BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15645835|ref|NP_208013.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(234 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_208013.1| (NC_000915) conserved hypothetical protein... 480 e-135
ref|NP_223860.1| (NC_000921) putative [Helicobacter pylori ... 464 e-130
ref|NP_562612.1| (NC_003366) undecaprenyl pyrophosphate syn... 202 3e-51
ref|NP_604223.1| (NC_003454) Undecaprenyl pyrophosphate syn... 198 4e-50
ref|NP_459226.1| (NC_003197) undecaprenyl pyrophosphate syn... 197 1e-49
ref|NP_454828.1| (NC_003198) undecaprenyl pyrophosphate syn... 196 2e-49
ref|NP_213855.1| (NC_000918) hypothetical protein [Aquifex ... 192 3e-48
gb|AAB08603.1| (U70214) hypothetical protein [Escherichia c... 192 3e-48
dbj|BAA77849.1| (D83536) Hypothetical protein HI0920. [Esch... 192 3e-48
ref|NP_285868.1| (NC_002655) orf, hypothetical protein [Esc... 192 3e-48
ref|NP_243289.1| (NC_002570) undecaprenyl pyrophosphate syn... 191 7e-48
ref|NP_660578.1| (NC_004061) undecaprenyl pyrophosphate syn... 191 7e-48
ref|NP_281985.1| (NC_002163) putative undecaprenyl diphosph... 190 1e-47
ref|NP_246928.1| (NC_002663) unknown [Pasteurella multocida... 189 2e-47
ref|NP_404662.1| (NC_003143) undecaprenyl pyrophosphate syn... 189 2e-47
ref|NP_219041.1| (NC_000919) conserved hypothetical protein... 189 2e-47
ref|NP_229199.1| (NC_000853) conserved hypothetical protein... 189 3e-47
ref|NP_273244.1| (NC_003112) undecaprenyl pyrophosphate syn... 187 8e-47
ref|NP_657791.1| (NC_003995) UPP_synthetase, Putative undec... 187 1e-46
ref|NP_439080.1| (NC_000907) conserved hypothetical protein... 187 1e-46
pdb|1JP3|A Chain A, Structure Of E.Coli Undecaprenyl Pyroph... 187 1e-46
ref|NP_539744.1| (NC_003317) UNDECAPRENYL PYROPHOSPHATE SYN... 187 1e-46
ref|NP_487472.1| (NC_003272) undecaprenyl pyrophosphate syn... 186 1e-46
ref|NP_661171.1| (NC_002932) undecaprenyl diphosphate synth... 186 1e-46
ref|NP_354385.1| (NC_003062) AGR_C_2550p [Agrobacterium tum... 186 1e-46
ref|NP_282932.1| (NC_003116) putative undecaprenyl diphosph... 186 2e-46
sp|O82827|UPPS_MICLU UNDECAPRENYL PYROPHOSPHATE SYNTHETASE ... 186 2e-46
ref|NP_297109.1| (NC_002620) undecaprenyl pyrophosphate syn... 186 2e-46
ref|NP_385605.1| (NC_003047) PUTATIVE UNDECAPRENYL PYROPHOS... 185 4e-46
pdb|1F75|A Chain A, Crystal Structure Of Undecaprenyl Dipho... 185 4e-46
ref|NP_219963.1| (NC_000117) YaeS family [Chlamydia trachom... 185 4e-46
ref|NP_623022.1| (NC_003869) Undecaprenyl pyrophosphate syn... 184 5e-46
ref|NP_487035.1| (NC_003272) undecaprenyl pyrophosphate syn... 184 7e-46
ref|NP_231887.1| (NC_002505) undecaprenyl diphosphate synth... 182 2e-45
ref|NP_348416.1| (NC_003030) Undecaprenyl pyrophosphate syn... 182 2e-45
ref|NP_268287.1| (NC_002662) undecaprenyl pyrophosphate syn... 181 4e-45
ref|NP_470688.1| (NC_003212) similar to undecaprenyl diphos... 180 1e-44
ref|NP_360227.1| (NC_003103) undecaprenyl pyrophosphate syn... 180 1e-44
ref|NP_102408.1| (NC_002678) undecaprenyl pyrophosphate syn... 180 1e-44
ref|NP_240065.1| (NC_002528) undecaprenyl pyrophosphate syn... 180 1e-44
ref|NP_389535.1| (NC_000964) similar to hypothetical protei... 177 6e-44
emb|CAD24431.1| (AJ431698) undecaprenyl-diphosphate synthas... 177 8e-44
ref|NP_442758.1| (NC_000911) hypothetical protein [Synechoc... 177 8e-44
ref|NP_269937.1| (NC_002737) putative undecaprenyl pyrophos... 176 2e-43
ref|NP_608011.1| (NC_003485) putative undecaprenyl pyrophos... 176 2e-43
ref|NP_220806.1| (NC_000963) unknown [Rickettsia prowazekii... 175 3e-43
ref|NP_464840.1| (NC_003210) similar to undecaprenyl diphos... 173 2e-42
ref|NP_371784.1| (NC_002758) undecaprenyl pyrophosphatase s... 172 4e-42
ref|NP_645960.1| (NC_003923) undecaprenyl pyrophosphatase s... 172 4e-42
ref|NP_200685.1| (NM_125264) dehydrodolichyl diphosphate - ... 170 1e-41
dbj|BAB63702.1| (AP003289) putative undecaprenyl pyrophosph... 170 1e-41
ref|NP_212254.1| (NC_001318) conserved hypothetical protein... 169 2e-41
ref|NP_444734.1| (NC_002179) undecaprenyl pyrophosphate syn... 169 2e-41
ref|NP_143446.1| (NC_000961) hypothetical protein [Pyrococc... 169 2e-41
ref|NP_224762.1| (NC_000922) YaeS family hypothetical prote... 169 2e-41
ref|NP_641752.1| (NC_003919) undecaprenyl pyrophosphate syn... 169 3e-41
gb|AAD29658.1|AF124757_18 (AF124757) unknown [Zymomonas mob... 168 5e-41
ref|NP_579328.1| (NC_003413) undecaprenyl diphosphate synth... 166 1e-40
ref|NP_111119.1| (NC_002689) Undecaprenyl pyrophosphate syn... 166 2e-40
ref|NP_357834.1| (NC_003098) Undecaprenyl diphosphate synth... 166 3e-40
sp|Q9ZEJ7|UPPS_ANAVA Undecaprenyl pyrophosphate synthetase ... 166 3e-40
ref|NP_344799.1| (NC_003028) undecaprenyl diphosphate synth... 166 3e-40
ref|NP_126263.1| (NC_000868) conserved hypothetical protein... 164 6e-40
ref|NP_252342.1| (NC_002516) undecaprenyl pyrophosphate syn... 164 7e-40
ref|NP_420726.1| (NC_002696) undecaprenyl diphosphate synth... 164 1e-39
ref|NP_636743.1| (NC_003902) undecaprenyl pyrophosphate syn... 163 1e-39
ref|NP_519529.1| (NC_003295) PROBABLE UNDECAPRENYL PYROPHOS... 163 1e-39
ref|NP_568882.1| (NM_125265) predicted protein [Arabidopsis... 163 2e-39
ref|NP_248375.1| (NC_000909) conserved hypothetical protein... 162 4e-39
ref|NP_275375.1| (NC_000916) conserved protein [Methanother... 161 6e-39
ref|NP_394020.1| (NC_002578) conserved hypothetical protein... 160 1e-38
ref|NP_298340.1| (NC_002488) undecaprenyl pyrophosphate syn... 159 3e-38
ref|NP_626749.1| (NC_003888) undecaprenyl phosphate synthet... 158 4e-38
ref|NP_216877.1| (NC_000962) hypothetical protein Rv2361c [... 158 4e-38
ref|NP_568883.1| (NM_125266) Expressed protein [Arabidopsis... 155 3e-37
ref|NP_601483.1| (NC_003450) COG0020:Undecaprenyl pyrophosp... 155 3e-37
ref|NP_565551.1| (NM_127905) expressed protein [Arabidopsis... 155 3e-37
pir||T01130 hypothetical protein F26B6.6 - Arabidopsis thal... 155 3e-37
gb|AAM67372.1| (AY084601) undecaprenyl pyrophosphate synthe... 155 4e-37
dbj|BAA97346.1| (AB020755) undecaprenyl pyrophosphate synth... 154 6e-37
ref|NP_568884.1| (NM_125267) dehydrodolichyl diphosphate sy... 150 8e-36
dbj|BAA97348.1| (AB020755) cis-prenyltransferase homolog-li... 150 8e-36
gb|AAL11543.1| (AF416720) undecaprenyl diphosphate synthase... 150 1e-35
pir||T51169 hypothetical protein [imported] - Thermus aquat... 150 1e-35
ref|NP_301525.1| (NC_002677) putative undecaprenyl pyrophos... 147 9e-35
ref|NP_614051.1| (NC_003551) Undecaprenyl pyrophosphate syn... 142 4e-33
ref|NP_560372.1| (NC_003364) conserved hypothetical protein... 138 6e-32
ref|NP_079163.1| (NM_024887) hypothetical protein FLJ13102 ... 137 1e-31
ref|XP_084054.4| (XM_084054) hypothetical protein FLJ13102 ... 136 2e-31
dbj|BAA97347.1| (AB020755) undecaprenyl pyrophosphate synth... 136 2e-31
gb|AAH03643.1|AAH03643 (BC003643) Similar to RIKEN cDNA 322... 136 2e-31
dbj|BAB12723.1| (AB048249) cis-polyprenyl diphosphate synth... 135 5e-31
ref|NP_280522.1| (NC_002607) Vng1779c [Halobacterium sp. NR... 133 2e-30
gb|EAA01246.1| (AAAB01008987) agCP12883 [Anopheles gambiae ... 130 1e-29
gb|AAH04011.1|AAH04011 (BC004011) RIKEN cDNA 3222401G21 gen... 129 2e-29
ref|NP_632642.1| (NC_003901) Undecaprenyl pyrophosphate syn... 129 2e-29
ref|NP_376036.1| (NC_003106) 262aa long hypothetical undeca... 129 3e-29
ref|NP_618595.1| (NC_003552) di-trans-poly-cis-decaprenylci... 128 6e-29
ref|NP_296167.1| (NC_001263) undecaprenyl diphosphate synth... 127 8e-29
ref|NP_341718.1| (NC_002754) Undecaprenyl diphosphate synth... 127 1e-28
ref|NP_070047.1| (NC_000917) conserved hypothetical protein... 125 5e-28
ref|NP_639818.1| (NC_003903) putative bifunctional undecapr... 121 5e-27
ref|NP_215602.1| (NC_000962) hypothetical protein Rv1086 [M... 119 3e-26
sp|P20182|YT14_STRFR Hypothetical 29.1 kDa protein in trans... 119 4e-26
ref|NP_302598.1| (NC_002677) possible undecaprenyl pyrophos... 119 4e-26
ref|NP_502142.1| (NM_069741) kinensin-like protein [Caenorh... 117 1e-25
ref|NP_572425.1| (NM_132197) CG10778 gene product [Drosophi... 114 7e-25
ref|NP_600218.1| (NC_003450) COG0020:Undecaprenyl pyrophosp... 114 9e-25
ref|NP_594957.1| (NC_003424) putative cis-prenyltransferase... 112 3e-24
ref|NP_628046.1| (NC_003888) conserved hypothetical protein... 110 2e-23
gb|AAH04117.1|AAH04117 (BC004117) Similar to RIKEN cDNA 322... 110 2e-23
ref|NP_013819.1| (NC_001145) cis-prenyltransferase involved... 109 2e-23
emb|CAD21109.1| (AL669990) probable cis-prenyltransferase [... 109 2e-23
dbj|BAA78751.1| (AB023482) ESTs C72761(E2193),AU056875(S209... 106 2e-22
ref|NP_009556.1| (NC_001134) cis-prenyltransferase involved... 102 3e-21
gb|AAA96784.1| (U51683) ORF1; open reading frame in cdsA 5'... 102 3e-21
gb|AAF46296.1| (AE003442) CG10778 gene product [Drosophila ... 99 4e-20
dbj|BAB83522.1| (AB064661) cis-prenyltransferase [Hevea bra... 99 5e-20
dbj|BAB71777.1| (AB061237) cis-prenyltransferase [Hevea bra... 96 2e-19
gb|AAM65193.1| (AY087655) undecaprenyl diphosphate synthase... 96 2e-19
dbj|BAB08234.1| (AB011483) undecaprenyl pyrophosphate synth... 96 3e-19
ref|NP_200859.1| (NM_125444) undecaprenyl diphosphate synth... 96 3e-19
ref|NP_565420.1| (NM_127311) expressed protein [Arabidopsis... 94 9e-19
gb|AAM19345.1|AF499435_1 (AF499435) hypothetical protein [A... 92 4e-18
dbj|BAB08233.1| (AB011483) undecaprenyl pyrophosphate synth... 92 4e-18
ref|NP_200858.1| (NM_125443) undecaprenyl diphosphate synth... 92 4e-18
sp|P38118|YARF_CORGL Hypothetical 26.1 kDa protein in AROF ... 92 5e-18
dbj|BAB92023.1| (AB074306) cis-prenyltransferase1 [Hevea br... 91 8e-18
dbj|BAB71776.1| (AB061234) cis-prenyltransferase [Hevea bra... 91 8e-18
dbj|BAB92024.1| (AB074307) cis-prenyltransferase2 [Hevea br... 90 2e-17
gb|AAB61966.1| (U60831) ORF1 [Haemophilus influenzae] 86 3e-16
ref|NP_147911.1| (NC_000854) hypothetical protein [Aeropyru... 86 4e-16
ref|NP_616757.1| (NC_003552) di-trans-poly-cis-decaprenylci... 85 7e-16
gb|AAD09946.1| (AF064963) unknown [Coxiella burnetii] 82 5e-15
ref|NP_633107.1| (NC_003901) Undecaprenyl pyrophosphate syn... 80 2e-14
ref|NP_619264.1| (NC_003552) undecaprenyl diphosphate synth... 79 3e-14
ref|NP_562474.1| (NC_003366) probable di-trans, poly-cis-de... 76 3e-13
dbj|BAB23728.1| (AK004993) Putative undecaprenyl diphosphat... 76 3e-13
ref|NP_348060.1| (NC_003030) Undecaprenyl pyrophosphate syn... 74 1e-12
ref|NP_080420.1| (NM_026144) RIKEN cDNA 3222401G21 [Mus mus... 71 9e-12
ref|NP_597112.1| (NC_003238) UNDECAPRENYL PYROPHOSPHATE SYN... 71 1e-11
gb|AAK62455.1|AF387010_1 (AF387010) Unknown protein [Arabid... 69 4e-11
dbj|BAB91251.1| (AB061236) cis-prenyltransferase [Hevea bra... 63 2e-09
ref|NP_280523.1| (NC_002607) Vng1781c [Halobacterium sp. NR... 63 2e-09
dbj|BAB91250.1| (AB061235) cis-prenyltransferase [Hevea bra... 58 1e-07
pir||JQ0426 hypothetical 14.2K protein - Streptomyces fradi... 57 1e-07
ref|NP_632038.1| (NC_003901) Undecaprenyl pyrophosphate syn... 50 2e-05
ref|NP_069541.1| (NC_000917) conserved hypothetical protein... 45 9e-04
>ref|NP_208013.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|P55984|UPPS_HELPY Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||E64672 conserved hypothetical protein HP1221 - Helicobacter pylori
(strain 26695)
gb|AAD08263.1| (AE000627) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 234
Score = 480 bits (1235), Expect = e-135
Identities = 234/234 (100%), Positives = 234/234 (100%)
Query: 1 MDNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTE 60
MDNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTE
Sbjct: 1 MDNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTE 60
Query: 61 NWKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRH 120
NWKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRH
Sbjct: 61 NWKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRH 120
Query: 121 FKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
FKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLR
Sbjct: 121 FKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC 234
TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC
Sbjct: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC 234
>ref|NP_223860.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZK05|UPPS_HELPJ Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||H71842 hypothetical protein jhp1142 - Helicobacter pylori (strain J99)
gb|AAD06728.1| (AE001542) putative [Helicobacter pylori J99]
Length = 234
Score = 464 bits (1195), Expect = e-130
Identities = 225/234 (96%), Positives = 233/234 (99%)
Query: 1 MDNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTE 60
MD+TLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTE
Sbjct: 1 MDSTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTE 60
Query: 61 NWKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRH 120
NWKRPKSEVDFLMKMLKKYLKDERSTYL+NNIRFRAIGDLEGFSKELRDTIL+LENDTR+
Sbjct: 61 NWKRPKSEVDFLMKMLKKYLKDERSTYLDNNIRFRAIGDLEGFSKELRDTILRLENDTRY 120
Query: 121 FKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
FKDFTQVLALNYGSKNELSRAFKSLLE+PP+HIN +ESLENEIS+RLDTHDLPEVDLLLR
Sbjct: 121 FKDFTQVLALNYGSKNELSRAFKSLLENPPNHINNIESLENEISHRLDTHDLPEVDLLLR 180
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC 234
TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC
Sbjct: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELKC 234
>ref|NP_562612.1| (NC_003366) undecaprenyl pyrophosphate synthase [Clostridium
perfringens]
dbj|BAB81402.1| (AP003191) undecaprenyl pyrophosphate synthase [Clostridium
perfringens]
Length = 253
Score = 202 bits (513), Expect = 3e-51
Identities = 104/233 (44%), Positives = 146/233 (62%), Gaps = 1/233 (0%)
Query: 2 DNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTEN 61
D KH+AIIMDGNGRWAK + R GH+ GVKT+K I C ++ LTLYAFSTEN
Sbjct: 21 DKMPKHIAIIMDGNGRWAKKRGLPRTMGHRAGVKTIKTIVKECDKLGVKYLTLYAFSTEN 80
Query: 62 WKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
WKRP+ EV+ LMK++ +++K+E N +R + IGDL F +E + IL T+
Sbjct: 81 WKRPEDEVNALMKLVVEFIKNEIDELHQNGVRVQTIGDLSRFPEEPKKAILWAMEKTKDN 140
Query: 122 KDFTQVLALNYGSKNELSRAFKSLLES-PPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
LALNYG +NE+ R KS++E I++ + E+ ++ L T +P+ DL++R
Sbjct: 141 TGVVLSLALNYGGRNEIVRGIKSVIEDVKAGKISIDDINEDMFNDYLYTKGMPDPDLIIR 200
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
GE RLSNFLLWQ +Y+E +++ I WPDF +DL I D+ R R+FG +K
Sbjct: 201 PSGEQRLSNFLLWQCAYSEFWYSQINWPDFNGEDLRKAIFDYQNRDRRFGGIK 253
>ref|NP_604223.1| (NC_003454) Undecaprenyl pyrophosphate synthetase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gb|AAL95522.1| (AE010637) Undecaprenyl pyrophosphate synthetase [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 230
Score = 198 bits (504), Expect = 4e-50
Identities = 100/231 (43%), Positives = 146/231 (62%), Gaps = 6/231 (2%)
Query: 3 NTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
N KH+AIIMDGNGRWAK + AR++GH +G KTL+ + ++ LT+YAFSTENW
Sbjct: 4 NIPKHIAIIMDGNGRWAKKRGLARSFGHMEGAKTLRKALEYLTEIGVKYLTVYAFSTENW 63
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
RP+ EV LMK+ KY+K+ER + N IRF G ++L+ I +LE +T++
Sbjct: 64 NRPQDEVSTLMKLFLKYIKNERKNMMKNKIRFFVSGRKNNVPEKLQKEIEKLEEETKNND 123
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTG 182
T +A NYGS+ E+ A +++ +I E + S L +D P+ DL++RT
Sbjct: 124 KITLNIAFNYGSRAEIVDAVNRIIKDGKENIT-----EEDFSKYL-YNDFPDPDLVIRTS 177
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
GEMR+SNFLLWQ +Y+EL+ T +LWPDF K+++ I + +R R+FG +K
Sbjct: 178 GEMRISNFLLWQIAYSELYITDVLWPDFDEKEIDKAIESYNQRERRFGGVK 228
>ref|NP_459226.1| (NC_003197) undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Salmonella
typhimurium LT2]
gb|AAL19185.1| (AE008705) undecaprenyl pyrophosphate synthetase
(di-trans,poly-cis-decaprenylcistransferase) [Salmonella
typhimurium LT2]
Length = 252
Score = 197 bits (500), Expect = 1e-49
Identities = 97/226 (42%), Positives = 143/226 (62%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + K RA+GHK G K+++ + AN+ ++ LTLYAFS+ENW RP
Sbjct: 18 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRP 77
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV LM++ L E + +N+R R IGD+ F+ L++ I + E T H T
Sbjct: 78 AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHNTGLT 137
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRTGGE 184
+A NYG + ++ + + L E + + + ++ E + ++ H+L VDL++RTGGE
Sbjct: 138 LNIAANYGGRWDIVQGVRQLAEQVQAGVLRPDQIDEERLGQQICMHELAPVDLVIRTGGE 197
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +YAEL+FT +LWPDF +D E + F R R+FG
Sbjct: 198 HRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFG 243
>ref|NP_454828.1| (NC_003198) undecaprenyl pyrophosphate synthetase [Salmonella
enterica subsp. enterica serovar Typhi]
emb|CAD08679.1| (AL627266) undecaprenyl pyrophosphate synthetase [Salmonella
enterica subsp. enterica serovar Typhi]
Length = 252
Score = 196 bits (498), Expect = 2e-49
Identities = 97/226 (42%), Positives = 143/226 (62%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + K RA+GHK G K+++ + AN+ ++ LTLYAFS+ENW RP
Sbjct: 18 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIDALTLYAFSSENWNRP 77
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV LM++ L E + +N+R R IGD+ F+ L++ I + E T H T
Sbjct: 78 AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDISRFNSRLQERIRKSEALTAHNTGLT 137
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRTGGE 184
+A NYG + ++ + + L E + + + ++ E + ++ H+L VDL++RTGGE
Sbjct: 138 LNIAANYGGRWDIVQGVRQLAELVQAGVLRPDQIDEERLGQQICMHELAPVDLVIRTGGE 197
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +YAEL+FT +LWPDF +D E + F R R+FG
Sbjct: 198 HRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALHAFANRERRFG 243
>ref|NP_213855.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O67291|UPPS_AQUAE Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||H70407 probable di-trans,poly-cis-decaprenylcistransferase (EC 2.5.1.31)
aq_1248 - Aquifex aeolicus
gb|AAC07254.1| (AE000730) hypothetical protein [Aquifex aeolicus]
Length = 231
Score = 192 bits (488), Expect = 3e-48
Identities = 93/227 (40%), Positives = 144/227 (62%), Gaps = 5/227 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWA+ + R GH +G + +DI +C ++ LTL+AFSTENW RP
Sbjct: 7 EHVAIIMDGNGRWARQRGLPRVAGHYRGAEVAEDIIEYCIELGIKHLTLFAFSTENWNRP 66
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EV L ++++ Y++ +R + +R R IG + S+ L + + +LE+D++ FK+
Sbjct: 67 KEEVKALFELMENYIRSKREKLYSLGVRVRLIGRRDRLSRGLVNLMEELESDSKDFKNLF 126
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEM 185
+A++YG ++++ RA K ++E PS ++ E S LD P+ DLL+RT GE
Sbjct: 127 LNVAIDYGGRDDILRAVKKIMEVQPSKLD-----EETFSQFLDLSCSPDPDLLIRTAGEK 181
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
R+SNFLLW +Y EL+FT LWPDFT ++ + D+ +R RKFG +
Sbjct: 182 RISNFLLWNLAYTELYFTDTLWPDFTREEFMKALEDYSRRKRKFGRV 228
>gb|AAB08603.1| (U70214) hypothetical protein [Escherichia coli]
Length = 252
Score = 192 bits (487), Expect = 3e-48
Identities = 98/226 (43%), Positives = 141/226 (62%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + K RA+GHK G K+++ + AN+ +E LTLYAFS+ENW RP
Sbjct: 18 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 77
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV LM++ L E + +N+R R IGD F+ L++ I + E T T
Sbjct: 78 AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLT 137
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRTGGE 184
+A NYG + ++ + + L E + ++ E+ N+ + H+L VDL++RTGGE
Sbjct: 138 LNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGE 197
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +YAEL+FT +LWPDF +D E ++ F R R+FG
Sbjct: 198 HRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFG 243
>dbj|BAA77849.1| (D83536) Hypothetical protein HI0920. [Escherichia coli]
Length = 241
Score = 192 bits (487), Expect = 3e-48
Identities = 98/226 (43%), Positives = 141/226 (62%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + K RA+GHK G K+++ + AN+ +E LTLYAFS+ENW RP
Sbjct: 7 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 66
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV LM++ L E + +N+R R IGD F+ L++ I + E T T
Sbjct: 67 AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLT 126
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRTGGE 184
+A NYG + ++ + + L E + ++ E+ N+ + H+L VDL++RTGGE
Sbjct: 127 LNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGE 186
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +YAEL+FT +LWPDF +D E ++ F R R+FG
Sbjct: 187 HRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFG 232
>ref|NP_285868.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_308203.1| (NC_002695) undecaprenyl pyrophosphate synthetase [Escherichia coli
O157:H7]
ref|NP_414716.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|Q47675|UPPS_ECOLI Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||F64741 conserved hypothetical protein b0174 - Escherichia coli
gb|AAC73285.1| (AE000127) orf, hypothetical protein [Escherichia coli K12]
gb|AAG54476.1|AE005193_6 (AE005193) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB33599.1| (AP002550) undecaprenyl pyrophosphate synthetase [Escherichia coli
O157:H7]
Length = 253
Score = 192 bits (487), Expect = 3e-48
Identities = 98/226 (43%), Positives = 141/226 (62%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + K RA+GHK G K+++ + AN+ +E LTLYAFS+ENW RP
Sbjct: 19 RHVAIIMDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 78
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV LM++ L E + +N+R R IGD F+ L++ I + E T T
Sbjct: 79 AQEVSALMELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLT 138
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRTGGE 184
+A NYG + ++ + + L E + ++ E+ N+ + H+L VDL++RTGGE
Sbjct: 139 LNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEMLNQHVCMHELAPVDLVIRTGGE 198
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +YAEL+FT +LWPDF +D E ++ F R R+FG
Sbjct: 199 HRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFG 244
>ref|NP_243289.1| (NC_002570) undecaprenyl pyrophosphate synthetase [Bacillus
halodurans]
sp|Q9KA67|UPPS_BACHD Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
dbj|BAB06142.1| (AP001515) undecaprenyl pyrophosphate synthetase [Bacillus
halodurans]
Length = 256
Score = 191 bits (484), Expect = 7e-48
Identities = 96/226 (42%), Positives = 143/226 (62%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+AIIMDGNGRWAK K R GH++G+K + I + K+E L+LYAFSTENWKRP
Sbjct: 29 KHVAIIMDGNGRWAKKKGLPRIAGHREGMKVINKIVRKAIDLKIEVLSLYAFSTENWKRP 88
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
++EVD+L+K+ +++LK E + N++ R +G L+ + + + +T+
Sbjct: 89 RTEVDYLLKLPERFLKLELPNLMEENVQVRIMGGLDTLPEHTAKAVTKAMEETKDNTGLI 148
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDTHDLPEVDLLLRTGGE 184
ALNYGS+ E+ A K + + + +++ E+ IS L T DL + DLL+RT GE
Sbjct: 149 LNFALNYGSRYEMVEAMKQVAKEVETGTLSSDAITEDVISRHLMTADLRDPDLLIRTSGE 208
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
+RLSNF+LWQ +Y+E +FT +LWPDFT L I+ + KR R++G
Sbjct: 209 IRLSNFMLWQLAYSEFWFTDVLWPDFTEHHLTEAIAVYQKRARRYG 254
>ref|NP_660578.1| (NC_004061) undecaprenyl pyrophosphate synthetase [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM67789.1| (AE014099) undecaprenyl pyrophosphate synthetase [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 249
Score = 191 bits (484), Expect = 7e-48
Identities = 96/227 (42%), Positives = 140/227 (61%), Gaps = 1/227 (0%)
Query: 5 LKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKR 64
L+H+AIIMDGNGRWA+ + K R GHK+G KT + I + + ++ LTLY FS ENW+R
Sbjct: 18 LRHIAIIMDGNGRWAEKRGKIRTLGHKEGFKTARKIIKYAVENNIKILTLYVFSRENWRR 77
Query: 65 PKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDF 124
PK E+ LMK+ LK E NIR + IGD F++ L++ I ++E T +
Sbjct: 78 PKLEITALMKLFFFALKSEIKNLNKYNIRLKIIGDTSPFNENLKNYIHKVEKQTFNNTGL 137
Query: 125 TQVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDTHDLPEVDLLLRTGG 183
+A NY + ++ R K +++ + ++ + E S L T +L VDL++RTGG
Sbjct: 138 ILNIAANYSGRWDIIRGIKKIIKDVQKDVLDIDQIQERNFSQYLSTSELLPVDLVIRTGG 197
Query: 184 EMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
E R+SNFLLWQ +Y+EL+FT ILWPDF +D ++ I F+ R R+FG
Sbjct: 198 EKRISNFLLWQIAYSELYFTDILWPDFNWRDFQHAIDYFFTRERRFG 244
>ref|NP_281985.1| (NC_002163) putative undecaprenyl diphosphate synthase
[Campylobacter jejuni]
pir||H81354 probable undecaprenyl diphosphate synthase Cj0824 [imported] -
Campylobacter jejuni (strain NCTC 11168)
emb|CAB73089.1| (AL139076) putative undecaprenyl diphosphate synthase
[Campylobacter jejuni]
Length = 222
Score = 190 bits (482), Expect = 1e-47
Identities = 97/230 (42%), Positives = 141/230 (61%), Gaps = 10/230 (4%)
Query: 3 NTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
N LKHLA++MDGN RWA+ K G+ +GVKT++ + C + L+L+AFSTENW
Sbjct: 2 NELKHLAVVMDGNRRWARAKGFLAKLGYSQGVKTMQKLMEVCMEENISNLSLFAFSTENW 61
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
KRPK E+DF+ ++L + L + + NN+R RAIGDL ++R+ I +E T+H
Sbjct: 62 KRPKDEIDFIFELLDRCLDEALEKFEKNNVRLRAIGDLSRLEDKVREKITLVEEKTKHCD 121
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLP-EVDLLLRT 181
LA++YG+++E+ RA K ++E + LE N DLP +VDL+LR
Sbjct: 122 ALCVNLAISYGARDEIIRAAKRVIE---------KKLELNEENLTQNLDLPLDVDLMLRV 172
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
G RLSNFLLWQ SYAE++F+ L+P T ++ + II +F R R FG+
Sbjct: 173 GNAKRLSNFLLWQCSYAEIYFSETLFPSLTKREFKRIIKEFRNRERTFGK 222
>ref|NP_246928.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK04073.1| (AE006235) unknown [Pasteurella multocida]
Length = 240
Score = 189 bits (481), Expect = 2e-47
Identities = 98/230 (42%), Positives = 141/230 (60%), Gaps = 1/230 (0%)
Query: 2 DNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTEN 61
+N +H+AIIMDGNGRWA+ K K R +GHK GVK +++ + ++ LTLYAFS+EN
Sbjct: 7 NNIPQHVAIIMDGNGRWAQQKGKMRIFGHKNGVKAVREAVSYARKVGIKVLTLYAFSSEN 66
Query: 62 WKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
W RPK EV+ LM + + L E NNI+ +GD+ GFS L++ I Q E T +
Sbjct: 67 WNRPKKEVNALMALFMQALDLEVKKLHKNNIKLNILGDVTGFSASLQNKIHQAEKLTENN 126
Query: 122 KDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEI-SNRLDTHDLPEVDLLLR 180
T +A NYG ++ +A KSL + ++ + ++ L T + P+VDLL+R
Sbjct: 127 TALTLNIAANYGGCWDIVQATKSLAQQVKEGKLAVDEINAQVLQQALVTKEQPQVDLLIR 186
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
T GE R+SNFLLWQ +YAEL+F+ +LWPDF K+ I + +R R+FG
Sbjct: 187 TSGEQRISNFLLWQIAYAELYFSDVLWPDFNEKEFNEAIIAYQQRHRRFG 236
>ref|NP_404662.1| (NC_003143) undecaprenyl pyrophosphate synthetase [Yersinia pestis]
emb|CAC89891.1| (AJ414146) undecaprenyl pyrophosphate synthetase [Yersinia pestis]
Length = 252
Score = 189 bits (481), Expect = 2e-47
Identities = 95/226 (42%), Positives = 139/226 (61%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK K K R +GHK GVK+++ + A H L+ LTLYAFS+ENW RP
Sbjct: 17 RHVAIIMDGNGRWAKNKGKLRVFGHKAGVKSVRRAVSFAAKHNLDALTLYAFSSENWNRP 76
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV LM++ + L E + +N+R IGD+ FS L++ I + E T +
Sbjct: 77 DQEVTALMELFVRALDSEVKSLHKHNVRLSIIGDISRFSGRLQERIRRSEKLTANNDGLK 136
Query: 126 QVLALNYGSKNELSRAFKSLLES-PPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
+A NYG + ++ + + L E + + E +++ + H+ +VDL++RTGGE
Sbjct: 137 LNIAANYGGRWDIIQGVRHLAEQVQKGELQPTDISEESLNSYICLHEQSQVDLVIRTGGE 196
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +YAEL+FT +LWPDF E ++ F +R R+FG
Sbjct: 197 HRISNFLLWQIAYAELYFTDVLWPDFDENVFEGALNAFAQRERRFG 242
>ref|NP_219041.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
sp|O83612|UPPS_TREPA Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||E71304 conserved hypothetical protein TP0603 - syphilis spirochete
gb|AAC65576.1| (AE001235) conserved hypothetical protein [Treponema pallidum]
Length = 228
Score = 189 bits (480), Expect = 2e-47
Identities = 99/229 (43%), Positives = 141/229 (61%), Gaps = 1/229 (0%)
Query: 5 LKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKR 64
++H+AIIMDGNGRWA+ + R+ GH++G++T ++I ++ +TLY FSTENWKR
Sbjct: 1 MQHVAIIMDGNGRWAERRGLRRSAGHRRGLQTAREIVAALCAIRVPFVTLYVFSTENWKR 60
Query: 65 PKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDF 124
EV FLM +++ YLK E S Y+ + IR +G + ++R I + TR +
Sbjct: 61 SAHEVHFLMNLIRWYLKKEMSFYVEHAIRVVHLGCAQTLPPDVRSQIEYVVERTRSHRGT 120
Query: 125 TQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
T LA+NYG K+E+ RA K +L S L + E LD LP VD L+RTGG+
Sbjct: 121 TVALAINYGGKDEILRAVKKVLCSTSCPDGELLT-EEAFGACLDAPQLPSVDFLIRTGGQ 179
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
R+SNFLLWQS+YAE +FT ILWPDF +D+ + ++ R R FG L+
Sbjct: 180 QRMSNFLLWQSAYAEFYFTDILWPDFRVEDMLRALDEYRLRTRTFGGLE 228
>ref|NP_229199.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||G72259 probable di-trans,poly-cis-decaprenylcistransferase (EC 2.5.1.31) -
Thermotoga maritima (strain MSB8)
gb|AAD36469.1|AE001792_9 (AE001792) conserved hypothetical protein [Thermotoga maritima]
Length = 233
Score = 189 bits (479), Expect = 3e-47
Identities = 95/227 (41%), Positives = 136/227 (59%), Gaps = 1/227 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + R GH++G + L + W ++ LT ++FSTENWKRP
Sbjct: 5 QHVAIIMDGNGRWAKKRGLPRIKGHQRGAEVLHNTVKWSLELGIKYLTAFSFSTENWKRP 64
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EV+FLM + + + E +R R +G EG +++ ++E T+ F T
Sbjct: 65 KEEVEFLMDLFVQMIDREMELLRRERVRVRILGRKEGLPEKVLKKWQEVEEKTKEFDRMT 124
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEM 185
++A NYG + E+ A + +L+ SH +E E L D+P+ DL++RT GEM
Sbjct: 125 LIIAFNYGGRREILDAVEFILKD-VSHGKKIELTEETFRQYLYLPDVPDPDLIIRTSGEM 183
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
RLSNFLLWQS+Y+EL+F LWPDFT +D I + KR R+FG L
Sbjct: 184 RLSNFLLWQSAYSELYFFKKLWPDFTKRDFLRAIESYSKRERRFGGL 230
>ref|NP_273244.1| (NC_003112) undecaprenyl pyrophosphate synthetase [Neisseria
meningitidis MC58]
pir||C81229 undecaprenyl pyrophosphate synthetase NMB0186 [imported] -
Neisseria meningitidis (group B strain MD58)
gb|AAF40643.1| (AE002375) undecaprenyl pyrophosphate synthetase [Neisseria
meningitidis MC58]
Length = 248
Score = 187 bits (475), Expect = 8e-47
Identities = 95/225 (42%), Positives = 141/225 (62%), Gaps = 5/225 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A+IMDGNGRWAK + R GHK+G+ L+++ CA ++ LT++AFSTENW+RP
Sbjct: 16 KHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFAFSTENWRRP 75
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EV FLM + + L+ + NN+R + +G E F++++ I + E T + T
Sbjct: 76 EDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILQGIEEAEALTANNTGLT 135
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEM 185
+A +YG + ++ +A L+ S I E+ ++ L D PE DL +RTGGE
Sbjct: 136 LSIAADYGGRWDILQAANKLIAEGVSEIT-----EDTLAKHLMLGDAPEPDLFIRTGGET 190
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +YAEL+FT ILWPDF K L++ ++ F KR R+FG
Sbjct: 191 RISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFG 235
>ref|NP_657791.1| (NC_003995) UPP_synthetase, Putative undecaprenyl diphosphate
synthase [Bacillus anthracis A2012] [Bacillus anthracis
str. A2012]
Length = 257
Score = 187 bits (474), Expect = 1e-46
Identities = 93/226 (41%), Positives = 143/226 (63%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + R GH +G++ +K IT + + ++ LTLYAFSTENWKRP
Sbjct: 30 EHIAIIMDGNGRWAKRRAMPRIAGHHEGMQVVKKITKFASKLNVKVLTLYAFSTENWKRP 89
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EVD+LM++ +++L + N++ R IG + R + + +T+
Sbjct: 90 KKEVDYLMQLPEEFLGTFLPELIEENVQVRVIGQQDRLPTHTRRAMEKAMEETKENTGLI 149
Query: 126 QVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
ALNYGS++E+ A + ++ +S + + + E +S+ L T LP+ +LL+RT GE
Sbjct: 150 LNFALNYGSRDEIVSAVQHMMKDSEEGKVRVEDVSEEMLSSYLMTSSLPDPELLIRTSGE 209
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
+R+SNF+LWQ +Y+E +FT + WPDFT + L N I+DF R R+FG
Sbjct: 210 LRISNFMLWQIAYSEFWFTDVYWPDFTEEHLLNAITDFQHRGRRFG 255
>ref|NP_439080.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P44938|UPPS_HAEIN Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||E64161 conserved hypothetical protein HI0920 - Haemophilus influenzae
(strain Rd KW20)
gb|AAC22578.1| (U32773) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 239
Score = 187 bits (474), Expect = 1e-46
Identities = 97/229 (42%), Positives = 134/229 (58%), Gaps = 1/229 (0%)
Query: 3 NTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
N KH+AIIMDGNGRWAK KNK R +GH GV ++ + +E LTLYAFS+ENW
Sbjct: 8 NIPKHVAIIMDGNGRWAKQKNKMRIFGHTNGVTAVRKAVAYARQIGVEVLTLYAFSSENW 67
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
RP+ E+ LM + + L E NNI + IGD+ FS+ L++ I + EN T
Sbjct: 68 SRPEQEISALMSLFMQALDREVKKLHKNNICLKIIGDVSRFSETLQEKIKKAENLTEKNT 127
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRT 181
T +A NYG ++ +A K + E + + N + L T + P VDLL+RT
Sbjct: 128 ALTLNIAANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRT 187
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE R+SNFLLWQ +YAEL+F+ +LWPDF + I+ + +R R+FG
Sbjct: 188 SGEQRISNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFG 236
>pdb|1JP3|A Chain A, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
pdb|1JP3|B Chain B, Structure Of E.Coli Undecaprenyl Pyrophosphate Synthase
Length = 253
Score = 187 bits (474), Expect = 1e-46
Identities = 96/226 (42%), Positives = 138/226 (60%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AII DGNGRWAK + K RA+GHK G K+++ + AN+ +E LTLYAFS+ENW RP
Sbjct: 19 RHVAIIXDGNGRWAKKQGKIRAFGHKAGAKSVRRAVSFAANNGIEALTLYAFSSENWNRP 78
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV L ++ L E + +N+R R IGD F+ L++ I + E T T
Sbjct: 79 AQEVSALXELFVWALDSEVKSLHRHNVRLRIIGDTSRFNSRLQERIRKSEALTAGNTGLT 138
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRTGGE 184
+A NYG + ++ + + L E + ++ E N+ + H+L VDL++RTGGE
Sbjct: 139 LNIAANYGGRWDIVQGVRQLAEKVQQGNLQPDQIDEEXLNQHVCXHELAPVDLVIRTGGE 198
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +YAEL+FT +LWPDF +D E ++ F R R+FG
Sbjct: 199 HRISNFLLWQIAYAELYFTDVLWPDFDEQDFEGALNAFANRERRFG 244
>ref|NP_539744.1| (NC_003317) UNDECAPRENYL PYROPHOSPHATE SYNTHETASE [Brucella
melitensis]
gb|AAL52008.1| (AE009523) UNDECAPRENYL PYROPHOSPHATE SYNTHETASE [Brucella
melitensis]
Length = 254
Score = 187 bits (474), Expect = 1e-46
Identities = 95/226 (42%), Positives = 139/226 (61%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + R+ GH+ GV+ L++I + L LTL+AFS+ENW RP
Sbjct: 5 RHIAIIMDGNGRWAKARGLPRSAGHRAGVEALREIVRAAGDRGLGYLTLFAFSSENWTRP 64
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV L+ +LK +++ + + NN+R IG+ + +R + + E+ T
Sbjct: 65 SGEVSDLLGLLKLFIRRDLAELHRNNVRVNIIGERAELAANIRALLNEAESLTHRNTGLN 124
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRTGGE 184
V+A NYGS++E+ RA +SL + + S+ E +S LDT +P+ DL++RT GE
Sbjct: 125 LVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSANLDTAGIPDPDLIIRTSGE 184
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
MRLSNFLLWQ++Y+E F P WPDF P DL+ F +R R+FG
Sbjct: 185 MRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQRERRFG 230
>ref|NP_487472.1| (NC_003272) undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC
7120]
dbj|BAB75131.1| (AP003593) undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC
7120]
Length = 258
Score = 186 bits (473), Expect = 1e-46
Identities = 95/229 (41%), Positives = 140/229 (60%), Gaps = 1/229 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A+IMDGNGRWA + R GH++G +TLK++ C + ++ LT YAFSTENW+RP
Sbjct: 25 QHIAVIMDGNGRWATSRGLPRIAGHRQGARTLKELLRCCKDWGIKALTAYAFSTENWQRP 84
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EVDFLM + ++ L+ E S +R IGDL K L+ + + +T + +
Sbjct: 85 IEEVDFLMLLFERLLRRELSQMHREGVRISFIGDLTALPKSLQTEMERSMTETLNNQAIH 144
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDTHDLPEVDLLLRTGGE 184
+A+NYGS+NE++RA + + E +++ E + L T D DLL+RT GE
Sbjct: 145 FTVAVNYGSRNEITRACRQVAELVQQGKLSADAVNEGIVEQHLYTTDTQPPDLLIRTSGE 204
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
MRLSNFLLWQ +Y E++FT ILWPDF + + + KR R+FG++K
Sbjct: 205 MRLSNFLLWQMAYTEMYFTDILWPDFDREAFHQALLSYQKRDRRFGQVK 253
>ref|NP_661171.1| (NC_002932) undecaprenyl diphosphate synthase [Chlorobium tepidum
TLS]
gb|AAM71513.1| (AE012805) undecaprenyl diphosphate synthase [Chlorobium tepidum
TLS]
Length = 265
Score = 186 bits (473), Expect = 1e-46
Identities = 94/227 (41%), Positives = 143/227 (62%), Gaps = 1/227 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+ IIMDGNGRWAK+K K+R GH GV++++D+ + +E LTL+ FS ENWKRP
Sbjct: 28 RHIGIIMDGNGRWAKIKGKSRIAGHVAGVESVRDVVEASSQLGIENLTLFTFSIENWKRP 87
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K E+ LMK+L K L+ E L N+IR IGD+E ++R T+ + TR +
Sbjct: 88 KPEISALMKLLIKVLRKEAVKLLENDIRLEVIGDMEMIPDDVRKTLDETIELTRKNRGMA 147
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDTHDLPEVDLLLRTGGE 184
+AL+Y K ++++A + + + E++ EN ++ L T +P+ DLL+RT GE
Sbjct: 148 MTIALSYSGKWDITQACRHIALQVKQGLLDPETIDENLFASYLSTASMPDPDLLIRTSGE 207
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
R+SNF+LWQ++Y+E+ F+ LWPDF +L I +F KR R+FG+
Sbjct: 208 YRISNFMLWQNAYSEIIFSNTLWPDFRRNELYEAIREFQKRERRFGK 254
>ref|NP_354385.1| (NC_003062) AGR_C_2550p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_532068.1| (NC_003304) undecaprenyl pyrophosphate synthase [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAK87170.1| (AE008064) AGR_C_2550p [Agrobacterium tumefaciens str. C58
(Cereon)]
gb|AAL42384.1| (AE009099) undecaprenyl pyrophosphate synthase [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 247
Score = 186 bits (473), Expect = 1e-46
Identities = 94/228 (41%), Positives = 142/228 (62%), Gaps = 1/228 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + R GH++GV+ +++ + + LTL+AFS+ENW+RP
Sbjct: 11 EHVAIIMDGNGRWAKQRGLPRVMGHRRGVEAVRETVRAAGDCGISYLTLFAFSSENWRRP 70
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+SEV LM +LK +++ + + N+R R IGD +G ++R + + E T T
Sbjct: 71 ESEVSDLMGLLKAFIRRDLAELHRENVRVRIIGDRQGLKTDIRSLLEEAEQMTAGNTKLT 130
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRTGGE 184
V+A NYGS++E++RA S+ +++ E IS+RLDT +P+ DL++RT GE
Sbjct: 131 LVIAFNYGSRDEITRATASIARDVAEGRLSADAITPEMISSRLDTSGMPDPDLIIRTSGE 190
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
RLSNFLLWQ++Y+E F P WPDF + + I + R R+FG L
Sbjct: 191 ERLSNFLLWQAAYSEFLFVPEYWPDFDRQRFFSAIEQYATRDRRFGAL 238
>ref|NP_282932.1| (NC_003116) putative undecaprenyl diphosphate synthase [Neisseria
meningitidis Z2491]
pir||H81999 probable di-trans,poly-cis-decaprenylcistransferase (EC 2.5.1.31)
NMA0081 [imported] - Neisseria meningitidis (group A
strain Z2491)
emb|CAB83397.1| (AL162752) putative undecaprenyl diphosphate synthase [Neisseria
meningitidis Z2491]
Length = 248
Score = 186 bits (472), Expect = 2e-46
Identities = 95/225 (42%), Positives = 141/225 (62%), Gaps = 5/225 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A+IMDGNGRWAK + R GHK+G+ L+++ CA ++ LT++AFSTENW+RP
Sbjct: 16 KHIAVIMDGNGRWAKKRFLPRIMGHKRGLDALENMVKHCAKLGVQYLTVFAFSTENWRRP 75
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EV FLM + + L+ + NN+R + +G E F++++ I + E T + T
Sbjct: 76 EDEVSFLMGLFLQALQKQVRRLHENNMRLKILGSRERFNRQILKGIEEAEALTANNTGLT 135
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEM 185
+A +YG + ++ +A L+ S I E+ ++ L D PE DL +RTGGE
Sbjct: 136 LSIAADYGGRWDILQAANKLIAEGVSEIT-----EDTLAKYLMLGDAPEPDLFIRTGGET 190
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +YAEL+FT ILWPDF K L++ ++ F KR R+FG
Sbjct: 191 RISNFLLWQMAYAELYFTDILWPDFDGKALDDAVASFQKRERRFG 235
>sp|O82827|UPPS_MICLU UNDECAPRENYL PYROPHOSPHATE SYNTHETASE (UPP SYNTHETASE)
(DI-TRANS-POLY-CIS-DECAPRENYLCISTRANSFERASE)
(UNDECAPRENYL DIPHOSPHATE SYNTHASE) (UDS)
pir||T48857 di-trans,poly-cis-decaprenylcistransferase (EC 2.5.1.31)
[validated] - Micrococcus luteus
dbj|BAA31993.1| (AB004319) undecaprenyl diphosphate synthase [Micrococcus luteus]
Length = 249
Score = 186 bits (472), Expect = 2e-46
Identities = 97/228 (42%), Positives = 137/228 (59%), Gaps = 1/228 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+AIIMDGNGRWAK K R GH +G++T+K IT + ++ ++ LTLYAFSTENW RP
Sbjct: 22 KHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVKKITRYASDLGVKYLTLYAFSTENWSRP 81
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EV++LMK+ +L + N++ IG ++ + +L+ + T+H T
Sbjct: 82 KDEVNYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHNTGLT 141
Query: 126 QVLALNYGSKNELSRAFKSLLESPPS-HINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
V ALNYG + E+ A + + E S I+L E E + L T ++P+ +LL+RT GE
Sbjct: 142 LVFALNYGGRKEIISAVQLIAERYKSGEISLDEISETHFNEYLFTANMPDPELLIRTSGE 201
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
RLSNFL+WQ SY+E F WPDF + L IS + R R+FG L
Sbjct: 202 ERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNRHRRFGGL 249
>ref|NP_297109.1| (NC_002620) undecaprenyl pyrophosphate synthetase [Chlamydia
muridarum]
sp|Q9PJU2|UPPS_CHLMU Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||C81670 undecaprenyl pyrophosphate synthetase TC0735 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39545.1| (AE002342) undecaprenyl pyrophosphate synthetase [Chlamydia
muridarum]
Length = 253
Score = 186 bits (471), Expect = 2e-46
Identities = 105/231 (45%), Positives = 140/231 (60%), Gaps = 5/231 (2%)
Query: 6 KHLAIIMDGNGRWAKLKN---KARAY-GHKKGVKTLKDITIWCANHKLECLTLYAFSTEN 61
KH+AIIMDGN RW K K+ A GH++G ++ I A +E LTL+AFSTEN
Sbjct: 23 KHIAIIMDGNRRWQKKHEQFCKSNAISGHRRGADSIPQIVDTAALLGVEALTLFAFSTEN 82
Query: 62 WKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
+ R K+EV L + L + S + IR R IGDL +EL++ I + + T H+
Sbjct: 83 FSRSKTEVAELFSLFNSQLHSKLSFLHDREIRLRCIGDLSKLPQELQNNIAKAVSATTHY 142
Query: 122 KDFTQVLALNYGSKNELSRAFKSLLES-PPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
+ A+NYGSKNEL RAFK L + I++ E E IS+ LDT LP+ DLL+R
Sbjct: 143 SHMELIFAINYGSKNELVRAFKELHQDLTNKKISINEISEELISSYLDTSGLPDPDLLIR 202
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
TGGEMR+SNFLLWQ +Y EL+ T +LWPDFT DL I + +R R+ G+
Sbjct: 203 TGGEMRVSNFLLWQIAYTELYVTDVLWPDFTAHDLLEAIKTYQQRSRRGGK 253
>ref|NP_385605.1| (NC_003047) PUTATIVE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE PROTEIN
[Sinorhizobium meliloti]
emb|CAC46078.1| (AL591787) PUTATIVE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE PROTEIN
[Sinorhizobium meliloti]
Length = 247
Score = 185 bits (469), Expect = 4e-46
Identities = 96/231 (41%), Positives = 137/231 (58%), Gaps = 1/231 (0%)
Query: 3 NTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
N H+AIIMDGNGRWA + R GH+KGV+ ++ A + LTL+AFS+ENW
Sbjct: 8 NVPAHVAIIMDGNGRWANARGLPRTMGHRKGVEAVRGAVRTAAEIGIRYLTLFAFSSENW 67
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
RP++EV LM +LK +++ + + N+R R IGD S ++ +++ E T
Sbjct: 68 NRPENEVSDLMGLLKAFIRRDLADLHRENVRIRVIGDRSNLSGDILPLLIEAEETTIANT 127
Query: 123 DFTQVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLRT 181
T V+A NYG+++EL+RA + L E + E IS+ +DT +P+ DL++RT
Sbjct: 128 GITVVIAFNYGARDELARAMRRLAGEVAAGRLRPEEITAERISSTIDTAGIPDPDLIIRT 187
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
GE RLSNFLLWQ +Y+EL F P LWPDFT + I + R R+FG L
Sbjct: 188 SGEERLSNFLLWQGAYSELLFIPDLWPDFTRETFFAAIEQYACRERRFGGL 238
>pdb|1F75|A Chain A, Crystal Structure Of Undecaprenyl Diphosphate Synthase
From Micrococcus Luteus B-P 26
pdb|1F75|B Chain B, Crystal Structure Of Undecaprenyl Diphosphate Synthase
From Micrococcus Luteus B-P 26
Length = 249
Score = 185 bits (469), Expect = 4e-46
Identities = 96/228 (42%), Positives = 137/228 (59%), Gaps = 1/228 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+AIIMDGNGRWAK K R GH +G++T++ IT + ++ ++ LTLYAFSTENW RP
Sbjct: 22 KHIAIIMDGNGRWAKQKKMPRIKGHYEGMQTVRKITRYASDLGVKYLTLYAFSTENWSRP 81
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EV++LMK+ +L + N++ IG ++ + +L+ + T+H T
Sbjct: 82 KDEVNYLMKLPGDFLNTFLPELIEKNVKVETIGFIDDLPDHTKKAVLEAKEKTKHNTGLT 141
Query: 126 QVLALNYGSKNELSRAFKSLLESPPS-HINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
V ALNYG + E+ A + + E S I+L E E + L T ++P+ +LL+RT GE
Sbjct: 142 LVFALNYGGRKEIISAVQLIAERYKSGEISLDEISETHFNEYLFTANMPDPELLIRTSGE 201
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
RLSNFL+WQ SY+E F WPDF + L IS + R R+FG L
Sbjct: 202 ERLSNFLIWQCSYSEFVFIDEFWPDFNEESLAQCISIYQNRHRRFGGL 249
>ref|NP_219963.1| (NC_000117) YaeS family [Chlamydia trachomatis]
sp|O84456|UPPS_CHLTR Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||E71512 hypothetical protein CT450 - Chlamydia trachomatis (serotype D,
strain UW3/Cx)
gb|AAC68050.1| (AE001319) YaeS family [Chlamydia trachomatis]
Length = 253
Score = 185 bits (469), Expect = 4e-46
Identities = 102/231 (44%), Positives = 140/231 (60%), Gaps = 5/231 (2%)
Query: 6 KHLAIIMDGNGRWAKLKN----KARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTEN 61
+H+AIIMDGN RW + K GH++G ++ I + +E LTL+AFSTEN
Sbjct: 23 RHIAIIMDGNRRWQRKHEQFCQKRAISGHRQGADSIPQIVDTALHLGVEALTLFAFSTEN 82
Query: 62 WKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
+ R KSEV L + L+ + S + IR R IGDL +EL++ I Q + T H+
Sbjct: 83 FSRSKSEVAELFSLFNSQLRSKLSFLHDREIRLRCIGDLSKLPQELQNNIEQASSATAHY 142
Query: 122 KDFTQVLALNYGSKNELSRAFKSLLESPPS-HINLLESLENEISNRLDTHDLPEVDLLLR 180
+ A+NYGSK+EL RAFK L + S I++ + E IS+ LDT LP+ DLL+R
Sbjct: 143 SRMELIFAINYGSKDELVRAFKELHQDLASKKISVNDISEELISSYLDTSGLPDPDLLIR 202
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
TGGEMR+SNFLLWQ +Y EL+ T +LWPDFT DL I + +R R+ G+
Sbjct: 203 TGGEMRVSNFLLWQIAYTELYVTDVLWPDFTANDLLEAIKTYQQRSRRGGK 253
>ref|NP_623022.1| (NC_003869) Undecaprenyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis]
gb|AAM24626.1| (AE013100) Undecaprenyl pyrophosphate synthase [Thermoanaerobacter
tengcongensis]
Length = 247
Score = 184 bits (468), Expect = 5e-46
Identities = 94/226 (41%), Positives = 140/226 (61%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+ IIMDGNGRWA+ + R YGHK GV ++++ C ++ LTLYAFSTENWKRP
Sbjct: 20 QHVGIIMDGNGRWAQKRGMPRVYGHKAGVNAVREVIRSCRELGIKYLTLYAFSTENWKRP 79
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EVDFLM +L +YL E NN+ + IGD+ ++ + I + + T
Sbjct: 80 KEEVDFLMDLLVEYLSKEVDELNKNNVVVKFIGDISRLPEKCQIEIEKAQKLTEKNTGLV 139
Query: 126 QVLALNYGSKNELSRAFKSLLESPPS-HINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
+ALNYG ++E+ +A +++ + + ++ + E+ I+ L T P+ DL++RT GE
Sbjct: 140 VNIALNYGGRDEIVKATQNICKKVLNRELSPEDITEDTITQHLYTASQPDPDLIIRTSGE 199
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
RLSNFLLWQS+Y+EL+FT +LWPDF + L + + R R+FG
Sbjct: 200 KRLSNFLLWQSAYSELWFTEVLWPDFKKRHLIEALLYYQTRKRRFG 245
>ref|NP_487035.1| (NC_003272) undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC
7120]
sp|P58563|UPPS_ANASP Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
dbj|BAB74694.1| (AP003591) undecaprenyl pyrophosphate synthetase [Nostoc sp. PCC
7120]
Length = 249
Score = 184 bits (467), Expect = 7e-46
Identities = 88/228 (38%), Positives = 140/228 (60%), Gaps = 1/228 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A+IMDGNGRWAK + R GHK+GV LKD+ C + ++ LT YAFSTENWKRP
Sbjct: 22 KHVAVIMDGNGRWAKRQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFSTENWKRP 81
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EV+FLM + ++ L+ E + N++ + +G+L + L+ I + +T++ +
Sbjct: 82 QEEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLTALPRSLQAEISRSMEETKNNRGIR 141
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRTGGE 184
+A NYG + E+ +A +++ + + + + E+ R L T + + DLL+RT GE
Sbjct: 142 FSVATNYGGRQEILQACRAIAQKVQQGLLQPDEINEEVFERHLYTAGISDPDLLIRTSGE 201
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
MRLSNFLLWQ +Y E++ T LWPDF + + + +R R+FG++
Sbjct: 202 MRLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQQRERRFGKV 249
>ref|NP_231887.1| (NC_002505) undecaprenyl diphosphate synthase [Vibrio cholerae]
pir||F82099 undecaprenyl diphosphate synthase VC2256 [imported] - Vibrio
cholerae (group O1 strain N16961)
gb|AAF95400.1| (AE004297) undecaprenyl diphosphate synthase [Vibrio cholerae]
Length = 256
Score = 182 bits (463), Expect = 2e-45
Identities = 96/231 (41%), Positives = 135/231 (57%), Gaps = 11/231 (4%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A+IMDGNGRWAK + K R +GHK GV ++ A ++ +TL+AFS+ENW+RP
Sbjct: 19 KHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRRP 78
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EV LM++ L E NN+R R IGD FS+ L+ I Q E T
Sbjct: 79 EEEVGVLMELFMTVLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNTGMV 138
Query: 126 QVLALNYGSKNELSRAFKSLLES------PPSHINLLESLENEISNRLDTHDLPEVDLLL 179
+A NYG + ++ +A ++L E PS I+ E+ L DLP+VDLL+
Sbjct: 139 VNIAANYGGQWDILQATQALAEKVTQGELQPSDID-----EDVFKQHLTMADLPDVDLLI 193
Query: 180 RTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
RT GE R+SNF+LWQ +YAE++FTP+ WP+F L ++ F R R+FG
Sbjct: 194 RTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 244
>ref|NP_348416.1| (NC_003030) Undecaprenyl pyrophosphate synthase [Clostridium
acetobutylicum]
gb|AAK79756.1|AE007688_5 (AE007688) Undecaprenyl pyrophosphate synthase [Clostridium
acetobutylicum]
Length = 257
Score = 182 bits (463), Expect = 2e-45
Identities = 95/235 (40%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 3 NTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
N KH+AIIMDGNGRWAK +N R GHK G + LK I C++ ++ LT+Y FSTENW
Sbjct: 23 NIPKHIAIIMDGNGRWAKKRNLPRTMGHKAGGEALKRIVRECSDIGVKYLTVYGFSTENW 82
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
RPK EV+ +M+++ ++LK E + NN+ IG++ G + + +N T++
Sbjct: 83 IRPKEEVNAIMRLIVEFLKREFNELNKNNVIINPIGNILGLPEACITALNDAKNKTKNNT 142
Query: 123 DFTQVLALNYGSKNELSRAFKSLL----ESPPSHINLLESLENEISNRLDTHDLPEVDLL 178
LALNYG ++E+ A K++ E+ S + + E S+ L T +P+ D++
Sbjct: 143 GLMLNLALNYGGRDEILNAVKNIFASYEENKISKDEIFNLSDEEFSSYLYTGCIPDPDII 202
Query: 179 LRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
+R GE RLSNFLLWQ +Y+E +++ I WPDF+ +DL I D+ R R+FG +K
Sbjct: 203 IRPSGEKRLSNFLLWQCAYSEFWYSNINWPDFSIEDLHTAIKDYQNRDRRFGGVK 257
>ref|NP_268287.1| (NC_002662) undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)
[Lactococcus lactis subsp. lactis]
gb|AAK06228.1|AE006441_6 (AE006441) undecaprenyl pyrophosphate synthetase (EC 2.5.1.31)
[Lactococcus lactis subsp. lactis]
Length = 244
Score = 181 bits (460), Expect = 4e-45
Identities = 96/232 (41%), Positives = 137/232 (58%), Gaps = 7/232 (3%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+ IIMDGNGRWAK K K R +GHK G+ +LKD+ + A ++ +T+YAFSTENW RP
Sbjct: 16 EHIGIIMDGNGRWAKQKGKPRIFGHKAGMDSLKDVAVHGARRGIKVMTVYAFSTENWTRP 75
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV F+M + + NI+ R IG+ EG K D+I + +T
Sbjct: 76 VDEVKFIMSLPIDFYSKYVPVLKEENIQIRMIGEREGLPKATLDSIDRAAQETSENDGMI 135
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDT----HDLPEVDLLLRT 181
A+NYG + ++ A + L +S ++LL E E+S L T +L + DL++RT
Sbjct: 136 LNFAMNYGGRRDIILAIQELAKS-GQDLSLL--TEEELSKHLQTAVLSENLRDPDLIIRT 192
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
GE R+SNFL WQS+Y+EL+F WPDF K+L+ IS F KR R++G +K
Sbjct: 193 SGEQRMSNFLTWQSAYSELYFAQTAWPDFDDKELDKAISAFQKRDRRYGGVK 244
>ref|NP_470688.1| (NC_003212) similar to undecaprenyl diphosphate synthase [Listeria
innocua]
emb|CAC96583.1| (AL596168) similar to undecaprenyl diphosphate synthase [Listeria
innocua]
Length = 252
Score = 180 bits (457), Expect = 1e-44
Identities = 95/228 (41%), Positives = 133/228 (57%), Gaps = 1/228 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + R GHK+G+ +K +T + ++ LTLYAFSTENWKRP
Sbjct: 25 RHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRP 84
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EVDFLMK+ ++ + N+R +G E + + + DT H T
Sbjct: 85 TDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPEHTMRAVEKAIADTAHCTGLT 144
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISN-RLDTHDLPEVDLLLRTGGE 184
ALNYG ++E+ A K ++ S E L E+ N L +H L + DLL+RT GE
Sbjct: 145 LNFALNYGGRSEIITAAKEAMKELVSEGKTSEDLTEELLNDHLMSHGLGDPDLLIRTSGE 204
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
+RLSNF+LWQ +Y+E +FT WPDF+ +D I ++ R R+FG L
Sbjct: 205 LRLSNFMLWQLAYSEFYFTETHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>ref|NP_360227.1| (NC_003103) undecaprenyl pyrophosphate synthetase [EC:2.5.1.31]
[Rickettsia conorii]
gb|AAL03128.1| (AE008620) undecaprenyl pyrophosphate synthetase [EC:2.5.1.31]
[Rickettsia conorii]
Length = 235
Score = 180 bits (457), Expect = 1e-44
Identities = 91/227 (40%), Positives = 138/227 (60%), Gaps = 5/227 (2%)
Query: 5 LKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKR 64
+KHLAIIMDGN RWA N ++ GHK G ++++ N + +TLY FS+ENW+R
Sbjct: 13 IKHLAIIMDGNARWADQHNLTKSEGHKAGADKIRELLPEFLNLNIPYITLYTFSSENWQR 72
Query: 65 PKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDF 124
+EVDFL+K+L YLK E + N ++ + IG L S L+ I T++
Sbjct: 73 SSTEVDFLIKLLSIYLKTELNNLHKNGVKIKVIGRLTLLSSSLQKQINNAIELTKNNNKI 132
Query: 125 TQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
T +A +YGS+ E+ A ++ S ++ +++I + L ++P+VDLL+R GG
Sbjct: 133 TLCIAFSYGSRQEIVDACTKIITSGKKAVS-----DSDIQHALYDPEMPDVDLLIRPGGV 187
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
R+SNFLLWQ++YAEL+F+P WPDF D++ I+D+ KR R FG+
Sbjct: 188 YRISNFLLWQAAYAELYFSPKYWPDFNKYDIQEAINDYSKRKRTFGK 234
>ref|NP_102408.1| (NC_002678) undecaprenyl pyrophosphate synthetase [Mesorhizobium
loti]
dbj|BAB48194.1| (AP002995) undecaprenyl pyrophosphate synthetase [Mesorhizobium
loti]
Length = 244
Score = 180 bits (456), Expect = 1e-44
Identities = 91/230 (39%), Positives = 138/230 (59%), Gaps = 1/230 (0%)
Query: 4 TLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWK 63
T H+AIIMDGNGRWAK + R GH+ GV+ L+ + + LT+YAFS+ENW
Sbjct: 3 TPAHVAIIMDGNGRWAKARGMPRLAGHRAGVEALRKTVRAAPDLGISFLTVYAFSSENWS 62
Query: 64 RPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
RPK+EV LM +LK +++ + + + +R R IGD G ++R + + E+ T +
Sbjct: 63 RPKAEVSDLMGLLKLFIRRDLAELHQSGVRVRIIGDRAGLQADIRGLLEEAESLTARNES 122
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPP-SHINLLESLENEISNRLDTHDLPEVDLLLRTG 182
T V+A NYG ++E+ R + L + I+ + + LDT +P+ +L++RT
Sbjct: 123 LTLVIAFNYGGRDEIVRTARKLASAAARGEIDAESITADSFAGGLDTQGIPDPELVIRTS 182
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
GE+RLSNFLLWQ++Y+EL F P WPDF+ + L + +F R R+FG L
Sbjct: 183 GELRLSNFLLWQAAYSELVFLPCYWPDFSREHLAEALREFAGRERRFGGL 232
>ref|NP_240065.1| (NC_002528) undecaprenyl pyrophosphate synthetase [Buchnera sp.
APS]
sp|P57330|UPPS_BUCAI Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
dbj|BAB12951.1| (AP001118) undecaprenyl pyrophosphate synthetase [Buchnera sp. APS]
Length = 251
Score = 180 bits (456), Expect = 1e-44
Identities = 96/228 (42%), Positives = 136/228 (59%), Gaps = 1/228 (0%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+AIIMDGNGRWA + K R GHK+G + +K+ + + L+ LTLYAFS+ENW RP
Sbjct: 20 HVAIIMDGNGRWATRQGKIRIMGHKEGFRAVKEAIKFSIANNLKILTLYAFSSENWNRPL 79
Query: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
E+ LM++ L E +NIRF+ IGD+ F K+L+++I E T
Sbjct: 80 FEIKALMELFLFALDTEIKNLKKHNIRFKVIGDITCFDKKLQNSIHYAEQITFDNTGLIL 139
Query: 127 VLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDTHDLPEVDLLLRTGGEM 185
+A NYG + ++ + K ++ I + + EN IS L T +L VDL++RTGGE
Sbjct: 140 NIAANYGGRWDIIESVKKIINRVQRGILDVNKIHENTISQYLSTSELLPVDLVIRTGGEK 199
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
R+SNFLLWQ +Y+EL+FT +LWPDF ++ I F R R+FG K
Sbjct: 200 RISNFLLWQIAYSELYFTDVLWPDFNCHIFQHAIDSFVSRERRFGGFK 247
>ref|NP_389535.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|O31751|UPPS_BACSU Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||A69881 conserved hypothetical protein yluA - Bacillus subtilis
emb|CAB13526.1| (Z99112) similar to hypothetical proteins [Bacillus subtilis]
Length = 260
Score = 177 bits (450), Expect = 6e-44
Identities = 96/226 (42%), Positives = 131/226 (57%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK ++ R GH +G+K +K T ++ LTLYAFSTENWKRP
Sbjct: 33 EHIAIIMDGNGRWAKKRSLPRIAGHHEGMKVVKRTTKLANELGVKVLTLYAFSTENWKRP 92
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EVDFLMK+ +++L + N++ R IGD I + DT
Sbjct: 93 KMEVDFLMKLPEEFLNTYLPELVEENVQVRIIGDETALPAHTLRAIEKAVQDTAQNDGMI 152
Query: 126 QVLALNYGSKNELSRAFKSLLES-PPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
ALNYG + E+ A KSL E +N+ + E+ S L T L + +LL+RT GE
Sbjct: 153 LNFALNYGGRTEIVSAAKSLAEKVKEGSLNIEDIDESLFSTYLMTESLQDPELLIRTSGE 212
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
+RLSNF+LWQ +Y+E FT +LWPDF + +F +R R+FG
Sbjct: 213 IRLSNFMLWQVAYSEFVFTDVLWPDFKEDHFLQALGEFQQRGRRFG 258
>emb|CAD24431.1| (AJ431698) undecaprenyl-diphosphate synthase [Paracoccus
zeaxanthinifaciens]
Length = 245
Score = 177 bits (449), Expect = 8e-44
Identities = 91/225 (40%), Positives = 137/225 (60%), Gaps = 1/225 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWA + R GH++G + +K I C ++ LT+YAFSTENWKR
Sbjct: 20 RHVAIIMDGNGRWATERGWPRLVGHRRGAERVKQIVRACPELGVDWLTIYAFSTENWKRS 79
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV LMK+ ++Y++ E + +R R IG E ++L+D + +E T
Sbjct: 80 TEEVLGLMKIFRRYIEREAVGMASEGVRMRFIGGRERLDRKLQDLMASIEARTAGNTRLN 139
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEM 185
+A+NYG ++EL+RA L + + E ++++ +DT P+ DL++RT GE
Sbjct: 140 LTVAINYGGRDELTRASTRLARKIAAG-EIETPTEADLADCMDTAGHPDPDLVIRTSGET 198
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R SNFL WQ++Y+E FTP LWPDFTP+ L +I+ ++ R R+FG
Sbjct: 199 RTSNFLPWQAAYSEYEFTPTLWPDFTPQHLSDILGNYGMRDRRFG 243
>ref|NP_442758.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|Q55482|UPPS_SYNY3 Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||S75982 hypothetical protein sll0506 - Synechocystis sp. (strain PCC 6803)
dbj|BAA10829.1| (D64006) ORF_ID:sll0506~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 249
Score = 177 bits (449), Expect = 8e-44
Identities = 89/228 (39%), Positives = 136/228 (59%), Gaps = 1/228 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A+IMDGNGRWAK + R GH++GV +LK++ C + + LT YAFSTENW RP
Sbjct: 22 QHVAVIMDGNGRWAKQRGMPRIMGHQRGVDSLKNLLRCCDDWGIAALTAYAFSTENWGRP 81
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV+FLM + ++ L+ E + N+R R +G+L + L+D I + DT++
Sbjct: 82 LEEVEFLMTLFERVLRRELKEMMAENVRIRFVGNLTSLPRSLQDEIARSMEDTKNNTGIR 141
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDTHDLPEVDLLLRTGGE 184
+A NYG + E+ +++ S E++ E + L T L DLL+RT GE
Sbjct: 142 FTVATNYGGRQEIVHVCQAIAREVQSGKLDPETIDEGVVEKYLYTEGLSHPDLLIRTSGE 201
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
+R+SNFLLWQ +YAE++ T LWPDF + + D+ +R R+FG++
Sbjct: 202 LRISNFLLWQMAYAEIYVTSTLWPDFDRQAFHLALRDYQQRHRRFGKV 249
>ref|NP_269937.1| (NC_002737) putative undecaprenyl pyrophosphate synthetase
[Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS]
gb|AAK34658.1| (AE006619) putative undecaprenyl pyrophosphate synthetase
[Streptococcus pyogenes M1 GAS]
Length = 249
Score = 176 bits (446), Expect = 2e-43
Identities = 90/232 (38%), Positives = 140/232 (59%), Gaps = 5/232 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+ IIMDGNGRWAK + K R +GHK G+ L+++TI + ++ LT+YAFSTENW RP
Sbjct: 18 KHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENWSRP 77
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EV F+M + + NN++ + IG+ ++ + + T+
Sbjct: 78 QDEVSFIMNLPVTFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNTGLI 137
Query: 126 QVLALNYGSKNELSRAFKSLLESP-PSHINLLESLENEISNRLDTHDLP----EVDLLLR 180
ALNYG + E++ A + + + + +N + E+ I+N L T LP + DL++R
Sbjct: 138 LNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDLIIR 197
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
T GE+RLSNFL WQS+Y+E +FTP+LWPDF +L I+D+ +R R+FG++
Sbjct: 198 TSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFGKV 249
>ref|NP_608011.1| (NC_003485) putative undecaprenyl pyrophosphate synthetase
[Streptococcus pyogenes MGAS8232]
gb|AAL98510.1| (AE010106) putative undecaprenyl pyrophosphate synthetase
[Streptococcus pyogenes MGAS8232]
Length = 249
Score = 176 bits (446), Expect = 2e-43
Identities = 90/232 (38%), Positives = 140/232 (59%), Gaps = 5/232 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+ IIMDGNGRWAK + K R +GHK G+ L+++TI + ++ LT+YAFSTENW RP
Sbjct: 18 KHIGIIMDGNGRWAKKRLKPRVFGHKAGMDALQEVTITASELGVKVLTVYAFSTENWSRP 77
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EV F+M + + NN++ + IG+ ++ + + T+
Sbjct: 78 QDEVSFIMNLPVAFFDKYVPVLHENNVKIQMIGETSRLPEDTLAALNAAIDKTKRNTGLI 137
Query: 126 QVLALNYGSKNELSRAFKSLLESP-PSHINLLESLENEISNRLDTHDLP----EVDLLLR 180
ALNYG + E++ A + + + + +N + E+ I+N L T LP + DL++R
Sbjct: 138 LNFALNYGGRAEITSAVRFIAQDVLDAKLNPGDITEDLIANYLMTDHLPYLYRDPDLIIR 197
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
T GE+RLSNFL WQS+Y+E +FTP+LWPDF +L I+D+ +R R+FG++
Sbjct: 198 TSGELRLSNFLPWQSAYSEFYFTPVLWPDFKKAELLKAIADYNRRQRRFGKV 249
>ref|NP_220806.1| (NC_000963) unknown [Rickettsia prowazekii]
sp|Q9ZDA7|UPPS_RICPR Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||H71700 hypothetical protein RP425 - Rickettsia prowazekii
emb|CAA14882.1| (AJ235271) unknown [Rickettsia prowazekii]
Length = 226
Score = 175 bits (444), Expect = 3e-43
Identities = 90/228 (39%), Positives = 134/228 (58%), Gaps = 5/228 (2%)
Query: 4 TLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWK 63
T+KHLAIIMDGN RWA N ++ GHK G ++++ N + +TLY FS ENW+
Sbjct: 3 TIKHLAIIMDGNARWADRHNLTKSEGHKAGADKIRELLPEFINLNIPYITLYTFSFENWQ 62
Query: 64 RPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
R SEVDFL+K+L YLK+E + N ++ + IG L L+ I T++
Sbjct: 63 RSSSEVDFLIKLLSIYLKNELDSLHENGVKIKVIGRLNLLRSSLQKQINNAIELTKNNNK 122
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGG 183
+A +YGS+ E+ A ++ ++ E +I + L ++P+VDLL+R+GG
Sbjct: 123 IKLCIAFSYGSRQEIVDACTKIIAHGKKQVS-----EYDIQHALYDPEMPDVDLLIRSGG 177
Query: 184 EMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
R+SNFLLWQ++YAEL+F+ WPDF D+ I+D+ KR R FG+
Sbjct: 178 VYRISNFLLWQAAYAELYFSQKYWPDFNKDDIHEAINDYSKRKRTFGK 225
>ref|NP_464840.1| (NC_003210) similar to undecaprenyl diphosphate synthase [Listeria
monocytogenes EGD-e]
emb|CAC99393.1| (AL591978) similar to undecaprenyl diphosphate synthase [Listeria
monocytogenes]
Length = 252
Score = 173 bits (438), Expect = 2e-42
Identities = 91/228 (39%), Positives = 132/228 (56%), Gaps = 1/228 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWAK + R GHK+G+ +K +T + ++ LTLYAFSTENWKRP
Sbjct: 25 RHVAIIMDGNGRWAKKRFLPRIAGHKEGMDVVKRVTRYANAIGIDVLTLYAFSTENWKRP 84
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EVDFLMK+ ++ + N+R +G E + + DT H T
Sbjct: 85 TDEVDFLMKLPVEFFDSFVPELIEENVRVNVMGYRENLPDHTMRAVEKAIADTAHCTGLT 144
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDTHDLPEVDLLLRTGGE 184
ALNYG ++E+ A K ++ + L E ++++ L + L + DLL+RT GE
Sbjct: 145 LNFALNYGGRSEIITAAKEAMKELELEGKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGE 204
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
+RLSNF+LWQ +Y+E +FT WPDF+ +D I ++ R R+FG L
Sbjct: 205 LRLSNFMLWQLAYSEFYFTDTHWPDFSKEDFLQAIIEYQNRSRRFGGL 252
>ref|NP_371784.1| (NC_002758) undecaprenyl pyrophosphatase synthetase [Staphylococcus
aureus subsp. aureus Mu50]
ref|NP_374376.1| (NC_002745) undecaprenyl pyrophosphatase synthetase [Staphylococcus
aureus subsp. aureus N315]
dbj|BAB42355.1| (AP003133) undecaprenyl pyrophosphatase synthetase [Staphylococcus
aureus subsp. aureus N315]
dbj|BAB57422.1| (AP003361) undecaprenyl pyrophosphatase synthetase [Staphylococcus
aureus subsp. aureus Mu50]
Length = 256
Score = 172 bits (435), Expect = 4e-42
Identities = 92/231 (39%), Positives = 133/231 (56%), Gaps = 1/231 (0%)
Query: 3 NTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
N +H+AIIMDGNGRWAK + R GH +G++T+K IT ++ ++ LTLYAFSTENW
Sbjct: 23 NIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRIASDIGVKYLTLYAFSTENW 82
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
RP+SEV+++M + +LK + N++ IG + K + I + T +
Sbjct: 83 SRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNT 142
Query: 123 DFTQVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLRT 181
+ A+NYG + EL + K++ E +N E I+N L T D P+ +LL+RT
Sbjct: 143 GLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRT 202
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
GE R+SNFL+WQ SY+E F LWPDF +L I + R R+FG L
Sbjct: 203 SGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGL 253
>ref|NP_645960.1| (NC_003923) undecaprenyl pyrophosphatase synthetase [Staphylococcus
aureus subsp. aureus MW2]
dbj|BAB95008.1| (AP004826) undecaprenyl pyrophosphatase synthetase [Staphylococcus
aureus subsp. aureus MW2]
Length = 256
Score = 172 bits (435), Expect = 4e-42
Identities = 92/231 (39%), Positives = 133/231 (56%), Gaps = 1/231 (0%)
Query: 3 NTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
N +H+AIIMDGNGRWAK + R GH +G++T+K IT ++ ++ LTLYAFSTENW
Sbjct: 23 NIPEHIAIIMDGNGRWAKKRKMPRIKGHYEGMQTIKKITRVASDIGVKYLTLYAFSTENW 82
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
RP+SEV+++M + +LK + N++ IG + K + I + T +
Sbjct: 83 SRPESEVNYIMNLPVNFLKTFLPELIEKNVKVETIGFTDKLPKSTIEAINNAKEKTANNT 142
Query: 123 DFTQVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLRT 181
+ A+NYG + EL + K++ E +N E I+N L T D P+ +LL+RT
Sbjct: 143 GLKLIFAINYGGRAELVHSIKNMFDELHQQGLNSDIIDETYINNHLMTKDYPDPELLIRT 202
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
GE R+SNFL+WQ SY+E F LWPDF +L I + R R+FG L
Sbjct: 203 SGEQRISNFLIWQVSYSEFIFNQKLWPDFDEDELIKCIKIYQSRQRRFGGL 253
>ref|NP_200685.1| (NM_125264) dehydrodolichyl diphosphate - like protein [Arabidopsis
thaliana]
dbj|BAA97345.1| (AB020755) contains similarity to unknown
protein~gb|AAF22257.1~gene_id:MZN1.21 [Arabidopsis
thaliana]
Length = 310
Score = 170 bits (431), Expect = 1e-41
Identities = 92/231 (39%), Positives = 131/231 (55%), Gaps = 3/231 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+AIIMDGNGRWAK + GH+ GV+ LK+I C ++ LT++AFST+NW RP
Sbjct: 79 KHVAIIMDGNGRWAKNRGLQPWDGHRAGVEALKEIVELCGKWGIQVLTVFAFSTDNWIRP 138
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ E+DFL + ++ LK E NN+R IGD K L I ++E T++
Sbjct: 139 RIEIDFLFSLFERSLKTEFQNLAKNNVRISIIGDSSKLPKSLLRVINEVEEVTKNNTRLQ 198
Query: 126 QVLALNYGSKNELSRAFKSLLES-PPSHINLLESLENEISNRLDTH--DLPEVDLLLRTG 182
++A+ Y K ++ +A + + I + E E I L+T+ + P DLL+RT
Sbjct: 199 LIVAVGYSGKYDVLQACRGIARRVKDGEIEVEEIDERLIEEELETNCTEFPYPDLLIRTS 258
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
GE+R+SNFLLWQ +Y ELFF LWPDF + F +R R+FG K
Sbjct: 259 GELRVSNFLLWQLAYTELFFAQELWPDFGRSGFIEALMSFQQRQRRFGGRK 309
>dbj|BAB63702.1| (AP003289) putative undecaprenyl pyrophosphate synthetase (UPP
synthetase) [Oryza sativa (japonica cultivar-group)]
Length = 295
Score = 170 bits (431), Expect = 1e-41
Identities = 87/233 (37%), Positives = 128/233 (54%), Gaps = 5/233 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A++MDGN RWA+ + A GH+ G + L++ + LT +AFS ENW RP
Sbjct: 62 RHVAVVMDGNARWARARGLPSAAGHEAGRRALEETVRLSRAWGIRALTAFAFSNENWSRP 121
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EVDFLM++ ++ + D + +L IR R IGD L+ + E TR+
Sbjct: 122 KVEVDFLMRLFERVIHDSVAEFLREGIRLRVIGDSSRLPVSLQKIAREAEETTRNNSQLD 181
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLE-----NEISNRLDTHDLPEVDLLLR 180
LA++Y + ++ +A + L + S E ++ +E+ + P DLL+R
Sbjct: 182 LTLAISYSGRRDIVQACRKLAQKVQSKALAAEDIDEALFADELETSCAADEFPYPDLLIR 241
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
T GE+RLSNFLLWQS+Y+ELFFT LWPDF D + F R R+FG K
Sbjct: 242 TSGELRLSNFLLWQSAYSELFFTNTLWPDFGEADYLEALCSFQSRDRRFGVRK 294
>ref|NP_212254.1| (NC_001318) conserved hypothetical protein [Borrelia burgdorferi]
sp|O51146|UPPS_BORBU Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||H70114 conserved hypothetical protein BB0120 - Lyme disease spirochete
gb|AAC66517.1| (AE001124) conserved hypothetical protein [Borrelia burgdorferi]
Length = 230
Score = 169 bits (429), Expect = 2e-41
Identities = 90/225 (40%), Positives = 135/225 (60%), Gaps = 5/225 (2%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+ IIMDGN RWA K + G+K+G+K K+I + ++CL+ Y FSTENW+R
Sbjct: 9 HVGIIMDGNRRWALGKRLSSLEGYKEGLKRAKEIVKYSLRVGIKCLSFYVFSTENWRRDD 68
Query: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
E++ LM ++ YL+ E Y N I+ GD+E S E++ +I + +++F +
Sbjct: 69 CEIENLMFLIANYLRAEFDFYEKNGIKIIVSGDVESLSGEVKSSIKDSISFSKNFNNLIL 128
Query: 127 VLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDTHDLPEVDLLLRTGGEM 185
LA+NYG +NE+ RA K + S LESL EN S+ LD +LP++DLL+RTGG +
Sbjct: 129 NLAINYGGRNEILRAVKKFVSSDFD----LESLNENIFSSFLDNPELPDLDLLIRTGGNI 184
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNF LW+ +Y+EL F+ +LWP++ + F R R FG
Sbjct: 185 RISNFFLWRIAYSELIFSNVLWPEYYDTRYSKDLECFQFRRRNFG 229
>ref|NP_444734.1| (NC_002179) undecaprenyl pyrophosphate synthetase [Chlamydophila
pneumoniae AR39]
pir||H81604 undecaprenyl pyrophosphate synthetase CP0183 [imported] -
Chlamydophila pneumoniae (strain AR39)
gb|AAF38056.1| (AE002179) undecaprenyl pyrophosphate synthetase [Chlamydophila
pneumoniae AR39]
Length = 261
Score = 169 bits (428), Expect = 2e-41
Identities = 102/233 (43%), Positives = 133/233 (56%), Gaps = 11/233 (4%)
Query: 7 HLAIIMDGNGRWAKLKNKARAY----GHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
H+AIIMDGN RW K + + GH G K L +I + ++ LTLY FSTEN+
Sbjct: 32 HVAIIMDGNRRWYKKHREECGHTHTSGHYYGAKVLPNILNAVLDLGIKVLTLYTFSTENF 91
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
RPK E+ + + L + + N I R IGDL K ++ I + T F
Sbjct: 92 GRPKEEIQEIFNIFYTQLDKQLPYLMENEICLRCIGDLSKLPKGIQTKINHVSRMTASFS 151
Query: 123 DFTQVLALNYGSKNELSRAFKSL----LESPPSHINLLESLENEISNRLDTHDLPEVDLL 178
VLA+NYG K+EL RAFK L L S +L ESL IS+ LDT L + DLL
Sbjct: 152 RLELVLAVNYGGKDELVRAFKKLHVDILNKKISSDDLSESL---ISSYLDTSGLTDPDLL 208
Query: 179 LRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
+RTGGEMR+SNFLLWQ +Y EL+ T LWPDFTP+DL I+ + +R R+ G+
Sbjct: 209 IRTGGEMRVSNFLLWQIAYTELYITDTLWPDFTPQDLFEAINVYQQRSRRGGK 261
>ref|NP_143446.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
sp|O59258|UPPS_PYRHO Probable undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||F71037 hypothetical protein PH1590 - Pyrococcus horikoshii
dbj|BAA30702.1| (AP000006) 264aa long hypothetical protein [Pyrococcus horikoshii]
Length = 264
Score = 169 bits (428), Expect = 2e-41
Identities = 92/228 (40%), Positives = 136/228 (59%), Gaps = 3/228 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+AIIMDGN RWA+ K YGH G K L++I WC + LT+YAFSTEN+KR
Sbjct: 36 KHVAIIMDGNRRWARKHEKPPWYGHLFGSKKLEEILEWCHELGIRILTVYAFSTENFKRS 95
Query: 66 KSEVDFLMKMLKKYLKD--ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
K EVD LMK+ ++ ++ +R IG E K +RD + + E TR + +
Sbjct: 96 KEEVDRLMKLFEEKFRELVTDKRVHEYGVRVNVIGRKELLPKSVRDAVEEAERATRKYNN 155
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRTG 182
+ +AL YG ++E+ A K + S +E ++ E+ R L ++P+ D+++RTG
Sbjct: 156 YILNVALAYGGRSEIVDAVKDIARDVISGKLRIEEIDEELLRRYLYVPNMPDPDIVIRTG 215
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE+R+SNFLL+Q +Y+ELFF + +P+F D II +F KR R+FG
Sbjct: 216 GEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRERRFG 263
>ref|NP_224762.1| (NC_000922) YaeS family hypothetical protein [Chlamydophila
pneumoniae CWL029]
ref|NP_300621.1| (NC_002491) YaeS family hypothetical protein [Chlamydophila
pneumoniae J138]
sp|Q9Z7Y7|UPPS_CHLPN Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||G72062 yaes family hypothetical protein - Chlamydophila pneumoniae
(strain CWL029)
gb|AAD18706.1| (AE001641) YaeS family hypothetical protein [Chlamydophila
pneumoniae CWL029]
dbj|BAA98772.1| (AP002547) YaeS family hypothetical protein [Chlamydophila
pneumoniae J138]
Length = 250
Score = 169 bits (428), Expect = 2e-41
Identities = 102/233 (43%), Positives = 133/233 (56%), Gaps = 11/233 (4%)
Query: 7 HLAIIMDGNGRWAKLKNKARAY----GHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
H+AIIMDGN RW K + + GH G K L +I + ++ LTLY FSTEN+
Sbjct: 21 HVAIIMDGNRRWYKKHREECGHTHTSGHYYGAKVLPNILNAVLDLGIKVLTLYTFSTENF 80
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
RPK E+ + + L + + N I R IGDL K ++ I + T F
Sbjct: 81 GRPKEEIQEIFNIFYTQLDKQLPYLMENEICLRCIGDLSKLPKGIQTKINHVSRMTASFS 140
Query: 123 DFTQVLALNYGSKNELSRAFKSL----LESPPSHINLLESLENEISNRLDTHDLPEVDLL 178
VLA+NYG K+EL RAFK L L S +L ESL IS+ LDT L + DLL
Sbjct: 141 RLELVLAVNYGGKDELVRAFKKLHVDILNKKISSDDLSESL---ISSYLDTSGLTDPDLL 197
Query: 179 LRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
+RTGGEMR+SNFLLWQ +Y EL+ T LWPDFTP+DL I+ + +R R+ G+
Sbjct: 198 IRTGGEMRVSNFLLWQIAYTELYITDTLWPDFTPQDLFEAINVYQQRSRRGGK 250
>ref|NP_641752.1| (NC_003919) undecaprenyl pyrophosphate synthetase [Xanthomonas
axonopodis pv. citri str. 306]
gb|AAM36288.1| (AE011773) undecaprenyl pyrophosphate synthetase [Xanthomonas
axonopodis pv. citri str. 306]
Length = 257
Score = 169 bits (427), Expect = 3e-41
Identities = 87/226 (38%), Positives = 129/226 (56%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWA+ + + R GH+ G + + +C + LTL+AFS+ENW RP
Sbjct: 16 RHIAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLEKGVSALTLFAFSSENWGRP 75
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EVD LMK+ L E ++ R IGD F+ LRD + E T
Sbjct: 76 QDEVDALMKLFLHALDREVEELQRRGVQVRFIGDRSRFAAPLRDRMAGAERSTAANSRLV 135
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRTGGE 184
+A +YG + +++ A ++L E + E ++ +S+R+ DLP DL +RTGG+
Sbjct: 136 LSIAASYGGRQDIASAARALAEDVAAGRLQPEQIDEALLSSRVALADLPAPDLFIRTGGD 195
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +Y EL+FT LWP+F L+ + D+ R R+FG
Sbjct: 196 TRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFG 241
>gb|AAD29658.1|AF124757_18 (AF124757) unknown [Zymomonas mobilis]
Length = 222
Score = 168 bits (425), Expect = 5e-41
Identities = 93/222 (41%), Positives = 128/222 (56%), Gaps = 1/222 (0%)
Query: 12 MDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDF 71
MDGNGRWA ++ R GHKKG +K A +E LTLYAFS+ENW+RP SEV
Sbjct: 1 MDGNGRWASARHLPRIAGHKKGADAVKTTVRAAAEMGIEVLTLYAFSSENWRRPASEVAD 60
Query: 72 LMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQVLALN 131
LM +L+ L+ E I + IGD ++L + Q T + T V ALN
Sbjct: 61 LMGLLRLCLRQEMHNIKERGICLKVIGDYTRLDQDLVALLNQAIEITANNTRLTLVFALN 120
Query: 132 YGSKNELSRAFKSLLESPPSHINLLESLE-NEISNRLDTHDLPEVDLLLRTGGEMRLSNF 190
YG+++EL K + E E+++ I + L THDLP +DL++RT GE RLSNF
Sbjct: 121 YGAQDELVHVTKRIAEKAKEGQLDPENIDVGTIESLLYTHDLPPLDLVIRTSGEKRLSNF 180
Query: 191 LLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
LLWQ++YAEL F LWPDF + L+ + ++ +R R++G L
Sbjct: 181 LLWQAAYAELLFIDTLWPDFGSETLKAAVEEYARRERRYGGL 222
>ref|NP_579328.1| (NC_003413) undecaprenyl diphosphate synthase [Pyrococcus furiosus
DSM 3638]
gb|AAL81723.1| (AE010260) undecaprenyl diphosphate synthase [Pyrococcus furiosus
DSM 3638]
Length = 264
Score = 166 bits (421), Expect = 1e-40
Identities = 92/229 (40%), Positives = 138/229 (60%), Gaps = 5/229 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+AIIMDGN RWA+ + K YGH G K L++I WC + LT+YAFSTEN+KR
Sbjct: 36 KHVAIIMDGNRRWARKREKPPWYGHFFGSKKLEEIVEWCHELGIRILTVYAFSTENFKRS 95
Query: 66 KSEVDFLMKMLKKYLKD---ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
K EVD LMK+ ++ ++ +R + IR +G E K +R+ + E TR +
Sbjct: 96 KEEVDRLMKLFEEKFRELVTDRRVH-EYGIRVNVMGRKELLPKNVREAAEEAERVTRKYN 154
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRT 181
++ +AL YG ++E+ A K ++ LE + EI + L ++P+ D+++RT
Sbjct: 155 NYFLNIALAYGGRSEIVDAIKDIVNDVLEGRLKLEDINEEIVRKYLYVPNMPDPDIVIRT 214
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GGE+R+SNFLL+Q +Y+ELFF + +P+F D II +F KR R+FG
Sbjct: 215 GGEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRERRFG 263
>ref|NP_111119.1| (NC_002689) Undecaprenyl pyrophosphate synthase [Thermoplasma
volcanium]
dbj|BAB59742.1| (AP000992) hypothetical protein [Thermoplasma volcanium]
Length = 258
Score = 166 bits (420), Expect = 2e-40
Identities = 89/230 (38%), Positives = 136/230 (58%), Gaps = 7/230 (3%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+ II DGN R+A++ GH KG ++++ WC ++ +T YAFSTEN+KR
Sbjct: 30 RHVGIITDGNRRYARIVGIPENEGHVKGKNKVEEVLDWCMELDIKIVTFYAFSTENFKRS 89
Query: 66 KSEVDFLMKMLK----KYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
EVDFL ++ LKDER N I + IG++ + LR+TI E T++F
Sbjct: 90 PEEVDFLFHLINDAFISLLKDER--VYKNKINVKVIGNVSMLPEYLRETIKITEETTKNF 147
Query: 122 KDFTQVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
++ LA+ YG + E+ A K + ++ IN+ E E++ N L +LP+ DL+LR
Sbjct: 148 SNYHMNLAIGYGGREEILDAIKRIARDAIAGKINVDEIDESKFRNYLYDGNLPDPDLILR 207
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
T GE R+SNFLLWQS+Y+EL+F+ + WP+F+ D I + +R R+FG
Sbjct: 208 TSGEERISNFLLWQSAYSELYFSDVYWPEFSKLDFLRAIYSYQRRQRRFG 257
>ref|NP_357834.1| (NC_003098) Undecaprenyl diphosphate synthase [Streptococcus
pneumoniae R6]
gb|AAK99044.1| (AE008405) Undecaprenyl diphosphate synthase [Streptococcus
pneumoniae R6]
Length = 258
Score = 166 bits (419), Expect = 3e-40
Identities = 88/229 (38%), Positives = 135/229 (58%), Gaps = 5/229 (2%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+ IIMDGNGRWAK + + R +GHK G++ L+ +T ++ +T+YAFSTENW RP
Sbjct: 28 HIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFSTENWTRPD 87
Query: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
EV F+M + ++ + NN++ + IG+ + K+ + + + E T++
Sbjct: 88 QEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTKNNTGLIL 147
Query: 127 VLALNYGSKNELSRAFKSLLESP-PSHINLLESLENEISNRLDTHDLP----EVDLLLRT 181
ALNYG + E+++A K + + + IN + E I N L T LP + DL++RT
Sbjct: 148 NFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRDPDLIIRT 207
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE+RLSNFL WQ +Y+EL+FT LWPDF L+ I + +R R+FG
Sbjct: 208 SGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFG 256
>sp|Q9ZEJ7|UPPS_ANAVA Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
emb|CAA10743.1| (AJ132706) hypothetical protein [Anabaena variabilis]
Length = 251
Score = 166 bits (419), Expect = 3e-40
Identities = 83/227 (36%), Positives = 135/227 (58%), Gaps = 2/227 (0%)
Query: 8 LAIIMDGNGR-WAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
L +IMDGNGR ++ R GHK+GV LKD+ C + ++ LT YAFSTENWKRP+
Sbjct: 25 LTVIMDGNGRDGLNVQGLPRIMGHKRGVDALKDLLRCCRDWGIQALTAYAFSTENWKRPQ 84
Query: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
EV+FLM + ++ L+ E + N++ + +G+L + L+ I + T++ +
Sbjct: 85 EEVEFLMTLFQRVLRQELREMVEENVQIQFVGNLAALPRSLQAEISRSMEATKNNRGIRF 144
Query: 127 VLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRTGGEM 185
+A NYG + E+ +A +++ + + + ++ E+ R L T + + DLL+RT GEM
Sbjct: 145 SVATNYGGRQEILQACRAIAQKVQQGLLQPDEIDEEVFERHLYTAGIADPDLLIRTSGEM 204
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGEL 232
RLSNFLLWQ +Y E++ T LWPDF + + + +R R+FG++
Sbjct: 205 RLSNFLLWQMAYGEIYITDTLWPDFDRTEFHRALCAYQQRERRFGKV 251
>ref|NP_344799.1| (NC_003028) undecaprenyl diphosphate synthase [Streptococcus
pneumoniae TIGR4]
gb|AAK74439.1| (AE007339) undecaprenyl diphosphate synthase [Streptococcus
pneumoniae TIGR4]
Length = 252
Score = 166 bits (419), Expect = 3e-40
Identities = 88/229 (38%), Positives = 135/229 (58%), Gaps = 5/229 (2%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+ IIMDGNGRWAK + + R +GHK G++ L+ +T ++ +T+YAFSTENW RP
Sbjct: 22 HIGIIMDGNGRWAKKRMQPRVFGHKAGMEALQTVTKAANKLGVKVITVYAFSTENWTRPD 81
Query: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
EV F+M + ++ + NN++ + IG+ + K+ + + + E T++
Sbjct: 82 QEVKFIMNLPVEFYDNYVPELHANNVKIQMIGETDRLPKQTFEALTKAEELTKNNTGLIL 141
Query: 127 VLALNYGSKNELSRAFKSLLESP-PSHINLLESLENEISNRLDTHDLP----EVDLLLRT 181
ALNYG + E+++A K + + + IN + E I N L T LP + DL++RT
Sbjct: 142 NFALNYGGRAEITQALKLISQDVLDAKINPGDITEELIGNYLFTQHLPKDLRDPDLIIRT 201
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE+RLSNFL WQ +Y+EL+FT LWPDF L+ I + +R R+FG
Sbjct: 202 SGELRLSNFLPWQGAYSELYFTDTLWPDFDEAALQEAILAYNRRHRRFG 250
>ref|NP_126263.1| (NC_000868) conserved hypothetical protein [Pyrococcus abyssi]
sp|Q9V157|UPPS_PYRAB Probable undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||G75176 conserved hypothetical protein PAB0394 - Pyrococcus abyssi (strain
Orsay)
emb|CAB49494.1| (AJ248284) conserved hypothetical protein [Pyrococcus abyssi]
Length = 264
Score = 164 bits (416), Expect = 6e-40
Identities = 88/228 (38%), Positives = 136/228 (59%), Gaps = 3/228 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+AIIMDGN RWAK + K YGH G K L++I WC + LT+YAFSTEN+KR
Sbjct: 36 KHVAIIMDGNRRWAKKREKPPWYGHLFGSKKLEEILEWCHELGIRILTVYAFSTENFKRS 95
Query: 66 KSEVDFLMKMLKKYLKD--ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
K EV+ LM++ ++ ++ +R IG E K +RD + E TR + +
Sbjct: 96 KEEVERLMQLFEQKFRELVTDKRVHEYGVRVNVIGRKELLPKSVRDAAEEAERATRKYNN 155
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRTG 182
+ +A+ YG ++E+ A K ++ +E ++ E+ + L ++P+ D+++RTG
Sbjct: 156 YVLNVAIAYGGRSEIVDAVKDIVRDVMDGKLRVEDIDEELLKKYLYVPNMPDPDIVIRTG 215
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE+R+SNFLL+Q +Y+ELFF + +P+F D II +F KR R+FG
Sbjct: 216 GEVRISNFLLYQIAYSELFFVDVYFPEFRKIDFLRIIREFQKRERRFG 263
>ref|NP_252342.1| (NC_002516) undecaprenyl pyrophosphate synthetase [Pseudomonas
aeruginosa]
pir||G83188 undecaprenyl pyrophosphate synthetase PA3652 [imported] -
Pseudomonas aeruginosa (strain PAO1)
gb|AAG07040.1|AE004785_4 (AE004785) undecaprenyl pyrophosphate synthetase [Pseudomonas
aeruginosa]
Length = 251
Score = 164 bits (415), Expect = 7e-40
Identities = 93/227 (40%), Positives = 129/227 (55%), Gaps = 1/227 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGN RWAK + GHK GV ++ + CA +E LTL+AFS+ENW+RP
Sbjct: 12 RHVAIIMDGNNRWAKKRLLPGVAGHKAGVDAVRAVIEVCAEAGVEVLTLFAFSSENWQRP 71
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV LM++ L+ E N IR R IGD F EL+ + + E T F
Sbjct: 72 ADEVSALMELFLVALRREVRKLDENGIRLRIIGDRTRFHPELQAAMREAEAATAGNTRFL 131
Query: 126 QVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
+A NYG + ++ +A + L E H+ + + L T D P DL +RTGGE
Sbjct: 132 LQVAANYGGQWDIVQAAQRLAREVQGGHLAADDISAELLQGCLVTGDQPLPDLCIRTGGE 191
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
R+SNFLLWQ +YAEL+F+ + WPDF + ++DF KR R+FG+
Sbjct: 192 HRISNFLLWQLAYAELYFSDLFWPDFKHAAMRAALADFSKRQRRFGK 238
>ref|NP_420726.1| (NC_002696) undecaprenyl diphosphate synthase [Caulobacter
crescentus CB15]
gb|AAK23894.1| (AE005865) undecaprenyl diphosphate synthase [Caulobacter
crescentus CB15]
Length = 259
Score = 164 bits (414), Expect = 1e-39
Identities = 88/227 (38%), Positives = 125/227 (54%), Gaps = 5/227 (2%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+AIIMDGNGRWAK + R GH+ GV LK + + LT++ FSTENW RP
Sbjct: 24 HVAIIMDGNGRWAKQRGMPRVLGHRAGVNALKRTVEGAQSQNVGVLTVFGFSTENWSRPP 83
Query: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
EV LM +LK Y++ + +R R IG G S ++ + I + E T +F
Sbjct: 84 QEVSELMGLLKAYVESDLERLAKAGVRVRIIGRRTGLSPDIAEVIERAERRTAQNSEFVL 143
Query: 127 VLALNYGSKNEL---SRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGG 183
+A NYG + ++ +RAF +E + + L E L T P DL++RT G
Sbjct: 144 QVAFNYGGQADITDAARAFAERVERGEAKASDLN--EKTFEQFLSTASAPPPDLIVRTSG 201
Query: 184 EMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
E R+SNFLLW +YAEL F +LWPD+ P+ L I+++ R R++G
Sbjct: 202 ERRISNFLLWDCAYAELVFQDVLWPDYGPEALAAAIAEYRGRDRRYG 248
>ref|NP_636743.1| (NC_003902) undecaprenyl pyrophosphate synthetase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gb|AAM40667.1| (AE012236) undecaprenyl pyrophosphate synthetase [Xanthomonas
campestris pv. campestris str. ATCC 33913]
Length = 258
Score = 163 bits (413), Expect = 1e-39
Identities = 86/226 (38%), Positives = 129/226 (57%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+HLAIIMDGNGRWA+ + + R GH+ G + + +C + + LTL+AFS+ENW RP
Sbjct: 17 RHLAIIMDGNGRWAQRRRRPRVIGHRAGARAVNRTIDFCLDKGVSALTLFAFSSENWGRP 76
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EVD LMK+ L ++ R IGD F+ LRD + E T
Sbjct: 77 QDEVDALMKLFLHALDRGVEELQRRGVQVRFIGDRSRFTAPLRDRMAGAERITAANTRLV 136
Query: 126 QVLALNYGSKNELSRAFKSL-LESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
+A +YG + +++ A ++L +E + + E +++R+ DLP DL +RTGG+
Sbjct: 137 LSIAASYGGRQDIAMAARALAVEVAAGRLQPEQIDEALLASRVALADLPAPDLFIRTGGD 196
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFLLWQ +Y EL+FT LWP+F L+ + D+ R R+FG
Sbjct: 197 TRISNFLLWQLAYTELWFTETLWPEFDAGVLQQALDDYAGRERRFG 242
>ref|NP_519529.1| (NC_003295) PROBABLE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE PROTEIN
[Ralstonia solanacearum]
emb|CAD15110.1| (AL646064) PROBABLE UNDECAPRENYL PYROPHOSPHATE SYNTHETASE PROTEIN
[Ralstonia solanacearum]
Length = 258
Score = 163 bits (413), Expect = 1e-39
Identities = 88/229 (38%), Positives = 134/229 (58%), Gaps = 3/229 (1%)
Query: 3 NTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHK-LECLTLYAFSTEN 61
+T H+AIIMDGNGRWA ++ R GH +G+ ++ + A+H+ + LTL+AFS+EN
Sbjct: 14 DTPHHVAIIMDGNGRWATERHLPRMAGHSRGLDAVR-AAVQAADHRGVRYLTLFAFSSEN 72
Query: 62 WKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
W+RP E+ FLMK+ L+ E S ++ IR R +GDL FS ++ I + E T
Sbjct: 73 WRRPAEEISFLMKLFMTALRREVSKLNDSGIRLRVVGDLSAFSPRIQLMIREAEAKTATN 132
Query: 122 KDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRT 181
T +A NYG + ++ +A ++L+ P I E +S + E DL +RT
Sbjct: 133 PGLTVTIAANYGGRWDILQAMRALVADQPD-IAPEAITEEALSPYMALAYASEPDLFIRT 191
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GGE R+SNF+LWQ +Y+EL+FT WPDF +++ + + R R+FG
Sbjct: 192 GGEQRISNFMLWQLAYSELYFTERYWPDFDAAEMDRAFAWYRNRERRFG 240
>ref|NP_568882.1| (NM_125265) predicted protein [Arabidopsis thaliana]
gb|AAL91250.1| (AY090344) AT5g58780/mzn1_230 [Arabidopsis thaliana]
Length = 302
Score = 163 bits (412), Expect = 2e-39
Identities = 83/228 (36%), Positives = 129/228 (56%), Gaps = 3/228 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A+IMDGN RWAK + GH+ G K L + + C + ++ +AFSTENW R
Sbjct: 72 RHVAVIMDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWGRH 131
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EV LM +++ YLK + + R IG+L + L T+ ++E TR +K
Sbjct: 132 KIEVKCLMSLIQHYLKSKIQYFQREETRVSVIGNLTKIPESLLRTVQEIEEATRSYKKKH 191
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR---LDTHDLPEVDLLLRTG 182
+LA++Y + ++ RA KS+++ + E ++ + R + + P DLL+RT
Sbjct: 192 LILAIDYSGRLDILRACKSIVKKSEKGLIREEDVDEALIERELLTNCTEFPSPDLLIRTS 251
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE R+SNF LWQ +Y ELFF+P+LWPDF L + + +R R+FG
Sbjct: 252 GEQRISNFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQRRERRFG 299
>ref|NP_248375.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58767|UPPS_METJA Probable undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||C64471 hypothetical protein HI0920 homolog - Methanococcus jannaschii
gb|AAB99380.1| (U67577) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 280
Score = 162 bits (409), Expect = 4e-39
Identities = 92/236 (38%), Positives = 137/236 (57%), Gaps = 7/236 (2%)
Query: 2 DNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTEN 61
DN KH+AIIMDGN R A++ K R YGH G + ++++ W + + +TLYAFSTEN
Sbjct: 46 DNLPKHVAIIMDGNRRAAEIYGKDRYYGHYLGAEKVREVLRWARDLGINVVTLYAFSTEN 105
Query: 62 WKRPKSEVDFLMKMLKK---YLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDT 118
++RPK EVD LM++ +K + D+ + +R RAIG + K ++ I E T
Sbjct: 106 FRRPKEEVDKLMELFEKKFYEIADDEEIH-RYEVRVRAIGRINLLPKNVQKAIKYAEERT 164
Query: 119 RHFKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDL--PEV 175
+++ F +A+ YG + E+ A K + E E ++ E I L T +L P
Sbjct: 165 KNYNKFFVNIAIAYGGQQEIIDAVKKIAEKVKRGEIEPEDIDKELIDKHLYTANLPFPNP 224
Query: 176 DLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
DL++RT GE R+SNFL+WQSSY+EL+F I WP F D + D+ +R R+FG+
Sbjct: 225 DLIIRTSGEERISNFLIWQSSYSELYFCDIYWPLFRRVDFLRAVRDYQRRQRRFGK 280
>ref|NP_275375.1| (NC_000916) conserved protein [Methanothermobacter
thermautotrophicus] [Methanothermobacter
thermautotrophicus str. Delta H]
sp|O26334|UPPS_METTH Probable undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||H69128 conserved hypothetical protein MTH232 - Methanobacterium
thermoautotrophicum (strain Delta H)
gb|AAB84738.1| (AE000810) conserved protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 255
Score = 161 bits (407), Expect = 6e-39
Identities = 90/233 (38%), Positives = 135/233 (57%), Gaps = 4/233 (1%)
Query: 2 DNTLKHLAIIMDGNGRWAKLKNKARAY-GHKKGVKTLKDITIWCANHKLECLTLYAFSTE 60
D +H+AIIMDGN R++KL+ GHKKG++TL+ + WC + +E +T YAFSTE
Sbjct: 22 DRMPRHVAIIMDGNRRYSKLQGSMNPIEGHKKGIETLEKVLDWCVDLGIEIVTAYAFSTE 81
Query: 61 NWKRPKSEVDFLMKMLKKYLKDERSTYL--NNNIRFRAIGDLEGFSKELRDTILQLENDT 118
N+KRP+ EV LMK+ ++ + S N +R RA+G LE +++R I E T
Sbjct: 82 NFKRPEKEVKGLMKLFRENFEAIASNEKIHKNRVRVRAVGKLELLPEDVRRAIEIAEKST 141
Query: 119 RHFKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDL 177
+ D +A+ Y + E+ A + + E + + E ++ ++ NR L T L + L
Sbjct: 142 EQYSDRLVNIAIGYDGRQEIVDATRKIAEDVKAGLIDPEDIDEDMINRNLYTAGLEDPHL 201
Query: 178 LLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
++RT GE RLS FLLWQSSY+EL+F LWP+ D I + +R R+FG
Sbjct: 202 IIRTSGEERLSGFLLWQSSYSELYFCDSLWPELRKVDFLRAIRSYQQRERRFG 254
>ref|NP_394020.1| (NC_002578) conserved hypothetical protein [Thermoplasma
acidophilum]
emb|CAC11686.1| (AL445064) conserved hypothetical protein [Thermoplasma
acidophilum]
Length = 258
Score = 160 bits (405), Expect = 1e-38
Identities = 87/230 (37%), Positives = 133/230 (57%), Gaps = 7/230 (3%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+ II DGN R+A+ + GH KG + ++++ WC + +T YAFSTEN++R
Sbjct: 30 RHIGIITDGNRRYARNVGISENEGHVKGKEKVEEVVDWCMELDIRIVTFYAFSTENFRRS 89
Query: 66 KSEVDFLMKML----KKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
EVDFL ++ K LKDER N I + IG+L LR TI +E T++F
Sbjct: 90 PEEVDFLFHLIDNAFKSLLKDER--VYKNRINVKVIGNLSILPAYLRQTIHIVEETTKNF 147
Query: 122 KDFTQVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
++ LA+ YG + E+ A K + ++ +N+ E E + L +P+ DL+LR
Sbjct: 148 NNYQLNLAIGYGGREEILDAIKRITRDAMDGKLNIDELDEEKFRMYLYDGRIPDPDLILR 207
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
T GE R+SNFLLWQS+Y+EL+F+ + WP+F+ D I + +R R+FG
Sbjct: 208 TSGEERISNFLLWQSAYSELYFSDVYWPEFSKLDFLRAIYSYQRRQRRFG 257
>ref|NP_298340.1| (NC_002488) undecaprenyl pyrophosphate synthetase [Xylella
fastidiosa 9a5c]
pir||B82729 undecaprenyl pyrophosphate synthetase XF1050 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF83860.1|AE003942_4 (AE003942) undecaprenyl pyrophosphate synthetase [Xylella
fastidiosa 9a5c]
Length = 255
Score = 159 bits (401), Expect = 3e-38
Identities = 80/226 (35%), Positives = 132/226 (58%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AIIMDGNGRWA+ +++ R GH+ GVK +C ++ LTL+AFS+ENW RP
Sbjct: 14 RHIAIIMDGNGRWAERRSRPRTTGHRAGVKAAMRTVDFCLEKGIKMLTLFAFSSENWNRP 73
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV+FLM+M K ++ R IG+ + F L + + + E+ T + +
Sbjct: 74 ADEVNFLMEMSIKLFGRGIEELHRRGVQVRFIGERKRFDIALVEHMTKAEHLTANNQRLI 133
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRTGGE 184
LA++YG + +++ A ++L + + E ++ + + + DLP D+ +RT G
Sbjct: 134 LSLAVSYGGRQDITMAARALAQDVAAGRLKPEQIDEDLLGQHMALADLPPPDMFIRTSGV 193
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
+R+SNFLLWQ +Y EL+FT ++WP+F L+ + D+ R R+FG
Sbjct: 194 IRISNFLLWQIAYTELWFTDVMWPEFNSTVLQQALDDYASRERRFG 239
>ref|NP_626749.1| (NC_003888) undecaprenyl phosphate synthetase [Streptomyces
coelicolor A3(2)]
emb|CAB69730.1| (AL137166) undecaprenyl phosphate synthetase [Streptomyces
coelicolor A3(2)]
Length = 277
Score = 158 bits (400), Expect = 4e-38
Identities = 86/231 (37%), Positives = 125/231 (53%), Gaps = 11/231 (4%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+AI+MDGNGRWAK + R GHK G + + D+ + ++LYAFSTENWKR
Sbjct: 35 EHVAIVMDGNGRWAKERGLPRTEGHKVGAEQVMDVLQGAIEMGVGNISLYAFSTENWKRS 94
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV FLM + +++ R T +R R G + K + + + T+ T
Sbjct: 95 PEEVRFLMNFNRDFIRKSRDTLDELGVRVRWAGRMPRLWKSVAKELQVAQEQTKDNDRLT 154
Query: 126 QVLALNYGSKNELSRAFKSLLES------PPSHINLLESLENEISNRLDTHDLPEVDLLL 179
+NYG + E++ A ++L E P+ +N E ++ L D+P+VDL L
Sbjct: 155 LYFCMNYGGRAEIADAAQALAEDVRAGKLDPAKVN-----EKTLAKYLYYPDMPDVDLFL 209
Query: 180 RTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R GE R SN+LLWQS+YAE+ F +LWPDF +DL +F R R+FG
Sbjct: 210 RPSGEQRTSNYLLWQSAYAEMVFQDVLWPDFDRRDLWRACLEFASRDRRFG 260
>ref|NP_216877.1| (NC_000962) hypothetical protein Rv2361c [Mycobacterium
tuberculosis H37Rv]
ref|NP_336910.1| (NC_002755) undecaprenyl diphosphate synthase [Mycobacterium
tuberculosis CDC1551]
sp|O05837|UPPS_MYCTU Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||H70585 hypothetical protein Rv2361c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB08462.1| (Z95208) hypothetical protein Rv2361c [Mycobacterium tuberculosis
H37Rv]
gb|AAK46724.1| (AE007082) undecaprenyl diphosphate synthase [Mycobacterium
tuberculosis CDC1551]
Length = 296
Score = 158 bits (400), Expect = 4e-38
Identities = 86/230 (37%), Positives = 122/230 (52%), Gaps = 1/230 (0%)
Query: 2 DNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTEN 61
D H+AI+MDGNGRWA + AR GHK G + DI ++ L+LYAFSTEN
Sbjct: 65 DRLPNHVAIVMDGNGRWATQRGLARTEGHKMGEAVVIDIACGAIELGIKWLSLYAFSTEN 124
Query: 62 WKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
WKR EV FLM + ++ R T +R R +G + + + + E T+
Sbjct: 125 WKRSPEEVRFLMGFNRDVVRRRRDTLKKLGVRIRWVGSRPRLWRSVINELAVAEEMTKSN 184
Query: 122 KDFTQVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
T +NYG + E++ A + + E +N E+ I+ L D+P+VDL LR
Sbjct: 185 DVITINYCVNYGGRTEITEATREIAREVAAGRLNPERITESTIARHLQRPDIPDVDLFLR 244
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
T GE R SNF+LWQ++YAE F LWPD+ +DL ++ R R+FG
Sbjct: 245 TSGEQRSSNFMLWQAAYAEYIFQDKLWPDYDRRDLWAACEEYASRTRRFG 294
>ref|NP_568883.1| (NM_125266) Expressed protein [Arabidopsis thaliana]
Length = 289
Score = 155 bits (393), Expect = 3e-37
Identities = 81/228 (35%), Positives = 129/228 (56%), Gaps = 3/228 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A+IMDGN RWAK + G++ G K L + C + ++ +AFSTENW R
Sbjct: 59 RHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWGRH 118
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EV LM + ++YLK + + + IR IG+L + L T+ +LE T+ +K
Sbjct: 119 KIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTVHELEEATKSYKKKH 178
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTH--DLPEVDLLLRTG 182
+LA++Y + ++ A K++++ + E ++ + R L T + P DLL+RT
Sbjct: 179 LILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQTRCTEFPSPDLLIRTS 238
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE R+SNF LWQ +Y E FF+P+LWPDF + + + +R R+FG
Sbjct: 239 GEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRRFG 286
>ref|NP_601483.1| (NC_003450) COG0020:Undecaprenyl pyrophosphate synthase
[Corynebacterium glutamicum]
dbj|BAB99676.1| (AP005281) Undecaprenyl pyrophosphate synthase [Corynebacterium
glutamicum ATCC 13032]
Length = 243
Score = 155 bits (393), Expect = 3e-37
Identities = 84/226 (37%), Positives = 123/226 (54%), Gaps = 1/226 (0%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A++MDGNGRWA + R GHK+G L D+ C + L+ YAFSTENW+R
Sbjct: 16 KHIALVMDGNGRWATERGMKRTEGHKRGEAVLLDVVDACIELGVPYLSAYAFSTENWRRS 75
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
EV FLM + L+ +R +R R +G + + + E T+ T
Sbjct: 76 TDEVRFLMGFNRDVLRRQRDDLHEKGVRVRWVGRRPRLWRSVIRELETAEELTKDNTTMT 135
Query: 126 QVLALNYGSKNELSRAFKSLLE-SPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGE 184
+ +NYG + E+ A + + + + + E N LD D+P+VDL LR GE
Sbjct: 136 LAMCVNYGGRAEIIDAARDIARLAAEGKLRPEQITEKTFPNFLDEPDMPDVDLFLRPSGE 195
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R SNFLLWQS+YAE+ + L+PDFT +DL + + ++ KR R+FG
Sbjct: 196 KRTSNFLLWQSAYAEMVYQDKLFPDFTQQDLYDAVLEYAKRDRRFG 241
>ref|NP_565551.1| (NM_127905) expressed protein [Arabidopsis thaliana]
gb|AAF22257.1|AF162441_1 (AF162441) cis-prenyltransferase homolog [Arabidopsis thaliana]
emb|CAB91841.1| (AJ277136) dehydrodolichyl diphosphate synthase [Arabidopsis
thaliana]
gb|AAC23756.2| (AC003040) expressed protein [Arabidopsis thaliana]
Length = 303
Score = 155 bits (392), Expect = 3e-37
Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 4/229 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A I+DGN RWAK + GH+ G K L DI C + ++ +AFSTENW R
Sbjct: 72 RHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFSTENWGRD 131
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNN-IRFRAIGDLEGFSKELRDTILQLENDTRHFKDF 124
K E+D LM +++ Y + + + +R IG+ + L I ++E T+ +K+
Sbjct: 132 KIEIDNLMSLIQHYRNKSNIKFFHRSEVRVSVIGNKTKIPESLLKEIHEIEEATKGYKNK 191
Query: 125 TQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR---LDTHDLPEVDLLLRT 181
++A++Y K ++ A KSL++ + E ++ + R + D P DL++RT
Sbjct: 192 HLIMAVDYSGKFDIMHACKSLVKKSEKGLIREEDVDEALIERELLTNCSDFPSPDLMIRT 251
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE R+SNF LWQ +Y+ELFF+P+ WPDF L ++ + +R R+FG
Sbjct: 252 SGEQRISNFFLWQLAYSELFFSPVFWPDFDKDKLLEALASYQRRERRFG 300
>pir||T01130 hypothetical protein F26B6.6 - Arabidopsis thaliana
Length = 290
Score = 155 bits (392), Expect = 3e-37
Identities = 79/229 (34%), Positives = 128/229 (55%), Gaps = 4/229 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A I+DGN RWAK + GH+ G K L DI C + ++ +AFSTENW R
Sbjct: 59 RHVAFILDGNRRWAKRAGLTTSQGHEAGAKRLIDIAELCFELGVHTVSAFAFSTENWGRD 118
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNN-IRFRAIGDLEGFSKELRDTILQLENDTRHFKDF 124
K E+D LM +++ Y + + + +R IG+ + L I ++E T+ +K+
Sbjct: 119 KIEIDNLMSLIQHYRNKSNIKFFHRSEVRVSVIGNKTKIPESLLKEIHEIEEATKGYKNK 178
Query: 125 TQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR---LDTHDLPEVDLLLRT 181
++A++Y K ++ A KSL++ + E ++ + R + D P DL++RT
Sbjct: 179 HLIMAVDYSGKFDIMHACKSLVKKSEKGLIREEDVDEALIERELLTNCSDFPSPDLMIRT 238
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE R+SNF LWQ +Y+ELFF+P+ WPDF L ++ + +R R+FG
Sbjct: 239 SGEQRISNFFLWQLAYSELFFSPVFWPDFDKDKLLEALASYQRRERRFG 287
>gb|AAM67372.1| (AY084601) undecaprenyl pyrophosphate synthetase-like [Arabidopsis
thaliana]
Length = 289
Score = 155 bits (391), Expect = 4e-37
Identities = 81/228 (35%), Positives = 128/228 (55%), Gaps = 3/228 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A+IMDGN RWAK + G++ G K L + C + ++ +AFSTENW R
Sbjct: 59 RHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWGRH 118
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
K EV LM + ++YLK + + + IR IG+L + L T+ +LE T+ +K
Sbjct: 119 KIEVKCLMYLFQRYLKSKIQFFQSKEIRVSVIGNLAKIPESLLRTVHELEEATKSYKKKH 178
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTH--DLPEVDLLLRTG 182
+LA++Y + ++ A K++++ + E ++ R L T + P DLL+RT
Sbjct: 179 LILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETFFERELQTRCTEFPSPDLLIRTS 238
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE R+SNF LWQ +Y E FF+P+LWPDF + + + +R R+FG
Sbjct: 239 GEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRRFG 286
>dbj|BAA97346.1| (AB020755) undecaprenyl pyrophosphate synthetase-like [Arabidopsis
thaliana]
Length = 225
Score = 154 bits (390), Expect = 6e-37
Identities = 80/222 (36%), Positives = 123/222 (55%), Gaps = 3/222 (1%)
Query: 12 MDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDF 71
MDGN RWAK + GH+ G K L + + C + ++ +AFSTENW R K EV
Sbjct: 1 MDGNRRWAKRAGLLTSQGHEAGAKRLIEFSELCFKLGIHTVSAFAFSTENWGRHKIEVKC 60
Query: 72 LMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQVLALN 131
LM +++ YLK + + R IG+L + L T+ ++E TR +K +LA++
Sbjct: 61 LMSLIQHYLKSKIQYFQREETRVSVIGNLTKIPESLLRTVQEIEEATRSYKKKHLILAID 120
Query: 132 YGSKNELSRAFKSLLESPPSHINLLESLENEISNR---LDTHDLPEVDLLLRTGGEMRLS 188
Y + ++ RA KS+++ + E ++ + R + + P DLL+RT GE R+S
Sbjct: 121 YSGRLDILRACKSIVKKSEKGLIREEDVDEALIERELLTNCTEFPSPDLLIRTSGEQRIS 180
Query: 189 NFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
NF LWQ +Y ELFF+P+LWPDF L + + +R R+FG
Sbjct: 181 NFFLWQLAYTELFFSPVLWPDFDKDKLLEALVSYQRRERRFG 222
>ref|NP_568884.1| (NM_125267) dehydrodolichyl diphosphate synthase - like protein
[Arabidopsis thaliana]
Length = 244
Score = 150 bits (380), Expect = 8e-36
Identities = 78/228 (34%), Positives = 129/228 (56%), Gaps = 3/228 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A+I+DGN RWA+ + + GH+ G + L + C ++L+AFSTENW+RP
Sbjct: 14 KHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTENWERP 73
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EV LM + +KYL + ++ I+ IG+ + L I ++E T+ ++
Sbjct: 74 EDEVKCLMALFEKYLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKSYEGKN 133
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDT--HDLPEVDLLLRTG 182
++A++Y + ++ +A KSL + +E + E + L T + P DLL+RT
Sbjct: 134 LIIAIDYSGRYDILQACKSLANKVKDGLIQVEDINEKAMEKELLTKCSEFPNPDLLIRTS 193
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE R+SNF LWQS+Y EL+F +LWPDF + ++ + +R R+FG
Sbjct: 194 GEQRISNFFLWQSAYTELYFPTVLWPDFGEAEYLEALTWYQQRQRRFG 241
>dbj|BAA97348.1| (AB020755) cis-prenyltransferase homolog-like; undecaprenyl
phosphate synthetase-like [Arabidopsis thaliana]
Length = 302
Score = 150 bits (380), Expect = 8e-36
Identities = 78/228 (34%), Positives = 129/228 (56%), Gaps = 3/228 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A+I+DGN RWA+ + + GH+ G + L + C ++L+AFSTENW+RP
Sbjct: 72 KHVAVILDGNRRWAEKRGLGTSEGHEAGARRLMENAKDCFAMGTNTISLFAFSTENWERP 131
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
+ EV LM + +KYL + ++ I+ IG+ + L I ++E T+ ++
Sbjct: 132 EDEVKCLMALFEKYLASDMPYLRSDKIKISVIGNRTKLPESLLGLIEEVEEATKSYEGKN 191
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDT--HDLPEVDLLLRTG 182
++A++Y + ++ +A KSL + +E + E + L T + P DLL+RT
Sbjct: 192 LIIAIDYSGRYDILQACKSLANKVKDGLIQVEDINEKAMEKELLTKCSEFPNPDLLIRTS 251
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE R+SNF LWQS+Y EL+F +LWPDF + ++ + +R R+FG
Sbjct: 252 GEQRISNFFLWQSAYTELYFPTVLWPDFGEAEYLEALTWYQQRQRRFG 299
>gb|AAL11543.1| (AF416720) undecaprenyl diphosphate synthase [Mycobacterium
parafortuitum]
Length = 296
Score = 150 bits (378), Expect = 1e-35
Identities = 85/230 (36%), Positives = 119/230 (50%), Gaps = 1/230 (0%)
Query: 2 DNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTEN 61
D +H+A++MDGNGRWA + R GHK G L DIT ++ LT+YAFSTEN
Sbjct: 65 DQVPQHVAVVMDGNGRWATQRGLGRTEGHKMGEAVLIDITCGAIEIGIKHLTVYAFSTEN 124
Query: 62 WKRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
WKR EV FLM ++ ++ R + +R R +G + E T
Sbjct: 125 WKRSTEEVRFLMGFNREVVRRRRENLNDMGVRMRWVGSRPRMWSSVIKEFDIAEQMTVDN 184
Query: 122 KDFTQVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
T +NYG + E+ A + L E+ I E + + L D+P+VDL +R
Sbjct: 185 DVITINYCVNYGGRTEIVEAARELAQEAVDGKIKPNRISEAQFAKHLHRSDIPDVDLFIR 244
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
T GE R SNFLLWQ++YAE F LWPD+ +DL ++ +R R+FG
Sbjct: 245 TSGEQRASNFLLWQAAYAEYVFQDKLWPDYDRRDLWAACEEYVQRNRRFG 294
>pir||T51169 hypothetical protein [imported] - Thermus aquaticus
dbj|BAA33784.1| (AB018379) unknown ORF [Thermus thermophilus]
Length = 263
Score = 150 bits (378), Expect = 1e-35
Identities = 85/234 (36%), Positives = 132/234 (56%), Gaps = 11/234 (4%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+HL +I+DGN R+A+ + GH+ GV+ ++ WC ++ +T++ FST+N+KRP
Sbjct: 31 RHLGLILDGNRRYARALGLSPTKGHEFGVQKAYEVLEWCLEMGIKTVTVWVFSTDNFKRP 90
Query: 66 KSEVDFLMKML----KKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
EV+ LM + ++ +D R L + +R R IG EGFS E+ I +LE T
Sbjct: 91 PEEVETLMNLFLREAERMAEDHR--ILEHQVRVRFIGRREGFSPEVVRAIERLERRTEGH 148
Query: 122 KDFTQVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLEN----EISNRLDTHDLPEVD 176
+ +AL YG + E+ A K LL E+ ++ E E +I+ L T LP+ D
Sbjct: 149 RGMFLNIALGYGGREEIVDAVKRLLLEAEARGLSPKEVAEGLTPEDIARHLYTAGLPDPD 208
Query: 177 LLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
++RT GE+RLS FLLWQS+Y+E +F +LWP+F D + + R R+FG
Sbjct: 209 FIIRTSGEIRLSGFLLWQSAYSEFYFADVLWPEFRKIDFLRALRSYQARERRFG 262
>ref|NP_301525.1| (NC_002677) putative undecaprenyl pyrophosphate synthetase
[Mycobacterium leprae]
sp|P38119|UPPS_MYCLE Undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||S72601 hypothetical protein B1937_F2_65 - Mycobacterium leprae
gb|AAA17169.1| (U00016) B1937_F2_65 [Mycobacterium leprae]
emb|CAC30142.1| (AL583919) putative undecaprenyl pyrophosphate synthetase
[Mycobacterium leprae]
Length = 296
Score = 147 bits (371), Expect = 9e-35
Identities = 79/225 (35%), Positives = 118/225 (52%), Gaps = 1/225 (0%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+AI+MDGNGRWA + R GHK G + D+ ++ L+LYAFSTENWKR
Sbjct: 70 HVAIVMDGNGRWANQRGLHRTEGHKMGEAVVIDVACGAIELGIKWLSLYAFSTENWKRSV 129
Query: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
EV FLM + ++ R +R R +G + + + + E+ T T
Sbjct: 130 EEVRFLMGFNRDVVRRRRENLKEMGVRIRWVGSRPRLWRSVINELAIAEHMTAGNDVITI 189
Query: 127 VLALNYGSKNELSRAFKSLLE-SPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEM 185
+NYG + E++ A + + + +N E+ I+ L D+P+VDL +RT GE
Sbjct: 190 NYCVNYGGRTEIAEATREIARLAAAGRLNPERITESTITRHLQRPDIPDVDLFVRTSGEQ 249
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R SNF+LWQ++Y E F LWPD+ +DL ++ R R+FG
Sbjct: 250 RSSNFMLWQAAYTEYIFQDKLWPDYDRRDLWAACEEYASRNRRFG 294
>ref|NP_614051.1| (NC_003551) Undecaprenyl pyrophosphate synthase [Methanopyrus
kandleri AV19]
gb|AAM01981.1| (AE010368) Undecaprenyl pyrophosphate synthase [Methanopyrus
kandleri AV19]
Length = 271
Score = 142 bits (357), Expect = 4e-33
Identities = 80/228 (35%), Positives = 123/228 (53%), Gaps = 3/228 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+ IIMDGN R+A+ GH+ G L+D+ WC + ++ +T+YA STEN RP
Sbjct: 43 EHVGIIMDGNRRFARELGLEPWEGHRYGADKLEDVLEWCLDLGVKAVTVYALSTENLNRP 102
Query: 66 KSEVDFLMKMLKKYLKD--ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
K E+ L ++++ K E + RA+G L +R I + E T+ +KD
Sbjct: 103 KEELKRLFDLMEERFKALAESERIHRRKVAVRAVGRLHLLPTRVRRAIKKAERATKEYKD 162
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPP-SHINLLESLENEISNRLDTHDLPEVDLLLRTG 182
+A+ YG + E+ A + + ++ E E + DLP+ +L++RT
Sbjct: 163 RFLNVAVAYGGRQEIIDAVREIAHDVKVGRLDPDEIDEGTFRKYVYVGDLPDPELIIRTS 222
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE RLSNFLLW S+Y+EL+F + WP+F DL I +F KR R+FG
Sbjct: 223 GEERLSNFLLWYSAYSELYFVDVYWPEFRKIDLLRAIREFQKRERRFG 270
>ref|NP_560372.1| (NC_003364) conserved hypothetical protein [Pyrobaculum aerophilum]
gb|AAL64554.1| (AE009902) conserved hypothetical protein [Pyrobaculum aerophilum]
Length = 238
Score = 138 bits (347), Expect = 6e-32
Identities = 81/229 (35%), Positives = 133/229 (57%), Gaps = 8/229 (3%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHK-LECLTLYAFSTENWKRP 65
H+A+I DGN R+AK + +KKGV+ +++ W + ++ +T +A STEN +R
Sbjct: 12 HIAVIPDGNRRYAKKTGIDFYHAYKKGVEKVRNFLTWALEFRDIKNVTFFALSTENLQRS 71
Query: 66 KSEVDFLMKMLKKYLKDERSTYL--NNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
K E++ L ++ + L+ L +N +R R IGD ++ I +LE+ T+++ +
Sbjct: 72 KIELEILFRIFEDELRRTLEDPLIHDNKVRVRFIGDRSLLPGKVVKYIDELESVTKNYSN 131
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLP--EVDLLLRT 181
+ +AL YG + E+ R K +L + L E E+ LDT +P E D+++RT
Sbjct: 132 YHLTIALGYGGRAEIVRCIKRVLSG---EVRLETFSEEELFQCLDTRGIPNPEPDVVVRT 188
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GGE RLSNFLL+Q++Y+EL F LWP+ +DL II ++ +R R+FG
Sbjct: 189 GGEKRLSNFLLYQTAYSELIFLEKLWPEVEREDLVYIIEEYSRRQRRFG 237
>ref|NP_079163.1| (NM_024887) hypothetical protein FLJ13102 [Homo sapiens]
dbj|BAB14439.1| (AK023164) unnamed protein product [Homo sapiens]
Length = 334
Score = 137 bits (344), Expect = 1e-31
Identities = 82/226 (36%), Positives = 125/226 (55%), Gaps = 14/226 (6%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A IMDGN R+AK R GH +G L + WC N + +T+YAFS EN+KR
Sbjct: 27 KHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRS 86
Query: 66 KSEVDFLMKMLKK---YLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
KSEVD LM + ++ L +E+ + + R +GDL +L++ I Q T+++
Sbjct: 87 KSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYN 146
Query: 123 DFTQVLALNYGSKNELSRAFKSLLES------PPSHINLLESLENEISNRLDTHDLPEVD 176
+ Y S++E+S A + + PS I+ E+ + L T+ P D
Sbjct: 147 KCFLYVCFAYTSRHEISNAVREMAWGVEQGLLDPSDIS-----ESLLDKCLYTNRSPHPD 201
Query: 177 LLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDF 222
+L+RT GE+RLS+FLLWQ+S++ L F P+LWP++T +L I F
Sbjct: 202 ILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQF 247
>ref|XP_084054.4| (XM_084054) hypothetical protein FLJ13102 [Homo sapiens]
Length = 334
Score = 136 bits (342), Expect = 2e-31
Identities = 82/226 (36%), Positives = 125/226 (55%), Gaps = 14/226 (6%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A IMDGN R+AK R GH +G L + WC N + +T+YAFS EN+KR
Sbjct: 27 KHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRS 86
Query: 66 KSEVDFLMKMLKK---YLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
KSEVD LM + ++ L +E+ + + R +GDL +L++ I Q T+++
Sbjct: 87 KSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYN 146
Query: 123 DFTQVLALNYGSKNELSRAFKSLLES------PPSHINLLESLENEISNRLDTHDLPEVD 176
+ Y S++E+S A + + PS I+ E+ + L T+ P D
Sbjct: 147 KCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDIS-----ESLLDKCLYTNRSPHPD 201
Query: 177 LLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDF 222
+L+RT GE+RLS+FLLWQ+S++ L F P+LWP++T +L I F
Sbjct: 202 ILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQF 247
>dbj|BAA97347.1| (AB020755) undecaprenyl pyrophosphate synthetase-like [Arabidopsis
thaliana]
Length = 226
Score = 136 bits (342), Expect = 2e-31
Identities = 78/230 (33%), Positives = 123/230 (52%), Gaps = 14/230 (6%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A+IMDGN RWAK + G++ G K L + C + ++ +AFSTENW R
Sbjct: 3 RHVAVIMDGNRRWAKQTGLLTSQGYEAGAKRLLEFADLCFKLGINTVSAFAFSTENWGRH 62
Query: 66 KSE--VDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
KS F+ L + K+ IR IG+L + L T+ +LE T+ +K
Sbjct: 63 KSFSIAQFVTNNLVCFSKE---------IRVSVIGNLAKIPESLLRTVHELEEATKSYKK 113
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTH--DLPEVDLLLR 180
+LA++Y + ++ A K++++ + E ++ + R L T + P DLL+R
Sbjct: 114 KHLILAIDYSGRFDILGACKNIVKKSEQGLIREEDVDETLFERELQTRCTEFPSPDLLIR 173
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
T GE R+SNF LWQ +Y E FF+P+LWPDF + + + +R R+FG
Sbjct: 174 TSGEQRISNFFLWQLAYTEFFFSPVLWPDFDKQKFIEALVSYQRRDRRFG 223
>gb|AAH03643.1|AAH03643 (BC003643) Similar to RIKEN cDNA 3222401G21 gene [Homo sapiens]
Length = 333
Score = 136 bits (342), Expect = 2e-31
Identities = 82/226 (36%), Positives = 125/226 (55%), Gaps = 14/226 (6%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A IMDGN R+AK R GH +G L + WC N + +T+YAFS EN+KR
Sbjct: 27 KHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRS 86
Query: 66 KSEVDFLMKMLKK---YLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
KSEVD LM + ++ L +E+ + + R +GDL +L++ I Q T+++
Sbjct: 87 KSEVDGLMDLARQKFSRLMEEKEKLQKHGVCIRVLGDLHLLPLDLQELIAQAVQATKNYN 146
Query: 123 DFTQVLALNYGSKNELSRAFKSLLES------PPSHINLLESLENEISNRLDTHDLPEVD 176
+ Y S++E+S A + + PS I+ E+ + L T+ P D
Sbjct: 147 KCFLNVCFAYTSRHEISNAVREMAWGVEQGLLDPSDIS-----ESLLDKCLYTNRSPHPD 201
Query: 177 LLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDF 222
+L+RT GE+RLS+FLLWQ+S++ L F P+LWP++T +L I F
Sbjct: 202 ILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQF 247
>dbj|BAB12723.1| (AB048249) cis-polyprenyl diphosphate synthase [Sulfolobus
acidocaldarius]
Length = 262
Score = 135 bits (339), Expect = 5e-31
Identities = 78/228 (34%), Positives = 124/228 (54%), Gaps = 4/228 (1%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW-KRP 65
H+ II DGN RWA+ G+ G L+D+ W + +T++A S EN KR
Sbjct: 34 HVGIIPDGNRRWARNNRLPLDQGYYTGYVKLRDVLTWILEIGISTVTVFALSAENCEKRT 93
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNN--IRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
+ E+ + K LK L + ++ L + +R +AIG L+ ++L+ ++ LE+ T +
Sbjct: 94 QQELSMIFKYLKIGLDELLTSDLVHKYQVRVKAIGMLDKLPEDLKKLVVDLESTTEKYNK 153
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRLDTHDLPEVDLLLRTG 182
+LA+ YG + E+ A + ++ I +S+ E+ L +L ++DLL+R+
Sbjct: 154 KKLILAICYGGRQEILDAIRKIMNDYKLGIIDSKSIDESTFRKYLYDQELSDIDLLIRSS 213
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE+R+SNFLLW +Y+ELFF + WPDF DL I F KR R FG
Sbjct: 214 GEIRISNFLLWHLAYSELFFVDVYWPDFRKIDLWRAIRSFQKRKRNFG 261
>ref|NP_280522.1| (NC_002607) Vng1779c [Halobacterium sp. NRC-1]
gb|AAG20002.1| (AE005081) Vng1779c [Halobacterium sp. NRC-1]
Length = 302
Score = 133 bits (334), Expect = 2e-30
Identities = 78/238 (32%), Positives = 129/238 (53%), Gaps = 5/238 (2%)
Query: 1 MDNTLKHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTE 60
+D H+A+I DGN R+A+ G++ G +T + + WC++ +E LTLYAFSTE
Sbjct: 21 IDGAPAHVAVIQDGNRRYAREHGDDPTDGYQSGARTTERVLEWCSDLGVEELTLYAFSTE 80
Query: 61 NWKRPKSEVDFLMKMLKKYLKD--ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDT 118
N++RP + L +L+ L++ + + +R RAIGD + +RD I E+ T
Sbjct: 81 NFERPPDQQQHLFDLLESKLREFADADRVHADRVRIRAIGDTGRLPQRVRDAITYAESRT 140
Query: 119 RHFKDFTQVLALNYGSKNELSRAFKSLLES-PPSHINLLESLENEISNRLDTHDLPEVDL 177
+ FT +AL YG ++EL A + + ++ ++ + I +RL T + +VDL
Sbjct: 141 AGYDGFTLNVALAYGGRDELLTAARGVADAVAAGDLDPADIDAQAIESRLHTSPVRDVDL 200
Query: 178 LLRTGGEMRLSNFLLWQS--SYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGELK 233
++RTGG+ R SNFL W + S A +FF WP+F+ DL I + R + + +
Sbjct: 201 IIRTGGDERTSNFLPWHANGSEAAVFFCTPYWPEFSKVDLLRAIRTYESRAASWRQTR 258
>gb|EAA01246.1| (AAAB01008987) agCP12883 [Anopheles gambiae str. PEST]
Length = 334
Score = 130 bits (327), Expect = 1e-29
Identities = 81/226 (35%), Positives = 126/226 (54%), Gaps = 5/226 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A IMDGN R+A+ N A+A GH G + L + WC + +T+YAFS EN+KR
Sbjct: 56 RHVAFIMDGNRRYARKANIAKAEGHSAGFEKLSETLQWCLEVGITEVTVYAFSIENFKRT 115
Query: 66 KSEVDFLMKMLK---KYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
+ EVD LM + + + L ER I R IG+ + ++R +I + TRH +
Sbjct: 116 QEEVDTLMNLARDKFQRLLAERDKLHERGICIRIIGNWDLLEPDIRRSIAEAVLLTRHNR 175
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNR-LDTHDLPEVDLLLRT 181
+A Y S++E++ + +++ ++ + + E+ R L T E DLL+RT
Sbjct: 176 KAILNVAFAYTSRDEITHSIRTVAQAVGDGQLEPDDVSEELLTRCLYTKYSAEPDLLVRT 235
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVR 227
GE+RLS+FLLWQS+ ++FT LWP+FT L + Y+RVR
Sbjct: 236 SGEVRLSDFLLWQSATTVMYFTETLWPEFTIWHLLGAVFS-YQRVR 280
>gb|AAH04011.1|AAH04011 (BC004011) RIKEN cDNA 3222401G21 gene [Mus musculus]
Length = 333
Score = 129 bits (325), Expect = 2e-29
Identities = 80/230 (34%), Positives = 127/230 (54%), Gaps = 18/230 (7%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A IMDGN R+AK R GH +G L + WC N + +T+YAFS EN+KR
Sbjct: 27 KHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRS 86
Query: 66 KSEVDFLMKMLKK---YLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
KSEVD L+ + ++ L +E+ + + R +GDL +L++ I T+++
Sbjct: 87 KSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAIQATKNYN 146
Query: 123 DFTQVLALNYGSKNELSRAFK--------SLLESPPSHINLLESLENEISNRLDTHDLPE 174
+ Y S++E++ A + LLE PS ++ E+ + L ++ P
Sbjct: 147 KCFLNVCFAYTSRHEIANAVREMAWGVEQGLLE--PSDVS-----ESLLDKCLYSNHSPH 199
Query: 175 VDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYK 224
D+L+RT GE+RLS+FLLWQ+S++ L F P+LWP++T +L I F +
Sbjct: 200 PDILIRTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLCEAILQFQR 249
>ref|NP_632642.1| (NC_003901) Undecaprenyl pyrophosphate synthetase [Methanosarcina
mazei Goe1]
gb|AAM30314.1| (AE013286) Undecaprenyl pyrophosphate synthetase [Methanosarcina
mazei Goe1]
Length = 324
Score = 129 bits (325), Expect = 2e-29
Identities = 78/219 (35%), Positives = 127/219 (57%), Gaps = 10/219 (4%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A+IMDGN R+A KAR +GH G + + + WC ++ LTLYAFSTEN++R
Sbjct: 54 EHIAVIMDGNRRYAGQLGKARIFGHAMGAEVTEQVIEWCYEIGVKQLTLYAFSTENFQRS 113
Query: 66 KSEVDFLMKML-KKYLK--DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
+ EV L ++ +K+LK ++ TY ++ R IGD L ++I ++E T H +
Sbjct: 114 EEEVGGLFNLINEKFLKLHTDKRTY-EKEMQVRVIGDRTKLPAYLNESIDRIEKATEHHR 172
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPS-HINLLESLENEISNRL---DTHDLPEVDLL 178
F+ +A+ YG + ++ +A + + S ++L + E+ IS L +P VDL+
Sbjct: 173 KFSLNVAIAYGGRQDIMQAVRDIATCVSSGKLSLEDVNESLISKHLYPAPGVPVPNVDLI 232
Query: 179 LRTGGEMRLSNFLLWQSSYAE--LFFTPILWPDFTPKDL 215
+RTGG+ R+SNFL WQ++ +E +F WP+F DL
Sbjct: 233 IRTGGDERISNFLPWQANGSECATYFCAPFWPEFRKIDL 271
>ref|NP_376036.1| (NC_003106) 262aa long hypothetical undecaprenyl pyrophosphate
synthetase [Sulfolobus tokodaii]
dbj|BAB65145.1| (AP000981) 262aa long hypothetical undecaprenyl pyrophosphate
synthetase [Sulfolobus tokodaii]
Length = 262
Score = 129 bits (323), Expect = 3e-29
Identities = 76/229 (33%), Positives = 120/229 (52%), Gaps = 4/229 (1%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW-KR 64
+H+ II DGN RWA+ N + + G + LK + +W ++ +T++A STEN KR
Sbjct: 33 QHVGIIPDGNRRWARANNLSINDAYYSGYRKLKQVLLWLLEMGIKNITVFALSTENCDKR 92
Query: 65 PKSEVDFLMKMLKKYLKD--ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
E++ + +K L++ ++ RAIG + +L + + QL T +F
Sbjct: 93 SNLELNTIFNYIKAGLEELLYGEIIYKYEVKVRAIGLIYKLPLDLLEVLNQLSKKTENFN 152
Query: 123 DFTQVLALNYGSKNELSRAFKSLL-ESPPSHINLLESLENEISNRLDTHDLPEVDLLLRT 181
LA+ YG + E+ A K ++ + I L + EN L +L ++DL++R+
Sbjct: 153 KRKLTLAICYGGRQEIIDATKKIIADYEKGKIKLDDINENIFRQYLYDKELEDIDLVIRS 212
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE+R+SNFLLW +Y+ELFF WPDF DL I + KR R FG
Sbjct: 213 SGEIRISNFLLWHIAYSELFFVDTYWPDFRKIDLWRAIRSYQKRKRNFG 261
>ref|NP_618595.1| (NC_003552) di-trans-poly-cis-decaprenylcistransferase
[Methanosarcina acetivorans str. C2A] [Methanosarcina
acetivorans C2A]
gb|AAM07075.1| (AE011084) di-trans-poly-cis-decaprenylcistransferase
[Methanosarcina acetivorans str. C2A] [Methanosarcina
acetivorans C2A]
Length = 298
Score = 128 bits (321), Expect = 6e-29
Identities = 80/228 (35%), Positives = 127/228 (55%), Gaps = 10/228 (4%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A+IMDGN R+A + + R++GH G + + + WC ++ LTLYAFSTEN++R +
Sbjct: 29 HIAVIMDGNRRYAGQRGRTRSFGHAMGAEVTEQVIEWCYEIGVKELTLYAFSTENFQRSE 88
Query: 67 SEVDFLMKML-KKYLK--DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
EVD L ++ +K+LK +++ TY + R IGD L +I ++E T +
Sbjct: 89 EEVDGLFNLINEKFLKLYNDKRTY-EKETQIRVIGDRTKLPAFLNKSIEKIEKATETHRK 147
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESL-ENEISNRL---DTHDLPEVDLLL 179
F +A+ YG + ++ +A + + S LE + EN IS L +P VDL++
Sbjct: 148 FNLNVAIAYGGRQDIMQAVRDIAACVSSGKLSLEDVDENLISKHLYPAPGVSVPNVDLIV 207
Query: 180 RTGGEMRLSNFLLWQSSYAE--LFFTPILWPDFTPKDLENIISDFYKR 225
RTGG+ R+SNFL WQ++ +E +F WP+F DL I + R
Sbjct: 208 RTGGDERVSNFLPWQANGSECATYFCAPFWPEFRKIDLLRSIRVYQAR 255
>ref|NP_296167.1| (NC_001263) undecaprenyl diphosphate synthase [Deinococcus
radiodurans]
pir||C75273 undecaprenyl diphosphate synthase - Deinococcus radiodurans
(strain R1)
gb|AAF11988.1|AE002074_6 (AE002074) undecaprenyl diphosphate synthase [Deinococcus
radiodurans]
Length = 339
Score = 127 bits (320), Expect = 8e-29
Identities = 73/235 (31%), Positives = 120/235 (51%), Gaps = 11/235 (4%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+HL +I+DGN R+A+ R GH G ++ WC + T++ ST+N R
Sbjct: 107 RHLGLILDGNRRFARAAGLQREMGHSFGADKAHEVLQWCLELGIPSATIWVLSTDNGSRE 166
Query: 66 KSEVDFLMKMLKKYLK----DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
+E+ ++ +L++ + D R N +R RAIG + F ++ + LE T +
Sbjct: 167 PAELAHILSLLEREARQLAVDPRIHA--NRVRVRAIGQHDNFPPQVLAALNNLEESTAGY 224
Query: 122 KDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLE-SLENEISNRLDTH----DLPEVD 176
+ +A+ YG + E+ A +S L + + LE + EN + + H D P+ D
Sbjct: 225 EGMRLNIAVGYGGREEIVDAVQSYLRTQAAQGATLEQAAENLTPDAIGAHLYAADQPDPD 284
Query: 177 LLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
++RT GE+RLS F+LWQS Y+E +F + WP F D + DF R R+FG+
Sbjct: 285 FIIRTSGEIRLSGFMLWQSVYSEYYFCDVYWPGFRRVDFLRALRDFQGRDRRFGK 339
>ref|NP_341718.1| (NC_002754) Undecaprenyl diphosphate synthase [Sulfolobus
solfataricus]
gb|AAK40508.1| (AE006654) Undecaprenyl diphosphate synthase [Sulfolobus
solfataricus]
Length = 262
Score = 127 bits (319), Expect = 1e-28
Identities = 79/229 (34%), Positives = 126/229 (54%), Gaps = 6/229 (2%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW-KRP 65
H+ II DGN RWA+ N + + G K LK++ IW ++ +T++ STEN KR
Sbjct: 34 HVGIIPDGNRRWARDNNLSLNDAYFYGYKKLKEVLIWLLELGIKNITVFVLSTENCDKRK 93
Query: 66 KSEVDFLMKMLKKYLKD--ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
++E+ + +K+ ++D E ++ AIG L+ K+L D + ++ T ++
Sbjct: 94 QNELSIITTYIKRGIQDLLEDPIVDKYEVKVSAIGKLDKLPKDLIDYLNRVVEKTSNYDK 153
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHD--LPEVDLLLRT 181
LA+ YG + E+ A LL+ + +++S NE + R +D L ++DL++RT
Sbjct: 154 RKLTLAICYGGRQEILDAVVRLLDDYRNG-KIVKSEINEETFRKYFYDSELQDIDLVIRT 212
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE+R+SNFLLW +Y+ELFF WP+F DL I F KR R FG
Sbjct: 213 SGEVRISNFLLWHVAYSELFFCEAYWPEFRKIDLWRAIRSFQKRKRNFG 261
>ref|NP_070047.1| (NC_000917) conserved hypothetical protein [Archaeoglobus fulgidus]
sp|O29049|UPPS_ARCFU Probable undecaprenyl pyrophosphate synthetase (UPP synthetase)
(Di-trans-poly-cis-decaprenylcistransferase)
(Undecaprenyl diphosphate synthase) (UDS)
pir||B69402 conserved hypothetical protein AF1219 - Archaeoglobus fulgidus
gb|AAB90027.1| (AE001020) conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 251
Score = 125 bits (313), Expect = 5e-28
Identities = 75/218 (34%), Positives = 121/218 (55%), Gaps = 14/218 (6%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+AIIMDGN R+A+ K GH G K +++ WC + ++ LTLYAFSTEN++R +
Sbjct: 23 HIAIIMDGNRRFARKKGLEPHEGHFFGSKKAEEVLEWCWDLGVKMLTLYAFSTENFRRSE 82
Query: 67 SEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
E + ++L+ L+ +R TY +R + +G E + LR+TI ++E T+ +
Sbjct: 83 KEKKNIFQLLESELRRLLKDRRTY-ERELRVKVVGKRELLPENLRETIKEVEERTKKHRR 141
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDL------PEVDL 177
+A+ YG + E+ A +++L + E EI ++ L +VDL
Sbjct: 142 HYLNVAVAYGGRQEIIDAVRAILRK----VRKGEVRPEEIDEKMLEEHLYGEGRYSKVDL 197
Query: 178 LLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDL 215
++RTGGE RLSNFL WQ++ + +F + WP+F DL
Sbjct: 198 IIRTGGEQRLSNFLPWQAANSVAYFCDVYWPEFRKIDL 235
>ref|NP_639818.1| (NC_003903) putative bifunctional undecaprenyl pyrophosphate
synthetase/phytoene synthase [Streptomyces coelicolor
A3(2)]
emb|CAC36733.1| (AL590464) putative bifunctional undecaprenyl pyrophosphate
synthetase/phytoene synthase [Streptomyces coelicolor]
Length = 564
Score = 121 bits (304), Expect = 5e-27
Identities = 73/225 (32%), Positives = 113/225 (49%), Gaps = 2/225 (0%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A+I DGN RWA+ + GH+ G++ + + + +T+Y FSTENW R +
Sbjct: 323 HIAVIADGNRRWAEARGLLADQGHRAGIRAVLRLVNAAQRTGIRHVTVYMFSTENWYRSQ 382
Query: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
EV L + T +R R G + + L + LE+ T + T
Sbjct: 383 GEVAALFGAFADWFARGAQTVHELGVRVRWSGRRDRLEESLASSFELLESMTANNDKLTL 442
Query: 127 VLALNYGSKNELSRAFKSL-LESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEM 185
+ L+YG + EL+ A ++L E+ I + E++ L ++P+VDLL+RT E
Sbjct: 443 TICLDYGGREELAAAARALAAEAVAGTIRPEQIGMAEVARHLYVPEMPDVDLLVRT-CEQ 501
Query: 186 RLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
R+SNFL W +YAEL F P WPDF L + + + R R+FG
Sbjct: 502 RISNFLPWHLAYAELVFDPAPWPDFDLARLRDAVDSYAGRERRFG 546
>ref|NP_215602.1| (NC_000962) hypothetical protein Rv1086 [Mycobacterium tuberculosis
H37Rv]
ref|NP_335560.1| (NC_002755) undecaprenyl diphosphate synthase [Mycobacterium
tuberculosis CDC1551]
sp|O53434|YA86_MYCTU Hypothetical protein Rv1086
pir||D70895 hypothetical protein Rv1086 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAA17202.1| (AL021897) hypothetical protein Rv1086 [Mycobacterium tuberculosis
H37Rv]
gb|AAK45374.1| (AE006992) undecaprenyl diphosphate synthase [Mycobacterium
tuberculosis CDC1551]
Length = 262
Score = 119 bits (298), Expect = 3e-26
Identities = 72/231 (31%), Positives = 118/231 (50%), Gaps = 8/231 (3%)
Query: 6 KHLAIIMDGNGRWAKLKNKAR-AYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKR 64
+H+A++ DGN RWA+ +YG++ G + ++ WC +E T+Y STEN +R
Sbjct: 33 RHIAVLCDGNRRWARSAGYDDVSYGYRMGAAKIAEMLRWCHEAGIELATVYLLSTENLQR 92
Query: 65 PKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDF 124
E+ L++++ +++ + N+ R +GDL +E + T F
Sbjct: 93 DPDELAALIEIITDVVEEICAPA--NHWSVRTVGDLGLIGEEPARRLRGAVESTPEVASF 150
Query: 125 TQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-----ISNRLDTHDLPEVDLLL 179
+A+ YG + E+ A ++LL ++ E L + IS L T P+ DL++
Sbjct: 151 HVNVAVGYGGRREIVDAVRALLSKELANGATAEELVDAVTVEGISENLYTSGQPDPDLVI 210
Query: 180 RTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
RT GE RLS FLLWQS+Y+E++FT WP F D + D+ R R +G
Sbjct: 211 RTSGEQRLSGFLLWQSAYSEMWFTEAHWPAFRHVDFLRALRDYSARHRSYG 261
>sp|P20182|YT14_STRFR Hypothetical 29.1 kDa protein in transposon TN4556
Length = 259
Score = 119 bits (297), Expect = 4e-26
Identities = 75/234 (32%), Positives = 124/234 (52%), Gaps = 10/234 (4%)
Query: 6 KHLAIIMDGNGRWAKLKNKAR-AYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW-K 63
KH+ +IMDGN RWA+ A + GH+ G + ++ + WC ++ +T++ STEN +
Sbjct: 26 KHIGLIMDGNRRWARQMGMANPSIGHRYGAEHVESVLSWCETAGIKHVTVFVCSTENLQR 85
Query: 64 RPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEG-FSKELRDTILQLENDTRHFK 122
R +EV FLM+++++ + + + + R G L+ + + + TR
Sbjct: 86 RGDTEVSFLMQVIEQVVAVHLARP-DARWQVRIAGTLDXPCADSTAHALKEAVEATRRCT 144
Query: 123 DFTQV-LALNYGSKNELSRAFKSLLESPPSHINLLESLE-----NEISNRLDTHDLPEVD 176
+QV LA+ YG + E+ A + LL + LE L ++I+ L T P+ D
Sbjct: 145 TGSQVTLAIGYGGRQEVIDAVRELLHEQAAAGTTLEDLAASLTMDDITRHLYTAGQPDPD 204
Query: 177 LLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
L++RT GE R+SNFLLWQS+Y+EL+F WP F D + + R R++G
Sbjct: 205 LVIRTSGEQRMSNFLLWQSAYSELYFCEAYWPAFREIDFLRALRSYAARQRRYG 258
>ref|NP_302598.1| (NC_002677) possible undecaprenyl pyrophosphate synthetase
[Mycobacterium leprae]
emb|CAC31984.1| (AL583925) possible undecaprenyl pyrophosphate synthetase
[Mycobacterium leprae]
Length = 262
Score = 119 bits (297), Expect = 4e-26
Identities = 73/232 (31%), Positives = 123/232 (52%), Gaps = 8/232 (3%)
Query: 6 KHLAIIMDGNGRWAKLKNKAR-AYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKR 64
+H+A++ DGN RWA+ +YG++ G + ++ WC +E T+Y STEN +R
Sbjct: 33 RHIAVLCDGNRRWARDAGYDDVSYGYRMGAAKIAEMLRWCQEAGIEMTTVYLLSTENLQR 92
Query: 65 PKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDF 124
E+ L++++ +++ + N R +GDLE +E + T F
Sbjct: 93 DPDELAALIEIITDVVEEICAPA--NRWSVRTVGDLELLGEEPACRLRGAVESTPGVAPF 150
Query: 125 TQVLALNYGSKNELSRAFKSLLESPPSH----INLLESLENE-ISNRLDTHDLPEVDLLL 179
+A+ YG + E+ A ++LL ++ L+E++ E I+ L T P+ DL++
Sbjct: 151 HVNVAVGYGGRREIVGAVRALLGKELANGATAEELVEAVTVEGIARNLYTSGQPDPDLVI 210
Query: 180 RTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
RT GE RLS FLLWQS+Y+E++FT WP F D + D+ R R++G+
Sbjct: 211 RTSGEQRLSGFLLWQSAYSEMWFTETHWPAFRRVDFLRALRDYSMRHRRYGK 262
>ref|NP_502142.1| (NM_069741) kinensin-like protein [Caenorhabditis elegans]
pir||T22661 hypothetical protein T01G1.1 - Caenorhabditis elegans
emb|CAB05214.1| (Z82271) Similarity to Mouse kinensin-like protein KIF4
(SW:P33174), contains similarity to Pfam domain: PF00225
(Kinesin motor domain), Score=416.4, E-value=8.6e-122,
N=2; PF00400 (WD domain, G-beta repeat), Score=74.5,
E-value=7.2e-19, N=4; PF01255 (>
emb|CAB07273.1| (Z92811) Similarity to Mouse kinensin-like protein KIF4
(SW:P33174), contains similarity to Pfam domain: PF00225
(Kinesin motor domain), Score=416.4, E-value=8.6e-122,
N=2; PF00400 (WD domain, G-beta repeat), Score=74.5,
E-value=7.2e-19, N=4; PF01255 (>
Length = 1893
Score = 117 bits (293), Expect = 1e-25
Identities = 73/212 (34%), Positives = 116/212 (54%), Gaps = 8/212 (3%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAY-GHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKR 64
+H+A +MDGN R+AK K+ GH+KG L I WC + +T+YAFS EN+KR
Sbjct: 38 RHVAFVMDGNRRFAKTKHLGNVIKGHEKGFTQLAKILDWCNRFGIREITVYAFSIENFKR 97
Query: 65 PKSEVDFLMKM----LKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRH 120
+ EV LM++ +K L D I FR G+ S L+ + +E+ T +
Sbjct: 98 SEEEVSGLMRLAEEKFQKLLNDSEKLD-EKRICFRFYGNRSLLSSRLQKLMSDIEHRTEN 156
Query: 121 FKDFTQVLALNYGSKNELSRAFKSLLES-PPSHINLLESLENEISNRLDTH-DLPEVDLL 178
F + + Y S++E++R+F+++ + +N+ E E+ I LD+ DL
Sbjct: 157 FDGGRLNVCMPYTSRDEIARSFETIRKHVKDGKVNVDEINESMIDACLDSGCGGTSPDLF 216
Query: 179 LRTGGEMRLSNFLLWQSSYAELFFTPILWPDF 210
+RT GE RLS+FL+WQ+S ++F +LWP+F
Sbjct: 217 IRTSGEHRLSDFLMWQASETHVYFDDVLWPEF 248
>ref|NP_572425.1| (NM_132197) CG10778 gene product [Drosophila melanogaster]
gb|AAL39392.1| (AY069247) GM02310p [Drosophila melanogaster]
Length = 300
Score = 114 bits (286), Expect = 7e-25
Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 3/208 (1%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A +MDGN R+A+ + + GH +G + L D WC + + +T +AFS EN+KR
Sbjct: 29 HVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFKRSN 88
Query: 67 SEVDFLMKMLKKY---LKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
EV+ L + ++ L +E + + IR R IG++E +L+ + T
Sbjct: 89 EEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPHDLQKLVASAMLSTERNDK 148
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGG 183
+A Y S++E+++A +++L + + E + L T P DL+ RT G
Sbjct: 149 LFLNVAFAYTSRDEITQAVETILRHGSQDLAGEDISERLLEECLYTRHSPPPDLVFRTSG 208
Query: 184 EMRLSNFLLWQSSYAELFFTPILWPDFT 211
E RLS+F++WQ S + L+F+ +LWP T
Sbjct: 209 ETRLSDFMMWQLSTSVLYFSNVLWPQIT 236
>ref|NP_600218.1| (NC_003450) COG0020:Undecaprenyl pyrophosphate synthase
[Corynebacterium glutamicum]
dbj|BAB98384.1| (AP005277) Undecaprenyl pyrophosphate synthase [Corynebacterium
glutamicum ATCC 13032]
Length = 225
Score = 114 bits (285), Expect = 9e-25
Identities = 73/225 (32%), Positives = 117/225 (51%), Gaps = 8/225 (3%)
Query: 13 DGNGRWAKLKNKAR-AYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDF 71
DGN RWA+ ++GH+ G K + ++ WC + + +T+Y S EN R E+
Sbjct: 3 DGNRRWAREAGFTDVSHGHRVGAKKIGEMVRWCDDVDVNLVTVYLLSMENLGRSSEELQL 62
Query: 72 LMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQVLALN 131
L ++ + DE + N R R +G L+ + + + E T + +A+
Sbjct: 63 LFDIIAD-VADELARP-ETNCRVRLVGHLDLLPDPVACRLRKAEEATVNNTGIAVNMAVG 120
Query: 132 YGSKNELSRAFKSLL----ESPPSHINLLESLE-NEISNRLDTHDLPEVDLLLRTGGEMR 186
YG + E+ A + LL + S L+ES++ + IS L T P+ DL++RT GE R
Sbjct: 121 YGGRQEIVDAVQKLLTIGKDEGLSVDELIESVKVDAISTHLYTSGQPDPDLVIRTSGEQR 180
Query: 187 LSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
LS F+LWQS+Y+E++FT WP F D I D+ +R R+FG+
Sbjct: 181 LSGFMLWQSAYSEIWFTDTYWPAFRRIDFLRAIRDYSQRSRRFGK 225
>ref|NP_594957.1| (NC_003424) putative cis-prenyltransferase; possible secretory
pathway [Schizosaccharomyces pombe]
sp|O14171|YE54_SCHPO Hypothetical protein C4D7.04c in chromosome I
pir||T38795 conserved uncharacterized protein domain-containing protein -
fission yeast (Schizosaccharomyces pombe)
emb|CAB11276.1| (Z98602) putative cis-prenyltransferase; possible secretory pathway
[Schizosaccharomyces pombe]
Length = 264
Score = 112 bits (281), Expect = 3e-24
Identities = 73/223 (32%), Positives = 113/223 (49%), Gaps = 13/223 (5%)
Query: 1 MDNTLK------HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTL 54
M NT+K H+A +MDGN RWA+ + GH G + LK + C ++ ++
Sbjct: 25 MINTIKRGKVPQHIAFVMDGNRRWARQRRMETIEGHSSGFEALKSLLKVCLKLGVKEVSA 84
Query: 55 YAFSTENWKRPKSEVDFLMKMLKKYLKD---ERSTYLNNNIRFRAIGDLEGFSKELRDTI 111
+ FS EN+KR K EVD LM++ K L IR R +GDL ++ +T
Sbjct: 85 FTFSIENFKRSKYEVDMLMEIAKNSLTQITAHGDLVDQYGIRIRIVGDLSRLQPDVLETA 144
Query: 112 LQLENDTRHFKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEI--SNRLDT 169
L+ T+H T + Y S++E++ + +S+++ E ++ +I N L
Sbjct: 145 LKAVEITKHNTKATLNVCFPYTSRHEIATSVQSIVKMAEDGTITPEDIDEDIFEKNLLIK 204
Query: 170 HDLPEVDLLLRTGGEMRLSNFLLWQ-SSYAELFFTPILWPDFT 211
LP +DLL+RT G RLS+F+LWQ E+ F WPDF+
Sbjct: 205 DSLP-LDLLIRTSGVERLSDFMLWQCHKNTEIKFIDFYWPDFS 246
>ref|NP_628046.1| (NC_003888) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
pir||T36727 hypothetical protein SCH69.28c - Streptomyces coelicolor
emb|CAB45225.1| (AL079308) conserved hypothetical protein [Streptomyces coelicolor
A3(2)]
Length = 258
Score = 110 bits (274), Expect = 2e-23
Identities = 73/232 (31%), Positives = 118/232 (50%), Gaps = 9/232 (3%)
Query: 6 KHLAIIMDGNGRWAKLKN-KARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKR 64
+H+ I++DGN RWAK+ G++ G + D WC + ++E +TL+ S +N R
Sbjct: 28 QHIGIMLDGNRRWAKMSGIDDPREGYRAGGAKVLDFLRWCDSAQIEHVTLFMLSDDNLAR 87
Query: 65 PKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDF 124
P+ +++ L+ ++ + + E+ N A+G L+ E + T+ K
Sbjct: 88 PEEQLNPLIDIIAEVV--EQLAAPGNPWPVEAVGALDLLPAESASRLKTATAATQGRKGG 145
Query: 125 TQV-LALNYGSKNELSRAFKSLLESPPSH----INLLESLENE-ISNRLDTHDLPEVDLL 178
T+V +A+ YG + E+ A +S L S +E+ E IS L + E DL+
Sbjct: 146 TKVDVAVGYGGRREIVDAVRSALTEHSSQGGDIDEFIETFTMEHISKHLYSKTRSESDLI 205
Query: 179 LRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
+RT GE RLS FLLWQS+YAE+ F WPDF D + + R R++G
Sbjct: 206 IRTSGEQRLSGFLLWQSAYAEVHFCETYWPDFREIDFLRALRSYSLRERRYG 257
>gb|AAH04117.1|AAH04117 (BC004117) Similar to RIKEN cDNA 3222401G21 gene [Homo sapiens]
Length = 294
Score = 110 bits (274), Expect = 2e-23
Identities = 77/223 (34%), Positives = 111/223 (49%), Gaps = 47/223 (21%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A IMDGN R+AK R GH +G L + WC N + +T+YAFS EN+KR
Sbjct: 27 KHIAFIMDGNRRYAKKCQVERQEGHSQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRS 86
Query: 66 KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
KSEVD LM + + + FS+ + + K F
Sbjct: 87 KSEVDGLMDLAR-----------------------QKFSRLMEE------------KCFL 111
Query: 126 QVLALNYGSKNELSRAFKSLLES------PPSHINLLESLENEISNRLDTHDLPEVDLLL 179
V Y S++E+S A + + PS I+ E+ + L T+ P D+L+
Sbjct: 112 NV-CFAYTSRHEISNAVREMAWGVEQGLLDPSDIS-----ESLLDKCLYTNRSPHPDILI 165
Query: 180 RTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDF 222
RT GE+RLS+FLLWQ+S++ L F P+LWP++T +L I F
Sbjct: 166 RTSGEVRLSDFLLWQTSHSCLVFQPVLWPEYTFWNLFEAILQF 208
>ref|NP_013819.1| (NC_001145) cis-prenyltransferase involved in dolichol synthesis;
Srt1p [Saccharomyces cerevisiae]
sp|Q03175|SRT1_YEAST PUTATIVE DEHYDRODOLICHYL DIPHOSPHATE SYNTHETASE (DEDOL-PP SYNTHASE)
pir||S55087 hypothetical protein YMR101c - yeast (Saccharomyces cerevisiae)
emb|CAA89902.1| (Z49807) unknown [Saccharomyces cerevisiae]
dbj|BAA36578.1| (AB013498) cis-prenyltransferase homologue [Saccharomyces
cerevisiae]
Length = 343
Score = 109 bits (273), Expect = 2e-23
Identities = 76/242 (31%), Positives = 123/242 (50%), Gaps = 24/242 (9%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H++ IMDGN R+AK + GH+ G TL + C ++C++ YAFS EN+ RP
Sbjct: 68 EHVSFIMDGNRRYAKSRRLPVKKGHEAGGLTLLTLLYICKRLGVKCVSAYAFSIENFNRP 127
Query: 66 KSEVDFLMKM-------LKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDT 118
K EVD LM + K KD + + IR +GD S E+R I ++E T
Sbjct: 128 KEEVDTLMNLFTVKLDEFAKRAKDYKDPLYGSKIRI--VGDQSLLSPEMRKKIKKVEEIT 185
Query: 119 RHFKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDL------ 172
+ DFT + Y S+N++ + +E + LE+ I+ R T+ +
Sbjct: 186 QDGDDFTLFICFPYTSRNDMLHTIRDSVE------DHLENKSPRINIRKFTNKMYMGFHS 239
Query: 173 PEVDLLLRTGGEMRLSNFLLWQ-SSYAELFFTPILWPDFTPKDLENIIS--DFYKRVRKF 229
+ +LL+RT G RLS+++LWQ A + F+ LWP+F+ + +I F+ ++K+
Sbjct: 240 NKCELLIRTSGHRRLSDYMLWQVHENATIEFSDTLWPNFSFFAMYLMILKWSFFSTIQKY 299
Query: 230 GE 231
E
Sbjct: 300 NE 301
>emb|CAD21109.1| (AL669990) probable cis-prenyltransferase [Neurospora crassa]
Length = 283
Score = 109 bits (273), Expect = 2e-23
Identities = 69/231 (29%), Positives = 120/231 (51%), Gaps = 10/231 (4%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+A +MDGN R+A+ GH G + L + C +E +T+YAFS EN+ RP
Sbjct: 41 RHVAFVMDGNRRYARSHKIETIEGHHLGFEALARVLEICYKCGVEVVTVYAFSIENFNRP 100
Query: 66 KSEVDFLMKMLKKYLKD--ERSTYLNN-NIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
K EVD LM++ K L+ + L R +G+ + S ++ + I + + T++ K
Sbjct: 101 KYEVDGLMQLAKVKLEQLIQHGELLERYGASVRVLGERDLLSDDVLEVIDRAVSTTKNNK 160
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTH----DLPEVDLL 178
+ Y S+ E++ A +S S +H+ + ++EN + +D H D P +D+
Sbjct: 161 KCILNICFPYTSREEMTTAIRSTDGS--NHVTIYPNVENITTETIDKHMYTADCPPLDIF 218
Query: 179 LRTGGEMRLSNFLLWQSSY-AELFFTPILWPDFTPKDLENIISDFYKRVRK 228
+RT G RLS+F+LWQ ++FF WP+F + ++ ++ R +K
Sbjct: 219 VRTSGVERLSDFMLWQCHQDTQMFFLKCFWPEFDLRHFLPVLLEWQWRQKK 269
>dbj|BAA78751.1| (AB023482) ESTs C72761(E2193),AU056875(S20945), AU056876(S20945)
correspond to a region of the predicted gene.~Similar to
Thermus thermophilus gene for homocitrate synthase,
homoaconitate hydratase, and ORF,complete and partial
cds.(AB018379) [Oryza sa>
Length = 299
Score = 106 bits (264), Expect = 2e-22
Identities = 70/225 (31%), Positives = 118/225 (52%), Gaps = 15/225 (6%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A IMDGN R+AK ++ GH+ G L ++C ++ +T+YAFS +N+KR
Sbjct: 50 KHIAFIMDGNRRYAKFRSIQEGSGHRVGFSALIASLLYCYEMGVKYITVYAFSIDNFKRD 109
Query: 66 KSEVDFLMKMLKKYLKD--ERSTYLNN-NIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
+EV LM+++++ + + E +N N + G+L+ SK +R +L T
Sbjct: 110 PTEVKSLMELMEEKINELLENRNVINKVNCKINFWGNLDMLSKSVRVAAEKLMATTAENT 169
Query: 123 DFTQVLALNYGSKNELSRAF-------KSLLESPPSHINLLESLENEIS-NRLDTH---- 170
+ + Y S +E+ A + +L+ + + ++IS LD H
Sbjct: 170 GLVFSVCMPYNSTSEIVNAVNKVCAERRDILQREDADSVANNGVYSDISVADLDRHMYSA 229
Query: 171 DLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDL 215
P+ D+++RT GE RLSNFLLWQ++++ L LWP+F+ K L
Sbjct: 230 GCPDPDIVIRTSGETRLSNFLLWQTTFSHLQNPDPLWPEFSFKHL 274
>ref|NP_009556.1| (NC_001134) cis-prenyltransferase involved in dolichol synthesis;
Rer2p [Saccharomyces cerevisiae]
sp|P35196|RER2_YEAST Dehydrodolichyl diphosphate synthetase (DEDOL-PP synthase)
pir||S44561 hypothetical protein YBR002c - yeast (Saccharomyces cerevisiae)
emb|CAA81271.1| (Z26494) unknown [Saccharomyces cerevisiae]
emb|CAA84938.1| (Z35871) ORF YBR002c [Saccharomyces cerevisiae]
dbj|BAA36577.1| (AB013497) cis-prenyltransferase [Saccharomyces cerevisiae]
prf||2118405F ORF YBR0107 [Saccharomyces cerevisiae]
Length = 286
Score = 102 bits (254), Expect = 3e-21
Identities = 67/222 (30%), Positives = 109/222 (48%), Gaps = 8/222 (3%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+H+ IMDGN R+A+ K GH+ G ++ I C ++ T++AFS EN+KR
Sbjct: 33 RHVGFIMDGNRRFARKKEMDVKEGHEAGFVSMSRILELCYEAGVDTATVFAFSIENFKRS 92
Query: 66 KSEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
EV+ LM + ++ ++ + +R + IGDL K L + + T++ K
Sbjct: 93 SREVESLMTLARERIRQITERGELACKYGVRIKIIGDLSLLDKSLLEDVRVAVETTKNNK 152
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTG 182
T + Y + E+ A K E+ H E+ + + L T +P +DLL+RT
Sbjct: 153 RATLNICFPYTGREEILHAMK---ETIVQHKKGAAIDESTLESHLYTAGVPPLDLLIRTS 209
Query: 183 GEMRLSNFLLWQSSY--AELFFTPILWPDFTPKDLENIISDF 222
G RLS+FL+WQ+S + LWP+F P + I+ F
Sbjct: 210 GVSRLSDFLIWQASSKGVRIELLDCLWPEFGPIRMAWILLKF 251
>gb|AAA96784.1| (U51683) ORF1; open reading frame in cdsA 5' region; hypothetical
protein [Brucella melitensis biovar Abortus]
Length = 153
Score = 102 bits (254), Expect = 3e-21
Identities = 53/125 (42%), Positives = 76/125 (60%), Gaps = 1/125 (0%)
Query: 107 LRDTILQLENDTRHFKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISN 165
+R + + E+ T V+A NYGS++E+ RA +SL + + S+ E +S
Sbjct: 5 IRALLNEAESLTHRNTGLNLVIAFNYGSRDEIVRAVRSLARDVAAGLLDPSSISAELVSA 64
Query: 166 RLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKR 225
LDT +P+ DL++RT GEMRLSNFLLWQ++Y+E F P WPDF P DL+ F +R
Sbjct: 65 NLDTAGIPDPDLIIRTSGEMRLSNFLLWQAAYSEFLFLPCHWPDFRPADLDAAYETFRQR 124
Query: 226 VRKFG 230
R+FG
Sbjct: 125 ERRFG 129
>gb|AAF46296.1| (AE003442) CG10778 gene product [Drosophila melanogaster]
Length = 240
Score = 99.0 bits (245), Expect = 4e-20
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 3/191 (1%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A +MDGN R+A+ + + GH +G + L D WC + + +T +AFS EN+KR
Sbjct: 29 HVAFVMDGNRRFARSQQIDKIEGHSRGFEKLADCLRWCLDVGVREVTTFAFSIENFKRSN 88
Query: 67 SEVDFLMKMLKK---YLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
EV+ L + ++ L +E + + IR R IG++E +L+ + T
Sbjct: 89 EEVEGLFNLAREKFARLLEETARLDEHGIRIRVIGNIELLPHDLQKLVASAMLSTERNDK 148
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGG 183
+A Y S++E+++A +++L + + E + L T P DL+ RT G
Sbjct: 149 LFLNVAFAYTSRDEITQAVETILRHGSQDLAGEDISERLLEECLYTRHSPPPDLVFRTSG 208
Query: 184 EMRLSNFLLWQ 194
E RLS+F++WQ
Sbjct: 209 ETRLSDFMMWQ 219
>dbj|BAB83522.1| (AB064661) cis-prenyltransferase [Hevea brasiliensis]
Length = 284
Score = 98.6 bits (244), Expect = 5e-20
Identities = 70/229 (30%), Positives = 110/229 (47%), Gaps = 33/229 (14%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A I+DGNGR+AK GHK G L ++ +C ++ T+YAFS +N++R
Sbjct: 35 HIAFILDGNGRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAFSIDNFRRKP 94
Query: 67 SEVDFLMKMLKKYLKD---ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
EV ++M ++ + ++ E S +I R +G+L+ + L+ ++ T
Sbjct: 95 HEVQYVMNLMLEKIEGMIMEESIINAYDICVRFVGNLKLLDEPLKTAADKIMRATAKNSK 154
Query: 124 FTQVLALNYGSKNELSRAF----KSLLES-------------------PPSHINLLESLE 160
F +LA+ Y S +E+ A K L+S P S I L+E
Sbjct: 155 FVLLLAVCYTSTDEIVHAVEESSKDKLKSDEICNDGNGDCVIKIEEMEPYSEIKLVELER 214
Query: 161 NEISNRLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPD 209
N N P D+L+RT GE RLSN+LLWQ++ L+ LWP+
Sbjct: 215 NTYIN-------PYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 256
>dbj|BAB71777.1| (AB061237) cis-prenyltransferase [Hevea brasiliensis]
Length = 284
Score = 96.3 bits (238), Expect = 2e-19
Identities = 69/229 (30%), Positives = 111/229 (48%), Gaps = 33/229 (14%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A I+DGN R+AK GHK G L ++ +C ++ T+YAFS +N++R
Sbjct: 35 HIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAFSIDNFRRKP 94
Query: 67 SEVDFLMKMLKKYLKD---ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
EV ++M ++ + ++ E S +I R +G+L+ S+ ++ ++ T +
Sbjct: 95 HEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADKIMRATANNSK 154
Query: 124 FTQVLALNYGSKNELSRAF----KSLLES-------------------PPSHINLLESLE 160
F +LA+ Y S +E+ A K L+S P S I L+E
Sbjct: 155 FVLLLAVCYTSTDEIVHAVEESSKDKLKSNEICNDGNGDCVIKIEEMEPYSEIKLVELER 214
Query: 161 NEISNRLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPD 209
N N P D+L+RT GE RLSN+LLWQ++ L+ LWP+
Sbjct: 215 NTYIN-------PYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 256
>gb|AAM65193.1| (AY087655) undecaprenyl diphosphate synthase [Arabidopsis thaliana]
Length = 272
Score = 96.3 bits (238), Expect = 2e-19
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 5/208 (2%)
Query: 7 HLAIIMDGNGRWAKLKN-KARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+++ IMDGN R+AK +N + GH+ G ++K I +C + +TLYAF +N+KR
Sbjct: 38 NISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFKRG 97
Query: 66 KSEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
EV +M ++ + ++ D+ + N +R GDL ++ R +L T +
Sbjct: 98 PEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKLMELTEENR 157
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLE-NEISNRLDTHDLPEVDLLLRT 181
D V+ + Y + E+ A + + +LE ++I + T +P DL++RT
Sbjct: 158 DLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELSDIEECMYTSVVPVPDLMVRT 217
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPD 209
GG RLSNF+ WQ+S A L T LWP+
Sbjct: 218 GGGDRLSNFMTWQTSRALLHRTEALWPE 245
>dbj|BAB08234.1| (AB011483) undecaprenyl pyrophosphate synthetase-like protein
[Arabidopsis thaliana]
Length = 251
Score = 95.9 bits (237), Expect = 3e-19
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 5/208 (2%)
Query: 7 HLAIIMDGNGRWAKLKN-KARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+++ IMDGN R+AK +N + GH+ G ++K I +C + +TLYAF +N+KR
Sbjct: 17 NISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFKRG 76
Query: 66 KSEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
EV +M ++ + ++ D+ + N +R GDL ++ R +L T +
Sbjct: 77 PEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKLMELTEENR 136
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLE-NEISNRLDTHDLPEVDLLLRT 181
D V+ + Y + E+ A + + +LE ++I + T +P DL++RT
Sbjct: 137 DLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELSDIEECMYTSVVPVPDLVVRT 196
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPD 209
GG RLSNF+ WQ+S A L T LWP+
Sbjct: 197 GGGDRLSNFMTWQTSRALLHRTEALWPE 224
>ref|NP_200859.1| (NM_125444) undecaprenyl diphosphate synthase [Arabidopsis
thaliana]
Length = 272
Score = 95.9 bits (237), Expect = 3e-19
Identities = 65/208 (31%), Positives = 108/208 (51%), Gaps = 5/208 (2%)
Query: 7 HLAIIMDGNGRWAKLKN-KARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+++ IMDGN R+AK +N + GH+ G ++K I +C + +TLYAF +N+KR
Sbjct: 38 NISFIMDGNRRFAKKRNLEGLDAGHRAGFISVKYILQYCKEIGVPYVTLYAFGMDNFKRG 97
Query: 66 KSEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
EV +M ++ + ++ D+ + N +R GDL ++ R +L T +
Sbjct: 98 PEEVKCVMDLMLEKVELTIDQAVSGNMNGVRIIFAGDLNSLNERFRAATKKLMELTEENR 157
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLE-NEISNRLDTHDLPEVDLLLRT 181
D V+ + Y + E+ A + + +LE ++I + T +P DL++RT
Sbjct: 158 DLIVVVCVAYSTSVEIVHAVRDSCVRKSKTGDGSSALELSDIEECMYTSVVPVPDLVVRT 217
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPD 209
GG RLSNF+ WQ+S A L T LWP+
Sbjct: 218 GGGDRLSNFMTWQTSRALLHRTEALWPE 245
>ref|NP_565420.1| (NM_127311) expressed protein [Arabidopsis thaliana]
gb|AAD32914.2| (AC007584) expressed protein [Arabidopsis thaliana]
Length = 295
Score = 94.4 bits (233), Expect = 9e-19
Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 24/242 (9%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A IMDGN R+AK GHK G L + +C ++ +T+YAFS +N++R
Sbjct: 42 HIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYCYELGIKYVTIYAFSIDNFRRKP 101
Query: 67 SEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
EV+ +M ++ + +K ++ S IR IG+L + ++R ++ T
Sbjct: 102 EEVESVMDLMLEKIKSLLEKESIVHQYGIRVYFIGNLALLNDQVRAAAEKVMKATAKNSR 161
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLE-------------SLEN--------E 162
++ + Y S +E+ +A K + +I +EN +
Sbjct: 162 VVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHEDSDSDIEGTDMENQEKKIQLVD 221
Query: 163 ISNRLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDF 222
I + P D+L+R+ GE RLSNFLLWQ+ +L LWP+ + L I +F
Sbjct: 222 IEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPEIGLRHLLWAILNF 281
Query: 223 YK 224
+
Sbjct: 282 QR 283
>gb|AAM19345.1|AF499435_1 (AF499435) hypothetical protein [Arabidopsis thaliana]
Length = 295
Score = 92.4 bits (228), Expect = 4e-18
Identities = 65/242 (26%), Positives = 110/242 (44%), Gaps = 24/242 (9%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A IMDGN R+AK GHK G L + +C ++ +T+YAFS +N++R
Sbjct: 42 HIAFIMDGNRRYAKKCGLLDGSGHKAGFSALMSMLQYCYELGIKYVTIYAFSIDNFRRKP 101
Query: 67 SEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
E + +M ++ + +K ++ S IR IG+L + ++R ++ T
Sbjct: 102 EEXESVMDLMLEKIKSLLEKESIVHQYGIRVYFIGNLALLNDQVRAAAEKVMKATAKNSR 161
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLE-------------SLEN--------E 162
++ + Y S +E+ +A K + +I +EN +
Sbjct: 162 VVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYKHEDSDSDIEGTDMENQEKKIQLVD 221
Query: 163 ISNRLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDF 222
I + P D+L+R+ GE RLSNFLLWQ+ +L LWP+ + L I +F
Sbjct: 222 IEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNTQLCSPAALWPEIGLRHLLWAILNF 281
Query: 223 YK 224
+
Sbjct: 282 QR 283
>dbj|BAB08233.1| (AB011483) undecaprenyl pyrophosphate synthetase-like protein
[Arabidopsis thaliana]
Length = 251
Score = 92.4 bits (228), Expect = 4e-18
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 5/208 (2%)
Query: 7 HLAIIMDGNGRWAKLKNKARA-YGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+++ IMDGN R+AK N GH+ G ++K I +C + +TL+AF +N+KR
Sbjct: 17 NISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCKEIGVPYVTLHAFGMDNFKRG 76
Query: 66 KSEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
EV +M ++ + ++ D+ + N +R GDL+ ++ R +L T +
Sbjct: 77 PEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAGDLDSLNEHFRAATKKLMELTEENR 136
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLE-NEISNRLDTHDLPEVDLLLRT 181
D V+ + Y + E+ A + ++ + L LE +++ + T +P DL++RT
Sbjct: 137 DLIVVVCVAYSTSLEIVHAVRKSCVRKCTNGDDLVLLELSDVEECMYTSIVPVPDLVIRT 196
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPD 209
GG RLSNF+ WQ+S + L T LWP+
Sbjct: 197 GGGDRLSNFMTWQTSRSLLHRTEALWPE 224
>ref|NP_200858.1| (NM_125443) undecaprenyl diphosphate synthase [Arabidopsis
thaliana]
gb|AAM62714.1| (AY085488) undecaprenyl diphosphate synthase [Arabidopsis thaliana]
Length = 271
Score = 92.4 bits (228), Expect = 4e-18
Identities = 63/208 (30%), Positives = 109/208 (52%), Gaps = 5/208 (2%)
Query: 7 HLAIIMDGNGRWAKLKNKARA-YGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
+++ IMDGN R+AK N GH+ G ++K I +C + +TL+AF +N+KR
Sbjct: 37 NISFIMDGNRRFAKKHNLIGLDAGHRAGFISVKYILQYCKEIGVPYVTLHAFGMDNFKRG 96
Query: 66 KSEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
EV +M ++ + ++ D+ + N +R GDL+ ++ R +L T +
Sbjct: 97 PEEVKCVMDLMLEKVELAIDQAVSGNMNGVRIIFAGDLDSLNEHFRAATKKLMELTEENR 156
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLE-NEISNRLDTHDLPEVDLLLRT 181
D V+ + Y + E+ A + ++ + L LE +++ + T +P DL++RT
Sbjct: 157 DLIVVVCVAYSTSLEIVHAVRKSCVRKCTNGDDLVLLELSDVEECMYTSIVPVPDLVIRT 216
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPD 209
GG RLSNF+ WQ+S + L T LWP+
Sbjct: 217 GGGDRLSNFMTWQTSRSLLHRTEALWPE 244
>sp|P38118|YARF_CORGL Hypothetical 26.1 kDa protein in AROF 3'region
Length = 234
Score = 92.0 bits (227), Expect = 5e-18
Identities = 67/208 (32%), Positives = 103/208 (49%), Gaps = 12/208 (5%)
Query: 13 DGNGRWAKLKNKAR-AYGHKKGVKTLKDITIWCAN--HKLECLTLYAFSTENWKRPKSEV 69
DGN RWA+ ++GH+ G K +D WCA + + +Y S EN R E+
Sbjct: 3 DGNRRWAREAGFTDVSHGHRVGAKRSRDGR-WCAGVMSRRQSRDVYLLSMENLGRSSEEL 61
Query: 70 DFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQVLA 129
L + + DE + R R +G L+ + + + E T + +A
Sbjct: 62 QLLFDIAD--VADELARP-ETKCRVRLVGHLDLVPDPVACRLRKAEEATVNNTGIAVNMA 118
Query: 130 LNYGSKNELSRAFKSLL----ESPPSHINLLESLE-NEISNRLDTHDLPEVDLLLRTGGE 184
+ YG + E+ A + LL + S L+ES++ + IS L T P+ DL++RT GE
Sbjct: 119 VGYGGRQEIVDAVQKLLTIGKDEGLSVDELIESVKVDAISTHLYTSGQPDPDLVIRTSGE 178
Query: 185 MRLSNFLLWQSSYAELFFTPILWPDFTP 212
RLS F+LWQS+Y+E++FT WP F P
Sbjct: 179 QRLSGFMLWQSAYSEIWFTDTYWPAFRP 206
>dbj|BAB92023.1| (AB074306) cis-prenyltransferase1 [Hevea brasiliensis]
Length = 290
Score = 91.3 bits (225), Expect = 8e-18
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 25/228 (10%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A I+DGN R+AK GHK G L ++ +C ++ T+YAFS +N++R
Sbjct: 35 HIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAFSIDNFRRKP 94
Query: 67 SEVDFLMKMLKKYLKD---ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
EV ++M ++ + ++ E S +I R +G+L+ S+ ++ ++ T +
Sbjct: 95 HEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADKIMRATANNSK 154
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLEN----------EISN-------- 165
++A+ Y S +E+ A + E + + + LE +I N
Sbjct: 155 CVLLIAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSGTVIQIENMESYSGIK 214
Query: 166 ----RLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPD 209
+T+ P D+L+RT GE RLSN+LLWQ++ L+ LWP+
Sbjct: 215 LVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 262
>dbj|BAB71776.1| (AB061234) cis-prenyltransferase [Hevea brasiliensis]
Length = 290
Score = 91.3 bits (225), Expect = 8e-18
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 25/228 (10%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A I+DGN R+AK GHK G L ++ +C ++ T+YAFS +N++R
Sbjct: 35 HIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAFSIDNFRRKP 94
Query: 67 SEVDFLMKMLKKYLKD---ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
EV ++M ++ + ++ E S +I R +G+L+ S+ ++ ++ T +
Sbjct: 95 HEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADKIMRATANNSK 154
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLEN----------EISN-------- 165
++A+ Y S +E+ A + E + + + LE +I N
Sbjct: 155 CVLLIAVCYTSTDEIVHAVEESSELNSNEVCNNQELEEANATGSGTVIQIENMESYSGIK 214
Query: 166 ----RLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPD 209
+T+ P D+L+RT GE RLSN+LLWQ++ L+ LWP+
Sbjct: 215 LVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILYSPHALWPE 262
>dbj|BAB92024.1| (AB074307) cis-prenyltransferase2 [Hevea brasiliensis]
Length = 290
Score = 89.7 bits (221), Expect = 2e-17
Identities = 63/228 (27%), Positives = 110/228 (47%), Gaps = 25/228 (10%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+A I+DGN R+AK GHK G L ++ +C ++ T+YAFS +N++R
Sbjct: 35 HIAFILDGNRRFAKKHKLPEGGGHKAGFLALLNVLTYCYELGVKYATIYAFSIDNFRRKP 94
Query: 67 SEVDFLMKMLKKYLKD---ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKD 123
EV ++M ++ + ++ E S +I R +G+L+ S+ ++ ++ T +
Sbjct: 95 HEVQYVMDLMLEKIEGMIMEESIINAYDICVRFVGNLKLLSEPVKTAADKIMRATANNSK 154
Query: 124 FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLEN----------EISN-------- 165
++A+ Y S +E+ A + E + + + LE +I N
Sbjct: 155 CVLLIAVCYTSTDEIVHAVEESSELNSNEVCANQELEEANATGSGTVIQIENMESYSGIK 214
Query: 166 ----RLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPD 209
+T+ P D+L+RT GE RLSN+LLWQ++ L LWP+
Sbjct: 215 LVDLEKNTYINPYPDVLIRTSGETRLSNYLLWQTTNCILDSPHALWPE 262
>gb|AAB61966.1| (U60831) ORF1 [Haemophilus influenzae]
Length = 106
Score = 86.3 bits (212), Expect = 3e-16
Identities = 42/103 (40%), Positives = 61/103 (58%), Gaps = 1/103 (0%)
Query: 129 ALNYGSKNELSRAFKSLLESPPSHINLLESLENE-ISNRLDTHDLPEVDLLLRTGGEMRL 187
A NYG ++ +A K + E + + N + L T + P VDLL+RT GE R+
Sbjct: 1 AANYGGCWDIIQAAKQIAEKVKKEEMSVSDINNSTFQHHLATQNAPPVDLLIRTSGEQRI 60
Query: 188 SNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
SNFLLWQ +YAEL+F+ +LWPDF + I+ + +R R+FG
Sbjct: 61 SNFLLWQIAYAELYFSDVLWPDFNQLEFNRAIASYQQRHRRFG 103
>ref|NP_147911.1| (NC_000854) hypothetical protein [Aeropyrum pernix]
pir||H72615 hypothetical protein APE1385 - Aeropyrum pernix (strain K1)
dbj|BAA80382.1| (AP000061) 219aa long hypothetical protein [Aeropyrum pernix]
Length = 219
Score = 85.5 bits (210), Expect = 4e-16
Identities = 62/228 (27%), Positives = 105/228 (45%), Gaps = 21/228 (9%)
Query: 8 LAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANH--KLECLTLYAFSTENW-KR 64
+ II DGN RWA L+ + + G + +K I + + + + LY S +N KR
Sbjct: 7 IGIIPDGNRRWASLRGENLYIAYYTGYRNVKRILTYIRDFYPAIRSVYLYVLSRDNCSKR 66
Query: 65 PKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLE--GFSKELRDTILQLENDTRHFK 122
++E+ L +++++ ++ + + +GD+ +R+++ D
Sbjct: 67 SRAELSILYRIMRRSIERDIAEIEKGGASLVIVGDINHPNLPDNIRESLAPYHFD----- 121
Query: 123 DFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTG 182
+ L GS + R L P +E+ L + L E+DL++RTG
Sbjct: 122 -----MYLKKGSLPDGRRVVAGLCYDP------FWEIEHYTPKTLPSRLLDEIDLVIRTG 170
Query: 183 GEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
GE RLS+F + YAEL+F LWPDFT +DL+ + F R R G
Sbjct: 171 GEKRLSSFFPLLTRYAELYFIDKLWPDFTREDLDRAVQWFSTRRRPMG 218
>ref|NP_616757.1| (NC_003552) di-trans-poly-cis-decaprenylcistransferase
[Methanosarcina acetivorans str. C2A] [Methanosarcina
acetivorans C2A]
gb|AAM05237.1| (AE010863) di-trans-poly-cis-decaprenylcistransferase
[Methanosarcina acetivorans str. C2A] [Methanosarcina
acetivorans C2A]
Length = 224
Score = 84.7 bits (208), Expect = 7e-16
Identities = 65/223 (29%), Positives = 112/223 (50%), Gaps = 28/223 (12%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP- 65
H+AII DGN RWA + + G+K G+ ++ C + +T + F+ +N KRP
Sbjct: 17 HIAIIPDGNRRWALDRGLEKHEGYKHGIVPGLELYDICVKIGIGEVTFFGFTQDNTKRPQ 76
Query: 66 ---KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
K+ VD +K +K+ K + + N + + F KEL L T+ K
Sbjct: 77 IQRKAFVDACIKSVKELSKHDAELLVVGNT------NSDMFPKEL----LAYTKRTKFGK 126
Query: 123 DFTQV-LALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRT 181
++ +NYG +L+ AF++ +S + +EN + + ++P +DLL+R
Sbjct: 127 GKVRINFLVNYGWYWDLTYAFENSSDSK-------KMIEN-----IASAEIPRIDLLIRW 174
Query: 182 GGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYK 224
GG RLS L Q+ Y++++ +WPDF P+ L N + +FY+
Sbjct: 175 GGRRRLSGMLPVQTVYSDIYVVDEMWPDFKPEHLFNAL-EFYQ 216
>gb|AAD09946.1| (AF064963) unknown [Coxiella burnetii]
Length = 157
Score = 82.0 bits (201), Expect = 5e-15
Identities = 47/133 (35%), Positives = 71/133 (53%), Gaps = 5/133 (3%)
Query: 6 KHLAIIMDGNGRWA---KLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENW 62
+H+AI+M +W+ + R GH+ G K ++ I + A LE LTL+AFS EN
Sbjct: 27 RHVAIVM--GRQWSGGLTRRGLPRVAGHRAGAKVVRRIVEYAAEKPLEVLTLFAFSIENR 84
Query: 63 KRPKSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
RP+SEV+FLM + LK NN++ R IGD F K++ I ++ T+H
Sbjct: 85 ARPQSEVNFLMSLFLDSLKKNTEELHKNNVQLRVIGDHREFDKKMLAQIQTSQDLTKHNT 144
Query: 123 DFTQVLALNYGSK 135
++ALNY +
Sbjct: 145 GLKLIIALNYSGR 157
>ref|NP_633107.1| (NC_003901) Undecaprenyl pyrophosphate synthetase [Methanosarcina
mazei Goe1]
gb|AAM30779.1| (AE013336) Undecaprenyl pyrophosphate synthetase [Methanosarcina
mazei Goe1]
Length = 224
Score = 80.1 bits (196), Expect = 2e-14
Identities = 45/118 (38%), Positives = 75/118 (63%), Gaps = 6/118 (5%)
Query: 116 NDTRHFKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLP-- 173
N +R KDF L+L +G + E++RA S+L+ + E ++ ++ L++H L
Sbjct: 111 NCSRQGKDFFVYLSLGFGGRGEITRAVISILDEVKAGRIRPEEVDEKM---LESHLLVKH 167
Query: 174 EVDLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
E D+++R+GG+ +LS+FL+WQS Y+EL+FT + W D DL +I DF KR R++G+
Sbjct: 168 EPDIMIRSGGQ-KLSDFLVWQSVYSELYFTDVNWKDVRKIDLLRVIRDFQKRQRRYGK 224
>ref|NP_619264.1| (NC_003552) undecaprenyl diphosphate synthase [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
gb|AAM07744.1| (AE011160) undecaprenyl diphosphate synthase [Methanosarcina
acetivorans str. C2A] [Methanosarcina acetivorans C2A]
Length = 224
Score = 79.3 bits (194), Expect = 3e-14
Identities = 44/116 (37%), Positives = 74/116 (62%), Gaps = 6/116 (5%)
Query: 118 TRHFKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLP--EV 175
+R KDF ++L +G + E++RA S+LE + E ++ ++ L++H L E
Sbjct: 113 SRQGKDFFVYVSLGFGGRGEITRAVLSILEEVKTGSVSPEEVDEKM---LESHLLVKHEP 169
Query: 176 DLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFGE 231
D+++R+GG+ +LS+FL+WQS Y+EL+FT + W D DL +I DF KR R++G+
Sbjct: 170 DIMIRSGGQ-KLSDFLVWQSVYSELYFTDVNWKDVRRIDLLRVIRDFQKRQRRYGK 224
>ref|NP_562474.1| (NC_003366) probable di-trans, poly-cis-decaprenylcistransferase
[Clostridium perfringens]
dbj|BAB81264.1| (AP003191) probable di-trans, poly-cis-decaprenylcistransferase
[Clostridium perfringens]
Length = 213
Score = 75.9 bits (185), Expect = 3e-13
Identities = 59/222 (26%), Positives = 103/222 (45%), Gaps = 33/222 (14%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+ +I DGN RWA + G+ G++ ++ C ++ +T Y F+T+N KRP
Sbjct: 5 KHIGVIPDGNRRWAVENGLEKDQGYLHGIEPGLELFKLCQKLDIKEITYYGFTTDNTKRP 64
Query: 66 ----KSEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
K+ +D +K ++ ++ + N D F +EL+ + T+
Sbjct: 65 SYQKKAFIDACIKSVELIANEDCELLVIGN------ADSPVFPEELK----KYTKRTKMG 114
Query: 122 KDFTQV-LALNYGSKNELSRAFKSLLESPPSHINLLESLE---NEISNRLDTHDLPEVDL 177
K +V +NYG + +L NLL++ + I + + + D+ +DL
Sbjct: 115 KGGIRVNFLVNYGWEWDL---------------NLLKACDIKSKNIYDNIQSKDISRIDL 159
Query: 178 LLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENII 219
L+R GG RLS FL QS Y++++ LWP+F N +
Sbjct: 160 LIRWGGRRRLSGFLPVQSVYSDIYIIDDLWPNFNKDHFFNAL 201
>dbj|BAB23728.1| (AK004993) Putative undecaprenyl diphosphate synthase containing
protein~data source:Pfam, source key:PF01255,
evidence:ISS~putative [Mus musculus]
Length = 146
Score = 75.9 bits (185), Expect = 3e-13
Identities = 43/119 (36%), Positives = 66/119 (55%), Gaps = 3/119 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRP 65
KH+A IMDGN R+AK R GH +G L + WC N + +T+YAFS EN+KR
Sbjct: 27 KHIAFIMDGNRRYAKKCQVERQEGHTQGFNKLAETLRWCLNLGILEVTVYAFSIENFKRS 86
Query: 66 KSEVDFLMKMLKK---YLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHF 121
KSEVD L+ + ++ L +E+ + + R +GDL +L++ I T+++
Sbjct: 87 KSEVDGLLDLARQKFSCLMEEQEKLQKHGVCIRVLGDLHLPPLDLQEKIAHAIQATKNY 145
>ref|NP_348060.1| (NC_003030) Undecaprenyl pyrophosphate synthase related enzyme
[Clostridium acetobutylicum]
gb|AAK79400.1|AE007654_9 (AE007654) Undecaprenyl pyrophosphate synthase related enzyme
[Clostridium acetobutylicum]
Length = 213
Score = 74.3 bits (181), Expect = 1e-12
Identities = 59/225 (26%), Positives = 101/225 (44%), Gaps = 30/225 (13%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
H+ II DGN RWA K ++ G+ G+ + C ++ +T Y F+ +N KRPK
Sbjct: 6 HIGIIPDGNRRWAVSKGMSKEEGYNPGISPGLQLLRLCKQVGIKEVTYYGFTVDNTKRPK 65
Query: 67 SE----VDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFK 122
++ D +K + K+ S + N + + F KEL + F
Sbjct: 66 NQRLAFTDACIKAVDVISKENASLLVVGNT------ESDMFPKELLP-----YTKRKSFG 114
Query: 123 D--FTQVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLR 180
D +NYG + +L++ I E ++ + +++ + VDL++R
Sbjct: 115 DGGIKVNFLVNYGWEWDLNK------------IKEGEKSSKKVVSYINSSYISRVDLIIR 162
Query: 181 TGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKR 225
GG RLS FL QS Y++ + WPDF P+ + + D+Y +
Sbjct: 163 WGGRRRLSGFLPVQSIYSDFYVVDDYWPDFKPEHFFDAL-DWYSK 206
>ref|NP_080420.1| (NM_026144) RIKEN cDNA 3222401G21 [Mus musculus]
dbj|BAB29268.1| (AK014317) Putative undecaprenyl diphosphate synthase containing
protein~data source:Pfam, source key:PF01255,
evidence:ISS~putative [Mus musculus]
Length = 229
Score = 71.2 bits (173), Expect = 9e-12
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 15/151 (9%)
Query: 82 DERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQVLALNYGSKNELSRA 141
+E+ + + R +GDL +L++ I T+++ + Y S++E++ A
Sbjct: 2 EEQEKLQKHGVCIRVLGDLHLLPLDLQEKIAHAIQATKNYNKCFLNVCFAYTSRHEIANA 61
Query: 142 FKS--------LLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEMRLSNFLLW 193
+ LLE PS ++ E+ + L ++ P D+L+RT GE+RLS+FLLW
Sbjct: 62 VREMAWGVEQGLLE--PSDVS-----ESLLDKCLYSNHSPHPDILIRTSGEVRLSDFLLW 114
Query: 194 QSSYAELFFTPILWPDFTPKDLENIISDFYK 224
Q+S++ L F P+LWP++T +L I F +
Sbjct: 115 QTSHSCLVFQPVLWPEYTFWNLCEAILQFQR 145
>ref|NP_597112.1| (NC_003238) UNDECAPRENYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon
cuniculi]
emb|CAD27160.1| (AL590451) UNDECAPRENYL PYROPHOSPHATE SYNTHETASE [Encephalitozoon
cuniculi]
Length = 270
Score = 70.9 bits (172), Expect = 1e-11
Identities = 49/210 (23%), Positives = 101/210 (47%), Gaps = 30/210 (14%)
Query: 7 HLAIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPK 66
++A I DGN R+A+ ++ KG++ + + + + ++ ++ + F+ N+KR
Sbjct: 74 NIAFICDGNRRYARKLGLEDSFIKDKGLQKIYEFIEFGCFYGIKEISFFCFALSNFKRSP 133
Query: 67 SEVDFLMKMLKKYLKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFTQ 126
EV+ LM ++K+ K ER + +FR G L+ +++R ++ +E ++++
Sbjct: 134 EEVNKLMGLVKQ--KIERPKEIGIRPKFRVYGRLDLLEEDVRKRLMDIEEESKNNTSIIV 191
Query: 127 VLALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEMR 186
+ Y +++E++R + ++H VD+L+RT R
Sbjct: 192 NIFFAYSAEDEITRGI-----------------------QFNSH----VDILIRTSNTKR 224
Query: 187 LSNFLLWQ-SSYAELFFTPILWPDFTPKDL 215
LSNF++ Q + +FF LWP+ T L
Sbjct: 225 LSNFMIRQVAKGTSVFFAKALWPELTTAHL 254
>gb|AAK62455.1|AF387010_1 (AF387010) Unknown protein [Arabidopsis thaliana]
gb|AAL66925.1| (AY072510) unknown protein [Arabidopsis thaliana]
Length = 221
Score = 68.9 bits (167), Expect = 4e-11
Identities = 51/206 (24%), Positives = 93/206 (44%), Gaps = 24/206 (11%)
Query: 43 WCANHKLECLTLYAFSTENWKRPKSEVDFLMKMLKKYLK---DERSTYLNNNIRFRAIGD 99
+C ++ +T+YAFS +N++R EV+ +M ++ + +K ++ S IR IG+
Sbjct: 4 YCYELGIKYVTIYAFSIDNFRRKPEEVESVMDLMLEKIKSLLEKESIVHQYGIRVYFIGN 63
Query: 100 LEGFSKELRDTILQLENDTRHFKDFTQVLALNYGSKNELSRAFKSLLESPPSHINLLE-- 157
L + ++R ++ T ++ + Y S +E+ +A K + +I
Sbjct: 64 LALLNDQVRAAAEKVMKATAKNSRVVLLICIAYNSTDEIVQAVKKSCINKSDNIEASNYK 123
Query: 158 -----------SLENE--------ISNRLDTHDLPEVDLLLRTGGEMRLSNFLLWQSSYA 198
+EN+ I + P D+L+R+ GE RLSNFLLWQ+
Sbjct: 124 HEDSDSDIEGTDMENQEKKIQLVDIEENMQMSVAPNPDILIRSSGETRLSNFLLWQTGNT 183
Query: 199 ELFFTPILWPDFTPKDLENIISDFYK 224
+L LWP+ + L I +F +
Sbjct: 184 QLCSPAALWPEIGLRHLLWAILNFQR 209
>dbj|BAB91251.1| (AB061236) cis-prenyltransferase [Hevea brasiliensis]
Length = 207
Score = 63.2 bits (152), Expect = 2e-09
Identities = 44/158 (27%), Positives = 76/158 (47%), Gaps = 6/158 (3%)
Query: 9 AIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSE 68
A IMDGN R+AK A G+K G L +C + +T+YAFS +N++R E
Sbjct: 1 AFIMDGNRRFAKKHKMKEAEGYKAGYLALLRTLTYCYELGVRYVTIYAFSIDNFRRQPRE 60
Query: 69 VDFLMKMLKKYLKD---ERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
V +M ++ + +++ E S ++ R +G+L + +R ++ T + F
Sbjct: 61 VQCVMNLMMEKIEEIIVEESIMNAYDVGVRIVGNLNLLDEPIRIAAEKIMRATANNSRFV 120
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLENEI 163
++A+ Y S +E+ A + ES +N E N I
Sbjct: 121 LLIAVAYSSTDEIVHAVE---ESSKDKLNSNEVCNNGI 155
>ref|NP_280523.1| (NC_002607) Vng1781c [Halobacterium sp. NRC-1]
gb|AAG20003.1| (AE005081) Vng1781c [Halobacterium sp. NRC-1]
Length = 326
Score = 63.2 bits (152), Expect = 2e-09
Identities = 32/103 (31%), Positives = 63/103 (61%), Gaps = 2/103 (1%)
Query: 128 LALNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEMRL 187
+++ +G K+E + A +S+ ++ + ++++ ++ + E DL+++TG E RL
Sbjct: 225 VSVGHGGKHEFATAVRSVADAVAAGDLDPDAIDEDVIES-ELVFPAEPDLVIKTGAE-RL 282
Query: 188 SNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
S+F++WQS Y+EL+FT + W DF +D + D+ R R+FG
Sbjct: 283 SDFMIWQSVYSELYFTDVNWRDFRKRDYLRAVLDYQNRQRRFG 325
>dbj|BAB91250.1| (AB061235) cis-prenyltransferase [Hevea brasiliensis]
Length = 198
Score = 57.8 bits (138), Expect = 1e-07
Identities = 52/198 (26%), Positives = 92/198 (46%), Gaps = 22/198 (11%)
Query: 9 AIIMDGNGRWAKLKNKARAYGHKKGVKTLKDITIWCANHKLECLTLYAFSTENWKRPKSE 68
A IMDGN R+AK N A A G++ + + +C ++ T+YAF +N+K E
Sbjct: 1 AFIMDGNRRYAKKWNIAEATGYRAVFLAVMCMLKYCYELGVKYTTIYAFGYDNFKIRPEE 60
Query: 69 VDFLMK-MLKKY--LKDERSTYLNNNIRFRAIGDLEGFSKELRDTILQLENDTRHFKDFT 125
V +LM ML+K L + S +R +GDL+ ++ +R + T + + T
Sbjct: 61 VQYLMDLMLEKIEGLIKQESIVNEYGVRVHFVGDLKLLNERVRVAAEKAMQATVNSTNST 120
Query: 126 QVLALNYGSKNELSRAFKSLLESPPSHINLLESLE----------NEISNRLDTHDL--- 172
++ + Y S +E+ A +S + I L++ + E+ + + D+
Sbjct: 121 LLICVAYTSTDEILHAVQSSCLEKWNEIQELDANQAQNGEITEEKQELKHIIKLVDIERH 180
Query: 173 ------PEVDLLLRTGGE 184
P+ D+L+RT GE
Sbjct: 181 TYMGLAPDPDVLIRTSGE 198
>pir||JQ0426 hypothetical 14.2K protein - Streptomyces fradiae transposon Tn4556
gb|AAA88567.1| (M29297) unknown protein [Streptomyces fradiae]
Length = 125
Score = 57.4 bits (137), Expect = 1e-07
Identities = 27/75 (36%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 6 KHLAIIMDGNGRWAKLKNKAR-AYGHKKGVKTLKDITIWCANHKLECLTLYAFSTEN-WK 63
KH+ +IMDGN RWA+ A + GH+ G + ++ + WC ++ +T++ STEN +
Sbjct: 26 KHIGLIMDGNRRWARQMGMANPSIGHRYGAEHVESVLSWCETAGIKHVTVFVCSTENLQR 85
Query: 64 RPKSEVDFLMKMLKK 78
R +EV FLM+++++
Sbjct: 86 RGDTEVSFLMQVIEQ 100
>ref|NP_632038.1| (NC_003901) Undecaprenyl pyrophosphate synthetase [Methanosarcina
mazei Goe1]
gb|AAM29710.1| (AE013220) Undecaprenyl pyrophosphate synthetase [Methanosarcina
mazei Goe1]
Length = 123
Score = 50.4 bits (119), Expect = 2e-05
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Query: 130 LNYGSKNELSRAFKSLLESPPSHINLLESLENEISNRLDTHDLPEVDLLLRTGGEMRLSN 189
+NYG +L+ A+ ++ P ++E++ + ++P VDLL+R GG RLS
Sbjct: 34 INYGWYWDLTYAY----DNSPDGKKMIENIASA--------EIPRVDLLIRWGGRCRLSG 81
Query: 190 FLLWQSSYAELFFTPILWPDFTPKDLENIISDFYK 224
L Q+ Y++++ +WPDF P+ L + +FY+
Sbjct: 82 MLPVQTVYSDIYVVDEMWPDFKPEHLFKAL-EFYQ 115
>ref|NP_069541.1| (NC_000917) conserved hypothetical protein [Archaeoglobus fulgidus]
pir||C69338 conserved hypothetical protein AF0707 - Archaeoglobus fulgidus
gb|AAB90534.1| (AE001056) conserved hypothetical protein [Archaeoglobus fulgidus]
Length = 207
Score = 44.7 bits (104), Expect = 9e-04
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 176 DLLLRTGGEMRLSNFLLWQSSYAELFFTPILWPDFTPKDLENIISDFYKRVRKFG 230
D++++ G + + +FL+WQ YAEL+F I W + D I+ ++ +R R++G
Sbjct: 154 DMIIKAGND--IPDFLIWQGIYAELYFADIDWQNLRYADFLRILREYQRRERRYG 206
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.320 0.137 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 154,000,884
Number of Sequences: 1026957
Number of extensions: 6204563
Number of successful extensions: 18021
Number of sequences better than 1.0e-02: 148
Number of HSP's better than 0.0 without gapping: 146
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 17698
Number of HSP's gapped (non-prelim): 150
length of query: 234
length of database: 324,149,939
effective HSP length: 117
effective length of query: 117
effective length of database: 203,995,970
effective search space: 23867528490
effective search space used: 23867528490
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 95 (41.2 bits)