C4.6.p [Caenorhabditis eleg... 54 2e-06
ref|NP_613338.1| (NC_003551) Predicted ATPase of the PP-loo... 54 2e-06
dbj|BAB59586.1| (AP000992) hypothetical protein [Thermoplas... 53 3e-06
ref|NP_110964.1| (NC_002689) Predicted ATPase (PP-loop supe... 53 3e-06
pir||S66097 cell-cycle protein homolog yacA - Bacillus subt... 53 4e-06
ref|NP_213916.1| (NC_000918) hypothetical protein [Aquifex ... 52 5e-06
ref|NP_142287.1| (NC_000961) hypothetical protein [Pyrococc... 52 5e-06
ref|NP_563388.1| (NC_003366) probable cell-cycle protein [C... 52 5e-06
ref|NP_279323.1| (NC_002607) Vng0190c [Halobacterium sp. NR... 52 8e-06
ref|NP_387948.1| (NC_000964) similar to cell-cycle protein ... 51 1e-05
ref|NP_349800.1| (NC_003030) Cell cycle protein MesJ orthol... 51 1e-05
ref|NP_469596.1| (NC_003212) fusion protein, N-terminal par... 51 1e-05
emb|CAB51028.1| (AJ243808) YaeN protein [Bradyrhizobium jap... 51 1e-05
ref|NP_181956.1| (NM_129991) hypothetical protein [Arabidop... 51 1e-05
ref|NP_654012.1| (NC_003995) UPF0021, Uncharacterized prote... 51 1e-05
ref|NP_623996.1| (NC_003869) predicted ATPase of the PP-loo... 50 2e-05
ref|NP_613431.1| (NC_003551) Predicted ATPase of the PP-loo... 50 2e-05
ref|NP_177744.1| (NM_106266) hypothetical protein [Arabidop... 50 2e-05
ref|NP_637946.1| (NC_003902) cell cycle protein [Xanthomona... 50 2e-05
sp|P53088|YGW1_YEAST Hypothetical 35.5 kDa protein in VAM7-... 49 4e-05
gb|EAA09552.1| (AAAB01008900) ebiP3783 [Anopheles gambiae s... 49 5e-05
ref|NP_596064.1| (NC_003423) hypothetical protein [Schizosa... 49 5e-05
sp|Q94480|V136_DICDI VEG136 PROTEIN >gi|1513300|gb|AAB06790... 49 5e-05
gb|EAA09344.1| (AAAB01008900) agCP15127 [Anopheles gambiae ... 49 5e-05
ref|NP_438566.1| (NC_000907) cell cycle protein (mesJ) [Hae... 49 5e-05
ref|NP_070150.1| (NC_000917) conserved hypothetical protein... 49 7e-05
ref|XP_031105.1| (XM_031105) hypothetical protein XP_031105... 48 9e-05
pir||T31465 cell cycle protein homolog mesJ - Heliobacillus... 48 1e-04
ref|NP_394578.1| (NC_002578) conserved hypothetical protein... 48 1e-04
ref|NP_662497.1| (NC_002932) MesJ protein [Chlorobium tepid... 48 1e-04
gb|AAF58991.1| (AE003834) CG8078-PA [Drosophila melanogaste... 48 1e-04
gb|AAG12421.1| (AY005137) MesJ [Chlorobium tepidum] 48 1e-04
ref|NP_660275.1| (NM_145232) LOC90353 [Homo sapiens] >gi|14... 47 2e-04
dbj|BAB63758.1| (AP003504) hypothetical protein~similar to ... 47 2e-04
ref|NP_463750.1| (NC_003210) fusion protein, N-terminal par... 47 2e-04
gb|AAM74001.1|AF467001_2 (AF467001) YacA/HprT-like protein ... 47 3e-04
ref|NP_220361.1| (NC_000117) PP-loop superfamily ATPase [Ch... 46 3e-04
ref|NP_240949.1| (NC_002570) cell-cycle protein [Bacillus h... 46 3e-04
ref|XP_133411.1| (XM_133411) hypothetical protein XP_133411... 46 3e-04
ref|NP_296607.1| (NC_002620) MesJ/Ycf62 family protein [Chl... 46 3e-04
ref|NP_231873.1| (NC_002505) mesJ protein [Vibrio cholerae]... 46 4e-04
ref|NP_214296.1| (NC_000918) cell cycle protein MesJ [Aquif... 45 6e-04
ref|NP_225191.1| (NC_000922) PP-loop superfamily ATPase [Ch... 45 6e-04
ref|NP_294931.1| (NC_001263) cell cycle protein MesJ, putat... 45 0.001
pir||F75424 probable cell cycle protein MesJ/cytosine deami... 45 0.001
ref|NP_228012.1| (NC_000853) conserved hypothetical protein... 44 0.001
ref|NP_643069.1| (NC_003919) cell cycle protein [Xanthomona... 44 0.002
ref|NP_266175.1| (NC_002662) cell cycle protein MesJ [Lacto... 44 0.002
ref|NP_282593.1| (NC_002163) hypothetical protein Cj1453c [... 43 0.003
ref|NP_357604.1| (NC_003098) Conserved hypothetical protein... 42 0.005
ref|NP_245226.1| (NC_002663) MesJ [Pasteurella multocida] >... 42 0.005
ref|NP_344564.1| (NC_003028) MesJ/Ycf62 family protein [Str... 42 0.005
ref|NP_228389.1| (NC_000853) conserved hypothetical protein... 42 0.006
emb|CAA10333.1| (AJ131242) hypothetical protein [Wolinella ... 42 0.006
>ref|NP_207973.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
pir||F64667 conserved hypothetical protein HP1182 - Helicobacter pylori
(strain 26695)
gb|AAD08228.1| (AE000624) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 253
Score = 511 bits (1317), Expect = e-144
Identities = 253/253 (100%), Positives = 253/253 (100%)
Query: 1 MAYEISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFK 60
MAYEISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFK
Sbjct: 1 MAYEISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFK 60
Query: 61 AVTVHYGLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
AVTVHYGLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY
Sbjct: 61 AVTVHYGLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREAS 180
SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREAS
Sbjct: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREAS 180
Query: 181 SIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNV 240
SIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNV
Sbjct: 181 SIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNV 240
Query: 241 QANSFSDAKYLDA 253
QANSFSDAKYLDA
Sbjct: 241 QANSFSDAKYLDA 253
>ref|NP_223825.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71848 hypothetical protein jhp1108 - Helicobacter pylori (strain J99)
gb|AAD06688.1| (AE001538) putative [Helicobacter pylori J99]
Length = 253
Score = 501 bits (1291), Expect = e-141
Identities = 249/253 (98%), Positives = 250/253 (98%)
Query: 1 MAYEISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFK 60
MAYEISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFK
Sbjct: 1 MAYEISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFK 60
Query: 61 AVTVHYGLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
AVTVHYGLGE+LKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY
Sbjct: 61 AVTVHYGLGENLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREAS 180
SKAL EGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREAS
Sbjct: 121 SKALGEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREAS 180
Query: 181 SIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNV 240
SIHFVTSQNI VAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHP FFDSLENAFNNV
Sbjct: 181 SIHFVTSQNIRVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPHFFDSLENAFNNV 240
Query: 241 QANSFSDAKYLDA 253
QANSFSDAKYLDA
Sbjct: 241 QANSFSDAKYLDA 253
>ref|NP_281329.1| (NC_002163) hypothetical protein Cj0118 [Campylobacter jejuni]
pir||F81428 hypothetical protein Cj0118 [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB72602.1| (AL139074) hypothetical protein Cj0118 [Campylobacter jejuni]
Length = 251
Score = 235 bits (599), Expect = 4e-61
Identities = 120/243 (49%), Positives = 164/243 (67%), Gaps = 2/243 (0%)
Query: 5 ISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTV 64
+SKK++ V + NA + LI++GD++LLGLSGGKDS+ LA +L RMQ HAPFKF+ +AVT+
Sbjct: 4 LSKKLIRQVAQANAKFGLIKDGDRVLLGLSGGKDSLALAHLLNRMQAHAPFKFELEAVTL 63
Query: 65 HYGLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKAL 124
YG+GED L C+E GI+H ++ + I + RE SSFCS+ SR+RRG LY+ AL
Sbjct: 64 SYGMGEDYSHLHAHCEEHGIKHSVLDSNIYEVSGDTIRENSSFCSYFSRMRRGALYTYAL 123
Query: 125 EEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHF 184
E+G+NK+AIAHHLDDA ESFFMNF +NG+LR++ PIY+++ G+ VIRPLI VRE
Sbjct: 124 EKGFNKLAIAHHLDDAAESFFMNFIHNGALRTLAPIYQSKRGITVIRPLIFVRERQLRDN 183
Query: 185 VTSQNIPVAPDCNCPAKQPTSD--KPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQA 242
T + V + CP + + K P AR K L ++ HP+ F SL+ AF N+
Sbjct: 184 ATQNELSVIGNEFCPGMKLSEKNVKFPHAREEAKQLLANLEKDHPKLFTSLKTAFANLHT 243
Query: 243 NSF 245
SF
Sbjct: 244 ESF 246
>ref|NP_405872.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]
emb|CAC91140.1| (AJ414152) conserved hypothetical protein [Yersinia pestis]
Length = 313
Score = 150 bits (379), Expect = 1e-35
Identities = 88/253 (34%), Positives = 135/253 (52%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ VG+ A + +IEEGD++++ LSGGKDS + IL +QK AP F AV
Sbjct: 17 KLQKRLRRNVGQAIADFNMIEEGDRVMVCLSGGKDSYTMLDILQSLQKSAPINFSLIAVN 76
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G ED+ L +QG+E++I+ + E E + CS CSRLRRG LY
Sbjct: 77 LDQKQPGFPEDI--LPAYLDKQGVEYKIVEENTYGIVKEIIPEGKTTCSLCSRLRRGILY 134
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREA 179
A E G K+A+ HH DD +++ F+N Y G L+ MPP +++G +VIRPL RE
Sbjct: 135 RTATELGATKIALGHHRDDILQTLFLNMFYGGKLKGMPPKLMSDDGKHIVIRPLAYCREK 194
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
F ++ P+ P CN QP + R K+ L++ +P +++ +A N
Sbjct: 195 DIERFAVAREYPIIP-CNLCGSQPN-----LQRQVIKDMLRDWDKQYPGRIETMFSAMQN 248
Query: 240 VQANSFSDAKYLD 252
V + +D K D
Sbjct: 249 VVPSHLNDHKLFD 261
>ref|NP_460613.1| (NC_003197) putative ATPase [Salmonella typhimurium LT2]
gb|AAL20572.1| (AE008773) putative ATPase [Salmonella typhimurium LT2]
Length = 311
Score = 146 bits (369), Expect = 2e-34
Identities = 86/253 (33%), Positives = 134/253 (51%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ VG+ A + +IEEGD+I++ LSGGKDS + IL +Q+ AP F AV
Sbjct: 17 KLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVN 76
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E + L ++ G+E++I+ + EK E + CS CSRLRRG LY
Sbjct: 77 LDQKQPGFPEHI--LPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILY 134
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREA 179
A E G K+A+ HH DD +++ F+N Y G ++ MPP +++G +VIRPL RE
Sbjct: 135 RTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREK 194
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
I F ++ P+ P CN QP + IA + L++ +P +++ +A N
Sbjct: 195 DIIRFAEAKAFPIIP-CNLCGSQPNLQRQVIA-----DMLRDWDKRYPGRIETMFSAMQN 248
Query: 240 VQANSFSDAKYLD 252
V + D D
Sbjct: 249 VVPSHLCDTNLFD 261
>gb|AAL27304.1|AF370716_7 (AF370716) YdaO [Salmonella enterica subsp. enterica serovar
Enteritidis]
Length = 311
Score = 146 bits (368), Expect = 2e-34
Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ VG+ A + +IEEGD+I++ LSGGKDS + IL +Q+ AP F AV
Sbjct: 17 KLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVN 76
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E + L ++ G+E++I+ + EK E + CS CSRLRRG LY
Sbjct: 77 LDQKQPGFPEHI--LPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILY 134
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREA 179
A E G K+A+ HH DD +++ F+N Y G ++ MPP +++G +VIRPL RE
Sbjct: 135 RTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREK 194
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
+ F ++ P+ P CN QP + IA + L++ +P +++ +A N
Sbjct: 195 DIVRFAEAKAFPIIP-CNLCGSQPNLQRQVIA-----DMLRDWDKRYPGRIETMFSAMQN 248
Query: 240 VQANSFSDAKYLD 252
V + D D
Sbjct: 249 VVPSHLCDTNLFD 261
>ref|NP_455849.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD01676.1| (AL627270) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 311
Score = 146 bits (368), Expect = 2e-34
Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ VG+ A + +IEEGD+I++ LSGGKDS + IL +Q+ AP F AV
Sbjct: 17 KLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVN 76
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E + L ++ G+E++I+ + EK E + CS CSRLRRG LY
Sbjct: 77 LDQKQPGFPEHI--LPAYLEQLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILY 134
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREA 179
A E G K+A+ HH DD +++ F+N Y G ++ MPP +++G +VIRPL RE
Sbjct: 135 RTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREK 194
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
+ F ++ P+ P CN QP + IA + L++ +P +++ +A N
Sbjct: 195 DIVRFAEAKAFPIIP-CNLCGSQPNLQRQVIA-----DMLRDWDKRYPGRIETMFSAMQN 248
Query: 240 VQANSFSDAKYLD 252
V + D D
Sbjct: 249 VVPSHLCDTNLFD 261
>ref|NP_231075.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||D82199 conserved hypothetical protein VC1432 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF94589.1| (AE004222) conserved hypothetical protein [Vibrio cholerae]
Length = 310
Score = 145 bits (367), Expect = 3e-34
Identities = 86/253 (33%), Positives = 132/253 (51%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ G+ A + +IE+GD+I++ LSGGKDS + IL +QK AP F+ AV
Sbjct: 18 KLQKRIRRNTGQAIADFNMIEDGDRIMVCLSGGKDSFTMLDILMSLQKSAPISFELVAVN 77
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E + L + + G+E++I+ A + +K E + C+ CSRLRRG LY
Sbjct: 78 LDQKQPGFPEHV--LPEYLESLGVEYKIVEEDTYAIVQDKVPEGKTTCALCSRLRRGILY 135
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENG-LLVIRPLIKVREA 179
A E G K+A+ HH DD +E+ F+N Y G ++ MPP ++NG +VIRPL RE
Sbjct: 136 RTAKELGATKIALGHHRDDILETLFLNMFYGGKMKGMPPKLVSDNGEHVVIRPLAYCREK 195
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
I + + P+ P CN QP + R A K L + P +++ A N
Sbjct: 196 DIIKYSDMRGYPIIP-CNLCGSQPN-----LQRQAVKQMLNDWDKRFPGRIETMFRAMQN 249
Query: 240 VQANSFSDAKYLD 252
V + +D D
Sbjct: 250 VVPSHLADFSLFD 262
>ref|NP_439523.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|Q57184|YDAO_HAEIN Hypothetical protein HI1371.1
gb|AAC23019.1| (U32817) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 313
Score = 145 bits (366), Expect = 4e-34
Identities = 85/253 (33%), Positives = 132/253 (51%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ VG A + +IE+GDK+++ LSGGKDS L IL +Q+ AP KFD AV
Sbjct: 20 KLQKRLRRNVGNAIADFGMIEDGDKVMVCLSGGKDSYTLLDILLNLQQSAPIKFDIVAVN 79
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E + L + + G++++I+ + EK E + CS CSRLRRG LY
Sbjct: 80 LDQKQPGFPEHV--LPEYLESIGVDYKIVQENTYGIVKEKIPEGKTTCSLCSRLRRGILY 137
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENG-LLVIRPLIKVREA 179
A E G K+A+ HH DD + + F+N Y G ++SMPP +++G +VIRPL +E
Sbjct: 138 RTATELGATKIALGHHRDDMLATLFLNMFYGGKIKSMPPKLISDDGKQIVIRPLAYCKEK 197
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
+ ++ P+ P CN QP + R K L +P +++ +A N
Sbjct: 198 DIEKYAIAKEFPIIP-CNLCGSQPN-----LQRQVVKEMLNTWDRQYPGRLETMFSAMQN 251
Query: 240 VQANSFSDAKYLD 252
+ + D K D
Sbjct: 252 ITLSHMCDPKLFD 264
>ref|NP_415860.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P76055|YDAO_ECOLI Hypothetical protein ydaO
pir||C64884 ydaO protein - Escherichia coli
gb|AAC74426.1| (AE000232) orf, hypothetical protein [Escherichia coli K12]
Length = 311
Score = 144 bits (364), Expect = 7e-34
Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ VG+ A + +IEEGD+I++ LSGGKDS + IL +Q+ AP F AV
Sbjct: 17 KLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVN 76
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E + L + ++ G+E++I+ + EK E + CS CSRLRRG LY
Sbjct: 77 LDQKQPGFPEHV--LPEYLEKLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILY 134
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREA 179
A E G K+A+ HH DD +++ F+N Y G ++ MPP +++G +VIRPL RE
Sbjct: 135 RTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREK 194
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
F ++ P+ P CN QP + IA + L++ +P +++ +A N
Sbjct: 195 DIQRFADAKAFPIIP-CNLCGSQPNLQRQVIA-----DMLRDWDKRYPGRIETMFSAMQN 248
Query: 240 VQANSFSDAKYLD 252
V + D D
Sbjct: 249 VVPSHLCDTNLFD 261
>ref|NP_287839.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_309955.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG56453.1|AE005371_9 (AE005371) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB35351.1| (AP002556) hypothetical protein [Escherichia coli O157:H7]
Length = 311
Score = 144 bits (364), Expect = 7e-34
Identities = 85/253 (33%), Positives = 134/253 (52%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ VG+ A + +IEEGD+I++ LSGGKDS + IL +Q+ AP F AV
Sbjct: 17 KLQKRLRRNVGEAIADFNMIEEGDRIMVCLSGGKDSYTMLEILRNLQQSAPINFSLVAVN 76
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E + L + ++ G+E++I+ + EK E + CS CSRLRRG LY
Sbjct: 77 LDQKQPGFPEHV--LPEYLEKLGVEYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILY 134
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREA 179
A E G K+A+ HH DD +++ F+N Y G ++ MPP +++G +VIRPL RE
Sbjct: 135 RTATELGATKIALGHHRDDILQTLFLNMFYGGKMKGMPPKLMSDDGKHIVIRPLAYCREK 194
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
F ++ P+ P CN QP + IA + L++ +P +++ +A N
Sbjct: 195 DIQRFADAKAFPIIP-CNLCGSQPNLQRQVIA-----DMLRDWDKRYPGRIETMFSAMQN 248
Query: 240 VQANSFSDAKYLD 252
V + D D
Sbjct: 249 VVPSHLCDTNLFD 261
>ref|NP_284189.1| (NC_003116) hypothetical protein NMA1465 [Neisseria meningitidis
Z2491]
pir||E81837 hypothetical protein NMA1465 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84699.1| (AL162756) hypothetical protein NMA1465 [Neisseria meningitidis
Z2491]
Length = 319
Score = 144 bits (364), Expect = 7e-34
Identities = 88/253 (34%), Positives = 132/253 (51%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++SK++ H VG + +IE GDKI++ LSGGKDS L IL R+Q AP F AV
Sbjct: 13 KLSKRLRHAVGDAINDFNMIEPGDKIMVCLSGGKDSYALLDILRRLQASAPIDFQLVAVN 72
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E++ L + G+ ++I+ +T+ E + CS CSRLRRG LY
Sbjct: 73 LDQKQPGFPEEV--LPTYLESIGVPYKIVEEDTYSTVKRVLDEGKTTCSLCSRLRRGILY 130
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENG-LLVIRPLIKVREA 179
A E G K+A+ HH DD + + F+N Y G L++MPP ++NG +VIRPL V+E
Sbjct: 131 RTAKELGCTKIALGHHRDDILATLFLNMFYGGKLKAMPPKLVSDNGEHIVIRPLAYVKEK 190
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
I + + P+ P CN QP + R + L++ P +S+ +A N
Sbjct: 191 DLIKYAELKQFPIIP-CNLCGSQPN-----LQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
Query: 240 VQANSFSDAKYLD 252
V + +D + D
Sbjct: 245 VVPSHLADTELFD 257
>ref|NP_245543.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK02690.1| (AE006096) unknown [Pasteurella multocida]
Length = 314
Score = 143 bits (361), Expect = 2e-33
Identities = 84/248 (33%), Positives = 133/248 (52%), Gaps = 12/248 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ VG A + +IEEGDK+++ LSGGKDS L IL ++ +AP F+ AV
Sbjct: 19 KLQKRLRRNVGNAIADFNMIEEGDKVMVCLSGGKDSYTLLDILLNLRLNAPIHFEIVAVN 78
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E + L + Q G++++I+ + EK E + CS CSRLRRG LY
Sbjct: 79 LDQKQPGFPEHI--LPEYLQSIGVDYKIVEENTYGIVKEKIPEGKTTCSLCSRLRRGILY 136
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENG-LLVIRPLIKVREA 179
A E G K+A+ HH DD +E+ F+N Y G L+SMPP +++G +VIRPL +E
Sbjct: 137 RTATELGATKIALGHHRDDMLETLFLNMFYGGKLKSMPPKLISDDGKQIVIRPLAYCKEK 196
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
+ +++ P+ P CN QP + R K L++ +P +++ +A N
Sbjct: 197 DIEKYAQAKHFPIIP-CNLCGSQPN-----LQRQVVKEMLQKWDRQYPGRIETMFSAIQN 250
Query: 240 VQANSFSD 247
+ + D
Sbjct: 251 IVPSHLCD 258
>ref|NP_294203.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||C75514 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF10060.1|AE001907_6 (AE001907) conserved hypothetical protein [Deinococcus radiodurans]
Length = 299
Score = 142 bits (358), Expect = 3e-33
Identities = 83/246 (33%), Positives = 129/246 (51%), Gaps = 8/246 (3%)
Query: 9 VLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL 68
++ VG+ Y++IE+GD++++ LSGGKDS L +L +QK AP F+ AV + G
Sbjct: 24 IVRQVGQAIGDYRMIEQGDRVMVCLSGGKDSYTLLDVLLHLQKKAPIDFEVVAVNLDQGQ 83
Query: 69 -GEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEG 127
G L G+ H+I+ + + EK E + CS CSRLRRG LY A E G
Sbjct: 84 PGFPKDVLPRYLTALGVRHDILTEDTYSVVKEKTPEGKTTCSLCSRLRRGILYQHAREIG 143
Query: 128 YNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREASSIHFVT 186
K+A+ HH +D +E+ FMN + L++MPP ++++G +VIRPL V EA I +
Sbjct: 144 ATKIALGHHREDILETLFMNMFFGARLKAMPPKLQSDDGTNVVIRPLAYVAEADIIRYAQ 203
Query: 187 SQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQANSFS 246
++ PV P CN QP + R + L+ + HP +++ + V +
Sbjct: 204 AREFPVIP-CNLCGAQPN-----LQRKVVGDMLEGWEREHPGRLNNILRSLTRVTPSHLL 257
Query: 247 DAKYLD 252
D + D
Sbjct: 258 DRELYD 263
>ref|NP_274057.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||F81129 conserved hypothetical protein NMB1023 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41423.1| (AE002453) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 319
Score = 140 bits (353), Expect = 1e-32
Identities = 86/253 (33%), Positives = 131/253 (50%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++SK++ H VG + +IE DKI++ LSGGKDS L IL ++Q AP F AV
Sbjct: 13 KLSKRLRHAVGDAINDFNMIEPDDKIMVCLSGGKDSYALLDILRQLQASAPIDFQLVAVN 72
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E++ L + G+ ++I+ +T+ E + CS CSRLRRG LY
Sbjct: 73 LDQKQPGFPEEV--LPTYLESIGVPYKIVEEDTYSTVKRVLDEGKTTCSLCSRLRRGILY 130
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENG-LLVIRPLIKVREA 179
A E G K+A+ HH DD + + F+N Y G L++MPP ++NG +VIRPL V+E
Sbjct: 131 RTAKELGCTKIALGHHRDDILATLFLNMFYGGKLKAMPPKLVSDNGEHIVIRPLAYVKEK 190
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
I + + P+ P CN QP + R + L++ P +S+ +A N
Sbjct: 191 DLIKYAELKQFPIIP-CNLCGSQPN-----LQRQVIGDMLRDWDKRFPGRIESMFSALQN 244
Query: 240 VQANSFSDAKYLD 252
V + +D + D
Sbjct: 245 VVPSHLADTELFD 257
>ref|NP_249883.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||C83497 conserved hypothetical protein PA1192 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG04581.1|AE004549_8 (AE004549) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 274
Score = 140 bits (353), Expect = 1e-32
Identities = 86/253 (33%), Positives = 133/253 (51%), Gaps = 12/253 (4%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++ + G+ + +IE+GDK+++ LSGGKDS + IL +QK AP +F+ AV
Sbjct: 10 KLQKRLRRLAGEAITDFNMIEDGDKVMVCLSGGKDSYTMLDILLYLQKVAPIRFEIVAVN 69
Query: 64 VHY---GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
+ G E + L + + G+E+ I+ + + EK E + CS CSRLRRGTLY
Sbjct: 70 MDQKQPGFPEHV--LPEYLKSIGVEYHIVEKDTYSVVKEKIPEGKTTCSLCSRLRRGTLY 127
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREA 179
+ A E G K+A+ HH DD +E+FF+N Y G+L++MPP A++G +VIRPL E
Sbjct: 128 TFADEIGATKMALGHHRDDILETFFLNMFYGGTLKAMPPKLLADDGRNVVIRPLAYCSEK 187
Query: 180 SSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
+ + P+ P CN Q + R K L E + P + + A N
Sbjct: 188 DIEAYSQLKEFPIIP-CNLCGSQEN-----LQRQVVKEMLLEWERKSPGRTEIMFRALQN 241
Query: 240 VQANSFSDAKYLD 252
V + +D D
Sbjct: 242 VVPSQLADRNLFD 254
>ref|NP_518296.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD13703.1| (AL646057) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 312
Score = 140 bits (352), Expect = 2e-32
Identities = 83/243 (34%), Positives = 124/243 (50%), Gaps = 12/243 (4%)
Query: 14 GKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHY---GLGE 70
G+ +K+IE+GD +L+ LSGGKDS + +L +QK AP F A+ + G E
Sbjct: 19 GRAIGDFKMIEDGDTVLVCLSGGKDSYTMLSVLMALQKRAPIDFKLIAMNLDQKQPGFPE 78
Query: 71 DLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNK 130
D+ L ++ G+E+ I+ + + EK E + CS CSRLRRG +Y A E G NK
Sbjct: 79 DV--LPGYLKKVGVEYVIVEADTYSIVKEKVPEGKTTCSLCSRLRRGVIYRTAKELGANK 136
Query: 131 VAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENG-LLVIRPLIKVREASSIHFVTSQN 189
+A+ HH DD V +FF+N + G +++MPP +NG +VIRPL E + +
Sbjct: 137 IALGHHRDDIVNTFFLNMFFGGKMKAMPPKLATDNGDHIVIRPLAYCAEKEIAAYARAME 196
Query: 190 IPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQANSFSDAK 249
P+ P CN Q + R K L E + P D++ +A NV + +D
Sbjct: 197 FPIIP-CNLCGSQEN-----LQRKKVKEMLLEWERQAPGRIDNIFSALQNVVPSHLADTD 250
Query: 250 YLD 252
D
Sbjct: 251 LFD 253
>ref|NP_297859.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
pir||G82791 conserved hypothetical protein XF0569 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF83379.1|AE003903_15 (AE003903) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 312
Score = 134 bits (336), Expect = 1e-30
Identities = 79/251 (31%), Positives = 128/251 (50%), Gaps = 8/251 (3%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
+++K++ VG+ A + +IE DKI++ LSGGKDS L +L +++ AP F+ AV
Sbjct: 39 KLAKRLRRQVGQAIADFGMIEANDKIMVCLSGGKDSYTLLDMLLQLRAKAPVPFELTAVN 98
Query: 64 VHYGL-GEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSK 122
+ G L + G+ H II + + E + C+ CSR+RRG LY+
Sbjct: 99 LDQKQPGFPKHVLPEYLSSIGMPHHIIEQDTYSVVTRVVPEGKTLCALCSRMRRGALYAY 158
Query: 123 ALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREASS 181
A +G+ K+A+ HH DD V +FFMN ++ L MPP R++NG +VIRPL V E
Sbjct: 159 AETQGFTKIALGHHRDDMVATFFMNLFHHAKLSGMPPKLRSDNGKHVVIRPLAYVSETDI 218
Query: 182 IHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQ 241
I + ++ P+ P CN Q + + + LK + +P + + A N++
Sbjct: 219 IAYADAREFPIIP-CNLCGSQENLQRKQVGVI-----LKAWEKEYPGRIEQIARALGNIR 272
Query: 242 ANSFSDAKYLD 252
+ +D D
Sbjct: 273 PSQLADQSLFD 283
>ref|NP_639438.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM43320.1| (AE012533) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 300
Score = 131 bits (329), Expect = 8e-30
Identities = 79/250 (31%), Positives = 128/250 (50%), Gaps = 8/250 (3%)
Query: 5 ISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTV 64
++K++ H VG+ A + +I GDK+++ LSGGKDS L +L ++Q+ AP F AV +
Sbjct: 28 LAKRLRHAVGQAIADFGMIAPGDKVMVCLSGGKDSYTLLDMLLQLQRSAPVPFTLVAVNL 87
Query: 65 HYGLGE-DLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKA 123
+ L + Q + +II + ++ + + CS CSRLRRG LY+ A
Sbjct: 88 DQKQPDFPADVLPTYLRAQQVPFDIIEQDTYSVVSRVIPQGKTMCSLCSRLRRGALYAYA 147
Query: 124 LEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREASSI 182
G K+A+ HH DD V +FFMN ++ L +M P R+++G +VIRPL VREA
Sbjct: 148 QAHGVTKIALGHHRDDIVATFFMNLFHHARLAAMAPKLRSDDGAHVVIRPLAYVREADIA 207
Query: 183 HFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQA 242
+ +++ P+ P CN Q + + R+ L++ P D + A +V+
Sbjct: 208 AYAQARHFPIIP-CNLCGSQENLQRQQVGRM-----LQQWDREQPGRVDQIARALGDVRP 261
Query: 243 NSFSDAKYLD 252
+D D
Sbjct: 262 EQLADRTLFD 271
>ref|NP_623133.1| (NC_003869) predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Thermoanaerobacter tengcongensis]
gb|AAM24737.1| (AE013109) predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Thermoanaerobacter tengcongensis]
Length = 235
Score = 130 bits (326), Expect = 2e-29
Identities = 81/230 (35%), Positives = 129/230 (55%), Gaps = 6/230 (2%)
Query: 7 KKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHY 66
+++L + + +++I+EGD I +G+SGGKDSI L L +++ P KF+ + +
Sbjct: 2 QEILGKIRRAVQDFEMIQEGDAIAVGVSGGKDSITLLYGLHLLKRFYPIKFEVMGLMLSL 61
Query: 67 GLGE-DLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALE 125
G D + + C+E+GI + +T+I + + R+EK+ CS C+ LRRG L A E
Sbjct: 62 GFENFDPTPIKNFCEEKGIPFFVKHTEIKKIVFDYRKEKNP-CSLCANLRRGALNDFAKE 120
Query: 126 EGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPI-YRAENGLLVIRPLIKVREASSIHF 184
+G NKVA+AHH DD + +F MN YNG L + P+ + + + +IRPLI VRE
Sbjct: 121 KGCNKVALAHHYDDLIVTFMMNLFYNGRLHTFEPVTFLDRSKITLIRPLIYVREKEVRSA 180
Query: 185 VTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLE 234
V N+PV + CP T+ + I L +N KE+ L R F +++
Sbjct: 181 VKKNNLPVVEN-PCPMAGNTT-RHSIENL-IRNLEKEIPELDKRIFTAIK 227
>ref|NP_561906.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB80696.1| (AP003188) conserved hypothetical protein [Clostridium perfringens]
Length = 244
Score = 129 bits (325), Expect = 2e-29
Identities = 82/234 (35%), Positives = 124/234 (52%), Gaps = 10/234 (4%)
Query: 7 KKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHY 66
+K+L + Y LIE+GDKI +GLSGGKDS+ L IL Q+ +P KF+ A+T++
Sbjct: 5 QKLLSKTRQAIKEYNLIEDGDKIAVGLSGGKDSLTLLHILKNYQRFSPEKFELIAITLNP 64
Query: 67 GLGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEE 126
G G D L +LC+ + I T I + + ++EK+ CS C+ LRRG L A +
Sbjct: 65 G-GVDNSPLHELCKNIDVPFYEIQTDIKEIVFDIKKEKNP-CSLCANLRRGALNDNAEKL 122
Query: 127 GYNKVAIAHHLDDAVESFFMNFTYNGSLRSM-PPIYRAENGLLVIRPLIKVREASSIHFV 185
G NKVA+ HH DDA+E+ ++ +Y G + P + +N L +IRP++ + E+ V
Sbjct: 123 GCNKVALGHHKDDALETLMLSISYEGRINCFSPKSFMHKNNLTLIRPMVFIEESQIRKAV 182
Query: 186 TSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNN 239
N PV + CPA T R KN ++ + P F +L + N
Sbjct: 183 AEYNFPVIKN-PCPADGKTK------REDMKNLIRSLDKTMPGFKKNLFKSLTN 229
>ref|NP_540049.1| (NC_003317) ATPases of the PP superfamily [Brucella melitensis]
gb|AAL52313.1| (AE009552) ATPases of the PP superfamily [Brucella melitensis]
Length = 293
Score = 126 bits (317), Expect = 2e-28
Identities = 78/251 (31%), Positives = 123/251 (48%), Gaps = 8/251 (3%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K+++ + + + +++ GD+ ++ LSGGKDS L +L ++ + AV
Sbjct: 32 KLRKRLVRLTRQAIEDFAMVKPGDRWMVCLSGGKDSYGLLALLLDLKWRGLLPVELLAVN 91
Query: 64 VHYGLGEDLKW-LSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSK 122
+ G K L D GIEH I Y + + +K E S++CS CSRLRRG LY
Sbjct: 92 LDQGQPNFPKHILPDFLTRYGIEHRIEYQDTYSIVTDKLPETSTYCSLCSRLRRGNLYRI 151
Query: 123 ALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPP-IYRAENGLLVIRPLIKVREASS 181
A EEG + + + HH +D +E+FFMN + G L +MPP + E L+V RPL E
Sbjct: 152 AREEGCSAIVLGHHREDILETFFMNLFHGGRLAAMPPKLLNDEGDLMVFRPLAYAAEDDL 211
Query: 182 IHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQ 241
F + P+ P C + + R A K L +++ P D++ A NV+
Sbjct: 212 EKFANAMQFPIIPCDLC------GSQDGLQRNAMKAMLIDIEKRMPGRKDTMIRALTNVR 265
Query: 242 ANSFSDAKYLD 252
+ D K D
Sbjct: 266 PSHLLDRKLFD 276
>ref|NP_101931.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB47717.1| (AP002994) hypothetical protein [Mesorhizobium loti]
Length = 271
Score = 123 bits (308), Expect = 2e-27
Identities = 76/251 (30%), Positives = 123/251 (48%), Gaps = 8/251 (3%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++L + + + ++E G + L+ LSGGKDS L +L ++ + A
Sbjct: 9 KLRKRLLRLTRQAIEDFSMVEPGQRWLVALSGGKDSYGLLALLLDLKWRGLLPVELLACN 68
Query: 64 VHYGLGEDLKW-LSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSK 122
+ G K L D GI H I Y + + K E S++CS CSRLRRG LY
Sbjct: 69 LDQGQPNFPKHILPDYLNANGIAHRIEYQDTYSVVTNKLPEGSTYCSLCSRLRRGHLYRI 128
Query: 123 ALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPP-IYRAENGLLVIRPLIKVREASS 181
A EEG + + + HH +D +E+FFMN + G L +MPP + E ++V+RPL E
Sbjct: 129 AREEGCSALVLGHHREDILETFFMNLFHGGRLAAMPPKLLNDEGDVMVLRPLSYCAEIDL 188
Query: 182 IHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQ 241
F + P+ P C +++ + R A K L++++ P D++ A +N +
Sbjct: 189 EKFAAAMRFPIIPCDLCGSQE------GLQRNAMKAMLEDIEKRMPGRKDTMIRALSNTR 242
Query: 242 ANSFSDAKYLD 252
+ D K D
Sbjct: 243 PSHLLDRKLFD 253
>ref|NP_644523.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM39059.1| (AE012074) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 305
Score = 122 bits (305), Expect = 5e-27
Identities = 77/250 (30%), Positives = 123/250 (48%), Gaps = 8/250 (3%)
Query: 5 ISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTV 64
+ K++ VG+ A + +I GDKI++ LSGGKDS L +L ++Q+ AP F AV +
Sbjct: 30 LGKRLQRQVGQAIADFGMIAPGDKIMVCLSGGKDSYTLLDMLLQLQRKAPVPFSLVAVNL 89
Query: 65 HYGLGE-DLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKA 123
+ L + G+ I+ + ++ + CS CSRLRRG LY+ A
Sbjct: 90 DQKQPDFPAHVLPAYLRGLGVPFAIVEQDTYSVVSRVIPAGKTMCSLCSRLRRGALYAYA 149
Query: 124 LEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGL-LVIRPLIKVREASSI 182
G K+A+ HH DD V +FFMN ++ L +M P R+++G +VIRPL VREA
Sbjct: 150 QTHGVTKIALGHHRDDIVATFFMNLFHHARLAAMAPKLRSDDGAHVVIRPLAYVREADIA 209
Query: 183 HFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQA 242
+ ++ P+ P CN Q + + +L L++ P + + A +V+
Sbjct: 210 AYAQARQFPIIP-CNLCGSQENLQRQQVGKL-----LQQWDRESPGRVEQIARALGDVRP 263
Query: 243 NSFSDAKYLD 252
+D D
Sbjct: 264 EQLADRTLFD 273
>ref|NP_497589.1| (NM_065188) Y71H2B.5.p [Caenorhabditis elegans]
gb|AAK93869.1|AC024202_7 (AC024202) Hypothetical protein Y71H2B.5 [Caenorhabditis elegans]
Length = 894
Score = 118 bits (295), Expect = 7e-26
Identities = 87/241 (36%), Positives = 126/241 (52%), Gaps = 20/241 (8%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQ----KHAPFKFDF 59
E+ KKV I+ + K+I +GDK+L+ LSGGKDS+ L IL Q K F+
Sbjct: 638 EMYKKVTDIIHQL----KMIRDGDKVLVCLSGGKDSLSLLHILRHYQQRCNKARSTSFEL 693
Query: 60 KAVTVHYGLGE-DLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGT 118
A+TV G E + + L + C+ I++ I K S C+FCSR++RG
Sbjct: 694 GAITVDPGSAEYNPRPLIEYCRRLNIDYFYEEQDIIGAAR-KTPGLRSICAFCSRMKRGR 752
Query: 119 LYSKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLL-VIRPLIKVR 177
L + A G+N +A+ HLDD ESFF+ NG+L +M Y ++G L VIRPL+ VR
Sbjct: 753 LAAAAQLHGWNVLAMGQHLDDLAESFFIAAFQNGNLSTMKAQYTTKDGALRVIRPLVMVR 812
Query: 178 EASSIHFVTSQNIPVAPDCNCPA--KQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLEN 235
E + +F + +PV + NCPA Q T R K L + + + P F+SL +
Sbjct: 813 EKALRNFAEDKKLPVVAE-NCPACFNQATE------RHRVKQLLAQQELIFPDLFNSLRS 865
Query: 236 A 236
A
Sbjct: 866 A 866
>ref|NP_603765.1| (NC_003454) ATPases of the PP superfamily [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gb|AAL95064.1| (AE010595) ATPases of the PP superfamily [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 277
Score = 117 bits (294), Expect = 9e-26
Identities = 75/236 (31%), Positives = 124/236 (51%), Gaps = 8/236 (3%)
Query: 7 KKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHY 66
KK+ K + LI++GDKI +G+SGGKDS++L + ++K F+ K ++++
Sbjct: 32 KKIWKNFIKAIKDFDLIKDGDKIAVGVSGGKDSLLLCKLFQELKKDKSKNFEVKFISMNP 91
Query: 67 GLGE-DLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALE 125
G D+ + E GI+ E+ + E+ C C+++RRG LY K E
Sbjct: 92 GFEAIDIDKFKENLIEMGIDCELFDANVWQIAFEEAPNNP--CFLCAKMRRGVLYKKVEE 149
Query: 126 EGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLL-VIRPLIKVREASSIHF 184
G+NK+A+ HH DD VE+ +N + G++++M P + +G + +IRPL VRE I+F
Sbjct: 150 LGFNKLALGHHFDDIVETTMINMFFAGTVKTMLPKVPSTSGKMDIIRPLAYVREKDIINF 209
Query: 185 VTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNV 240
+ +I A C C + S K R K L+E++ +P S+ NA N+
Sbjct: 210 MKYNDIQ-AMSCGCSIE---SGKVDSKRKEIKFLLQELEMKNPNIKQSIFNAMKNI 261
>ref|NP_385891.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC46364.1| (AL591788) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 313
Score = 117 bits (293), Expect = 1e-25
Identities = 76/251 (30%), Positives = 120/251 (47%), Gaps = 8/251 (3%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++L V + + +++ + L+G+SGGKDS L +L +Q + A
Sbjct: 59 KLRKRLLRQVRQALDDFGMLKGSRRWLVGVSGGKDSYSLLALLMDLQWRGLLPVELVACN 118
Query: 64 VHYGLGEDLKW-LSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSK 122
+ G K L D + G++H I Y + + EK +++CS CSRLRRG LY
Sbjct: 119 LDQGQPNFPKHVLPDYLRSIGVKHRIEYRDTYSIVKEKVPAGATYCSLCSRLRRGNLYRI 178
Query: 123 ALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMP-PIYRAENGLLVIRPLIKVREASS 181
EEG + + + HH +D +E+FFMNF + G L SMP + E L V+RPL E
Sbjct: 179 GREEGCDALVLGHHREDILETFFMNFFHGGRLASMPAKLLNDEGDLTVLRPLAYAAEDDL 238
Query: 182 IHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQ 241
F + P+ P C + + R A K L +++ P D++ A +V
Sbjct: 239 AKFAAAMEFPIIPCDLC------GSQDGLERNAMKAMLADIERRMPGRKDTMLRALGHVN 292
Query: 242 ANSFSDAKYLD 252
A+ D K D
Sbjct: 293 ASHLLDPKLFD 303
>ref|NP_354840.1| (NC_003062) AGR_C_3410p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK87625.1| (AE008105) AGR_C_3410p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 313
Score = 111 bits (277), Expect = 9e-24
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++L V + + ++ + L+GLSGGKDS L +L ++ + A
Sbjct: 49 KLRKRLLRNVRQAFEDFGMLNGQKRWLVGLSGGKDSYGLLALLLDLKWRGLLPVELVACN 108
Query: 64 VHYGLGEDLKW-LSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSK 122
+ G K L + + G+ H I Y + + EK ++CS CSRLRRG LY
Sbjct: 109 LDQGQPNFPKHVLPEYLAKIGVAHRIEYRDTYSIVKEKVPSGGTYCSLCSRLRRGNLYRI 168
Query: 123 ALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMP-PIYRAENGLLVIRPLIKVREASS 181
A EEG + + + HH +D +E+FFMNF + G L MP + E L+V+RPL E
Sbjct: 169 AREEGCDALLLGHHREDILETFFMNFFHGGRLAGMPAKLLNDEGDLMVMRPLAYCAEEDM 228
Query: 182 IHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQ 241
F + P+ P C + + R A K+ L +++ P D + A +V
Sbjct: 229 AKFAAAMEFPIIPCDLC------GSQDGLQRNAMKDMLADIERRMPGRKDVMLRALAHVN 282
Query: 242 ANSFSDAKYLD 252
+ D K D
Sbjct: 283 PSHLLDPKLFD 293
>ref|NP_532538.1| (NC_003304) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL42854.1| (AE009140) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 311
Score = 111 bits (277), Expect = 9e-24
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 8/251 (3%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
++ K++L V + + ++ + L+GLSGGKDS L +L ++ + A
Sbjct: 47 KLRKRLLRNVRQAFEDFGMLNGQKRWLVGLSGGKDSYGLLALLLDLKWRGLLPVELVACN 106
Query: 64 VHYGLGEDLKW-LSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSK 122
+ G K L + + G+ H I Y + + EK ++CS CSRLRRG LY
Sbjct: 107 LDQGQPNFPKHVLPEYLAKIGVAHRIEYRDTYSIVKEKVPSGGTYCSLCSRLRRGNLYRI 166
Query: 123 ALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMP-PIYRAENGLLVIRPLIKVREASS 181
A EEG + + + HH +D +E+FFMNF + G L MP + E L+V+RPL E
Sbjct: 167 AREEGCDALLLGHHREDILETFFMNFFHGGRLAGMPAKLLNDEGDLMVMRPLAYCAEEDM 226
Query: 182 IHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQ 241
F + P+ P C + + R A K+ L +++ P D + A +V
Sbjct: 227 AKFAAAMEFPIIPCDLC------GSQDGLQRNAMKDMLADIERRMPGRKDVMLRALAHVN 280
Query: 242 ANSFSDAKYLD 252
+ D K D
Sbjct: 281 PSHLLDPKLFD 291
>ref|NP_276852.1| (NC_000916) conserved protein [Methanothermobacter
thermautotrophicus] [Methanothermobacter
thermautotrophicus str. Delta H]
pir||A69100 conserved hypothetical protein MTH1742 - Methanobacterium
thermoautotrophicum (strain Delta H)
gb|AAB86212.1| (AE000930) conserved protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 270
Score = 87.8 bits (216), Expect = 1e-16
Identities = 65/233 (27%), Positives = 117/233 (49%), Gaps = 20/233 (8%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWL 75
YKLIE GD++L+GLSGGKDS+M+ IL +++ + +AVT+ G+G + ++
Sbjct: 7 YKLIERGDRVLVGLSGGKDSVMVIDILDELRERN--IIELEAVTIDEGIGGYREDGVRIA 64
Query: 76 SDLCQEQGIEHEIIYTQIAA--TINEKRREKS-SFCSFCSRLRRGTLYSKALEEGYNKVA 132
+C ++GI H ++ + A T++E + S S C++C RR L +A + K+A
Sbjct: 65 RKICADRGIPHRVVSLEDYAGITLDEIMKNPSRSACTYCGVFRRWILNREARKSKATKIA 124
Query: 133 IAHHLDDAVESFFMNFTYNG--SLRSMPPIYRAENGLLV--IRPLIKVREASSIHFVTSQ 188
H+LDD ++ MN+ +L + P+ + G + I+PL ++ E +V ++
Sbjct: 125 TGHNLDDETQAIVMNYLEGNLENLTRIGPMTSSAGGRFIPKIKPLREIPEKEVALYVLAR 184
Query: 189 NIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQ 241
+ V CP + R +FLK++ P S F+ ++
Sbjct: 185 GLDVHL-AGCPYASGS------FRREIGDFLKQISVKRPTIMYSTLRGFDRIK 230
>ref|NP_579487.1| (NC_003413) n-type ATP pyrophosphatase superfamily [Pyrococcus
furiosus DSM 3638]
gb|AAL81882.1| (AE010274) n-type ATP pyrophosphatase superfamily [Pyrococcus
furiosus DSM 3638]
Length = 319
Score = 83.2 bits (204), Expect = 2e-15
Identities = 70/231 (30%), Positives = 111/231 (47%), Gaps = 25/231 (10%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL---- 68
V +T Y++I+ G+K+ + +SGGKDS++L ILA+++K F F+ A+T+ G+
Sbjct: 34 VKRTIRKYRMIKRGEKVGVAVSGGKDSVVLMHILAKLRK--KFPFELVAITIDEGIKGYR 91
Query: 69 GEDLKWLSDLCQEQGIEHEIIYTQ--IAATINE------KRREKSSFCSFCSRLRRGTLY 120
+ ++ + G+EH I + I T++E R E+ CS+C RR L
Sbjct: 92 DKSVEVARKNAELLGVEHHIYRFKDFIGFTLDETVEIMGPREERVGACSYCGVWRRWLLN 151
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYN--GSLRSMPPIYRAENGLLV--IRPLIKV 176
A E G +K+A+ +LDD V+ F MN L P Y + LV I+PL +V
Sbjct: 152 KAAEELGVDKLALGLNLDDEVQVFLMNLMRGDVARLGRTGPYYEVIHEGLVPRIKPLREV 211
Query: 177 REASSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHP 227
E + + NI V CP R +++L EM+ HP
Sbjct: 212 PEKEIVLYAVLNNIEVDLS-ECPYATEA------FRAEIRDWLNEMEEKHP 255
>ref|NP_143524.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||H71048 hypothetical protein PH1680 - Pyrococcus horikoshii
dbj|BAA30792.1| (AP000006) 320aa long hypothetical protein [Pyrococcus horikoshii]
Length = 320
Score = 80.5 bits (197), Expect = 2e-14
Identities = 69/231 (29%), Positives = 110/231 (46%), Gaps = 25/231 (10%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL---- 68
V +T Y++I++G++I + +SGGKDS++L +LA+++K F F+ A+T+ G+
Sbjct: 34 VKRTIRKYRMIKKGERIGVAVSGGKDSVVLLHLLAKLRK--KFPFEIVAITIDEGIKGYR 91
Query: 69 GEDLKWLSDLCQEQGIEHEI--IYTQIAATINE------KRREKSSFCSFCSRLRRGTLY 120
+ +K + G+EH I I T++E R E+ CS+C RR L
Sbjct: 92 DKSIKVAKKNAELLGVEHHIYRFKDYIGFTLDETVEIMGARGERLGACSYCGVWRRWLLN 151
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYN--GSLRSMPPIYRAENGLLV--IRPLIKV 176
A E +K+A+ +LDD V+ F MN L P Y + LV I+PL +V
Sbjct: 152 KAAEELKVDKLALGLNLDDEVQMFLMNLMRGDVARLGRTGPYYEVIHEGLVPRIKPLREV 211
Query: 177 REASSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHP 227
E + + NI V CP R +++L EM+ HP
Sbjct: 212 PEKEIVLYAVLNNIEVDLS-ECPYAVEA------FRAEIRDWLNEMEEKHP 255
>ref|NP_070424.1| (NC_000917) conserved hypothetical protein [Archaeoglobus fulgidus]
pir||B69449 conserved hypothetical protein AF1595 - Archaeoglobus fulgidus
gb|AAB89651.1| (AE000992) conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 304
Score = 79.0 bits (193), Expect = 5e-14
Identities = 65/232 (28%), Positives = 117/232 (50%), Gaps = 21/232 (9%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWL 75
Y +I++GD+I + LSGGKDS+ LA +L ++ +F A+T+ G+ ++
Sbjct: 42 YDMIQKGDRIAIALSGGKDSVTLAFVLNKLYGFRS-DLEFFAITIDEGIAGYRPPTVEIA 100
Query: 76 SDLCQEQGIEHEIIYTQ--IAATINE--KRREKSSFCSFCSRLRRGTLYSKALEEGYNKV 131
+ ++ G+EH ++ + T++E KR +K C++C R+ L A E G K+
Sbjct: 101 RKVTEQLGMEHLVVSFEENFGMTLDEMVKRGDKKP-CTYCGVFRKYLLNRTAREMGATKL 159
Query: 132 AIAHHLDDAVESFFMNFTYNGSLRSMPPI--YRAENGLLV-IRPLIKVREASSIHFVTSQ 188
A H+LDD ++ +NF N + M + R + GL+V I+P V E + +
Sbjct: 160 ATGHNLDDETQTILLNF-LNADMERMARLVPQRVQEGLVVRIKPFRYVYEKEVVVYGFLH 218
Query: 189 NIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNV 240
+P+ D + P S P R A ++FL + +N +P S+ ++F +
Sbjct: 219 ELPMDFD-----ECPYSHFP--VRAAVRDFLYDFENKYPGRKFSVMSSFEKL 263
>ref|NP_126184.1| (NC_000868) hypothetical protein [Pyrococcus abyssi]
pir||H75166 hypothetical protein PAB2029 - Pyrococcus abyssi (strain Orsay)
emb|CAB49415.1| (AJ248284) hypothetical protein [Pyrococcus abyssi]
Length = 323
Score = 78.2 bits (191), Expect = 8e-14
Identities = 68/231 (29%), Positives = 110/231 (47%), Gaps = 25/231 (10%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL---- 68
V +T Y++I++G++I + +SGGKDS++L +LA+++K F F+ A+T+ G+
Sbjct: 34 VKRTIRKYRMIKKGERIGVAVSGGKDSVVLLHLLAKLRKR--FPFEIVAITIDEGIKGYR 91
Query: 69 GEDLKWLSDLCQEQGIEHEI--IYTQIAATINE------KRREKSSFCSFCSRLRRGTLY 120
+ ++ + G+EH I I T++E R E+ CS+C RR L
Sbjct: 92 DKSVEVAKRNAELLGVEHHIYRFKDYIGFTLDETVEIMGARGERLGACSYCGVWRRWLLN 151
Query: 121 SKALEEGYNKVAIAHHLDDAVESFFMNFTYN--GSLRSMPPIYRAENGLLV--IRPLIKV 176
A E +K+A+ +LDD V+ F MN L P Y + LV I+PL +V
Sbjct: 152 KAAEELKVDKLALGLNLDDEVQVFLMNLMRGDVARLGRTGPYYEVIHEGLVPRIKPLREV 211
Query: 177 REASSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHP 227
E + + NI V CP R +++L EM+ HP
Sbjct: 212 PEKEIVLYAVLNNIEVDLS-ECPYAVEA------FRAEIRDWLNEMEERHP 255
>ref|NP_562410.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB81200.1| (AP003190) conserved hypothetical protein [Clostridium perfringens]
Length = 277
Score = 77.4 bits (189), Expect = 1e-13
Identities = 57/207 (27%), Positives = 98/207 (46%), Gaps = 11/207 (5%)
Query: 42 LACILARMQKHAPFKFDFKAVTVHYGLGEDLK-WLSDLCQEQGIEHEIIYTQIAATINEK 100
+A + ++KH F+ + + G ++ L D C+ I I + I +++
Sbjct: 1 MAKLFQELKKHGQINFELVFLAMDPGYHPQIRELLEDNCKYLDIPVHIYDSGIFQVVDKI 60
Query: 101 RREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPI 160
++ C C+R+RRG+LY KA E G NK+A+ HH +D +E+ +N Y G+ ++M P
Sbjct: 61 AKDYP--CYMCARMRRGSLYGKAKELGCNKLALGHHFNDVIETTMLNVLYAGNFKTMLPK 118
Query: 161 YRAEN--GLLVIRPLIKVREASSIHFVTSQNI-PVAPDCNCPAKQPTSDKPPIARLATKN 217
+A N G+ +IRPL + E ++ I P+ C AK K R K+
Sbjct: 119 LKAANFDGIELIRPLYYIEEKYIKRWIQRAGIWPLNCACMVAAK-----KIGNKRFEIKD 173
Query: 218 FLKEMQNLHPRFFDSLENAFNNVQANS 244
++E + S+ A NV +S
Sbjct: 174 MIEEFKEKFDGVDKSIFRAAQNVSVDS 200
>ref|NP_296866.1| (NC_002620) conserved hypothetical protein [Chlamydia muridarum]
pir||A81698 conserved hypothetical protein TC0489 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39335.1| (AE002317) conserved hypothetical protein [Chlamydia muridarum]
Length = 259
Score = 76.3 bits (186), Expect = 3e-13
Identities = 62/232 (26%), Positives = 99/232 (41%), Gaps = 32/232 (13%)
Query: 7 KKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVH- 65
K+V ++ K TY ++E+ I + LSGGKDS+ L +L + F +T+H
Sbjct: 15 KRVESLIRKALYTYAMLEKHTHIAVALSGGKDSLSLLLMLKAISGRG-----FPELTIHA 69
Query: 66 ------YGLGEDLK--WLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRG 117
Y G + +LS +C + I+ +I +I ++ C CSR+RR
Sbjct: 70 IHIGGKYSCGAAVSGNYLSSICDK--IQVPLI------SIPSPYETENPECYTCSRIRRR 121
Query: 118 TLYSKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAEN-GLLVIRPLIKV 176
L+ A G VA HH DD +++ MN + M P+ N G+ ++RPLI +
Sbjct: 122 LLFDAAKSVGATAVAFGHHRDDVIQTALMNLLHKAEFAGMLPVVDMVNFGITILRPLIFI 181
Query: 177 REASSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPR 228
E F C CP R T+ LK ++ + P+
Sbjct: 182 PEELIRKFAKESGF-ARITCRCPVIS--------LRTKTEEALKTLETIFPQ 224
>ref|NP_602768.1| (NC_003454) Cell cycle protein MesJ [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gb|AAL94067.1| (AE010500) Cell cycle protein MesJ [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 448
Score = 74.3 bits (181), Expect = 1e-12
Identities = 65/245 (26%), Positives = 106/245 (42%), Gaps = 15/245 (6%)
Query: 15 KTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYG---LGED 71
K N Y LIE D I++G SGG DS+ L +L ++Q + F+FK VH GED
Sbjct: 9 KLNKKYNLIENNDTIVVGFSGGPDSVFLVEMLKKLQ----YFFNFKIYLVHINHLLRGED 64
Query: 72 LKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEE-GYNK 130
+ E ++ + + E +E R R +S+ E+ G NK
Sbjct: 65 ADSDENFSFEYAKKNNLEIFIKRIPVKEIAKEVGKTLEEVGREERYKFFSEIYEKVGANK 124
Query: 131 VAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHFVTSQNI 190
+A AH+ DD +E+F SL+ + I N +IRP+ ++ + + ++ I
Sbjct: 125 IATAHNKDDQIETFLFRLIRGTSLQGLEGIKIKNNN--IIRPISEIYKKDILEYLNKNEI 182
Query: 191 PVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNL--HPRFFDSLENAFNNVQANSFSDA 248
D + T + RL F++E N+ + F +E N Q NS + +
Sbjct: 183 QYKIDKTNFENEFTRNS---IRLNLIPFIEERYNIKFKDKIFSLIEEIRENNQNNSLNLS 239
Query: 249 KYLDA 253
Y D+
Sbjct: 240 NYTDS 244
>ref|NP_219721.1| (NC_000117) PP-Loop Superfamily ATPase [Chlamydia trachomatis]
pir||H71542 probable p-loop ATPase - Chlamydia trachomatis (serotype D, strain
UW3/Cx)
gb|AAC67809.1| (AE001295) PP-Loop Superfamily ATPase [Chlamydia trachomatis]
Length = 234
Score = 70.5 bits (171), Expect = 2e-11
Identities = 59/220 (26%), Positives = 94/220 (41%), Gaps = 32/220 (14%)
Query: 19 TYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVH-------YGLGED 71
T+ ++++ +I + LSGGKDS+ L +L + F +T+H Y G
Sbjct: 7 THAMLQKHTRIAVALSGGKDSLSLLLMLKAISGRG-----FPELTIHAIHIGGKYSCGAA 61
Query: 72 LK--WLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYN 129
+ +LS +C + I+ +I +I ++ C CSR+RR L+ A G
Sbjct: 62 VSGNYLSSICDK--IQVPLI------SIPSPYETENPECYTCSRIRRRLLFDTAKAVGAT 113
Query: 130 KVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAEN-GLLVIRPLIKVREASSIHFVTSQ 188
VA HH DD V++ MN + M PI N G+ ++RPLI + E F
Sbjct: 114 AVAFGHHRDDVVQTTLMNLLHKAEFAGMLPIVDMVNFGITILRPLIFIPEDLIRKFAKES 173
Query: 189 NIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPR 228
C CP R T+ LK ++ + P+
Sbjct: 174 GF-ARITCRCPVIS--------LRTKTEEALKTLETIFPQ 204
>ref|NP_224466.1| (NC_000922) PP-Loop Superfamily ATPase [Chlamydophila pneumoniae
CWL029]
ref|NP_300320.1| (NC_002491) PP-loop superfamily ATPase [Chlamydophila pneumoniae
J138]
ref|NP_445047.1| (NC_002179) conserved hypothetical protein [Chlamydophila
pneumoniae AR39]
pir||E72099 conserved hypothetical protein CP0500 [imported] - Chlamydophila
pneumoniae (strains CWL029 and AR39)
gb|AAD18410.1| (AE001611) PP-Loop Superfamily ATPase [Chlamydophila pneumoniae
CWL029]
gb|AAF38329.1| (AE002211) conserved hypothetical protein [Chlamydophila pneumoniae
AR39]
dbj|BAA98471.1| (AP002545) PP-loop superfamily ATPase [Chlamydophila pneumoniae
J138]
Length = 244
Score = 70.5 bits (171), Expect = 2e-11
Identities = 55/198 (27%), Positives = 87/198 (43%), Gaps = 14/198 (7%)
Query: 7 KKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTV-- 64
K++ +V K T+ ++ KI++ LSGGKDS+ L +L + D AV +
Sbjct: 15 KRIESLVRKALYTHTMLANHRKIVVALSGGKDSLTLLLMLKAISGRGFPDLDLHAVNIGG 74
Query: 65 HYGLGEDLK--WLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSK 122
Y G ++ +L+ +C + I I + A E C CS+ RR L+
Sbjct: 75 KYSCGAEVNKPYLTRICDQLCIPFRTIPSPYAPETPE--------CYPCSQARRRLLFQA 126
Query: 123 ALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIY-RAENGLLVIRPLIKVREASS 181
A E G + +A HH DD V++ +N + M P+ G+ ++RPLI E
Sbjct: 127 AKEIGASAIAFGHHRDDLVQTALLNLLHKAEFAGMLPVLDMVHFGVTILRPLIFTPE-FW 185
Query: 182 IHFVTSQNIPVAPDCNCP 199
I +N C CP
Sbjct: 186 IRKFAKENGFARVTCRCP 203
>ref|NP_248152.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58558|YB57_METJA Hypothetical protein MJ1157
pir||E64444 hypothetical protein MJ1157 - Methanococcus jannaschii
gb|AAB99161.1| (U67558) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 341
Score = 68.9 bits (167), Expect = 5e-11
Identities = 49/171 (28%), Positives = 89/171 (51%), Gaps = 28/171 (16%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
+I ++ ++GK +I KI +G+SGGKDS+++A IL + KH P A
Sbjct: 65 DIERRAKKVLGKD-----IIRNNVKIGIGISGGKDSLVMAYILKELFKHIP-----NAKL 114
Query: 64 VHYGLGEDLK--------WLSDLCQEQGIEHEIIY--TQIAATINE-------KRREKSS 106
+ + + E +K ++ + C+E ++ +II +I T++E +
Sbjct: 115 ICFFVDEGIKGFRNIAEKYVKEFCKEYNLDLKIIKFEDEIGYTLDEIVKNDYLSKLNIGK 174
Query: 107 FCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSM 157
CSFC +RR L AL+EG + +AI H+LDD ++ MN+ G+++++
Sbjct: 175 PCSFCGVVRRYLLNKHALKEGCDYLAIGHNLDDFCQTILMNYV-EGNIKNI 224
>ref|NP_376519.1| (NC_003106) 318aa long hypothetical veg136 protein [Sulfolobus
tokodaii]
dbj|BAB65628.1| (AP000983) 318aa long hypothetical veg136 protein [Sulfolobus
tokodaii]
Length = 318
Score = 63.9 bits (154), Expect = 2e-09
Identities = 66/240 (27%), Positives = 110/240 (45%), Gaps = 27/240 (11%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDL-KWLSDL 78
YK+ E KI + +SGGKDS L ++ ++ + K F+ + ++ LG D+ K S
Sbjct: 41 YKMFENSKKIAVAVSGGKDSTTLLHLMKKLSE----KKGFEIIGINIDLGIDMGKQYSSK 96
Query: 79 CQE--------QGIEHEI--IYTQIAATINE-KRREKSSFCSFCSRLRRGTLYSKALEEG 127
E G+++ I I + TI++ K + K CS C ++R TL A EEG
Sbjct: 97 STEFALKNFEMLGVKYRIVRIKERYGFTIDDAKHKIKRPVCSTCGLVKRYTLTEIAEEEG 156
Query: 128 YNKVAIAHHLDDAVESFFMNFTYNGSLRSMPP---IYRAENGLLV--IRPLIKVREASSI 182
+ + H+L+D + F M +NG +R + I E G V ++PL + E +
Sbjct: 157 ADTIVTGHNLNDMAQ-FIMAGYFNGDVRDLARLDIITPPEKGYKVTKVKPLFLIYEKEIL 215
Query: 183 HFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSL-ENAFNNVQ 241
+ + IP D +CP T + + L+E++ P + L EN N +Q
Sbjct: 216 TYALVKGIPFLYD-SCP---HTFRVGGATQDTIRRKLEELEEAIPGYMLMLVENFINKIQ 271
>ref|NP_623930.1| (NC_003869) predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Thermoanaerobacter tengcongensis]
gb|AAM25534.1| (AE013181) predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Thermoanaerobacter tengcongensis]
Length = 467
Score = 62.8 bits (151), Expect = 3e-09
Identities = 55/197 (27%), Positives = 95/197 (47%), Gaps = 32/197 (16%)
Query: 7 KKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHY 66
+KVL + K Y +IE+ DKI++G+SGG DS+ + +L ++ KF+ K VH
Sbjct: 12 EKVLRTIEK----YNMIEKDDKIVMGISGGPDSLCMLDVLFNLKG----KFNLKLYVVHV 63
Query: 67 G---LGEDLK----WLSDLCQEQGI-----EHEIIYTQIAATINEKRREKSSFCSFCSRL 114
GED K ++ LC++ + E I Y ++E++ R
Sbjct: 64 NHMIRGEDAKKDAEFVEKLCKDLDLPFFLFEENIPYLAKKMGLSEEQ---------AGRY 114
Query: 115 RRGTLYSKALEE-GYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPL 173
R + + L+ G NK+A+AH+ +D E+ +N LR + I + NG +IRPL
Sbjct: 115 VRYKAFEETLKRVGGNKIAVAHNKNDVAETVLLNILRGTGLRGLIGI-KPVNG-NIIRPL 172
Query: 174 IKVREASSIHFVTSQNI 190
I++ ++ +N+
Sbjct: 173 IEIERREIEKYLKDKNL 189
>ref|NP_560888.1| (NC_003364) conserved hypothetical protein [Pyrobaculum aerophilum]
gb|AAL65070.1| (AE009943) conserved hypothetical protein [Pyrobaculum aerophilum]
Length = 298
Score = 60.8 bits (146), Expect = 1e-08
Identities = 49/191 (25%), Positives = 77/191 (39%), Gaps = 7/191 (3%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGED- 71
V T Y+L+E GD I + +SGGKDS +L A + KA+ ++ G
Sbjct: 22 VFSTIRRYRLVEMGDVIYVAVSGGKDSCAALALLKEYVDSAKIDAEVKALHINLGFKTSD 81
Query: 72 --LKWLSDLCQEQGIEHEIIYTQIAATINEKRREKS-SFCSFCSRLRRGTLYSKALEEGY 128
+ + L G+ +++ + I R CS C ++R L E G
Sbjct: 82 RVEEAVKTLANRLGVSLHVVHAKDYLDIEAAARATGRPICSVCGAVKRYLLNKVPRELGA 141
Query: 129 NKVAIAHHLDDAVESFFMNFT---YNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHFV 185
KVA HH D + +F N + + + +P + L IRPLI R +
Sbjct: 142 TKVATGHHAHDFLAYYFKNLAGRHFEWNFKILPRLDGQGLILTRIRPLIFARPEENEELC 201
Query: 186 TSQNIPVAPDC 196
S +P + C
Sbjct: 202 RSLGLPFSEVC 212
>ref|NP_634820.1| (NC_003901) conserved protein [Methanosarcina mazei Goe1]
gb|AAM32492.1| (AE013528) conserved protein [Methanosarcina mazei Goe1]
Length = 302
Score = 60.5 bits (145), Expect = 2e-08
Identities = 53/184 (28%), Positives = 89/184 (47%), Gaps = 19/184 (10%)
Query: 23 IEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWLSDL 78
I++ D I + LSGGKDS + I+ ++ P A++V G+ + L+ L
Sbjct: 46 IKKNDVIAVALSGGKDSSVALYIMHKILGDRP-DIQIVAISVDEGIHGYRPQSLELAKQL 104
Query: 79 CQEQGIEHEI--IYTQIAATINEKR---REKSSFCSFCSRLRRGTLYSKALEEGYNKVAI 133
+ G+ H I + AT++E REK + CS+C LR+ L A+E G K+
Sbjct: 105 TEALGVRHIIKSFKDEHGATMDELAVMDREKGT-CSYCGVLRKSILNRVAIEIGATKLVT 163
Query: 134 AHHLDDAVESFFMNFTYNGSLRSM----PPIYRAENGLLV-IRPLIKVREASSIHFVTSQ 188
H+LDD ++ +N + G + M PP+ A GL++ +PL + E +
Sbjct: 164 GHNLDDEAQTILLNH-FRGDMERMVRLAPPV--AVEGLVMRAKPLRNIPEKEVALYALVN 220
Query: 189 NIPV 192
++PV
Sbjct: 221 SLPV 224
>ref|NP_614386.1| (NC_003551) Predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Methanopyrus kandleri AV19]
gb|AAM02316.1| (AE010399) Predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Methanopyrus kandleri AV19]
Length = 303
Score = 59.7 bits (143), Expect = 3e-08
Identities = 55/214 (25%), Positives = 94/214 (43%), Gaps = 23/214 (10%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWL 75
++ G +I++ LSGGKDS + ++ + P + + A+TV G+ L+
Sbjct: 42 WRWFRPGQRIVVALSGGKDSSLALRLVTEYVEPLP-EVEVIALTVDEGISGFRDACLRAA 100
Query: 76 SDLCQEQGIEHEIIY--TQIAATINEKRREKS-SFCSFCSRLRRGTLYSKALEEGYNKVA 132
+ E +EHE++ + + E + S C+ C LRR L +A E G + V
Sbjct: 101 ERVADELDVEHEVVSFEEEYGFALEEVVEDVDVSACTLCGVLRRRLLNRRARELGADVVV 160
Query: 133 IAHHLDDAVESFFMNFTYN--GSLRSMPPIYRAENGLLV--IRPLIKVREASSIHFVTSQ 188
H+LDD ++ MNF L + P R E+ L+V ++PL V E
Sbjct: 161 TGHNLDDEAQAALMNFVKADLAQLARLHPEVRPEDDLIVPRVKPLRGVPEREVRWVAEEL 220
Query: 189 NIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEM 222
+P +D P AR + ++F +E+
Sbjct: 221 GLPF-----------HADPCPYARFSVRSFFREI 243
>ref|NP_127340.1| (NC_000868) hypothetical protein [Pyrococcus abyssi]
pir||D75016 hypothetical protein PAB1092 - Pyrococcus abyssi (strain Orsay)
emb|CAB50570.1| (AJ248288) hypothetical protein [Pyrococcus abyssi]
Length = 303
Score = 59.7 bits (143), Expect = 3e-08
Identities = 54/229 (23%), Positives = 104/229 (44%), Gaps = 33/229 (14%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDL 72
V +T YKL+++ +KIL+ +SGGKDS + A +L ++ ++ + + ++ G+GE
Sbjct: 34 VQRTIEKYKLLKKDEKILVAVSGGKDSAVTAYVLNKL------GYNIECLHINLGIGEYS 87
Query: 73 K----WLSDLCQEQGIEHEIIYTQ--IAATINEKRREKSSFCSFCSRLRRGTLYSKALEE 126
K + C+ G I+ + + I E + + + CS+C +R + A +
Sbjct: 88 KKSEEYAKKQCELIGAPLHIVRIKEILGYGIGEVKTRRPT-CSYCGLTKRYIMNKFAYDN 146
Query: 127 GYNKVAIAHHLDDAVESFFMNFTYNGS--LRSMPPIYRAENGLL-VIRPLIKVREASSIH 183
G++ +A H+LDD N Y + + P+ AE + ++PL ++ E +
Sbjct: 147 GFDAIATGHNLDDEASFLLNNLLYWNTEYIAKGGPLLPAEGKFVKKVKPLYELTEREVVA 206
Query: 184 FVTSQNIP-VAPDCNCPAKQPTSDKPPIARLAT----KNFLKEMQNLHP 227
+ + + + +C P AR AT K L E++ P
Sbjct: 207 YALAVGLEYIVEEC------------PYARGATTLDMKAVLNELEEKRP 243
>ref|NP_147309.1| (NC_000854) hypothetical protein [Aeropyrum pernix]
pir||H72637 hypothetical protein APE0537 - Aeropyrum pernix (strain K1)
dbj|BAA79504.1| (AP000060) 324aa long hypothetical protein [Aeropyrum pernix]
Length = 324
Score = 59.3 bits (142), Expect = 4e-08
Identities = 57/196 (29%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 22 LIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVH---YGLGEDLKWLSDL 78
+I G+ +LLGLSGGKDS +L L+ + P + ++ Y D++ + +
Sbjct: 33 MIGPGETVLLGLSGGKDSYVLLDALSEIV--GPSRLVAVSIVEGIPGYNREGDIEKIRRV 90
Query: 79 CQEQGIEHEIIYTQIAATINEKRREKSS----------FCSFCSRLRRGTLYSKALEEGY 128
+G++ +I T I + E S C++C RR L A G
Sbjct: 91 AAARGVD--VIVTSIREYVGASLYEIYSRARGRGAGHAACTYCGISRRRILALYARLYGA 148
Query: 129 NKVAIAHHLDDAVESFFMNF---TYNGSLRSMPPIYRAENGLLV--IRPLIKVREASSIH 183
+KVA AH+LDD ++ +NF + G L++ P+YR+ LV I+PL KV E +
Sbjct: 149 HKVATAHNLDDEAQTAIVNFLRGDWVGMLKT-HPLYRSGGEDLVPRIKPLRKVYEWETAS 207
Query: 184 FVTSQNIPVAPDCNCP 199
+V P+ + CP
Sbjct: 208 YVVLHRYPI-QEAECP 222
>ref|NP_276314.1| (NC_000916) conserved protein [Methanothermobacter
thermautotrophicus] [Methanothermobacter
thermautotrophicus str. Delta H]
pir||B69025 conserved hypothetical protein MTH1186 - Methanobacterium
thermoautotrophicum (strain Delta H)
gb|AAB85675.1| (AE000887) conserved protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 278
Score = 59.3 bits (142), Expect = 4e-08
Identities = 62/233 (26%), Positives = 106/233 (44%), Gaps = 25/233 (10%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWL 75
++LI+ G+ I + LSGGKDS++ L+ ++ + F+ A+TV G+G E +
Sbjct: 21 HELIKPGEHIAVALSGGKDSVLTLHALSDLR--SDLDFELTAITVDEGIGGYRSEGVMVA 78
Query: 76 SDLCQEQGIE--HEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAI 133
+ + G+E + ++ SS C C RR L A E G +K+A
Sbjct: 79 RENAELLGVELIERSFRDEFNFELDSVTDRFSSPCIPCGVFRRWILNRTAREIGASKIAT 138
Query: 134 AHHLDDAVESFFMNFTYNGSLRSM----PPIYRAENGLLV-IRPLIKVREASSIHFVTSQ 188
H++DD ++SF M+ G +R P + R ++ I+PL E+ +
Sbjct: 139 GHNMDDEIQSFIMSLA-RGDVRKFSKFGPELQRIHPAMVPRIKPLWSTPESEVRLWAVLN 197
Query: 189 NIPVAPDCNCPAKQPTSDKPPIARLATKNFL----KEMQNLHPRFFDSLENAF 237
++ V D +C P SD +R+ ++FL E Q + R +SL F
Sbjct: 198 DVKVHLD-SC----PYSDLSMRSRI--RDFLNHLESEKQGVKLRVMESLSRTF 243
>ref|NP_248483.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58873|YE78_METJA Hypothetical protein MJ1478
pir||E64484 hypothetical protein MJ1478 - Methanococcus jannaschii
gb|AAB99482.1| (U67588) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 303
Score = 59.3 bits (142), Expect = 4e-08
Identities = 48/190 (25%), Positives = 84/190 (43%), Gaps = 22/190 (11%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG--- 69
V K+ YK++ + +KIL+ +SGGKD A +L K + H LG
Sbjct: 38 VKKSIDKYKMLSKDEKILVAVSGGKDGHAAAWVLK--------KLGYNIELFHINLGIEG 89
Query: 70 ---EDLKWLSDLCQEQGIE-HEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALE 125
E LK + +L ++ + H + I E R K CS C +R + E
Sbjct: 90 FSEESLKAVKELAEKLEVPLHVVNLKDITGKTMEDIRGKK--CSICGTTKRYLMNKFGYE 147
Query: 126 EGYNKVAIAHHLDDAVESFFMNFTYNGSLRSM----PPIYRAENGLLVIRPLIKVREASS 181
G++ + H+LDD V SF +N +N ++R + P + + L ++ ++ E
Sbjct: 148 NGFDVIVTGHNLDDEV-SFILNNLFNWNIRYLAKHEPVLPAHDKFLKKVKIFFEIEEELI 206
Query: 182 IHFVTSQNIP 191
+ + ++ IP
Sbjct: 207 LKYAEAEEIP 216
>ref|NP_342110.1| (NC_002754) Conserved hypothetical protein [Sulfolobus
solfataricus]
emb|CAB57713.1| (Y18930) hypothetical protein [Sulfolobus solfataricus]
gb|AAK40900.1| (AE006688) Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 323
Score = 58.9 bits (141), Expect = 5e-08
Identities = 53/218 (24%), Positives = 99/218 (45%), Gaps = 18/218 (8%)
Query: 23 IEEGDKILLGLSGGKDSIMLACILAR-MQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQE 81
I +KILL +SGGKDS++LA L++ + F+ Y E +K L + ++
Sbjct: 44 IVNSNKILLAVSGGKDSLVLADTLSQFIHPSRLIAFNINEGIKGYNRNEYVKKLEEYLKD 103
Query: 82 QGIE--HEIIYTQIAATINE------KRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAI 133
GIE ++ +++E K++ S C+FC RR + ++ + VA
Sbjct: 104 LGIELIKSGFKEEVGFSLDEMLEASLKKKLNVSACTFCGGFRRKLINEAGIKVAADYVAT 163
Query: 134 AHHLDDAVESFFMNFTYNGSLRSM----PPIYRAENGLLVIRPLIKVREASSIHFVTSQN 189
H+LDD V++ +N LR + P+ + ++ ++PL K+ E + + +
Sbjct: 164 GHNLDDEVQTIVINLIRGDLLRLIRFGDKPLMVSSKFVMRVKPLRKIYEWETTMYAHLKG 223
Query: 190 IPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHP 227
+ CP S KP + R ++ L +++ P
Sbjct: 224 FEF-QETECPY---ISQKPTL-RAKVRDLLYKLEEKKP 256
>ref|NP_578002.1| (NC_003413) n-type ATP pyrophosphatase superfamily [Pyrococcus
furiosus DSM 3638]
gb|AAL80397.1| (AE010151) n-type ATP pyrophosphatase superfamily [Pyrococcus
furiosus DSM 3638]
Length = 283
Score = 58.9 bits (141), Expect = 5e-08
Identities = 59/228 (25%), Positives = 103/228 (44%), Gaps = 41/228 (17%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDL 72
V +T YKL + ++IL+ +SGGKDS + A +L ++ + + + ++ G+GE
Sbjct: 16 VARTIEKYKLASKDERILVAVSGGKDSAVTAYVLKKL------GYKIECLHLNLGIGEYS 69
Query: 73 K----WLSDLCQEQGIEHEIIYTQ--IAATINEKRREKSSFCSFCSRLRRGTLYSKALEE 126
+ + C+ G II + + I E R + + CS+C +R + A +
Sbjct: 70 EKSEIYAKKQCEFIGAPLNIIRVKELLGYGIGEVRTSRPT-CSYCGLTKRYIMNKFAYDN 128
Query: 127 GYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLV---------IRPLIKVR 177
G++ VA H+LDD SF MN +L Y A+ G L+ I+PL ++
Sbjct: 129 GFDAVATGHNLDDEA-SFLMN-----NLLHWNTEYLAKGGPLLPGEGKFVKKIKPLYELT 182
Query: 178 EASSIHFVTSQNIP-VAPDCNCPAKQPTSDKPPIARLATKNFLKEMQN 224
E + + + + + +C P AR AT +KE+ N
Sbjct: 183 EREVVAYAIAVGLEYIVEEC------------PYARGATTLDMKEVLN 218
>ref|NP_616897.1| (NC_003552) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM05377.1| (AE010881) conserved hypothetical protein [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Length = 302
Score = 58.2 bits (139), Expect = 9e-08
Identities = 50/182 (27%), Positives = 84/182 (45%), Gaps = 15/182 (8%)
Query: 23 IEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWLSDL 78
I++ D I + LSGGKDS + ++ ++ + P AV++ G+ L+ L
Sbjct: 46 IKKNDVIAVALSGGKDSSVALYVMHKILGNRP-DIQIVAVSIDEGIHGYRPHSLELAKKL 104
Query: 79 CQEQGIEHEI--IYTQIAATINEKR---REKSSFCSFCSRLRRGTLYSKALEEGYNKVAI 133
+ G+ H I + T++E REK + CS+C LR+ L ALE G K+
Sbjct: 105 TETLGVRHIIKSFKDEHGVTMDELAAMDREKGT-CSYCGVLRKSILNRVALEIGATKLVT 163
Query: 134 AHHLDDAVESFFMNFTYNGSLRSM---PPIYRAENGLLVIRPLIKVREASSIHFVTSQNI 190
H+LDD ++ +N + G + M P E +L +PL + E + ++
Sbjct: 164 GHNLDDEAQTILLNH-FRGDMERMVRLAPPAAVEGLVLRAKPLRNIPEKEVALYALINSL 222
Query: 191 PV 192
PV
Sbjct: 223 PV 224
>ref|NP_038397.1| (NC_002186) hypothetical chloroplast RF62 [Mesostigma viride]
sp|Q9MUR3|YC62_MESVI Hypothetical 36.8 kDa protein YCF62 (RF62)
gb|AAF43838.1|AF166114_50 (AF166114) hypothetical chloroplast RF62 [Mesostigma viride]
Length = 310
Score = 57.4 bits (137), Expect = 1e-07
Identities = 45/183 (24%), Positives = 79/183 (42%), Gaps = 19/183 (10%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLK----WL 75
+ L+++ D+IL+ SGG+DSI L IL +Q + +D V + + + +
Sbjct: 15 HNLLKKNDRILIAASGGQDSISLIKILVELQPQ--WNWDLGIVNCDHSWNQSSRKGSSQI 72
Query: 76 SDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAH 135
+ + Q I+ I T EK RE R + A YN + AH
Sbjct: 73 AQIAQLLNIDFYQIVTCHQLINEEKARE----------WRYQKIEDIAFSNKYNVIVTAH 122
Query: 136 HLDDAVESFFMNFTYNGSLRSMPPIY---RAENGLLVIRPLIKVREASSIHFVTSQNIPV 192
+ D +E+FF N S+ + + +G+ ++RPL+ +FV ++P+
Sbjct: 123 NASDRIETFFFNLLRGTSITGVQSLLWTRSLSSGINIVRPLLNTTRFELKNFVKEIHLPL 182
Query: 193 APD 195
PD
Sbjct: 183 WPD 185
>ref|NP_284094.1| (NC_003116) hypothetical protein NMA1350 [Neisseria meningitidis
Z2491]
pir||A81904 hypothetical protein NMA1350 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84597.1| (AL162755) hypothetical protein NMA1350 [Neisseria meningitidis
Z2491]
Length = 426
Score = 57.4 bits (137), Expect = 1e-07
Identities = 57/225 (25%), Positives = 93/225 (41%), Gaps = 31/225 (13%)
Query: 26 GDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQEQ--- 82
G K + LSGG DS++L +L R K F D A+ +H+GL +D CQ
Sbjct: 11 GKKTAVALSGGLDSVVLLHLLVRAGKKGGFIPD--ALHIHHGLSPRADDWADFCQNYCDM 68
Query: 83 -GIEHEIIYTQIAATINEKRREKSSF-CSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDA 140
G+ E + + EK+ +R +R Y+ E+G++ +A+AHH DD
Sbjct: 69 LGVGLETVKVCV---------EKNGLGIEAAARQKR---YAAFAEKGFDVLALAHHRDDQ 116
Query: 141 VESFFMNFTYNGSLR---SMPPIYRAENGLLVIRPLIKVREASSIHFVTSQNIPVAPDCN 197
+E+F + G LR +MP + ++ RPL+ + +P D
Sbjct: 117 IETFMLAVARGGGLRALAAMPAVRPFGEKGIIWRPLLPFSRQDIWDYAQKHGLPNIED-- 174
Query: 198 CPAKQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNVQA 242
+ +D + L E+ P F + NNV+A
Sbjct: 175 ----ESNTDTAYLRNRFRHRILPELSAQIPHFG---RHVLNNVRA 212
>ref|NP_559910.1| (NC_003364) conserved hypothetical protein [Pyrobaculum aerophilum]
gb|AAL64092.1| (AE009868) conserved hypothetical protein [Pyrobaculum aerophilum]
Length = 324
Score = 56.2 bits (134), Expect = 3e-07
Identities = 54/208 (25%), Positives = 93/208 (43%), Gaps = 23/208 (11%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPF-KFDFKAVTVHYGLGED 71
V +T + KLI GD + + +SGGKDS++L IL R+++ +A T++ G
Sbjct: 36 VVETIRSEKLIVPGDYVAIAVSGGKDSLVLLYILGRLKERGTLGGVKMEAFTINEGHPYS 95
Query: 72 L-------KWLSDLCQEQGIEHEI-----IYTQIAATINE---KRREKSSFCSFCSRLRR 116
++ DL + GIE+ + I+ A ++E K + C+ LRR
Sbjct: 96 CFYRMSRRDYVRDLASKFGIEYNVYHFKDIFGVTAMELSERLAKAGHEVHMCTIDGVLRR 155
Query: 117 GTLYSKALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENG-----LLVIR 171
+ G+ K+A AH+LDD ++ +N G+L R E+ + I+
Sbjct: 156 RAMNIIGKARGWTKIATAHNLDDEAQTVMLN-VLMGNLSRFSWYGRYEDAEEKDLIPRIK 214
Query: 172 PLIKVREASSIHFVTSQNIPVAPDCNCP 199
PL +RE + +P+ + CP
Sbjct: 215 PLKYIREEEIALYAYYHGLPLM-ELECP 241
>ref|NP_148374.1| (NC_000854) hypothetical protein [Aeropyrum pernix]
pir||A72514 hypothetical protein APE2086 - Aeropyrum pernix (strain K1)
dbj|BAA81097.1| (AP000063) 331aa long hypothetical protein [Aeropyrum pernix]
Length = 331
Score = 55.8 bits (133), Expect = 4e-07
Identities = 51/196 (26%), Positives = 92/196 (46%), Gaps = 24/196 (12%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLC 79
++L+ +GD++L +SGGKDS L +L+R+ + F A+ +H G+ E S+
Sbjct: 42 HRLVGKGDRVLAAVSGGKDSSTLLAVLSRLSRR--IGFHVVALYIHLGIYE----YSEKS 95
Query: 80 QEQGIE--HEIIYTQIAATINE---------KRREKSSFCSFCSRLRRGTLYSKALEEGY 128
+E I ++ I +NE + K CS C ++R + + A+E G
Sbjct: 96 REASIRLASQLDVPLIVFDLNEVLGAGIPELAKASKRPPCSVCGMVKRYVINAAAVELGV 155
Query: 129 NKVAIAHHLDDAVESFFMNFTYNGSLRSMPPI-YRAEN--GLLV--IRPLIKVREASSIH 183
+ VA+ H+ DD + + + N L ++ + + E+ G+ V +RPL V E S
Sbjct: 156 DAVALGHNADD-IAVYNLKSFLNQDLEAISKLGVKTESIPGVAVGRVRPLYYVYEKESFL 214
Query: 184 FVTSQNIPVAPDCNCP 199
+ +P + CP
Sbjct: 215 YSLLAGLPFLHE-ECP 229
>ref|NP_621776.1| (NC_003869) predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Thermoanaerobacter tengcongensis]
gb|AAM23380.1| (AE012981) predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Thermoanaerobacter tengcongensis]
Length = 301
Score = 55.1 bits (131), Expect = 7e-07
Identities = 47/193 (24%), Positives = 81/193 (41%), Gaps = 6/193 (3%)
Query: 10 LHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG 69
L V KT YK++ ++++ +SGGKDS++ A +L R+ F +T +
Sbjct: 31 LRQVSKTIEKYKMLPPKGRVVVAISGGKDSLVTAYVLKRLGYEVLGFFVDLGITQNDFSP 90
Query: 70 EDLKWLSDLCQEQGIEHEII--YTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEG 127
+ + + C+E I EI+ + I E + + C+ C +R + AL
Sbjct: 91 RSREVVENFCKEHDIPLEIVDLKERYGKDIPEVAKRQDRICAICGVTKRHLMNEYALSVN 150
Query: 128 YNKVAIAHHLDDAVE---SFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHF 184
+ +A H LDD + + M + + + +P + I+PL E I F
Sbjct: 151 ADALATGHTLDDMAKLLLANLMRWDLHHLAKGVPTLPAEPGFAKKIKPLAFQSEDEIIAF 210
Query: 185 VTSQNI-PVAPDC 196
NI PV C
Sbjct: 211 AKLHNIKPVEAKC 223
>ref|NP_597632.1| (NC_003230) similarity to HYPOTHETICAL PROTEIN YGW1_yeast
[Encephalitozoon cuniculi]
emb|CAD26267.1| (AL590443) similarity to HYPOTHETICAL PROTEIN YGW1_yeast
[Encephalitozoon cuniculi]
Length = 317
Score = 55.1 bits (131), Expect = 7e-07
Identities = 38/143 (26%), Positives = 74/143 (51%), Gaps = 8/143 (5%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL-GED 71
V +T + ++GD+I +G+SGGKDS +LA +L + + + + ++V G+ G
Sbjct: 35 VHETIVASGMFQKGDRIGIGVSGGKDSTVLAYVLDLLNRKHGYGVELVLLSVDEGIVGYR 94
Query: 72 LKWLSDLC---QEQGIEHEIIYTQ--IAATINE--KRREKSSFCSFCSRLRRGTLYSKAL 124
+ + +C ++ GI+ I+ + T++ ++ + S C++C RR L A
Sbjct: 95 DQSIESVCRNSKDLGIKLRIVSFEDVFGVTMDRVVQKIGRRSNCTYCGVFRRQALEKAAR 154
Query: 125 EEGYNKVAIAHHLDDAVESFFMN 147
E G + +A H+ DD E+ +N
Sbjct: 155 EMGVDAIATGHNADDMAETVLLN 177
>ref|NP_614337.1| (NC_003551) Predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Methanopyrus kandleri AV19]
gb|AAM02267.1| (AE010394) Predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Methanopyrus kandleri AV19]
Length = 310
Score = 54.3 bits (129), Expect = 1e-06
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 23/212 (10%)
Query: 11 HIVGKTNATYKLIEE--GDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL 68
++ G K +E GD + +G SGGKDS C LA + + K VTV +
Sbjct: 58 NVAGLLKIVQKAFDEPKGD-LAIGFSGGKDSF--TCALALEPFLREWDVNPKLVTVDVRV 114
Query: 69 GEDLKW------LSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSK 122
W L + + G E E++ + + K C CS +RR +
Sbjct: 115 RGVEVWRPYRKELDRMAKALGYEFELVRAEEDVAEPSEELNKPP-CKICSAIRR-----R 168
Query: 123 ALEEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPI-YRAENGLLVIRPLI---KVRE 178
L E ++ V H +DA+E+ M+ + PP E+ L++RPL ++R
Sbjct: 169 ILAERHDVVVYGHTAEDAIETLLMSVNRRRDAGTFPPADLLEEDDALLLRPLYVVSELRT 228
Query: 179 ASSIHFVTSQ-NIP-VAPDCNCPAKQPTSDKP 208
A H VTS+ +P V P+C + SD P
Sbjct: 229 ARVYHEVTSRLGLPKVEPECPYAKRYRNSDSP 260
>ref|NP_247461.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q57909|Y485_METJA Hypothetical protein MJ0485
pir||E64360 hypothetical protein MJ0485 - Methanococcus jannaschii
gb|AAB98476.1| (U67498) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 337
Score = 54.3 bits (129), Expect = 1e-06
Identities = 58/231 (25%), Positives = 95/231 (41%), Gaps = 39/231 (16%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG--- 69
VG+ +K+I D +++GLSGGKDS++L +L ++ K AVTV +G
Sbjct: 64 VGRFINKHKIIAPRDIVIVGLSGGKDSLLLLHLLEVYRRKYGIK--LIAVTVDVNIGGIR 121
Query: 70 ------EDLKWLSDLCQEQGIEHEIIYTQI----AATINEKRREKSSF--CSFCSRLRRG 117
E +K + C+ + H I+ + + I K + F C CS ++R
Sbjct: 122 PWKEDTEGVKLIKHHCEMLNVPHIILKNDLDVVELSEILTKHSKGMEFSPCFSCSVIKRH 181
Query: 118 TLYSKALEEGYN--------KVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAE----- 164
L A E N K+A H+LDD ++ N L+ M P+ R +
Sbjct: 182 LLGKLAKEIAENENIPYEKVKLAYGHNLDDNSDTILANIFKGERLKFMRPLTRFKYNEVD 241
Query: 165 --------NGLLVIRPLIKVREASSIHFVTSQNIPVAPDCN-CPAKQPTSD 206
++IRP++ + E I + I D + CP + D
Sbjct: 242 YQSFKIPLEECIIIRPMLPILERDIIKALEECGIEYYKDKDMCPYSRDRGD 292
>ref|NP_377416.1| (NC_003106) 322aa long hypothetical veg136 protein [Sulfolobus
tokodaii]
dbj|BAB66525.1| (AP000986) 322aa long hypothetical veg136 protein [Sulfolobus
tokodaii]
Length = 322
Score = 54.3 bits (129), Expect = 1e-06
Identities = 45/169 (26%), Positives = 75/169 (43%), Gaps = 13/169 (7%)
Query: 23 IEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVH-YGLGEDLKWLSDLCQE 81
+++ KILL +SGGKDS +LA LA H +H Y E ++ L +
Sbjct: 44 LQKAKKILLAVSGGKDSFVLADTLASFIDHNKLIAYNIVEGIHGYNRKEQVEQLKKFLTD 103
Query: 82 QGIE--HEIIYTQIAATINEKRREKS------SFCSFCSRLRRGTLYSKALEEGYNKVAI 133
GIE + + T++E + S C+FC RR + + + VA
Sbjct: 104 LGIELIEDSFKDSVGYTLDEMVKSSMEKGLNVSACTFCGGFRRKLINNAGRMVNADYVAT 163
Query: 134 AHHLDDAVESFFMNFTYNGSLRSM----PPIYRAENGLLVIRPLIKVRE 178
H+LDD V++ +N +R + P+ + +L ++PL K+ E
Sbjct: 164 GHNLDDEVQAIVINLIRGDLIRLIRFGDKPLKLSSKFVLRVKPLRKIYE 212
>ref|NP_499865.1| (NM_067464) F29C4.6.p [Caenorhabditis elegans]
pir||T33145 hypothetical protein F29C4.6 - Caenorhabditis elegans
gb|AAC19193.1| (AF067616) Hypothetical protein F29C4.6 [Caenorhabditis elegans]
Length = 373
Score = 53.9 bits (128), Expect = 2e-06
Identities = 37/140 (26%), Positives = 62/140 (43%), Gaps = 18/140 (12%)
Query: 21 KLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL----GEDLKWLS 76
KL + G+++ +G SGGKDS +LA ++ + + D + +++ G+ + L +
Sbjct: 52 KLFKRGERVAIGASGGKDSTVLAYVMKTLNDRHDYGLDLQLLSIDEGIKGYRDDSLLAVE 111
Query: 77 DLCQEQGIEHEII---------YTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEG 127
E G+ I+ I A I +K C+FC RR L A + G
Sbjct: 112 KNRVEYGLPLTILSYRDLYGWTMDDIVAKIGKKNN-----CTFCGVFRRQALDRGAFKIG 166
Query: 128 YNKVAIAHHLDDAVESFFMN 147
K+ H+ DD E+ MN
Sbjct: 167 ATKLVTGHNADDMAETLLMN 186
>ref|NP_613338.1| (NC_003551) Predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Methanopyrus kandleri AV19]
gb|AAM01268.1| (AE010305) Predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Methanopyrus kandleri AV19]
Length = 305
Score = 53.5 bits (127), Expect = 2e-06
Identities = 50/203 (24%), Positives = 88/203 (42%), Gaps = 29/203 (14%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKW----- 74
Y L E +++++G SGGKDS+ +L + + + + V V L D W
Sbjct: 69 YDLFEPREEVVVGFSGGKDSVTCLLMLEPLTRRLGLR--IRPVLVETRLHGDPIWGREGR 126
Query: 75 --LSDLCQEQGIEHEIIYTQIAATINEKRREK-SSFCSFCSRLRRGTLYSKALEEGYNKV 131
++C+ G + E Y + + E E S C CS +RR + L E +K+
Sbjct: 127 EVCEEICRSLGFQLE--YVEPREDVGELAEEHGESPCLICSLIRR-----RELRERGDKL 179
Query: 132 AIAHHLDDAVESFFMNFTYNGSLRSMPPI-----YRAE------NGLLVIRPLIKVREAS 180
+AH LDDA+ + + L + P+ R+E ++RP+I+V E
Sbjct: 180 VLAHTLDDAIVTAMASAIKGEGLNILRPVEELGGMRSEYVDYDFPETTIVRPMIRVPEVW 239
Query: 181 SIHFVTSQNIPVAPDCNCPAKQP 203
+ +P+ + +CP +P
Sbjct: 240 TRLIPGEVGLPIF-ESDCPYSKP 261
>dbj|BAB59586.1| (AP000992) hypothetical protein [Thermoplasma volcanium]
Length = 312
Score = 53.1 bits (126), Expect = 3e-06
Identities = 48/174 (27%), Positives = 77/174 (43%), Gaps = 12/174 (6%)
Query: 29 ILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWLSDLCQEQGI 84
I + LSGGKDS + +L ++ + KA TV G+ L+ LC GI
Sbjct: 54 ISVALSGGKDSSVTLFLLHKILGNRK-NMKIKAFTVDEGIDGYRPSGLESAKRLCTSLGI 112
Query: 85 EHEII--YTQIAATINE--KRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDA 140
+HE I Y T++ K C++C LRR + A ++ + VA+ +LDD
Sbjct: 113 DHETISFYDSYGLTLDSIVKTNPVKIPCAYCGPLRRKLINEMADKQDADYVALGLNLDDY 172
Query: 141 VESFFMNFT---YNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHFVTSQNIP 191
+S MN ++ +R P R + I PL + E + + + +IP
Sbjct: 173 SQSILMNVAKGDFDRFIRMSPQTDRKVGLVRRIAPLRTILEKEVVLYAVTNDIP 226
>ref|NP_110964.1| (NC_002689) Predicted ATPase (PP-loop superfamily) [Thermoplasma
volcanium]
Length = 309
Score = 53.1 bits (126), Expect = 3e-06
Identities = 48/174 (27%), Positives = 77/174 (43%), Gaps = 12/174 (6%)
Query: 29 ILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWLSDLCQEQGI 84
I + LSGGKDS + +L ++ + KA TV G+ L+ LC GI
Sbjct: 51 ISVALSGGKDSSVTLFLLHKILGNRK-NMKIKAFTVDEGIDGYRPSGLESAKRLCTSLGI 109
Query: 85 EHEII--YTQIAATINE--KRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDA 140
+HE I Y T++ K C++C LRR + A ++ + VA+ +LDD
Sbjct: 110 DHETISFYDSYGLTLDSIVKTNPVKIPCAYCGPLRRKLINEMADKQDADYVALGLNLDDY 169
Query: 141 VESFFMNFT---YNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHFVTSQNIP 191
+S MN ++ +R P R + I PL + E + + + +IP
Sbjct: 170 SQSILMNVAKGDFDRFIRMSPQTDRKVGLVRRIAPLRTILEKEVVLYAVTNDIP 223
>pir||S66097 cell-cycle protein homolog yacA - Bacillus subtilis
dbj|BAA05302.1| (D26185) unknown [Bacillus subtilis]
Length = 486
Score = 52.8 bits (125), Expect = 4e-06
Identities = 59/237 (24%), Positives = 93/237 (38%), Gaps = 27/237 (11%)
Query: 4 EISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVT 63
+I K V + K N T K G I++G+SGG DS+ L L H +
Sbjct: 13 DIVKSVKDFLNKHNLTLK----GATIIVGVSGGPDSMALLHAL-----HTLCGRSANVIA 63
Query: 64 VHYG-------LGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRR 116
H ED++++ C+ + + E + A EK K + C
Sbjct: 64 AHVDHRFRGAESEEDMRFVQAYCKAEQLVCETAQINVTAYAQEKGLNKQAAARDCRYQFF 123
Query: 117 GTLYSKALEEGYNKVAIAHHLDDAVESFFMNF---TYNGSLRSMPPIYRAENGLLVIRPL 173
+ SK + +A+AHH DD VE+ M T L M P+ R G +IRP
Sbjct: 124 EEIMSK---HQADYLALAHHGDDQVETMLMKLAKGTLGTGLAGMQPVRRFGTG-RIIRPF 179
Query: 174 IKVREASSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLK-EMQNLHPRF 229
+ + + +H+ + D + T ++ R FLK E ++H RF
Sbjct: 180 LTITKEEILHYCHENGLSYRTDESNAKDDYTRNR---FRKTVLPFLKQESPDVHKRF 233
>ref|NP_213916.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
pir||E70415 conserved hypothetical protein aq_1333 - Aquifex aeolicus
gb|AAC07321.1| (AE000735) hypothetical protein [Aquifex aeolicus]
Length = 301
Score = 52.4 bits (124), Expect = 5e-06
Identities = 51/226 (22%), Positives = 95/226 (41%), Gaps = 30/226 (13%)
Query: 15 KTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKW 74
+T +K+ + DK+L+ +SGGKDS+ L +L ++ ++ + ++ G+GE
Sbjct: 37 RTIKEFKMFTKKDKVLVAISGGKDSLALWHVLRKLG------YEADGLYINLGIGE---- 86
Query: 75 LSDLCQEQGIE--HEIIYTQIAATINEK--------RREKSSFCSFCSRLRRGTLYSKAL 124
S+ +E+ ++ +I I + E+ + CS C ++R A
Sbjct: 87 YSEKSKEKVLKFAEKINGKAIIVDLKEELAGIPELVKITSREACSVCGLVKRYNFNKVAK 146
Query: 125 EEGYNKVAIAHHLDDAVESFFMN-FTYNGS-LRSMPPIYRAENGLL-VIRPLIKVREASS 181
E GYN +A H+LDD + N +N L P+ E G + ++P K E +
Sbjct: 147 EHGYNVIATGHNLDDEASALLANVLNWNEKYLGRKYPVLEEEAGFVRKVKPFCKFTEKET 206
Query: 182 IHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHP 227
+ I + CP + + + K L E++ P
Sbjct: 207 ALYALLNGIDFIEE-ECPFSEDATS------VFYKKILNEIEERSP 245
>ref|NP_142287.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||F71455 hypothetical protein PH0300 - Pyrococcus horikoshii
dbj|BAA29373.1| (AP000001) 310aa long hypothetical protein [Pyrococcus horikoshii]
Length = 310
Score = 52.4 bits (124), Expect = 5e-06
Identities = 53/232 (22%), Positives = 99/232 (41%), Gaps = 39/232 (16%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG--- 69
V +T YKL+ + ++IL+ +SGGKDS + A +L K + +H LG
Sbjct: 34 VSRTIERYKLLTKDERILVAVSGGKDSAVTAYVLK--------KLGYNIECLHINLGISG 85
Query: 70 ---EDLKWLSDLCQEQGIEHEIIYTQ--IAATINEKRREKSSFCSFCSRLRRGTLYSKAL 124
+ ++ C+ G I+ + + I E + + CS+C +R + A
Sbjct: 86 YSEKSEEYAKKQCKLIGAPLHIVRIKEILGYGIGEVKTRRPP-CSYCGLTKRYIMNKFAY 144
Query: 125 EEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSM----PPIYRAENGLLVIRPLIKVREAS 180
+ G++ +A H+LDD SF +N + + + P + + + ++PL +V E
Sbjct: 145 DNGFDAIATGHNLDDEA-SFLLNNILHWNTEYLAKGGPILPQQGKFIKKVKPLYEVTERE 203
Query: 181 SIHFVTSQNIP-VAPDCNCPAKQPTSDKPPIARLAT----KNFLKEMQNLHP 227
+ + + + + +C P AR AT K L E++ P
Sbjct: 204 VVAYALAVGLEYIVEEC------------PYARGATTLDMKGVLNELEEKRP 243
>ref|NP_563388.1| (NC_003366) probable cell-cycle protein [Clostridium perfringens]
dbj|BAB82178.1| (AP003194) probable cell-cycle protein [Clostridium perfringens]
Length = 469
Score = 52.4 bits (124), Expect = 5e-06
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 15/191 (7%)
Query: 5 ISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTV 64
+ KKV+ + + + +I+ GDK+L+ LSGG DS+ L IL+ +++ + + A
Sbjct: 1 MKKKVIDFIKENS----MIKSGDKVLVALSGGPDSVCLLHILSELRELLHIEV-YAAHVN 55
Query: 65 HYGLGE----DLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLY 120
H GE D ++ +LC+ I+ + IN+ E++ R R +
Sbjct: 56 HCLRGESALKDEAYVEELCKNLNIKCFV----KRVDINKISEEQNISTEMAGREERYKFF 111
Query: 121 SKALEE-GYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREA 179
+ E +K+AIAH+ +D E+ M + + I +G+ IRP++ +R
Sbjct: 112 EELKNEYSLDKIAIAHNANDQAETLIMRALRGTGIEGLVGIKPVRDGIF-IRPILILRRK 170
Query: 180 SSIHFVTSQNI 190
+ N+
Sbjct: 171 EIEEYCEINNL 181
>ref|NP_279323.1| (NC_002607) Vng0190c [Halobacterium sp. NRC-1]
gb|AAG18803.1| (AE004984) Vng0190c [Halobacterium sp. NRC-1]
Length = 320
Score = 51.6 bits (122), Expect = 8e-06
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 24/184 (13%)
Query: 30 LLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWLSDLCQEQGIE 85
++GLSGGKDS +L ++ + P + + A+T+H G+ E L + L ++ I
Sbjct: 57 VIGLSGGKDSAVLTDLIEETFRDDP-RVELIALTIHEGIAGYRDESLDACTTLAADRDIR 115
Query: 86 HEII-----YTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDA 140
HE++ + + + + C++C RR L A E +K+ H+LDD
Sbjct: 116 HELVTYREEFDVAMDDVADDDPLDMAPCAYCGVFRRDLLAKYADEYDADKLLTGHNLDDE 175
Query: 141 VESFFMNFT----------YNGSLRSMPPIYRAENGLLVIR--PLIKVREASSIHFVTSQ 188
E+ MN ++ SL S RAE ++ R PL + E + +
Sbjct: 176 AETALMNILEGNVTQIATHFDASLGSFDD--RAELDAMIPRAKPLRDIPEKEVALYAQLR 233
Query: 189 NIPV 192
++PV
Sbjct: 234 DLPV 237
>ref|NP_387948.1| (NC_000964) similar to cell-cycle protein [Bacillus subtilis]
sp|P37563|YACA_BACSU Hypothetical protein yacA
emb|CAB11843.1| (Z99104) similar to cell-cycle protein [Bacillus subtilis]
Length = 472
Score = 51.2 bits (121), Expect = 1e-05
Identities = 58/234 (24%), Positives = 91/234 (38%), Gaps = 27/234 (11%)
Query: 7 KKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHY 66
K V + K N T K G I++G+SGG DS+ L L H + H
Sbjct: 2 KSVKDFLNKHNLTLK----GATIIVGVSGGPDSMALLHAL-----HTLCGRSANVIAAHV 52
Query: 67 G-------LGEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTL 119
ED++++ C+ + + E + A EK K + C +
Sbjct: 53 DHRFRGAESEEDMRFVQAYCKAEQLVCETAQINVTAYAQEKGLNKQAAARDCRYQFFEEI 112
Query: 120 YSKALEEGYNKVAIAHHLDDAVESFFMNF---TYNGSLRSMPPIYRAENGLLVIRPLIKV 176
SK + +A+AHH DD VE+ M T L M P+ R G +IRP + +
Sbjct: 113 MSK---HQADYLALAHHGDDQVETMLMKLAKGTLGTGLAGMQPVRRFGTG-RIIRPFLTI 168
Query: 177 REASSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLK-EMQNLHPRF 229
+ +H+ + D + T ++ R FLK E ++H RF
Sbjct: 169 TKEEILHYCHENGLSYRTDESNAKDDYTRNR---FRKTVLPFLKQESPDVHKRF 219
>ref|NP_349800.1| (NC_003030) Cell cycle protein MesJ ortholog, ATPase of the PP-loop
superamily [Clostridium acetobutylicum]
gb|AAK81140.1|AE007816_4 (AE007816) Cell cycle protein MesJ ortholog, ATPase of the PP-loop
superamily [Clostridium acetobutylicum]
Length = 461
Score = 51.2 bits (121), Expect = 1e-05
Identities = 42/167 (25%), Positives = 74/167 (44%), Gaps = 17/167 (10%)
Query: 22 LIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHY-------GLGEDLKW 74
+I++ D+I++ +SGG DSI L IL +++ KF+ H +D ++
Sbjct: 14 MIKQNDRIVVAVSGGPDSICLLHILFKLKD----KFNTSICAAHVNHCIRGEAADKDEEY 69
Query: 75 LSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEE-GYNKVAI 133
+ C++ I+ + +N+ EK R R + + E NK+AI
Sbjct: 70 VKKFCEKLDIQFYV----KRVDVNKIAHEKKISSEMAGREIRYAFFEEVKERFKANKIAI 125
Query: 134 AHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREAS 180
AH+ +D E+ M + I +G IRPLI++R +S
Sbjct: 126 AHNANDQAETIMMRIIRGTGTEGIKGIRPVRDG-YYIRPLIEIRRSS 171
>ref|NP_469596.1| (NC_003212) fusion protein, N-terminal part similar to B. subtilis
YacA protein, C-terminal part similar to
hypoxanthine-guanine phosphoribosyltransferase [Listeria
innocua]
emb|CAC95484.1| (AL596164) fusion protein, N-terminal part similar to B. subtilis
YacA protein, C-terminal part similar to
hypoxanthine-guanine phosphoribosyltransferase [Listeria
innocua]
Length = 648
Score = 51.2 bits (121), Expect = 1e-05
Identities = 53/210 (25%), Positives = 89/210 (42%), Gaps = 18/210 (8%)
Query: 6 SKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVH 65
+KK +H K + LI DK+L+ +SGG DS L L + K ++
Sbjct: 4 TKKRIH---KYIEKHDLIRSDDKLLVAVSGGPDSFALLHFL--WSANLVPKEAIAVAHLN 58
Query: 66 YGLGEDLKW----LSDLCQEQGIEHEIIYTQIAATINEKRREK-SSFCSFCSRLRRGTLY 120
+ L E+ + + C+E+ I I + +KR EK +R+ R +
Sbjct: 59 HHLRENAEKEQLAVQTFCEERDIPFFIEEVDV-----KKRAEKLQKGIEETARIVRYDFF 113
Query: 121 SKAL-EEGYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIY--RAENGLLVIRPLIKVR 177
K + E NK+ +AHH DD +E+ M S I R G IRP + +
Sbjct: 114 EKVMAENNINKLVLAHHADDQIETILMRLVRGSSSIGWSGIQPKREVRGGYAIRPFLPIT 173
Query: 178 EASSIHFVTSQNIPVAPDCNCPAKQPTSDK 207
+A I + T +P D + +++ T ++
Sbjct: 174 KAEIIEYATKHALPYEIDESNTSQEYTRNR 203
>emb|CAB51028.1| (AJ243808) YaeN protein [Bradyrhizobium japonicum]
Length = 361
Score = 50.8 bits (120), Expect = 1e-05
Identities = 49/196 (25%), Positives = 79/196 (40%), Gaps = 16/196 (8%)
Query: 23 IEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL----GEDLKWLSDL 78
++ ++L +SGG DSI L + AR Q+ VTV +GL + + + L
Sbjct: 21 LKSAPALVLAVSGGPDSIALMWLAARWQRSLARGPRLTVVTVDHGLRAEAAREAREVKRL 80
Query: 79 CQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLD 138
E G+ H + + A + K+ + R L A G + V AH D
Sbjct: 81 ATELGLPHRTLRWRGA-------KPKTGLPAAAREARYRLLMQAARSAGASHVLTAHTRD 133
Query: 139 DAVESFFMNFTYNGSLRSMPPIYR--AENGLLVIRPLIKVREASSIHFVTSQNIPVAPDC 196
D E+ M L + + R +G+++ RPL+ V +A I + I A D
Sbjct: 134 DQAETLLMRLVRGSGLAGLSAMARLTERDGIVLARPLLDVPKAQLIATLKRAKIGFADD- 192
Query: 197 NCPAKQPTSDKPPIAR 212
P + T+ P R
Sbjct: 193 --PTNRDTAFTRPRLR 206
>ref|NP_181956.1| (NM_129991) hypothetical protein [Arabidopsis thaliana]
pir||T02383 hypothetical protein F4I1.8 - Arabidopsis thaliana
gb|AAC16077.1| (AC004521) hypothetical protein [Arabidopsis thaliana]
Length = 358
Score = 50.8 bits (120), Expect = 1e-05
Identities = 39/153 (25%), Positives = 75/153 (48%), Gaps = 11/153 (7%)
Query: 3 YEISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAV 62
YE+ ++ +H V N +L + G+++ +G SGGKDS +LA +L+ + + + D +
Sbjct: 39 YEVFEEEIHQVIVQN---RLFKSGERVAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLL 95
Query: 63 TVHYGL----GEDLKWLSDLCQEQGIEHEII-YTQIAA-TINE--KRREKSSFCSFCSRL 114
++ G+ + L+ + + G+ +I+ Y + T++E K + C+FC
Sbjct: 96 SIDEGITGYRDDSLETVKRNEVQYGLPLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVF 155
Query: 115 RRGTLYSKALEEGYNKVAIAHHLDDAVESFFMN 147
RR L A K+ H+ DD E+ +N
Sbjct: 156 RRQALDRGAALLKVEKLVTGHNADDIAETVLLN 188
>ref|NP_654012.1| (NC_003995) UPF0021, Uncharacterized protein family UPF0021
[Bacillus anthracis A2012] [Bacillus anthracis str.
A2012]
Length = 476
Score = 50.8 bits (120), Expect = 1e-05
Identities = 47/218 (21%), Positives = 98/218 (44%), Gaps = 16/218 (7%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTV-HYGLG----EDLKW 74
+ +++E I++G+SGG DS+ L L ++K A +F+ V H G EDL++
Sbjct: 16 HDVLKERSTIVVGVSGGPDSLALLYYL--LEKRAAKQFEIVVAHVDHMFRGDESHEDLQF 73
Query: 75 LSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEE-GYNKVAI 133
+ DLC+ G +I I +++ +++ +R R + +++ VA+
Sbjct: 74 VQDLCKGLG----VICETIRINVSQYQKQYGMNAQVAARECRYAFLERIMKKYDARYVAL 129
Query: 134 AHHLDDAVESFFMNFTYNGSLRSMP--PIYRAENGLLVIRPLIKVREASSIHFVTSQNIP 191
HH DD VE+ M + + + R + +IRPL+ V + +++ +
Sbjct: 130 GHHGDDQVETILMRLVRGSTPKGYAGIAVKRPFHNGYLIRPLLGVTKEEIVNY--CNELK 187
Query: 192 VAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHPRF 229
+ P + K+ + + + + +E +H +F
Sbjct: 188 IIPRIDPSNKKEVYTRNRLRKYVLPHLKEENPQVHEKF 225
>ref|NP_623996.1| (NC_003869) predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Thermoanaerobacter tengcongensis]
gb|AAM25600.1| (AE013188) predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Thermoanaerobacter tengcongensis]
Length = 300
Score = 50.4 bits (119), Expect = 2e-05
Identities = 44/192 (22%), Positives = 86/192 (43%), Gaps = 22/192 (11%)
Query: 21 KLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQ 80
K+ ++ DK+L+ +SGGKDS+ L +L + ++ A+ ++ G+GE ++ +
Sbjct: 42 KMFKKDDKVLVVVSGGKDSMALWDVLVKEG------YNVVAMYINLGIGEYSNRSQEVVE 95
Query: 81 EQGIEHEIIYTQIAATINEK---------RREKSSFCSFCSRLRRGTLYSKALEEGYNKV 131
++ + I I E+ + K S CS C ++R A + G++ +
Sbjct: 96 NFAKKNNL--PLIVKNIKEEFGLDIYKLSKTLKRSPCSVCGTIKRYLFNKVAYDNGFSVI 153
Query: 132 AIAHHLDDAVESFFMNFTYNGS--LRSMPPIYRAENGLLV--IRPLIKVREASSIHFVTS 187
A H+LDD + N G L P+ + L+ ++PL + E ++++V
Sbjct: 154 ATGHNLDDEAATLLGNILNWGESYLARQGPVLPQTHPKLIKKVKPLYTLTEKENMYYVLL 213
Query: 188 QNIPVAPDCNCP 199
I + CP
Sbjct: 214 NKIEFLHE-ECP 224
>ref|NP_613431.1| (NC_003551) Predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Methanopyrus kandleri AV19]
gb|AAM01361.1| (AE010314) Predicted ATPase of the PP-loop superfamily implicated
in cell cycle control [Methanopyrus kandleri AV19]
Length = 263
Score = 50.4 bits (119), Expect = 2e-05
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 26 GDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLS--DLCQEQG 83
G +IL+ +SGGKDS +A L R++ + ++ H D K +S D+ +EQ
Sbjct: 44 GSRILVAMSGGKDSFAVAFGLKRLRGG----YGWEVEGAHVAPTVDGKKISAWDVVEEQA 99
Query: 84 --IEHEIIYTQIAATINEKRREKSS--FCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDD 139
+E + + + E + E ++ C C LRR L A E+G++ +A+ H LDD
Sbjct: 100 KILEIHAYLLEPESDVLELKEEMNARKVCYACRTLRRIELGQLAEEKGFDYIALGHTLDD 159
Query: 140 AVESFFMNFTYNGSLRSMPPIYRA--ENGLLVIRPLIKVREA 179
A + ++ G+ R Y G +IRPL++ EA
Sbjct: 160 AAATVILSL-LTGAERLKLLWYTGTWRGGPRLIRPLVRCPEA 200
>ref|NP_177744.1| (NM_106266) hypothetical protein [Arabidopsis thaliana]
Length = 299
Score = 50.1 bits (118), Expect = 2e-05
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 7/148 (4%)
Query: 3 YEISKKVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAV 62
YE+ ++ +H V N +K G+++ +G SGGKDS +LA +L+ + + + D +
Sbjct: 17 YEVFEEEIHQVIVGNRLFKF---GERVAIGASGGKDSSVLAYVLSELNRRHSYGLDLFLL 73
Query: 63 TVHYGL---GEDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTL 119
++ G+ +D + Q + ++ +Y I + K++ C+FC RR L
Sbjct: 74 SIDEGITGYRDDSLETVKRNEVQIVSYKDLYGWTMDEIVKMIGLKNN-CTFCGVFRRQAL 132
Query: 120 YSKALEEGYNKVAIAHHLDDAVESFFMN 147
A +K+ H+ DD E+ +N
Sbjct: 133 DRGAALLKVDKLVTGHNADDIAETVVLN 160
>ref|NP_637946.1| (NC_003902) cell cycle protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gb|AAM41870.1| (AE012371) cell cycle protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 435
Score = 50.1 bits (118), Expect = 2e-05
Identities = 44/148 (29%), Positives = 69/148 (45%), Gaps = 24/148 (16%)
Query: 29 ILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQEQ----GI 84
+L+ SGG DS +L LA + + +AV VH+GL D + CQ+Q GI
Sbjct: 18 VLVAYSGGMDSAVLLHALAATDGYR--EAGLRAVHVHHGLHADADAWALHCQQQCADLGI 75
Query: 85 EHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVESF 144
+++ Q+A R+ S +R R ++ L G +A+AHH DD E+F
Sbjct: 76 ALQVVRVQVA-------RDSGSGLEAAARAARHAAFAATLAAG-EWLALAHHRDDQAETF 127
Query: 145 FMNFTYNGSLRSMPPIYRAENGLLVIRP 172
+ +LR+ P +GL +RP
Sbjct: 128 LLR-----ALRASGP-----DGLAAMRP 145
>sp|P53088|YGW1_YEAST Hypothetical 35.5 kDa protein in VAM7-YPT32 intergenic region
pir||S71668 hypothetical protein 1 - yeast (Saccharomyces cerevisiae)
pir||S64230 hypothetical protein YGL211w - yeast (Saccharomyces cerevisiae)
gb|AAC49498.1| (U33754) unknown [Saccharomyces cerevisiae]
Length = 317
Score = 49.3 bits (116), Expect = 4e-05
Identities = 37/144 (25%), Positives = 65/144 (44%), Gaps = 10/144 (6%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL---- 68
+ T L + G+K+ +G SGGKDS +LA +L + + + +++ G+
Sbjct: 54 IHNTIVANNLFQRGEKVAVGASGGKDSTVLAHMLKLLNDRYDYGIEIVLLSIDEGIIGYR 113
Query: 69 GEDLKWLSDLCQEQGIEHEI-----IYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKA 123
+ L + Q+ G+ EI +Y I ++S C++C RR +L A
Sbjct: 114 DDSLATVKRNQQQYGLPLEIFSFKDLYDWTMDEIVSVAGIRNS-CTYCGVFRRQSLDRGA 172
Query: 124 LEEGYNKVAIAHHLDDAVESFFMN 147
+ G + V H+ DD E+ MN
Sbjct: 173 AKLGISHVVTGHNADDMAETVLMN 196
>gb|EAA09552.1| (AAAB01008900) ebiP3783 [Anopheles gambiae str. PEST]
Length = 327
Score = 48.9 bits (115), Expect = 5e-05
Identities = 35/143 (24%), Positives = 66/143 (45%), Gaps = 8/143 (5%)
Query: 21 KLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL----GEDLKWLS 76
+L G+K+ + SGGKDS +LA ++ + K + D +++ G+ + LK ++
Sbjct: 30 QLFRPGEKVAIAASGGKDSTVLAHVMNLLNKRYNYGLDLVLLSIDEGITGYRDDSLKTVA 89
Query: 77 DLCQEQGIEHEII-YTQIAATINEK---RREKSSFCSFCSRLRRGTLYSKALEEGYNKVA 132
+ G+ ++ Y ++ ++ +S+ C+FC RR L A + VA
Sbjct: 90 QNRDDYGMPLRVLSYQELYGWTMDRIVAEIGRSNNCTFCGVFRRQALDRGARLMEVDCVA 149
Query: 133 IAHHLDDAVESFFMNFTYNGSLR 155
H+ DD E+ MN + R
Sbjct: 150 TGHNADDIAETVIMNILRGDTAR 172
>ref|NP_596064.1| (NC_003423) hypothetical protein [Schizosaccharomyces pombe]
pir||T40160 conserved hypothetical protein SPBC2G5.03 - fission yeast
(Schizosaccharomyces pombe)
emb|CAA21879.1| (AL033385) hypothetical protein [Schizosaccharomyces pombe]
Length = 335
Score = 48.9 bits (115), Expect = 5e-05
Identities = 36/152 (23%), Positives = 65/152 (42%), Gaps = 20/152 (13%)
Query: 21 KLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL----GEDLKWLS 76
KL G+++ +G SGGKDS +LA ++ + + + + ++V G+ + L +
Sbjct: 46 KLFVRGERVGIGASGGKDSTVLAYVMKLLNERYDYGLELYLISVDEGIRGYRDDSLDTVK 105
Query: 77 DLCQEQGIEHEII----------YTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEE 126
Q+ G+ +I+ + A I K C++C RR L AL
Sbjct: 106 RNQQQYGLPMKIVSYADLYDGWTMDNVVARIGTKNN-----CTYCGVFRRQALDRAALSL 160
Query: 127 GYNKVAIAHHLDDAVESFFMNFTYNGSLRSMP 158
+ + H+ DD E+ MN G + +P
Sbjct: 161 DIHHLVTGHNADDIAETILMNL-LRGDVARLP 191
>sp|Q94480|V136_DICDI VEG136 PROTEIN
gb|AAB06790.1| (U66527) ORFveg136; similar to Saccharomyces cerevisiae chromosome
VII reading frame ORF YGL211w encoded by EMBL Accession
Number Z72733 [Dictyostelium discoideum]
Length = 357
Score = 48.9 bits (115), Expect = 5e-05
Identities = 36/134 (26%), Positives = 67/134 (49%), Gaps = 8/134 (5%)
Query: 22 LIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL----GEDLKWLSD 77
L + GD++ +G SGGKDS +LA I+ + K + D +++ G+ + L+ +
Sbjct: 51 LFKRGDRVAIGASGGKDSTVLAEIMTLLNKKYDYGLDLFLLSIDEGITGYRDDSLETVKR 110
Query: 78 LCQEQGIEHEII-YTQIAA-TINEKRRE--KSSFCSFCSRLRRGTLYSKALEEGYNKVAI 133
++ I +I+ Y ++ T+++ +E C+ C RR L A+ NK+
Sbjct: 111 NQEQYPIPSQILSYKELYNWTMDDIVKEIGLKGNCTSCGVFRRQALDRGAVMLKANKIVT 170
Query: 134 AHHLDDAVESFFMN 147
H+ DD E+ FM+
Sbjct: 171 GHNADDIAETVFMD 184
>gb|EAA09344.1| (AAAB01008900) agCP15127 [Anopheles gambiae str. PEST]
Length = 342
Score = 48.9 bits (115), Expect = 5e-05
Identities = 35/143 (24%), Positives = 66/143 (45%), Gaps = 8/143 (5%)
Query: 21 KLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL----GEDLKWLS 76
+L G+K+ + SGGKDS +LA ++ + K + D +++ G+ + LK ++
Sbjct: 45 QLFRPGEKVAIAASGGKDSTVLAHVMNLLNKRYNYGLDLVLLSIDEGITGYRDDSLKTVA 104
Query: 77 DLCQEQGIEHEII-YTQIAATINEK---RREKSSFCSFCSRLRRGTLYSKALEEGYNKVA 132
+ G+ ++ Y ++ ++ +S+ C+FC RR L A + VA
Sbjct: 105 QNRDDYGMPLRVLSYQELYGWTMDRIVAEIGRSNNCTFCGVFRRQALDRGARLMEVDCVA 164
Query: 133 IAHHLDDAVESFFMNFTYNGSLR 155
H+ DD E+ MN + R
Sbjct: 165 TGHNADDIAETVIMNILRGDTAR 187
>ref|NP_438566.1| (NC_000907) cell cycle protein (mesJ) [Haemophilus influenzae Rd]
sp|P44689|MESJ_HAEIN Putative cell cycle protein mesJ homolog
pir||D64151 hypothetical protein HI0404 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC22063.1| (U32723) cell cycle protein (mesJ) [Haemophilus influenzae Rd]
Length = 430
Score = 48.9 bits (115), Expect = 5e-05
Identities = 41/154 (26%), Positives = 70/154 (44%), Gaps = 20/154 (12%)
Query: 30 LLGLSGGKDSIMLACILARM---QKHAPFKFDFKAVTVHYGLGEDL----KWLSDLCQEQ 82
L+ LSGG DS +L + A++ Q H P +A+ +H+GL + K DLC +
Sbjct: 20 LIALSGGLDSTVLLSLFAKLCQKQPHLP-PLSIRAIHIHHGLSPNADSWAKHCQDLCDQ- 77
Query: 83 GIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVE 142
QI I + +K++ +R R K L+ + AHHL+D E
Sbjct: 78 --------FQIPLIIERVQVDKTNGIEAGAREARYQAIKKYLQT-QEMLVTAHHLNDQTE 128
Query: 143 SFFMNFTYNGSLRSMPPIYRAE--NGLLVIRPLI 174
+FF+ L+ + + + G+ ++RPL+
Sbjct: 129 TFFLALKRGSGLKGLGAMQQQSVLFGMPILRPLL 162
>ref|NP_070150.1| (NC_000917) conserved hypothetical protein [Archaeoglobus fulgidus]
pir||H69414 conserved hypothetical protein AF1321 - Archaeoglobus fulgidus
gb|AAB89924.1| (AE001012) conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 287
Score = 48.5 bits (114), Expect = 7e-05
Identities = 43/194 (22%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 11 HIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG- 69
++V ++ ++++ +++L+ +SGGKDS LA +L + +D + + + G+G
Sbjct: 32 NLVKRSIKRFRILRPEERVLIAISGGKDSSALAAVLKELD------YDAELLYIDLGIGN 85
Query: 70 ---EDLKWLSDLCQEQGIEHEII----YTQIAATINEKRREKSSFCSFCSRLRRGTLYSK 122
E + + +L + ++ Y + K R K+ CS C +R +
Sbjct: 86 YSEESERVVRELSSSLDLSLNVVRLRDYGFTVDDVARKMRRKT--CSACGTAKRYIMNRF 143
Query: 123 ALEEGYNKVAIAHHLDDAVESFFMNFTYNGS---LRSMPPIYRAENGLLVIR--PLIKVR 177
A E ++ VA H +D + SF++ G+ + P + +V R PL +V
Sbjct: 144 ARENSFDVVATGHTAED-IASFYIKNVAGGTRVWAEKLMPRNEPFDEKIVTRAKPLFEVS 202
Query: 178 EASSIHFVTSQNIP 191
E ++ +V +IP
Sbjct: 203 EKENMLYVLVNDIP 216
>ref|XP_031105.1| (XM_031105) hypothetical protein XP_031105 [Homo sapiens]
Length = 348
Score = 48.1 bits (113), Expect = 9e-05
Identities = 43/154 (27%), Positives = 63/154 (39%), Gaps = 19/154 (12%)
Query: 8 KVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYG 67
+VLH V +L+ G + +G SGGKDS +LA +L + + V V G
Sbjct: 37 EVLHTV----LAGRLLPPGAVVAVGASGGKDSTVLAHVLRALAPR--LGISLQLVAVDEG 90
Query: 68 LGEDLKWLSDLCQEQGIEHEIIYTQIAA-------TINEKRREKS------SFCSFCSRL 114
+G + Q E+ T +A T++ R + S C+FC L
Sbjct: 91 IGGYRDAALAAVRRQAARWELPLTVVAYEDLFGGWTMDAVARSTAGSGRSRSCCTFCGVL 150
Query: 115 RRGTLYSKALEEGYNKVAIAHHLDDAVESFFMNF 148
RR L A G + H+ DD E+ MNF
Sbjct: 151 RRRALEEGARRVGATHIVTGHNADDMAETVLMNF 184
>pir||T31465 cell cycle protein homolog mesJ - Heliobacillus mobilis
gb|AAC84036.1| (AF080002) cell cycle protein MesJ [Heliobacillus mobilis]
Length = 470
Score = 47.8 bits (112), Expect = 1e-04
Identities = 42/169 (24%), Positives = 77/169 (44%), Gaps = 17/169 (10%)
Query: 27 DKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG-------EDLKWLSDLC 79
++I++ LSGG DS+ C+L +K +P +F + HY G ED ++++L
Sbjct: 22 ERIVIALSGGADSV---CLLLLFKKVSP-QFGIELAAAHYNHGMRGKESDEDAAFVAELT 77
Query: 80 QEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDD 139
+ ++ + A + ++E + RLR L A + G +A+AHH DD
Sbjct: 78 NRLQVP---LFLE-TAPLKWWQQEPGTKMEAARRLRYDFLSRSAEQAGARWIALAHHADD 133
Query: 140 AVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHFVTSQ 188
E+ + ++ + I A+ G V RPL+ R F+ ++
Sbjct: 134 MAETVLFHMLRGSGIKGLSGI-PAKRGPFV-RPLLPFRRKELEEFLKAE 180
>ref|NP_394578.1| (NC_002578) conserved hypothetical protein [Thermoplasma
acidophilum]
emb|CAC12246.1| (AL445066) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 314
Score = 47.8 bits (112), Expect = 1e-04
Identities = 51/176 (28%), Positives = 80/176 (44%), Gaps = 14/176 (7%)
Query: 28 KILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----EDLKWLSDLCQEQG 83
+I + +SGGKDS + +L ++ + A TV G+ L+ L + G
Sbjct: 50 RISVAISGGKDSSVTLYLLHKILSKRR-NVELTAFTVDEGISGYRPAGLESAIKLTKMLG 108
Query: 84 IEHEIIYTQ--IAATINEKRREKSSF--CSFCSRLRRGTLYSKALEEGYNKVAIAHHLDD 139
++H II Q T++ +S CS+C LRR + A + + VA+ +LDD
Sbjct: 109 VDHSIIRFQDSFGMTLDSIVGADASRIPCSYCGPLRRKLINEMAERQNADYVALGLNLDD 168
Query: 140 AVESFFMNFT---YNGSLRSMPPIYRAENGLL-VIRPLIKVREASSIHFVTSQNIP 191
+S MN Y+ LR M P A++GL+ I PL V E + + IP
Sbjct: 169 YSQSILMNVAKGDYDRLLR-MSPQKEAKDGLVRRIAPLRSVLEKEVVLYAVINGIP 223
>ref|NP_662497.1| (NC_002932) MesJ protein [Chlorobium tepidum TLS]
gb|AAM72839.1| (AE012916) MesJ protein [Chlorobium tepidum TLS]
Length = 331
Score = 47.8 bits (112), Expect = 1e-04
Identities = 43/185 (23%), Positives = 74/185 (39%), Gaps = 32/185 (17%)
Query: 21 KLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----------- 69
KL+ GD +LL +SGG DS+ L + A + A +H LG
Sbjct: 16 KLVANGDAVLLAVSGGPDSMALLHLFASV-----------ASVLHCRLGVAHCNFMLRGD 64
Query: 70 ---EDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEE 126
D ++ D C E GI+ + A+ + ++ +RL R + + E
Sbjct: 65 ASDADESFVRDACAELGIDFHVRRFDTASVSSAWKKSIEE----TARLLRYDFFGELCRE 120
Query: 127 -GYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHFV 185
Y ++A HH DD E+ N + + I R +G +IRPL+ + ++
Sbjct: 121 ASYTRIATGHHSDDNAETVLFNLFRGAGISGLRGI-RVRHG-AIIRPLLPFTRREIVAYL 178
Query: 186 TSQNI 190
+ +
Sbjct: 179 EEKRV 183
>gb|AAF58991.1| (AE003834) CG8078-PA [Drosophila melanogaster]
gb|AAM27500.1| (AY102671) LD03161p [Drosophila melanogaster]
Length = 343
Score = 47.8 bits (112), Expect = 1e-04
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 22/153 (14%)
Query: 8 KVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYG 67
++ H + +N L G+K+ + SGGKDS +LA +L + + + + +++ G
Sbjct: 36 EIHHTISSSN----LFRRGEKVAVAASGGKDSTVLAHVLKLLNERHNYGLELVLLSIDEG 91
Query: 68 LG-------EDLKWLSDLCQE--QGIEHEIIY----TQIAATINEKRREKSSFCSFCSRL 114
+ E +K D Q + + +E +Y +I A I +S+ C+FC
Sbjct: 92 ITGYRDDSLETVKQNRDDYQMPLKILSYEELYGWTMDRIVAQIG-----RSNNCTFCGVF 146
Query: 115 RRGTLYSKALEEGYNKVAIAHHLDDAVESFFMN 147
RR L A G + +A H+ DD E+ MN
Sbjct: 147 RRQALDRGAKLLGVDSIATGHNADDIAETVLMN 179
>gb|AAG12421.1| (AY005137) MesJ [Chlorobium tepidum]
Length = 351
Score = 47.8 bits (112), Expect = 1e-04
Identities = 43/185 (23%), Positives = 74/185 (39%), Gaps = 32/185 (17%)
Query: 21 KLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLG----------- 69
KL+ GD +LL +SGG DS+ L + A + A +H LG
Sbjct: 36 KLVANGDAVLLAVSGGPDSMALLHLFASV-----------ASVLHCRLGVAHCNFMLRGD 84
Query: 70 ---EDLKWLSDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEE 126
D ++ D C E GI+ + A+ + ++ +RL R + + E
Sbjct: 85 ASDADESFVRDACAELGIDFHVRRFDTASVSSAWKKSIEE----TARLLRYDFFGELCRE 140
Query: 127 -GYNKVAIAHHLDDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHFV 185
Y ++A HH DD E+ N + + I R +G +IRPL+ + ++
Sbjct: 141 ASYTRIATGHHSDDNAETVLFNLFRGAGISGLRGI-RVRHG-AIIRPLLPFTRREIVAYL 198
Query: 186 TSQNI 190
+ +
Sbjct: 199 EEKRV 203
>ref|NP_660275.1| (NM_145232) LOC90353 [Homo sapiens]
gb|AAH09037.1|AAH09037 (BC009037) Unknown (protein for MGC:17332) [Homo sapiens]
Length = 348
Score = 47.4 bits (111), Expect = 2e-04
Identities = 42/154 (27%), Positives = 63/154 (40%), Gaps = 19/154 (12%)
Query: 8 KVLHIVGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYG 67
+VLH V +L+ G + +G SGGKDS +LA + + + V V G
Sbjct: 37 EVLHTV----LAGRLLPPGAVVAVGASGGKDSTVLAHVRRALAPR--LGISLQLVAVDEG 90
Query: 68 LGEDLKWLSDLCQEQGIEHEIIYTQIAA-------TINEKRREKS------SFCSFCSRL 114
+G + Q + E+ T +A T++ R + S C+FC L
Sbjct: 91 IGGYRDAALAAVRRQAVRWELPLTVVAYEDLFGGWTMDAVARSTAGSGRSRSCCTFCGVL 150
Query: 115 RRGTLYSKALEEGYNKVAIAHHLDDAVESFFMNF 148
RR L A G + H+ DD E+ MNF
Sbjct: 151 RRRALEEGARRVGATHIVTGHNADDMAETVLMNF 184
>dbj|BAB63758.1| (AP003504) hypothetical protein~similar to Arabidopsis thaliana
chromosome 2, F4I1.8 [Oryza sativa (japonica
cultivar-group)]
Length = 387
Score = 47.4 bits (111), Expect = 2e-04
Identities = 37/143 (25%), Positives = 68/143 (46%), Gaps = 8/143 (5%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGL---- 68
+ +T L + GD++ +G SGGKDS +LA +L+ + + D ++V G+
Sbjct: 70 IHQTIVENNLFKPGDRVAIGASGGKDSTVLAYVLSELNHRHKYCLDLFLLSVDEGITGYR 129
Query: 69 GEDLKWLSDLCQEQGIEHEII-YTQIAA-TINE--KRREKSSFCSFCSRLRRGTLYSKAL 124
+ L+ + + G+ +II Y + T+++ K + C+FC RR L A
Sbjct: 130 DDSLETVKRNEIQYGLPLKIISYKDLYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAA 189
Query: 125 EEGYNKVAIAHHLDDAVESFFMN 147
+K+ H+ DD E+ +N
Sbjct: 190 LLKVDKIVTGHNADDIAETVLLN 212
>ref|NP_463750.1| (NC_003210) fusion protein, N-terminal part similar to B. subtilis
YacA protein, C-terminal part similar to
hypoxanthine-guanine phosphoribosyltransferase [Listeria
monocytogenes EGD-e]
emb|CAD00746.1| (AL591974) fusion protein, N-terminal part similar to B. subtilis
YacA protein, C-terminal part similar to
hypoxanthine-guanine phosphoribosyltransferase [Listeria
monocytogenes]
Length = 648
Score = 47.0 bits (110), Expect = 2e-04
Identities = 44/195 (22%), Positives = 81/195 (40%), Gaps = 13/195 (6%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDL----KWL 75
+ LI DK+L+ +SGG DS+ L L + K +++ L E+ + +
Sbjct: 15 HDLIRSDDKLLVAVSGGPDSLALLHFL--WNSNLVPKEAISVAHLNHQLRENAAKEQRVV 72
Query: 76 SDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKAL-EEGYNKVAIA 134
C+ QGI I I + ++ +R+ R + K + E+ NK+ +A
Sbjct: 73 ETFCERQGIPFYIEEVDIKSRAQSLQKGLEE----TARIVRYDFFEKVMAEKNINKLVLA 128
Query: 135 HHLDDAVESFFMNFTYNGSLRSMPPIY--RAENGLLVIRPLIKVREASSIHFVTSQNIPV 192
HH DD +E+ M + I R G IRP + + +A I + +
Sbjct: 129 HHADDQIETILMRLVRGSASIGWSGIQPKRELKGGQAIRPFLPITKAEIIDYAQKHELAY 188
Query: 193 APDCNCPAKQPTSDK 207
D + +++ T ++
Sbjct: 189 EIDESNTSQEYTRNR 203
>gb|AAM74001.1|AF467001_2 (AF467001) YacA/HprT-like protein [Listeria monocytogenes]
Length = 648
Score = 46.6 bits (109), Expect = 3e-04
Identities = 42/193 (21%), Positives = 76/193 (38%), Gaps = 9/193 (4%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHY--GLGEDLKWLSD 77
+ LI DK+L+ +SGG DS+ L L + H + +
Sbjct: 15 HDLIRSDDKLLVAVSGGPDSLALLHFLWNSNLVPKEAISVAHINHHLRENAANEQNVVEA 74
Query: 78 LCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKAL-EEGYNKVAIAHH 136
C+ QGI I + + ++ +R+ R + K + E+ NK+A+AHH
Sbjct: 75 FCESQGIPFYIEEVDVKSRAESLQKGIEE----TARIVRYDFFEKVMAEKKINKLALAHH 130
Query: 137 LDDAVESFFMNFTYNGSLRSMPPIY--RAENGLLVIRPLIKVREASSIHFVTSQNIPVAP 194
DD +E+ M + I R G IRP + + +A I + +
Sbjct: 131 ADDQIETILMRLVRGSASIGWSGIQPKRELKGGQAIRPFLPITKAEIIDYAQKHELAYEI 190
Query: 195 DCNCPAKQPTSDK 207
D + +++ T ++
Sbjct: 191 DESNTSQEYTRNR 203
>ref|NP_220361.1| (NC_000117) PP-loop superfamily ATPase [Chlamydia trachomatis]
pir||C71463 probable p-loop ATPase - Chlamydia trachomatis (serotype D, strain
UW3/Cx)
gb|AAC68437.1| (AE001357) PP-loop superfamily ATPase [Chlamydia trachomatis]
Length = 321
Score = 46.2 bits (108), Expect = 3e-04
Identities = 47/189 (24%), Positives = 84/189 (43%), Gaps = 24/189 (12%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGE----DLKWL 75
+ +++ K LL LSGG DS+ L +L + A F F AV V YG E + L
Sbjct: 16 FSSLDKKKKYLLALSGGSDSLFLMYLL---KSRAIF---FTAVHVDYGWRETSYQEASDL 69
Query: 76 SDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAH 135
+ LC+++ I + + ++ + E ++ R R Y E+ ++ V + H
Sbjct: 70 AALCEQEQIPFILDRPEATDPMDSRDIENAA-----RRYRYELFYRLCKEKCFSGVFLGH 124
Query: 136 HLDDAVESFFMNF---TYNGSLRSMPP--IYRAENGLLVIRPLIKVREASSIHFVTSQNI 190
H DD E+ + G+L+ M +YR + ++RPL+ + + + + S +
Sbjct: 125 HADDQAETILKRVFEGAHLGNLKGMSAQVMYR---DVALLRPLLHIPKHKIVEALDSHQV 181
Query: 191 PVAPD-CNC 198
D NC
Sbjct: 182 QYVQDITNC 190
>ref|NP_240949.1| (NC_002570) cell-cycle protein [Bacillus halodurans]
dbj|BAB03802.1| (AP001507) cell-cycle protein [Bacillus halodurans]
Length = 462
Score = 46.2 bits (108), Expect = 3e-04
Identities = 41/192 (21%), Positives = 79/192 (40%), Gaps = 7/192 (3%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLC 79
++L G +++ +SGG DS+ L L ++ A ++ L ++
Sbjct: 12 HRLFASGGLVIVAVSGGPDSMALLHFLFSHREQ--LGITVMAAHGNHQLRQEADEEETFV 69
Query: 80 QEQGIEHEIIYTQIAATINEKRREKSSFCSFCSR-LRRGTLYSKALEEGYNKVAIAHHLD 138
+ + H I++T + E+ +R LR L ++A + G +A HH D
Sbjct: 70 HQFCLSHGILFTSARLPVKERMEMSGEGVQVTARELRYKWLEAEAKKHGAAFIATGHHGD 129
Query: 139 DAVESFFMNFTYNGSL---RSMPPIYRAENGLLVIRPLIKVREASSIHFVTSQNIPVAPD 195
D +E+ M G+ R P+ R +L++RP + + + H+ NI D
Sbjct: 130 DQIETILMK-QVRGTFPLSRGGIPVRREVGDVLIVRPFLGITKGQIEHYCKEVNIEPKRD 188
Query: 196 CNCPAKQPTSDK 207
+ A T ++
Sbjct: 189 PSNNASSYTRNR 200
>ref|XP_133411.1| (XM_133411) hypothetical protein XP_133411 [Mus musculus]
gb|AAH05752.1|AAH05752 (BC005752) Unknown (protein for MGC:6894) [Mus musculus]
Length = 420
Score = 46.2 bits (108), Expect = 3e-04
Identities = 39/140 (27%), Positives = 57/140 (39%), Gaps = 15/140 (10%)
Query: 22 LIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQE 81
L+ G + +G SGGKDS +LA +L + V V G+G + +
Sbjct: 47 LLPPGAVVAVGASGGKDSTVLAHVLRELAPRLGITLHL--VAVDEGIGGYRDAALEAVRS 104
Query: 82 QGIEHEIIYTQIAA-------TINEKRREKS------SFCSFCSRLRRGTLYSKALEEGY 128
Q E+ T +A T++ R + S C+FC LRR L A G
Sbjct: 105 QAARWELPLTIVAYEDLFGGWTMDAVARSTAGSGRSRSCCTFCGVLRRRALEEGARLVGA 164
Query: 129 NKVAIAHHLDDAVESFFMNF 148
+ H+ DD E+ MNF
Sbjct: 165 THIVTGHNADDMAETVLMNF 184
>ref|NP_296607.1| (NC_002620) MesJ/Ycf62 family protein [Chlamydia muridarum]
pir||E81725 MesJ/Ycf62 family protein TC0228 [imported] - Chlamydia muridarum
(strain Nigg)
gb|AAF39100.1| (AE002290) MesJ/Ycf62 family protein [Chlamydia muridarum]
Length = 321
Score = 46.2 bits (108), Expect = 3e-04
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 19/183 (10%)
Query: 20 YKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGE----DLKWL 75
+ +++ K LL LSGG DS++L +L F AV V YG E + L
Sbjct: 16 FSSLDKKKKYLLALSGGSDSLLLMYLLRSR------GISFTAVHVDYGWRETSYQEACDL 69
Query: 76 SDLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAH 135
+ LC+ + I + ++A + + S + + R Y E + V + H
Sbjct: 70 ASLCEREQIPFILDRQEVANPM-----DFSDIENIARQYRYELFYRLCKERLFAGVFLGH 124
Query: 136 HLDDAVESFFMNF---TYNGSLRSMPPIYRAENGLLVIRPLIKVREASSIHFVTSQNIPV 192
H DD E+ + G+L+ M Y G+ ++RPL+ + + + + + I
Sbjct: 125 HADDQAETILKRVFEGAHLGNLKGMAR-YGTYKGITLLRPLLHITKRQIVEALDNYRIEY 183
Query: 193 APD 195
D
Sbjct: 184 VQD 186
>ref|NP_231873.1| (NC_002505) mesJ protein [Vibrio cholerae]
pir||D82100 mesJ protein VC2242 [imported] - Vibrio cholerae (group O1 strain
N16961)
gb|AAF95386.1| (AE004296) mesJ protein [Vibrio cholerae]
Length = 440
Score = 45.8 bits (107), Expect = 4e-04
Identities = 37/126 (29%), Positives = 58/126 (45%), Gaps = 20/126 (15%)
Query: 28 KILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGED----LKWLSDLCQEQG 83
KILL LSGG DS +L +LAR + F +D AV VH+GL + ++ C+E G
Sbjct: 19 KILLALSGGVDSQVLLALLARGRDE--FGWDVTAVHVHHGLSPNADQWAQYCQRCCREVG 76
Query: 84 IEHEIIYTQIAATIN---EKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDA 140
+ +I Y Q+ EK ++ + + TL + + H DD
Sbjct: 77 MACQIEYVQLDVASGESIEKLAREARYRVLAPHVNAQTL-----------LLLGQHADDQ 125
Query: 141 VESFFM 146
+E+F +
Sbjct: 126 LETFLL 131
>ref|NP_214296.1| (NC_000918) cell cycle protein MesJ [Aquifex aeolicus]
sp|O67728|YI87_AQUAE Hypothetical protein AQ_1887
pir||F70462 cell cycle protein MesJ - Aquifex aeolicus
gb|AAC07685.1| (AE000761) cell cycle protein MesJ [Aquifex aeolicus]
Length = 317
Score = 45.4 bits (106), Expect = 6e-04
Identities = 38/162 (23%), Positives = 70/162 (42%), Gaps = 8/162 (4%)
Query: 21 KLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYG--LGEDLKWLSDL 78
K+ ++L+ SGG DS++L +L +++ + K + H+ L E + +
Sbjct: 19 KIFSGERRVLIAFSGGVDSVVLTDVLLKLKNYFSLK---EVALAHFNHMLRESAERDEEF 75
Query: 79 CQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALE-EGYNKVAIAHHL 137
C+E E + + +E R R + LE EG++ +A AHHL
Sbjct: 76 CKEFAKERNMKIFVGKEDVRAFAKENRMSLEEAGRFLRYKFLKEILESEGFDCIATAHHL 135
Query: 138 DDAVESFFMNFTYNGSLRSMPPIYRAENGLLVIRPLIKVREA 179
+D +E+ + FT L + E ++ RPL V+ +
Sbjct: 136 NDLLETSLLFFTRGTGLDGLIGFLPKEE--VIRRPLYYVKRS 175
>ref|NP_225191.1| (NC_000922) PP-loop superfamily ATPase [Chlamydophila pneumoniae
CWL029]
ref|NP_301052.1| (NC_002491) PP-loop superfamily ATPase [Chlamydophila pneumoniae
J138]
ref|NP_445396.1| (NC_002179) MesJ/Ycf62 family protein [Chlamydophila pneumoniae
AR39]
pir||E72009 MesJ/Ycf62 family protein CP0858 [imported] - Chlamydophila
pneumoniae (strains CWL029 and AR39)
gb|AAD19134.1| (AE001680) PP-loop superfamily ATPase [Chlamydophila pneumoniae
CWL029]
gb|AAF38647.1| (AE002245) MesJ/Ycf62 family protein [Chlamydophila pneumoniae
AR39]
dbj|BAA99204.1| (AP002548) PP-loop superfamily ATPase [Chlamydophila pneumoniae
J138]
Length = 319
Score = 45.4 bits (106), Expect = 6e-04
Identities = 40/174 (22%), Positives = 74/174 (41%), Gaps = 18/174 (10%)
Query: 28 KILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYG----LGEDLKWLSDLCQEQG 83
+ LL LSGG DS+ L +L F AV + +G ++ K L +LC +G
Sbjct: 26 RYLLALSGGSDSLFLFYLLKER------GVSFTAVHIDHGWRSTSAQEAKELEELCAREG 79
Query: 84 IEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVES 143
+ ++YT A +K E + + R LY + + +AHH +D E+
Sbjct: 80 VPF-VLYTLTAEEQGDKDLENQA-----RKKRYAFLYESYRQLDAGGIFLAHHANDQAET 133
Query: 144 FFMNFTYNGSLRSMPPIYRAE--NGLLVIRPLIKVREASSIHFVTSQNIPVAPD 195
+ L ++ + +L++RPL+ + ++S + ++ I D
Sbjct: 134 VLKRLLESAHLTNLKAMAERSYVEDVLLLRPLLHIPKSSLKEALDARGISYLQD 187
>ref|NP_294931.1| (NC_001263) cell cycle protein MesJ, putative/cytosine
deaminase-related protein [Deinococcus radiodurans]
Length = 600
Score = 44.7 bits (104), Expect = 0.001
Identities = 38/136 (27%), Positives = 56/136 (40%), Gaps = 8/136 (5%)
Query: 26 GDKILLGLSGGKDSI-MLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQEQGI 84
G ++L+G+SGG DS+ +L +LA A D + +D W+SDLC G+
Sbjct: 55 GRQVLVGVSGGADSVGLLRALLAVGALPAVAHLDH---ALRPESVDDAAWVSDLCARLGV 111
Query: 85 EHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVESF 144
E+ + A R + RLR L A G + AH D E+
Sbjct: 112 PCEVTRIDVGAV---AARRNWNLEBAARRLRYDVLSRAAKHSGAEVILTAHTRRDQAETV 168
Query: 145 FMNFTY-NGSLRSMPP 159
M G +R +PP
Sbjct: 169 LMELLRGEGRIRGIPP 184
>pir||F75424 probable cell cycle protein MesJ/cytosine deaminase-related protein
- Deinococcus radiodurans (strain R1)
gb|AAF10777.1|AE001969_6 (AE001969) cell cycle protein MesJ, putative/cytosine
deaminase-related protein [Deinococcus radiodurans]
Length = 600
Score = 44.7 bits (104), Expect = 0.001
Identities = 38/136 (27%), Positives = 56/136 (40%), Gaps = 8/136 (5%)
Query: 26 GDKILLGLSGGKDSI-MLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQEQGI 84
G ++L+G+SGG DS+ +L +LA A D + +D W+SDLC G+
Sbjct: 55 GRQVLVGVSGGADSVGLLRALLAVGALPAVAHLDH---ALRPESVDDAAWVSDLCARLGV 111
Query: 85 EHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVESF 144
E+ + A R + RLR L A G + AH D E+
Sbjct: 112 PCEVTRIDVGAV---AARRNWNLEXAARRLRYDVLSRAAKHSGAEVILTAHTRRDQAETV 168
Query: 145 FMNFTY-NGSLRSMPP 159
M G +R +PP
Sbjct: 169 LMELLRGEGRIRGIPP 184
>ref|NP_228012.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||E72407 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35289.1|AE001704_10 (AE001704) conserved hypothetical protein [Thermotoga maritima]
Length = 304
Score = 44.3 bits (103), Expect = 0.001
Identities = 51/230 (22%), Positives = 91/230 (39%), Gaps = 31/230 (13%)
Query: 13 VGKTNATYKLIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDL 72
V K +K+ KIL+ +SGGKDS+ L +L ++ ++ A+ + G +
Sbjct: 34 VEKAIKKFKMFGRNSKILIAVSGGKDSVSLWHMLKKLG------YEVDALFIRAGKSGMV 87
Query: 73 KWLSDLCQEQGIEHEIIYTQI-----------AATINEKRREKSSFCSFCSRLRRGTLYS 121
+ ++ ++ E++ T++ +T + CS C +RR +
Sbjct: 88 QKAQEIVEKNA---ELLNTKLHIVDATEYFGGLSTQEISIMLRRPVCSICGVVRRYLMNK 144
Query: 122 KALEEGYNKVAIAHHLDDAVESFFMNFTY--NGSLRSMPPIYRAENGLLV--IRPLIKVR 177
A E GY+ V H+L+D N + G L P+ + LV +PL+
Sbjct: 145 FAYENGYDVVVTGHNLNDEASVLLGNILHWQEGYLERQWPLLPKTHEKLVPKAKPLVLNY 204
Query: 178 EASSIHFVTSQNIPVAPDCNCPAKQPTSDKPPIARLATKNFLKEMQNLHP 227
E + T IP + CP + L K L+E++ P
Sbjct: 205 EEDIKLYATLNEIPHL-EMACPFSVGATS------LVYKKILRELEEEQP 247
>ref|NP_643069.1| (NC_003919) cell cycle protein [Xanthomonas axonopodis pv. citri
str. 306]
gb|AAM37605.1| (AE011916) cell cycle protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 440
Score = 43.9 bits (102), Expect = 0.002
Identities = 42/148 (28%), Positives = 67/148 (44%), Gaps = 24/148 (16%)
Query: 29 ILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQEQ----GI 84
+LL SGG DS +L +LA ++ +A+ VH+GL D + CQ +
Sbjct: 23 VLLAYSGGMDSSVLLHLLAARPRYR--HAGLRALHVHHGLHADADAWAAHCQRTCDALQV 80
Query: 85 EHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVESF 144
+I+ Q+A R+ +R R +++AL G +A+AHH DD E+F
Sbjct: 81 PLQIVRVQVA-------RDSGLGLEAAARNARHAAFAQALIAG-EWLALAHHRDDQAETF 132
Query: 145 FMNFTYNGSLRSMPPIYRAENGLLVIRP 172
+ +LR+ P GL +RP
Sbjct: 133 LLR-----ALRASGP-----EGLAAMRP 150
>ref|NP_266175.1| (NC_002662) cell cycle protein MesJ [Lactococcus lactis subsp.
lactis]
gb|AAK04117.1|AE006241_6 (AE006241) cell cycle protein MesJ [Lactococcus lactis subsp.
lactis]
Length = 423
Score = 43.5 bits (101), Expect = 0.002
Identities = 45/156 (28%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 24 EEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQEQG 83
++ KILL LSGGKDS+ L L +++ + +++GL E+ K+ +E
Sbjct: 19 DKDSKILLALSGGKDSMTLFNWLYDLKE--VLGIELGLAHINHGLREESKFEEIALREMA 76
Query: 84 IEHEI-IYT-QIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAV 141
+ ++ IY + EK + F +L G E YN + AHH D V
Sbjct: 77 TKLKVPIYVDKFTGEFTEKNARDFRY-QFFEKLMIG--------ENYNILLTAHHQGDLV 127
Query: 142 ESFFMNFTYNGSLRSMPPIYRAE--NGLLVIRPLIK 175
E+ M LRS+ I + G +IRPL+K
Sbjct: 128 ETVLMRQITGRPLRSLQGIADRQPFAGGQLIRPLLK 163
>ref|NP_282593.1| (NC_002163) hypothetical protein Cj1453c [Campylobacter jejuni]
pir||D81291 hypothetical protein Cj1453c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73876.1| (AL139078) hypothetical protein Cj1453c [Campylobacter jejuni]
Length = 321
Score = 43.1 bits (100), Expect = 0.003
Identities = 45/171 (26%), Positives = 79/171 (45%), Gaps = 14/171 (8%)
Query: 22 LIEEGDKILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQE 81
L++ G K LL S G DS +L +L MQ+ K DF V ++Y ++ SDL +
Sbjct: 10 LLKRG-KNLLAFSYGSDSSVLFYLL--MQE----KIDFDLVMINYKTRKN----SDLEEL 58
Query: 82 QGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAV 141
+ E + + + I + +S+F R LE+GY+ + +AHHL+D
Sbjct: 59 KAKELALKFHK-KIFIKHAPKFQSNFEKKARDFRYDFFEKICLEQGYDHLILAHHLNDQF 117
Query: 142 ESFFMNFTYNGSLRSMPPIYRAE--NGLLVIRPLIKVREASSIHFVTSQNI 190
E F M + L + + E + ++RPL+ + + F+ ++I
Sbjct: 118 EWFLMQLSRGAGLAEILGMQECEKRSNYTLLRPLLFISKDEISSFLKEKDI 168
>ref|NP_357604.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAK98814.1| (AE008385) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 425
Score = 42.4 bits (98), Expect = 0.005
Identities = 50/220 (22%), Positives = 82/220 (36%), Gaps = 33/220 (15%)
Query: 28 KILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDL--KWLSDLCQEQGIE 85
K +L LSGG DS+ L +L+ QK + V + D K L L E E
Sbjct: 21 KAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAEA--E 78
Query: 86 HEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVESFF 145
I + + +E R + F +++ G + AHH DD VE+ F
Sbjct: 79 LPIYISNFSGEFSEARARNFRYDFFQEVMKK---------TGATALVTAHHADDQVETIF 129
Query: 146 MNFTYNGSLRSMPPIYRAE--NGLLVIRPLIKVRE---ASSIHFVTSQNIPVAPDCNCPA 200
M LR + I + + +IRP + ++ S HF + N
Sbjct: 130 MRLIRGTRLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSN----------- 178
Query: 201 KQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNV 240
+ ++L E++ +PRF D++ N +
Sbjct: 179 ----QENHYFRNRIRNSYLPELEKENPRFRDAILGIGNEI 214
>ref|NP_245226.1| (NC_002663) MesJ [Pasteurella multocida]
gb|AAK02373.1| (AE006064) MesJ [Pasteurella multocida]
Length = 431
Score = 42.4 bits (98), Expect = 0.005
Identities = 40/172 (23%), Positives = 70/172 (40%), Gaps = 13/172 (7%)
Query: 28 KILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQE--QGIE 85
+ L+G SGG DS L + A++++ P +A+ +H+GL + CQ+ Q +
Sbjct: 19 QFLIGFSGGLDSTALLLLFAKLREKQPHLM-LRAIHIHHGLSANADAWVTHCQQICQQVA 77
Query: 86 HEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVESFF 145
+I Q+ K E + + +R+ L ++ A AHH D E+FF
Sbjct: 78 IPLIVEQVKID-QHKGIEAGAREARYQAIRQHLLPNEMF-------ATAHHQQDQTETFF 129
Query: 146 MNFTYNGSLRSMPPIYRAEN--GLLVIRPLIKVREASSIHFVTSQNIPVAPD 195
+ L + + R L + RPL+ + +V P D
Sbjct: 130 LALKRGSGLAGLGAMQRKSTLYCLPICRPLLTFTRQMLLDYVKQAGCPWVED 181
>ref|NP_344564.1| (NC_003028) MesJ/Ycf62 family protein [Streptococcus pneumoniae
TIGR4]
gb|AAK74204.1| (AE007318) MesJ/Ycf62 family protein [Streptococcus pneumoniae
TIGR4]
Length = 425
Score = 42.4 bits (98), Expect = 0.005
Identities = 50/220 (22%), Positives = 82/220 (36%), Gaps = 33/220 (15%)
Query: 28 KILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDL--KWLSDLCQEQGIE 85
K +L LSGG DS+ L +L+ QK + V + D K L L E E
Sbjct: 21 KAVLALSGGLDSMFLFKVLSTYQKELEIELILAHVNHKQRIESDWEEKELRKLAAEA--E 78
Query: 86 HEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHHLDDAVESFF 145
I + + +E R + F +++ G + AHH DD VE+ F
Sbjct: 79 LPIYISNFSGEFSEARARNFRYDFFQEVMKK---------TGATALVTAHHADDQVETIF 129
Query: 146 MNFTYNGSLRSMPPIYRAE--NGLLVIRPLIKVRE---ASSIHFVTSQNIPVAPDCNCPA 200
M LR + I + + +IRP + ++ S HF + N
Sbjct: 130 MRLIRGTRLRYLSGIKEKQVVGEIEIIRPFLHFQKKDFPSIFHFEDTSN----------- 178
Query: 201 KQPTSDKPPIARLATKNFLKEMQNLHPRFFDSLENAFNNV 240
+ ++L E++ +PRF D++ N +
Sbjct: 179 ----QENHYFRNRIRNSYLPELEKENPRFRDAILGIGNEI 214
>ref|NP_228389.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
sp|Q9WZ48|Y579_THEMA Hypothetical protein TM0579
pir||D72358 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35664.1|AE001733_1 (AE001733) conserved hypothetical protein [Thermotoga maritima]
Length = 414
Score = 42.0 bits (97), Expect = 0.006
Identities = 40/182 (21%), Positives = 80/182 (42%), Gaps = 19/182 (10%)
Query: 22 LIEEGDKILLGLSGGKDSIMLACILARMQKHAP-FKFDFKAVTVHYGLGE----DLKWLS 76
++EEG+ +L+ +SGG DS+ L +L +K +P K A + + + E D +++
Sbjct: 1 MLEEGEHVLVAVSGGIDSMTLLYVL---RKFSPLLKIKITAAHLDHRIRESSRRDREFVE 57
Query: 77 DLCQEQGIEHEIIYTQIAATINEKRREKSSFCSFCSRLRRGTLYSKALEEGYNKVAIAHH 136
+C++ I E + + + + + +R L A + G +K+A+AHH
Sbjct: 58 RICRQWNIPVETSEVDVPSLWKDSGK---TLEEIAREVRYDFLKRTAKKVGASKIALAHH 114
Query: 137 LDDAVESFFMNFTYNGSLRSMPPIYRA---ENGLLVIRPLIKVREASSIHFVTSQNIPVA 193
+D +E+ + +R P+ A IRP + + + + N+P
Sbjct: 115 KNDLLET-----VVHRLIRGTGPLGLACISPKREEFIRPFLVFKRSEIEEYARKNNVPYV 169
Query: 194 PD 195
D
Sbjct: 170 VD 171
>emb|CAA10333.1| (AJ131242) hypothetical protein [Wolinella succinogenes]
Length = 210
Score = 42.0 bits (97), Expect = 0.006
Identities = 46/176 (26%), Positives = 71/176 (40%), Gaps = 35/176 (19%)
Query: 28 KILLGLSGGKDSIMLACILARMQKHAPFKFDFKAVTVHYGLGEDLKWLSDLCQEQGIEHE 87
K LLG SGG DS L +L +++ PF D V H + Q E E
Sbjct: 17 KNLLGFSGGVDSTALFFLL--LEREIPF--DIALVNYHQ-------------RAQAKEEE 59
Query: 88 IIYTQIAATINEKRREKSSFCSFC----------SRLRRGTLYSKAL-EEGYNKVAIAHH 136
++A R +K F C +RL R + + +EGY ++ +AHH
Sbjct: 60 SYAKELA-----HRHQKRCFTLSCPLGPSNFEHQARLERYRFFESLIHQEGYARLLLAHH 114
Query: 137 LDDAVESFFMNFTYNGSLRSMPPIYRAE--NGLLVIRPLIKVREASSIHFVTSQNI 190
L D +E M SL ++ E G +IRPL ++ + + ++ I
Sbjct: 115 LGDRLEWLLMRLAQGSSLSTLLGFSSREIRLGYELIRPLGEITKEALYDYLHQHQI 170
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.321 0.136 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 158,922,718
Number of Sequences: 1026957
Number of extensions: 6296275
Number of successful extensions: 14751
Number of sequences better than 1.0e-02: 115
Number of HSP's better than 0.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 78
Number of HSP's that attempted gapping in prelim test: 14601
Number of HSP's gapped (non-prelim): 116
length of query: 253
length of database: 324,149,939
effective HSP length: 118
effective length of query: 135
effective length of database: 202,969,013
effective search space: 27400816755
effective search space used: 27400816755
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 96 (41.6 bits)