BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644760|ref|NP_206930.1| hypothetical protein
[Helicobacter pylori 26695]
(286 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_206930.1| (NC_000915) hypothetical protein [Helicoba... 558 e-158
ref|NP_222840.1| (NC_000921) putative [Helicobacter pylori ... 525 e-148
dbj|BAB24307.1| (AK005900) data source:SPTR, source key:O95... 55 1e-06
dbj|BAB25553.1| (AK008242) data source:SPTR, source key:O95... 55 1e-06
ref|NP_080130.1| (NM_025854) RIKEN cDNA 1700023B02 [Mus mus... 54 2e-06
ref|XP_130335.1| (XM_130335) RIKEN cDNA 1700023B02 [Mus mus... 53 4e-06
ref|XP_124517.1| (XM_124517) similar to data source:SPTR, s... 52 7e-06
ref|NP_609877.1| (NM_136033) CG12750 gene product [Drosophi... 48 1e-04
sp|P22620|ABRA_PLAFC 101 KD MALARIA ANTIGEN (P101) (ACIDIC ... 47 2e-04
ref|NP_651291.1| (NM_143034) BcDNA:GH01073 gene product [Dr... 47 2e-04
ref|NP_500767.1| (NM_068366) F36H12.3.p [Caenorhabditis ele... 47 3e-04
gb|AAF46433.1| (AE003446) CG15365 gene product [Drosophila ... 47 3e-04
gb|AAF56669.1| (AE003759) CG6066 gene product [Drosophila m... 46 4e-04
ref|NP_495100.1| (NM_062699) F59E12.9.p [Caenorhabditis ele... 46 5e-04
sp|Q08695|MST1_DROHY Axoneme-associated protein MST101(1) >... 45 7e-04
ref|NP_189519.1| (NM_113798) hypothetical protein [Arabidop... 45 7e-04
ref|XP_141026.1| (XM_141026) similar to hypothetical protei... 45 0.001
ref|NP_593531.1| (NC_003424) gar2 protein [Schizosaccharomy... 45 0.001
pir||S55785 nucleolar protein gar2 - fission yeast (Schizos... 45 0.001
ref|NP_064623.1| (NM_020238) inner centromere protein antig... 45 0.001
emb|CAA97180.1| (Z72946) ORF YGR159c [Saccharomyces cerevis... 45 0.001
ref|NP_011675.1| (NC_001139) nuclear localization sequence ... 45 0.001
gb|AAH01555.1|AAH01555 (BC001555) Unknown (protein for MGC:... 45 0.001
gb|AAM13845.1| (AY091023) unknown protein [Arabidopsis thal... 45 0.001
ref|NP_004783.1| (NM_004792) peptidyl-prolyl isomerase G (c... 45 0.001
ref|NP_594602.1| (NC_003424) putative eukaryotic translatio... 44 0.002
ref|NP_586080.1| (NC_003234) similarity to ribosomal protei... 44 0.002
ref|NP_497967.1| (NM_065566) neurofilament triplet M protei... 44 0.003
sp|Q08696|MST2_DROHY Axoneme-associated protein MST101(2) >... 43 0.003
gb|AAM50761.1| (AY118901) LD10524p [Drosophila melanogaster] 43 0.003
ref|NP_633349.1| (NC_003901) Chemotaxis protein [Methanosar... 43 0.003
ref|NP_177807.1| (NM_106331) putative translation initiatio... 43 0.003
emb|CAA82046.1| (Z28201) ORF YKL201c [Saccharomyces cerevis... 43 0.003
gb|AAC60282.1| (AF004397) chromo-helicase-DNA-binding on th... 43 0.003
pir||S51364 sperm tail-specific protein mst101(2) - fruit f... 43 0.003
gb|AAF57445.1| (AE003791) CG11180-PA [Drosophila melanogaster] 43 0.003
ref|NP_012721.1| (NC_001143) involved in mannose metabolism... 43 0.003
pir||S38038 hypothetical protein YKL201c - yeast (Saccharom... 43 0.003
gb|AAA98076.1| (L41834) nuclear protein [Ensis minor] 43 0.005
gb|AAL10509.1| (AY042084) maebl [Plasmodium falciparum] 43 0.005
gb|AAL96708.1| (AC116330) hypothetical protein [Dictyosteli... 43 0.005
gb|AAM43671.1| (AC117177) hypothetical protein [Dictyosteli... 43 0.005
gb|AAF49848.1| (AE003539) CG11274 gene product [Drosophila ... 43 0.005
gb|AAC67538.1| (AF081799) developmental protein DG1071 [Dic... 43 0.005
ref|XP_130275.1| (XM_130275) similar to matrin cyclophilin ... 42 0.006
dbj|BAA97098.1| (AP002460) gene_id:F1D9.26~unknown protein ... 42 0.006
ref|NP_013276.1| (NC_001144) major low affinity 55 kDa Cent... 42 0.006
sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog... 42 0.008
gb|AAM43735.1| (AC116987) hypothetical protein [Dictyosteli... 42 0.008
ref|NP_491423.1| (NM_059022) helicase [Caenorhabditis elega... 42 0.008
ref|NP_504585.1| (NM_072184) Y38B5A.1.p [Caenorhabditis ele... 42 0.008
gb|AAF51438.1| (AE003588) CG4124 gene product [alt 1] [Dros... 42 0.008
ref|NP_498673.1| (NM_066272) ZK783.4.p [Caenorhabditis eleg... 42 0.008
pir||T49717 related to BCS1 protein precursor [imported] - ... 42 0.008
gb|AAF40306.1|AF156667_1 (AF156667) RNA helicase [Vigna rad... 42 0.008
ref|NP_608554.1| (NM_134710) CG4124 gene product [Drosophil... 42 0.008
gb|AAC34964.1| (AF023853) ElpB2 [Borrelia burgdorferi] >gi|... 42 0.008
>ref|NP_206930.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||B64536 hypothetical protein HP0130 - Helicobacter pylori (strain 26695)
gb|AAD07199.1| (AE000534) H. pylori predicted coding region HP0130 [Helicobacter
pylori 26695]
Length = 286
Score = 558 bits (1439), Expect = e-158
Identities = 286/286 (100%), Positives = 286/286 (100%)
Query: 1 MKRILFFLVATTFLLRAETDSATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVNLEKER 60
MKRILFFLVATTFLLRAETDSATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVNLEKER
Sbjct: 1 MKRILFFLVATTFLLRAETDSATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVNLEKER 60
Query: 61 VKNFNRYSETKMSKGDLSAFGAFFKGSLESCVDQKICYYEHKDGKVSFVVNDREKFYKHV 120
VKNFNRYSETKMSKGDLSAFGAFFKGSLESCVDQKICYYEHKDGKVSFVVNDREKFYKHV
Sbjct: 61 VKNFNRYSETKMSKGDLSAFGAFFKGSLESCVDQKICYYEHKDGKVSFVVNDREKFYKHV 120
Query: 121 LKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKVDAIVL 180
LKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKVDAIVL
Sbjct: 121 LKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKVDAIVL 180
Query: 181 KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETA 240
KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETA
Sbjct: 181 KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETA 240
Query: 241 SKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
SKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK
Sbjct: 241 SKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
>ref|NP_222840.1| (NC_000921) putative [Helicobacter pylori J99]
pir||A71971 hypothetical protein jhp0119 - Helicobacter pylori (strain J99)
gb|AAD05708.1| (AE001451) putative [Helicobacter pylori J99]
Length = 285
Score = 525 bits (1353), Expect = e-148
Identities = 269/286 (94%), Positives = 277/286 (96%), Gaps = 1/286 (0%)
Query: 1 MKRILFFLVATTFLLRAETDSATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVNLEKER 60
MKRILFFL ATTFLLRAET SATINTTVDPNVMFSESSTGNVKKDRKRVLKSMV+LEKER
Sbjct: 1 MKRILFFLAATTFLLRAETASATINTTVDPNVMFSESSTGNVKKDRKRVLKSMVDLEKER 60
Query: 61 VKNFNRYSETKMSKGDLSAFGAFFKGSLESCVDQKICYYEHKDGKVSFVVNDREKFYKHV 120
VKNFN+YSETKMSKGDLSAFGAFFKGSLE CV+QKICYYEH++GKVSFVVNDREKFYKHV
Sbjct: 61 VKNFNQYSETKMSKGDLSAFGAFFKGSLEDCVEQKICYYEHRNGKVSFVVNDREKFYKHV 120
Query: 121 LKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKVDAIVL 180
LKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVR+SQKEKARKVDAIVL
Sbjct: 121 LKDLGTELSLPLFNWLYKGSDFGALHEQFGDMYDGYIKYLISMVRVSQKEKARKVDAIVL 180
Query: 181 KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETA 240
KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSK TQN+SN DL+ MTNAN LKETA
Sbjct: 181 KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSK-TQNSSNPDLDPMTNANTLKETA 239
Query: 241 SKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
SKEPE SSKKEKK KKKRRLSKKEKQQQALQQEFEKQISDSSKSEK
Sbjct: 240 SKEPETSSKKEKKPKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 285
>dbj|BAB24307.1| (AK005900) data source:SPTR, source key:O95367,
evidence:ISS~homolog to CBF1 INTERACTING COREPRESSOR
CIR~putative [Mus musculus]
Length = 286
Score = 54.7 bits (130), Expect = 1e-06
Identities = 33/143 (23%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 154 DGYIKYLISMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFI 213
D +++L S+ +++ RK+D + KK +++++K K QK + + SP
Sbjct: 43 DPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKKSDKKKKK-LQKSKNKHKKRKNKSPSSS 101
Query: 214 SSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLS----------KK 263
SSS + ++S+S +S ++++ +++S+ K+EK+ +KK++ + K+
Sbjct: 102 SSSSSSSSSSSSSSSSSSSSSETSDSSSESDNKEKKREKEKRKKKKKTKCSESKSSDCKE 161
Query: 264 EKQQQALQQEFEKQISDSSKSEK 286
+K + L +E SD K+++
Sbjct: 162 DKPKNMLYEELSSSHSDRGKAQE 184
>dbj|BAB25553.1| (AK008242) data source:SPTR, source key:O95367,
evidence:ISS~homolog to CBF1 INTERACTING COREPRESSOR
CIR~putative [Mus musculus]
Length = 277
Score = 54.7 bits (130), Expect = 1e-06
Identities = 33/143 (23%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 154 DGYIKYLISMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFI 213
D +++L S+ +++ RK+D + KK +++++K K QK + + SP
Sbjct: 34 DPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKKSDKKKKEV-QKSKNKHKKRKNKSPSSS 92
Query: 214 SSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLS----------KK 263
SSS + ++S+S +S ++++ +++S+ K+EK+ +KK++ + K+
Sbjct: 93 SSSSSSSSSSSSSSSSSSSSSETSDSSSESDNKEKKREKEKRKKKKKTKCSESKSSDCKE 152
Query: 264 EKQQQALQQEFEKQISDSSKSEK 286
+K + L +E SD K+++
Sbjct: 153 DKPKNMLYEELSSSHSDRGKAQE 175
>ref|NP_080130.1| (NM_025854) RIKEN cDNA 1700023B02 [Mus musculus]
dbj|BAB24488.1| (AK006260) data source:SPTR, source key:O95367,
evidence:ISS~homolog to CBF1 INTERACTING COREPRESSOR
CIR~putative [Mus musculus]
Length = 450
Score = 54.3 bits (129), Expect = 2e-06
Identities = 33/143 (23%), Positives = 75/143 (52%), Gaps = 11/143 (7%)
Query: 154 DGYIKYLISMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFI 213
D +++L S+ +++ RK+D + KK +++++K K QK + + SP
Sbjct: 207 DPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKKSDKKKKK-LQKSKNKHKKRKNKSPSSS 265
Query: 214 SSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLS----------KK 263
SSS + ++S+S +S ++++ +++S+ K+EK+ +KK++ + K+
Sbjct: 266 SSSSSSSSSSSSTSSSSSSSSETSDSSSESDNKEKKREKEKRKKKKKTKCSESKSSDCKE 325
Query: 264 EKQQQALQQEFEKQISDSSKSEK 286
+K + L +E SD K+++
Sbjct: 326 DKPKNMLYEELSSSHSDRGKAQE 348
>ref|XP_130335.1| (XM_130335) RIKEN cDNA 1700023B02 [Mus musculus]
Length = 451
Score = 52.8 bits (125), Expect = 4e-06
Identities = 33/143 (23%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 154 DGYIKYLISMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFI 213
D +++L S+ +++ RK+D + KK +++++K K QK + + SP
Sbjct: 207 DPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKKSDKKKKK-LQKSKNKHKKRKNKSPSSS 265
Query: 214 SSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLS----------KK 263
SSS + ++S+S +S +++ +++S+ K+EK+ +KK++ + K+
Sbjct: 266 SSSSSSSSSSSSSSSSSSSSWETSDSSSESDNKEKKREKEKRKKKKKTKCSESKSSDCKE 325
Query: 264 EKQQQALQQEFEKQISDSSKSEK 286
+K + L +E SD K+++
Sbjct: 326 DKPKNMLYEELSSSHSDRGKAQE 348
>ref|XP_124517.1| (XM_124517) similar to data source:SPTR, source key:O95367,
evidence:ISS~homolog to CBF1 INTERACTING COREPRESSOR
CIR~putative [Mus musculus]
Length = 281
Score = 52.0 bits (123), Expect = 7e-06
Identities = 37/139 (26%), Positives = 72/139 (51%), Gaps = 8/139 (5%)
Query: 154 DGYIKYLISMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFI 213
D +++L S+ +++ RK+D + KK +++++K K QK + + SP
Sbjct: 43 DPEVEFLKSLTTKQKQKLLRKLDRLEKKKKKKKSDK-KKKKLQKSKNKHKKRKNKSPSSS 101
Query: 214 SSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKK------KRRLSKKEKQQ 267
SSS + ++S+S +S T +++ E+ +KE + +K KK KK K K++K +
Sbjct: 102 SSSSSSSSSSSSSSSSET-SDSSSESDNKEKKREKEKRKKKKKTKCSESKSSDCKEDKPK 160
Query: 268 QALQQEFEKQISDSSKSEK 286
L +E SD K+++
Sbjct: 161 NMLYEELSSSHSDRGKAQE 179
>ref|NP_609877.1| (NM_136033) CG12750 gene product [Drosophila melanogaster]
gb|AAL29144.1| (AY061596) SD04745p [Drosophila melanogaster]
Length = 751
Score = 48.1 bits (113), Expect = 1e-04
Identities = 29/97 (29%), Positives = 46/97 (46%)
Query: 190 DTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPEASSK 249
+TK A SS S TDS + + ++S S + ++ K + + SK
Sbjct: 344 NTKVAPSSSSSSSSSSDTDSEDSSEEDSSSDSSSESSSSDSSSEPKKKRKRKDKDKKKSK 403
Query: 250 KEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
K K K K+ +KK+K++ +QE EK+ SK EK
Sbjct: 404 KATKEKSKKTKNKKKKKKAEKEQEKEKEKQRKSKKEK 440
Score = 42.4 bits (98), Expect = 0.006
Identities = 25/103 (24%), Positives = 50/103 (48%), Gaps = 3/103 (2%)
Query: 187 AEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPEA 246
++ D++ + ++ SS + S + S + S K+ + + D A K +K +
Sbjct: 359 SDTDSEDSSEEDSSSDSSSESSSSDSSSEPKKKRKRKDKDKKKSKKATKEKSKKTKNKKK 418
Query: 247 SSKKEK---KSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
K EK K K+K+R SKKEK++ +++ EK+ + +
Sbjct: 419 KKKAEKEQEKEKEKQRKSKKEKEKDKKRKKEEKKAAKKKSKRR 461
>sp|P22620|ABRA_PLAFC 101 KD MALARIA ANTIGEN (P101) (ACIDIC BASIC REPEAT ANTIGEN)
pir||A29232 101K malaria antigen precursor - malaria parasite (Plasmodium
falciparum) (strain Camp)
gb|AAA29462.1| (J03902) p101/acidic basic repeat antigen [Plasmodium falciparum]
Length = 743
Score = 47.0 bits (110), Expect = 2e-04
Identities = 39/164 (23%), Positives = 74/164 (44%), Gaps = 19/164 (11%)
Query: 138 KGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKVDAI----VLKKMEEQA------ 187
K G ++F + +G + I ++ + K+K + ++AI + K E QA
Sbjct: 562 KVKKIGVTLKKFEPLKNGNVSETIKLIHLGNKDK-KHIEAINNDIQIIKQELQAIYNELM 620
Query: 188 -----EKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASK 242
K+ + FQ+ LE+ + E ++ A + + +A A K +
Sbjct: 621 NYTNGNKNIQQIFQQNI---LENDVLNQETEEEMEKQVEAITKQIEAEVDALAPKNKEEE 677
Query: 243 EPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
E E +KEK+ K+K K+EK+++ ++E EK+ + K EK
Sbjct: 678 EKEKEKEKEKEEKEKEEKEKEEKEKEKEEKEKEKEEKEEEKKEK 721
>ref|NP_651291.1| (NM_143034) BcDNA:GH01073 gene product [Drosophila melanogaster]
gb|AAD34736.1| (AF132148) unknown [Drosophila melanogaster]
gb|AAF56342.1| (AE003749) BcDNA:GH01073 gene product [Drosophila melanogaster]
Length = 653
Score = 47.0 bits (110), Expect = 2e-04
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 170 EKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNS 229
EK RK+ ++K ++QA+K +AA S E S ++S +SS ++++S+S +S
Sbjct: 567 EKKRKLS---VEKSKKQAKKSKRAASSSSDSSESSSESESDS--TSSDSSEDSSSSSSSS 621
Query: 230 MTNANALKETASKEPEASSKKEKKSKKK 257
+ K T SK+ ++ SK KSKKK
Sbjct: 622 DDRSKRKKSTKSKQKKSKSKSSHKSKKK 649
>ref|NP_500767.1| (NM_068366) F36H12.3.p [Caenorhabditis elegans]
pir||T33457 hypothetical protein F36H12.3 - Caenorhabditis elegans
gb|AAC26930.1| (AF078790) Hypothetical protein F36H12.3 [Caenorhabditis elegans]
Length = 335
Score = 46.6 bits (109), Expect = 3e-04
Identities = 27/110 (24%), Positives = 52/110 (46%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
+KE+ ++ D KK E++ EK+ + + E E D E K++ N + D
Sbjct: 104 KKEEKKEDDKKDEKKDEKKDEKEEDKKSEDKKEDEKEKDDDKKEDKKDDKKSDNKDDKDD 163
Query: 228 NSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQ 277
KE +E + K+EKK +KK ++EK+++ +++ E +
Sbjct: 164 EKKEEKKDDKEEKKEEKKEEKKEEKKEEKKEEKKEEEKKEEKKEEKKEDE 213
>gb|AAF46433.1| (AE003446) CG15365 gene product [Drosophila melanogaster]
Length = 821
Score = 46.6 bits (109), Expect = 3e-04
Identities = 44/227 (19%), Positives = 101/227 (44%), Gaps = 20/227 (8%)
Query: 68 SETKMSKGDLSAFGAFFKGSLESCVDQKICYYEHKDGKVSFVVNDREKFYKHVLKDLGTE 127
SE + + D + ++ + ++E K Y+EH+ ++ +++ + L+ +
Sbjct: 384 SELEAALKDRDSELSYLRQAMEHNEKDKEVYWEHETQRLRLFYEGQQRECQLKLRKMEQL 443
Query: 128 LSLPLFNW----LYKGSDFGALHEQFGDMYDGYIKYLISMVRISQKEKARKVDAIVLKKM 183
L L F L + L +Q + + R S + ++VDA+ +
Sbjct: 444 LGLQQFQLKQHKLRQSEQVNRLQQQ------------LDLARDSSQGLQQQVDALRHQLE 491
Query: 184 EEQ---AEKDTKAAFQKRSSGELESHTDSPEF-ISSSKRTQNASNSDLNSMTNANALKET 239
+ + E++ + A K E + + I S K + N S+S NS +N + T
Sbjct: 492 DSEWRVCERNGEIALLKTQLKEAHLEINMKDHAIVSLKHSSNRSSSSSNSNSNKSCDTNT 551
Query: 240 ASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
+ +P+ +K+E++ ++ L ++++QQQ QQ+ ++Q + ++
Sbjct: 552 SQSQPKQQAKEEQQQQQHPELQQQQQQQQQQQQQQQQQQQQQQQQQQ 598
>gb|AAF56669.1| (AE003759) CG6066 gene product [Drosophila melanogaster]
Length = 463
Score = 46.2 bits (108), Expect = 4e-04
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 5/111 (4%)
Query: 181 KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANA----- 235
KK E++++K +K + +K+S E S + S SS + ++S+S + + +
Sbjct: 220 KKSEKKSKKKSKKSKKKKSKQESSSSSSSSSSEDSSDESSSSSSSSSSDSEDESEEEDVW 279
Query: 236 LKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
L++TA + KK SKK ++ KK+K++++ ++ +K S S+ K
Sbjct: 280 LEKTADGIKKPKKKKSSTSKKDKKSKKKKKKRKSEAEKSKKSSSSSASKSK 330
>ref|NP_495100.1| (NM_062699) F59E12.9.p [Caenorhabditis elegans]
pir||T15264 hypothetical protein F59E12.9 - Caenorhabditis elegans
gb|AAB54259.1| (AF003386) Hypothetical protein F59E12.9 [Caenorhabditis elegans]
Length = 1621
Score = 45.8 bits (107), Expect = 5e-04
Identities = 33/122 (27%), Positives = 61/122 (49%), Gaps = 21/122 (17%)
Query: 181 KKMEEQAEKDTKAAFQKRSSGELE----------SHTDSPEFISSSKRT------QNASN 224
+K E+ E K+ ++R S + E S +DS +F SSSKR +N S+
Sbjct: 52 EKQEDDVEVTPKSKEKRRKSEKKEKPPILNYLDDSDSDSADFSSSSKRKRSKRALENDSD 111
Query: 225 SDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKS 284
D+ +K+ KE E E+++K++R+ +KKEKQ+Q +E ++ +++
Sbjct: 112 EDVGDDGKEEEMKKKKEKEEE-----ERRAKEERKKAKKEKQRQKELEERNRKAEEAASK 166
Query: 285 EK 286
+
Sbjct: 167 RR 168
>sp|Q08695|MST1_DROHY Axoneme-associated protein MST101(1)
pir||S34153 mst101-1 protein - fruit fly (Drosophila hydei)
emb|CAA51875.1| (X73480) mst101(1) [Drosophila hydei]
Length = 344
Score = 45.4 bits (106), Expect = 7e-04
Identities = 36/129 (27%), Positives = 68/129 (51%), Gaps = 16/129 (12%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
+KE A K KK E A+K+ +AA +K+ + + ++ E ++ Q ++L
Sbjct: 132 EKEAAEK------KKCAEAAKKEKEAAEKKKCAEAAKKEKEAAEKKKCAEAAQKKKCAEL 185
Query: 228 NSMTNANALK----ETASKEPEASSKK--EKKSKKKRRLSKKEKQQQALQQEFE----KQ 277
A K E A KE EA+ KK E+++KK++ ++K+K ++ ++E E K+
Sbjct: 186 AKKEQEAAEKKKCAEAAKKEKEAAEKKKCEERAKKEKEAAEKKKCEERAKKEKEAAEKKK 245
Query: 278 ISDSSKSEK 286
++++K EK
Sbjct: 246 CAEAAKKEK 254
>ref|NP_189519.1| (NM_113798) hypothetical protein [Arabidopsis thaliana]
dbj|BAB03174.1| (AP002057) gene_id:T19N8.6~unknown protein [Arabidopsis thaliana]
Length = 2081
Score = 45.4 bits (106), Expect = 7e-04
Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 165 RISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASN 224
R S+KEK D KK EE EK + + + + H D+ + + +
Sbjct: 1046 RKSKKEKEESRDLKAKKKEEETKEKKESENHKSKKKEDKKEHEDNKSMKKEEDKKEKKKH 1105
Query: 225 SDLNSMTNANALKETASKEPEASSKK-----EKKSKKKRRLSKKE---KQQQALQQEFEK 276
+ S K+ E + S+KK EKK + +L KKE K+++ +++ E
Sbjct: 1106 EESKSRKKEEDKKDMEKLEDQNSNKKKEDKNEKKKSQHVKLVKKESDKKEKKENEEKSET 1165
Query: 277 QISDSSKSEK 286
+ +SSKS+K
Sbjct: 1166 KEIESSKSQK 1175
Score = 45.1 bits (105), Expect = 0.001
Identities = 30/110 (27%), Positives = 54/110 (48%), Gaps = 3/110 (2%)
Query: 180 LKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKE- 238
LKK E+ ++ TK+ K ++ S+SK + + S T A KE
Sbjct: 971 LKKQEDNKKETTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEK 1030
Query: 239 --TASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
+ K+ E +E+KSKK++ S+ K ++ ++ EK+ S++ KS+K
Sbjct: 1031 KKSQDKKREEKDSEERKSKKEKEESRDLKAKKKEEETKEKKESENHKSKK 1080
Score = 42.0 bits (97), Expect = 0.008
Identities = 34/132 (25%), Positives = 58/132 (43%), Gaps = 13/132 (9%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKD-TKAAFQKRSSGELESHTDSPEFIS--------SSKR 218
+KE ++ + + +Q KD K + ++S + D E+++ + K
Sbjct: 921 KKEGNKEENKDTINTSSKQKGKDKKKKKKESKNSNMKKKEEDKKEYVNNELKKQEDNKKE 980
Query: 219 TQNASNSDLNSMTNANALK----ETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEF 274
T + NS L N K ++ASK E +EKKSK K K++K+ Q ++E
Sbjct: 981 TTKSENSKLKEENKDNKEKKESEDSASKNREKKEYEEKKSKTKEEAKKEKKKSQDKKREE 1040
Query: 275 EKQISDSSKSEK 286
+ SK EK
Sbjct: 1041 KDSEERKSKKEK 1052
>ref|XP_141026.1| (XM_141026) similar to hypothetical protein, MGC:7531; clone
MGC:7531 [Mus musculus]
Length = 524
Score = 45.1 bits (105), Expect = 0.001
Identities = 48/206 (23%), Positives = 94/206 (45%), Gaps = 20/206 (9%)
Query: 87 SLESCVDQKICYYEHKDGKVSFVVNDREKFYKHVLKDLGTELSLPLFNWLYKGSDFGALH 146
S+ES +D + C HK K+ F + ++ +L + + F FG L
Sbjct: 281 SVESSLDFEEC--AHKLLKMEFAESQTKELCNMILDCCAQQRTYENF--------FGLLA 330
Query: 147 EQFGDMYDGYIKYLISMVRISQ--KEKARKVDAIVLKKMEEQAEKDTK--AAFQKRSSGE 202
+F + Y++ S+ ++ +E + +++ + E +K T ++ + SS
Sbjct: 331 GRFCMLEKEYMESFESLGGLTDELREHLKNTPKVIVAQKPEAEQKKTALTSSSSESSSAS 390
Query: 203 LESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRR--L 260
S +DS SSS+ + AS+S +S T ++ T++KE + + ++ ++RR
Sbjct: 391 DSSDSDSDSSESSSESSSEASDSSSSSSTQSS----TSAKESQKTGMANQRRSRERRDSF 446
Query: 261 SKKEKQQQALQQEFEKQISDSSKSEK 286
S+ EKQ+ Q + D SKS +
Sbjct: 447 SENEKQRSRNQDSDNVRRKDRSKSRE 472
>ref|NP_593531.1| (NC_003424) gar2 protein [Schizosaccharomyces pombe]
sp|P41891|GAR2_SCHPO Protein gar2
pir||T37634 pre-ribopsomal particle assembly protein - fission yeast
(Schizosaccharomyces pombe)
emb|CAB86413.1| (AL163191) gar2 protein [Schizosaccharomyces pombe]
Length = 500
Score = 45.1 bits (105), Expect = 0.001
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 167 SQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSD 226
S+KE R KK ++ +K K ++ SS E ES + S E SSS ++++S+
Sbjct: 54 SKKEAKRASSPEPSKKSVKKQKKSKK---KEESSSESESESSSSESESSSSESESSSSES 110
Query: 227 LNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSE 285
+S + +++ + + KKE S+ +E+++ ++ E +K+ S S SE
Sbjct: 111 ESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSE 169
Score = 43.5 bits (101), Expect = 0.003
Identities = 31/113 (27%), Positives = 50/113 (43%), Gaps = 8/113 (7%)
Query: 172 ARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMT 231
A+K V K ++E A K K A +K S + + + E S +T D++
Sbjct: 2 AKKDKTSVKKSVKETASK--KGAIEKPSKSKKITKEAAKEIAKQSSKT------DVSPKK 53
Query: 232 NANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKS 284
+ K +S EP S K++K KK+ S E + ++ E E S+S S
Sbjct: 54 SKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESS 106
>pir||S55785 nucleolar protein gar2 - fission yeast (Schizosaccharomyces pombe)
emb|CAA88179.1| (Z48166) gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 45.1 bits (105), Expect = 0.001
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 3/119 (2%)
Query: 167 SQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSD 226
S+KE R KK ++ +K K ++ SS E ES + S E SSS ++++S+
Sbjct: 54 SKKEAKRASSPEPSKKSVKKQKKSKK---KEESSSESESESSSSESESSSSESESSSSES 110
Query: 227 LNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSE 285
+S + +++ + + KKE S+ +E+++ ++ E +K+ S S SE
Sbjct: 111 ESSSSESSSSESEEEVIVKTEEKKESSSESSSSSESEEEEEAVVKIEEKKESSSDSSSE 169
Score = 43.5 bits (101), Expect = 0.003
Identities = 31/113 (27%), Positives = 50/113 (43%), Gaps = 8/113 (7%)
Query: 172 ARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMT 231
A+K V K ++E A K K A +K S + + + E S +T D++
Sbjct: 2 AKKDKTSVKKSVKETASK--KGAIEKPSKSKKITKEAAKEIAKQSSKT------DVSPKK 53
Query: 232 NANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKS 284
+ K +S EP S K++K KK+ S E + ++ E E S+S S
Sbjct: 54 SKKEAKRASSPEPSKKSVKKQKKSKKKEESSSESESESSSSESESSSSESESS 106
>ref|NP_064623.1| (NM_020238) inner centromere protein antigens (135kD, 155kD); inner
centromere protein INCENP [Homo sapiens]
gb|AAF87584.1|AF282265_1 (AF282265) inner centromere protein INCENP [Homo sapiens]
Length = 919
Score = 45.1 bits (105), Expect = 0.001
Identities = 25/121 (20%), Positives = 59/121 (48%), Gaps = 3/121 (2%)
Query: 166 ISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNS 225
+ Q+E+ R+ ++ KK EE+ E+ KAA KR + + E E +R Q
Sbjct: 647 LQQEEEERRHQELLQKKKEEEQERLRKAAEAKRLAEQREQERREQERREQERREQERREQ 706
Query: 226 DLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSE 285
+ ++ A +E +++++ + +R L ++EK + +++ ++++ + K E
Sbjct: 707 ERREQERREQERQLAEQE---RRREQERLQAERELQEREKALRLQKEQLQRELEEKKKKE 763
Query: 286 K 286
+
Sbjct: 764 E 764
>emb|CAA97180.1| (Z72946) ORF YGR159c [Saccharomyces cerevisiae]
Length = 188
Score = 45.1 bits (105), Expect = 0.001
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 164 VRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSK-RTQNA 222
V+ S++ K K A+ E + + + + S E ES + S S S+ + ++
Sbjct: 14 VKASKQAKEEKAKAVSSSSSESSSSSSSSS--ESESESESESESSSSSSSSDSESSSSSS 71
Query: 223 SNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSS 282
S+S+ + T K+++S ++SS +E++ +K+ +KKE+ +++ + S S
Sbjct: 72 SDSESEAETKKEESKDSSSSSSDSSSDEEEEEEKEE--TKKEESKESSSSDSSSSSSSDS 129
Query: 283 KSEK 286
+SEK
Sbjct: 130 ESEK 133
Score = 42.4 bits (98), Expect = 0.006
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 187 AEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSM----TNANALKETASK 242
+ D++++ S E E+ T E SS + ++S+ + T KE++S
Sbjct: 60 SSSDSESSSSSSSDSESEAETKKEESKDSSSSSSDSSSDEEEEEEKEETKKEESKESSSS 119
Query: 243 EPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
+ +SS + +S+K+ KK K + A ++E E+ + K+E+
Sbjct: 120 DSSSSSSSDSESEKEESNDKKRKSEDAEEEEDEESSNKKQKNEE 163
>ref|NP_011675.1| (NC_001139) nuclear localization sequence binding protein; Nsr1p
[Saccharomyces cerevisiae]
sp|P27476|NSR1_YEAST Nuclear localization sequence binding protein (P67)
pir||A39205 nuclear localization sequence-binding protein NSR1 - yeast
(Saccharomyces cerevisiae)
emb|CAA40472.1| (X57185) nuclear localization sequence binding protein
[Saccharomyces cerevisiae]
emb|CAA59817.1| (X85807) ORF G7001 [Saccharomyces cerevisiae]
emb|CAA97173.1| (Z72944) ORF YGR159c [Saccharomyces cerevisiae]
Length = 414
Score = 45.1 bits (105), Expect = 0.001
Identities = 30/124 (24%), Positives = 63/124 (50%), Gaps = 5/124 (4%)
Query: 164 VRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSK-RTQNA 222
V+ S++ K K A+ E + + + + S E ES + S S S+ + ++
Sbjct: 14 VKASKQAKEEKAKAVSSSSSESSSSSSSSS--ESESESESESESSSSSSSSDSESSSSSS 71
Query: 223 SNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSS 282
S+S+ + T K+++S ++SS +E++ +K+ +KKE+ +++ + S S
Sbjct: 72 SDSESEAETKKEESKDSSSSSSDSSSDEEEEEEKEE--TKKEESKESSSSDSSSSSSSDS 129
Query: 283 KSEK 286
+SEK
Sbjct: 130 ESEK 133
Score = 42.4 bits (98), Expect = 0.006
Identities = 25/104 (24%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 187 AEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSM----TNANALKETASK 242
+ D++++ S E E+ T E SS + ++S+ + T KE++S
Sbjct: 60 SSSDSESSSSSSSDSESEAETKKEESKDSSSSSSDSSSDEEEEEEKEETKKEESKESSSS 119
Query: 243 EPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
+ +SS + +S+K+ KK K + A ++E E+ + K+E+
Sbjct: 120 DSSSSSSSDSESEKEESNDKKRKSEDAEEEEDEESSNKKQKNEE 163
>gb|AAH01555.1|AAH01555 (BC001555) Unknown (protein for MGC:5054) [Homo sapiens]
Length = 357
Score = 44.7 bits (104), Expect = 0.001
Identities = 36/143 (25%), Positives = 63/143 (43%), Gaps = 6/143 (4%)
Query: 146 HEQFGDMYDGYIKYLISMVRISQKEKARK--VDAIVLKKMEEQAEKDTKAAFQKRSSGEL 203
H FG + G + ++ + + + A K + +L E + K +KR
Sbjct: 138 HVVFGQVISG--QEVVREIENQKTDAASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSS 195
Query: 204 ESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKK 263
S + S + SSS ++ +SD S T + K K+ +S+K KK KKKR+ SKK
Sbjct: 196 SSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKR--KKKHRKNSRKHKKEKKKRKKSKK 253
Query: 264 EKQQQALQQEFEKQISDSSKSEK 286
++ + E Q + + E+
Sbjct: 254 SASSESEAENLEAQPQSTVRPEE 276
>gb|AAM13845.1| (AY091023) unknown protein [Arabidopsis thaliana]
Length = 837
Score = 44.7 bits (104), Expect = 0.001
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 8/168 (4%)
Query: 104 GKVSFVVNDREKFYKHVLKDLGTELSLP----LFNWLYKGSDFGALHEQFGDMYDGYIKY 159
G +S + DR+KF H L +F L +G + E+ GD +G
Sbjct: 107 GLLSMSIADRDKFGSHFHITFRPNQQLDRNNVVFGKLIQGKEILKKIERVGDE-EGKPTV 165
Query: 160 LISMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRT 219
+ ++R + +K +++ + + ++ SS E ES +DS + S +
Sbjct: 166 SVKIIRCGEYSGDKKKSDGKKNGKHKKSLRVRRKKRRRHSSSESESSSDSE---TDSSES 222
Query: 220 QNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQ 267
+ S+SDL+S + ++ K+ + SSKK+K + K+R + EK++
Sbjct: 223 DSESDSDLSSPSFLSSSSHERQKKRKRSSKKDKHRRSKQRDKRHEKKR 270
>ref|NP_004783.1| (NM_004792) peptidyl-prolyl isomerase G (cyclophilin G);
Clk-associating RS-cyclophilin [Homo sapiens]
pir||JC5314 CDC28/cdc2-like kinase associating arginine-serine cyclophilin -
human
gb|AAB40347.1| (U40763) CARS-Cyp [Homo sapiens]
emb|CAA68053.1| (X99717) SRcyp protein [Homo sapiens]
Length = 754
Score = 44.7 bits (104), Expect = 0.001
Identities = 36/143 (25%), Positives = 63/143 (43%), Gaps = 6/143 (4%)
Query: 146 HEQFGDMYDGYIKYLISMVRISQKEKARK--VDAIVLKKMEEQAEKDTKAAFQKRSSGEL 203
H FG + G + ++ + + + A K + +L E + K +KR
Sbjct: 138 HVVFGQVISG--QEVVREIENQKTDAASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSS 195
Query: 204 ESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKK 263
S + S + SSS ++ +SD S T + K K+ +S+K KK KKKR+ SKK
Sbjct: 196 SSSSSSSDSDSSSDSQSSSDSSDSESATEEKSKKR--KKKHRKNSRKHKKEKKKRKKSKK 253
Query: 264 EKQQQALQQEFEKQISDSSKSEK 286
++ + E Q + + E+
Sbjct: 254 SASSESEAENLEAQPQSTVRPEE 276
>ref|NP_594602.1| (NC_003424) putative eukaryotic translation initiation factor eIF4G
[Schizosaccharomyces pombe]
sp|Q10475|YDF3_SCHPO Probable eukaryotic initiation factor C17C9.03
pir||T11583 probable translation initiation factor - fission yeast
(Schizosaccharomyces pombe)
emb|CAA97349.1| (Z73099) putative eukaryotic translation initiation factor eIF4G
[Schizosaccharomyces pombe]
Length = 1403
Score = 43.9 bits (102), Expect = 0.002
Identities = 29/128 (22%), Positives = 67/128 (51%), Gaps = 7/128 (5%)
Query: 165 RISQKEKARKVDAIVL---KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQN 221
+IS++E +++ DAI L ++++E+AE + K ++++ E E + + + +
Sbjct: 516 QISEEEASQRKDAIKLAIQQRIQEKAEAEAKRKAEEKARLEAEENAKREAEEQAKREAEE 575
Query: 222 ASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRL---SKKEKQQQALQQEFEKQI 278
+ + A +E A +E E ++K+E + K KR +K+E +++A ++ EK
Sbjct: 576 KAKREAEEKAKREA-EEKAKREAEENAKREAEEKAKREAEEKAKREAEEKAKREAEEKAK 634
Query: 279 SDSSKSEK 286
++ + K
Sbjct: 635 REAEEKAK 642
>ref|NP_586080.1| (NC_003234) similarity to ribosomal protein L5 [Encephalitozoon
cuniculi]
emb|CAD25684.1| (AL590447) similarity to ribosomal protein L5 [Encephalitozoon
cuniculi]
Length = 901
Score = 43.9 bits (102), Expect = 0.002
Identities = 28/106 (26%), Positives = 49/106 (45%), Gaps = 6/106 (5%)
Query: 187 AEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPEA 246
A + KA QK+S G + + S+K+ + + + NA +E A K +
Sbjct: 80 ATPEQKAPAQKQSEGSKNAQKKQQKEDQSAKKEEKQQKKNESKEANAQKKEEKAKKAEQQ 139
Query: 247 SSKKEKKS------KKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
+K KK+ K+K++ K EKQ+Q +++ EKQ + K
Sbjct: 140 KEEKTKKAEQQKVEKQKQKEEKAEKQKQQKEEKAEKQKQQKEEKAK 185
Score = 42.7 bits (99), Expect = 0.005
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 7/124 (5%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRT-----QNA 222
QK+K K + KK E+Q +K+ KA Q++ GE E + +K+T +
Sbjct: 224 QKQKEEKAEKQEQKKGEKQKQKEEKAEKQEQKKGEKEDTKKGEKAEKEAKKTSKDKEEPK 283
Query: 223 SNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQE-FEKQISDS 281
+ D S ++TAS + + + +KS++K+ + K +K E K+I
Sbjct: 284 TTVDKKSKDKIQGQEKTAS-DGDNNKATAEKSQEKKTMDKADKATSVKSPETVSKEIESK 342
Query: 282 SKSE 285
SK E
Sbjct: 343 SKEE 346
>ref|NP_497967.1| (NM_065566) neurofilament triplet M protein [Caenorhabditis
elegans]
pir||T24435 hypothetical protein T04A8.13 - Caenorhabditis elegans
emb|CAA84732.2| (Z35663) Glutamate/lysine rich second exon shows similarity to rat
neurofilament triplet M protein (blast score 184)~cDNA
EST yk279h10.3 comes from this gene [Caenorhabditis
elegans]
Length = 791
Score = 43.5 bits (101), Expect = 0.003
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 2/118 (1%)
Query: 169 KEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLN 228
KE+A K KK EE+ E + K+ + + + E K+ ++ +
Sbjct: 68 KEEAEKEKNEKEKKEEEKKEDGHEKKEDKKEDKKENENDEKKEKSKDDKKEESKEDKKEK 127
Query: 229 SMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
+ T N K K+ + KK++K KK++ KEK+++ ++E K+ D K +K
Sbjct: 128 TKTEDNEGKNEEKKKEKKEEKKDEKEKKEKTEDDKEKEKEKTKEEKVKE--DPKKDDK 183
>sp|Q08696|MST2_DROHY Axoneme-associated protein MST101(2)
emb|CAA51876.1| (X73481) mst101(2) [Drosophila hydei]
Length = 1391
Score = 43.1 bits (100), Expect = 0.003
Identities = 32/125 (25%), Positives = 69/125 (54%), Gaps = 12/125 (9%)
Query: 169 KEKARKV-DAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
+E+A+K+ +A K+ EE+A+K+ +AA +K+ + ++ E +R + +
Sbjct: 1065 EERAKKLKEAAEKKQCEERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEERAKKEKEA-- 1122
Query: 228 NSMTNANALKETASKEPEASSKKE--KKSKKKRRLSKKEKQQQALQQEFE----KQISDS 281
+E A +E EA+ KK+ + +KK++ ++K+K +A ++E E K+ +++
Sbjct: 1123 ---AEKKRCEEAAKREKEAAEKKKCAEAAKKEKEATEKQKCAEAAKKEKEAAEKKKCAEA 1179
Query: 282 SKSEK 286
+K EK
Sbjct: 1180 AKREK 1184
Score = 42.7 bits (99), Expect = 0.005
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 17/133 (12%)
Query: 157 IKYLISMVRISQKEKARKVDAIVL-KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISS 215
I+ ++ V+ KEKA K L +KM+E+AEK AA K+ E E E
Sbjct: 315 IRGVVKEVKKKCKEKALKKKCKDLGRKMKEEAEKKKCAALAKKQKEEDEKKA-CKELAKK 373
Query: 216 SKRTQNASNSDLNSMTNANALKETASKEPEASSKK--EKKSKKKRRLSKKEKQQQALQQE 273
K + E A+KE +A+ KK EK +K+++ ++K+K ++A ++
Sbjct: 374 KKEADEKKKCE-----------EAANKEKKAAEKKKCEKAAKERKEAAEKKKCEEAAKK- 421
Query: 274 FEKQISDSSKSEK 286
EK+ ++ K E+
Sbjct: 422 -EKEAAERKKCEE 433
Score = 42.7 bits (99), Expect = 0.005
Identities = 33/125 (26%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 169 KEKARKV-DAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
+E+A+K+ +A K+ EE+A+K +AA +K+ + ++ E +R + L
Sbjct: 1049 EERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKQCEERAKK-----L 1103
Query: 228 NSMTNANALKETASKEPEASSKK--EKKSKKKRRLSKKEKQQQALQQEFE----KQISDS 281
+E A KE EA+ KK E+ +K+++ ++K+K +A ++E E ++ +++
Sbjct: 1104 KEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAAEKKKCAEAAKKEKEATEKQKCAEA 1163
Query: 282 SKSEK 286
+K EK
Sbjct: 1164 AKKEK 1168
Score = 42.7 bits (99), Expect = 0.005
Identities = 34/123 (27%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 169 KEKARKV-DAIVLKKMEEQAEKDTKAAFQKR---SSGELESHTDSPEFISSSKRTQNASN 224
+E+A+K+ +A K+ EE+A+K +AA QK+ + +L+ + + +K+ + A+
Sbjct: 1033 EERAKKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKEKEAAE 1092
Query: 225 SDLNSMTNANALKETASKEP-EASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSK 283
A LKE A K+ E +KKEK++ +K+R + K+++ + +K+ ++++K
Sbjct: 1093 KK-QCEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAAE--KKKCAEAAK 1149
Query: 284 SEK 286
EK
Sbjct: 1150 KEK 1152
Score = 42.0 bits (97), Expect = 0.008
Identities = 32/136 (23%), Positives = 68/136 (49%), Gaps = 17/136 (12%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRS---SGELESHTDSPEFISSSKRTQNASN 224
+K + +A KK EE A+K+ + A +K+ + +++ + + ++K+ + A+
Sbjct: 576 EKAAKERKEAAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKEAAKKEKEAAE 635
Query: 225 SD--------LNSMTNANALKETASKEPEASSKK--EKKSKKKRRLSKKEKQQQALQQEF 274
+ + K+ A KE E + KK EK +KK++ ++K+K +A ++E
Sbjct: 636 REKCGELAKKIKKAAEKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCAEAAKKEK 695
Query: 275 E----KQISDSSKSEK 286
E K+ +++K EK
Sbjct: 696 EAAEKKKCEEAAKKEK 711
>gb|AAM50761.1| (AY118901) LD10524p [Drosophila melanogaster]
Length = 509
Score = 43.1 bits (100), Expect = 0.003
Identities = 36/125 (28%), Positives = 54/125 (42%), Gaps = 9/125 (7%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGEL------ESHTDSPEFISSSKRTQN 221
+K K+ K I +EE A K K + + S E+ + H ++ S+ RT+N
Sbjct: 221 KKRKSDKNKEIAEDSIEEPAAKKKK---KSKKSDEVIVIDDDDLHRNNESHTSNENRTKN 277
Query: 222 ASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDS 281
S S + T + T EA SKK+KKSK+++R EK + E S
Sbjct: 278 KSKSKDSQETTQIQEEITIDLTAEAPSKKKKKSKEEKRKDNDEKDLEETPPASEATEKKS 337
Query: 282 SKSEK 286
K K
Sbjct: 338 KKKSK 342
>ref|NP_633349.1| (NC_003901) Chemotaxis protein [Methanosarcina mazei Goe1]
gb|AAM31021.1| (AE013365) Chemotaxis protein [Methanosarcina mazei Goe1]
Length = 671
Score = 43.1 bits (100), Expect = 0.003
Identities = 29/125 (23%), Positives = 59/125 (47%), Gaps = 12/125 (9%)
Query: 166 ISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNS 225
I +K K ++V +K EE+AE+ K GE E T+ E + +
Sbjct: 161 IEEKGKRQEVKEKTGEKTEEKAEEKEK--------GEKEEETEKTEGREKEETQKTKEGE 212
Query: 226 DLNSMTNANALKETAS----KEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDS 281
+ ++E +E E K E+ +++R+ ++KE++++A+++E E++
Sbjct: 213 KIEEREKGEKIEEREKGEKIEEREKGEKTEEDEERERKNAEKEEKEKAVEKEKEEETEGR 272
Query: 282 SKSEK 286
K+EK
Sbjct: 273 EKNEK 277
>ref|NP_177807.1| (NM_106331) putative translation initiation factor IF-2
[Arabidopsis thaliana]
gb|AAF04442.1|AC010718_11 (AC010718) putative translation initiation factor IF-2; 73082-68138
[Arabidopsis thaliana]
Length = 1280
Score = 43.1 bits (100), Expect = 0.003
Identities = 27/124 (21%), Positives = 59/124 (46%), Gaps = 8/124 (6%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEF-----ISSSKRTQNA 222
+KE + A KK +++ EK+ KAA ++ +E + E + K+
Sbjct: 343 EKEGEEETAAAKKKKKKKEKEKEKKAAAAAAATSSVEVKEEKQEESVTEPLQPKKKDAKG 402
Query: 223 SNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSS 282
++ + ++E ++ EA +K+K+ ++K R KE++++ Q+E E Q ++
Sbjct: 403 KAAEKKIPKHVREMQEALARRQEAEERKKKEEEEKLR---KEEEERRRQEELEAQAEEAK 459
Query: 283 KSEK 286
+ K
Sbjct: 460 RKRK 463
>emb|CAA82046.1| (Z28201) ORF YKL201c [Saccharomyces cerevisiae]
Length = 660
Score = 43.1 bits (100), Expect = 0.003
Identities = 26/119 (21%), Positives = 56/119 (46%), Gaps = 2/119 (1%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
++EK +K + KK +E+ EK K +K+ E E E + + +
Sbjct: 537 EEEKKKKEEEE--KKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEG 594
Query: 228 NSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
M N + + E + +++E+K K++ + K E +++ Q+E EK+ ++ + +K
Sbjct: 595 EKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNEDEEKKKQEEEEKKKNEEEEKKK 653
>gb|AAC60282.1| (AF004397) chromo-helicase-DNA-binding on the Z chromosome protein
[Gallus gallus]
Length = 1808
Score = 43.1 bits (100), Expect = 0.003
Identities = 30/130 (23%), Positives = 62/130 (47%), Gaps = 14/130 (10%)
Query: 167 SQKEKAR-KVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFIS---------SS 216
S++ K R K + + K++E+ + D+ ++S + E + E +S +
Sbjct: 1328 SKRRKTRNKKNKMKASKIKEEIKSDSSPQPSEKSDEDDEEEDNKDEIVSVKHLHKKIKTE 1387
Query: 217 KRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEK 276
K + D+ A +ET KE + K+EKK K+ KKE +++ +++ E
Sbjct: 1388 KENEEKPEPDIGIKKEAEEKRETKEKENKRELKREKKEKE----DKKELKEKDNKEKREN 1443
Query: 277 QISDSSKSEK 286
++ +S++ EK
Sbjct: 1444 KVKESTQKEK 1453
>pir||S51364 sperm tail-specific protein mst101(2) - fruit fly (Drosophila hydei)
Length = 1390
Score = 43.1 bits (100), Expect = 0.003
Identities = 32/125 (25%), Positives = 69/125 (54%), Gaps = 12/125 (9%)
Query: 169 KEKARKV-DAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
+E+A+K+ +A K+ EE+A+K+ +AA +K+ + ++ E +R + +
Sbjct: 1064 EERAKKLKEAAEKKQCEERAKKEKEAAEKKQCEERAKKLKEAAEKKQCEERAKKEKEA-- 1121
Query: 228 NSMTNANALKETASKEPEASSKKE--KKSKKKRRLSKKEKQQQALQQEFE----KQISDS 281
+E A +E EA+ KK+ + +KK++ ++K+K +A ++E E K+ +++
Sbjct: 1122 ---AEKKRCEEAAKREKEAAEKKKCAEAAKKEKEATEKQKCAEAAKKEKEAAEKKKCAEA 1178
Query: 282 SKSEK 286
+K EK
Sbjct: 1179 AKREK 1183
Score = 42.7 bits (99), Expect = 0.005
Identities = 34/123 (27%), Positives = 70/123 (56%), Gaps = 8/123 (6%)
Query: 169 KEKARKV-DAIVLKKMEEQAEKDTKAAFQKR---SSGELESHTDSPEFISSSKRTQNASN 224
+E+A+K+ +A K+ EE+A+K +AA QK+ + +L+ + + +K+ + A+
Sbjct: 1032 EERAKKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKEKEAAE 1091
Query: 225 SDLNSMTNANALKETASKEP-EASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSK 283
A LKE A K+ E +KKEK++ +K+R + K+++ + +K+ ++++K
Sbjct: 1092 KK-QCEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAAE--KKKCAEAAK 1148
Query: 284 SEK 286
EK
Sbjct: 1149 KEK 1151
Score = 42.7 bits (99), Expect = 0.005
Identities = 33/125 (26%), Positives = 68/125 (54%), Gaps = 12/125 (9%)
Query: 169 KEKARKV-DAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
+E+A+K+ +A K+ EE+A+K +AA +K+ + ++ E +R + L
Sbjct: 1048 EERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKQCEERAKK-----L 1102
Query: 228 NSMTNANALKETASKEPEASSKK--EKKSKKKRRLSKKEKQQQALQQEFE----KQISDS 281
+E A KE EA+ KK E+ +K+++ ++K+K +A ++E E ++ +++
Sbjct: 1103 KEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAAEKKKCAEAAKKEKEATEKQKCAEA 1162
Query: 282 SKSEK 286
+K EK
Sbjct: 1163 AKKEK 1167
Score = 42.0 bits (97), Expect = 0.008
Identities = 32/136 (23%), Positives = 68/136 (49%), Gaps = 17/136 (12%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRS---SGELESHTDSPEFISSSKRTQNASN 224
+K + +A KK EE A+K+ + A +K+ + +++ + + ++K+ + A+
Sbjct: 575 EKAAKERKEAAEKKKCEEAAKKEKEVAERKKCEELAKKIKKAAEKKKCKEAAKKEKEAAE 634
Query: 225 SD--------LNSMTNANALKETASKEPEASSKK--EKKSKKKRRLSKKEKQQQALQQEF 274
+ + K+ A KE E + KK EK +KK++ ++K+K +A ++E
Sbjct: 635 REKCGELAKKIKKAAEKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCAEAAKKEK 694
Query: 275 E----KQISDSSKSEK 286
E K+ +++K EK
Sbjct: 695 EAAEKKKCEEAAKKEK 710
>gb|AAF57445.1| (AE003791) CG11180-PA [Drosophila melanogaster]
Length = 726
Score = 43.1 bits (100), Expect = 0.003
Identities = 36/125 (28%), Positives = 54/125 (42%), Gaps = 9/125 (7%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGEL------ESHTDSPEFISSSKRTQN 221
+K K+ K I +EE A K K + + S E+ + H ++ S+ RT+N
Sbjct: 438 KKRKSDKNKEIAEDSIEEPAAKKKK---KSKKSDEVIVIDDDDLHRNNESHTSNENRTKN 494
Query: 222 ASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDS 281
S S + T + T EA SKK+KKSK+++R EK + E S
Sbjct: 495 KSKSKDSQETTQIQEEITIDLTAEAPSKKKKKSKEEKRKDNDEKDLEETPPASEATEKKS 554
Query: 282 SKSEK 286
K K
Sbjct: 555 KKKSK 559
>ref|NP_012721.1| (NC_001143) involved in mannose metabolism; Mnn4p [Saccharomyces
cerevisiae]
sp|P36044|MNN4_YEAST MNN4 protein
pir||S78475 mannosylphosphorylation protein MNN4 - yeast (Saccharomyces
cerevisiae)
dbj|BAA11676.1| (D83006) gene required for phosphoylation of oligosaccharides/ has
high homology with YJR061w [Saccharomyces cerevisiae]
Length = 1178
Score = 43.1 bits (100), Expect = 0.003
Identities = 26/119 (21%), Positives = 56/119 (46%), Gaps = 2/119 (1%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
++EK +K + KK +E+ EK K +K+ E E E + + +
Sbjct: 1055 EEEKKKKEEEE--KKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEG 1112
Query: 228 NSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
M N + + E + +++E+K K++ + K E +++ Q+E EK+ ++ + +K
Sbjct: 1113 EKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNEDEEKKKQEEEEKKKNEEEEKKK 1171
>pir||S38038 hypothetical protein YKL201c - yeast (Saccharomyces cerevisiae)
Length = 539
Score = 43.1 bits (100), Expect = 0.003
Identities = 26/119 (21%), Positives = 56/119 (46%), Gaps = 2/119 (1%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
++EK +K + KK +E+ EK K +K+ E E E + + +
Sbjct: 416 EEEKKKKEEEE--KKKKEEEEKKKKEEEEKKKKEEEEKKKQEEEEKKKKEEEEKKKQEEG 473
Query: 228 NSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
M N + + E + +++E+K K++ + K E +++ Q+E EK+ ++ + +K
Sbjct: 474 EKMKNEDEENKKNEDEEKKKNEEEEKKKQEEKNKKNEDEEKKKQEEEEKKKNEEEEKKK 532
>gb|AAA98076.1| (L41834) nuclear protein [Ensis minor]
Length = 505
Score = 42.7 bits (99), Expect = 0.005
Identities = 35/127 (27%), Positives = 61/127 (47%), Gaps = 11/127 (8%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFIS---SSKRTQNASN 224
+K K RK A + ++ + ++A +KR S + T S S R ++AS
Sbjct: 87 RKSKPRKKSASKKRSASKKRKSRKRSASKKRKSASRKRSTSKKRSASKKRSKSRKRSASR 146
Query: 225 SDLNSMTNANALKETASKEPEAS-----SKKEKKSKKK---RRLSKKEKQQQALQQEFEK 276
+ N+ TN +A K + S++ AS S+K SKK+ R+ S +K+ + ++ K
Sbjct: 147 NKSNNNTNNSAKKRSRSRKRSASKKRSRSRKRSASKKRSHSRKRSASKKRSHSRKRSASK 206
Query: 277 QISDSSK 283
+ S S K
Sbjct: 207 KRSHSRK 213
>gb|AAL10509.1| (AY042084) maebl [Plasmodium falciparum]
Length = 2055
Score = 42.7 bits (99), Expect = 0.005
Identities = 28/120 (23%), Positives = 54/120 (44%), Gaps = 2/120 (1%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
+KE+ K LKK EE+ +K + ++ ++++ + K+ + +
Sbjct: 1605 KKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKAEQLKKKEEEEKKKAEELKKEEE 1664
Query: 228 NSMTNANALK--ETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSE 285
A LK E K+ E KKE++ KKK KKE+++ ++ E K+ + K +
Sbjct: 1665 EEKKKAEQLKKEEEEKKKVEQLKKKEEEEKKKAEQLKKEEEENKIKVEQLKKEEEEEKKK 1724
>gb|AAL96708.1| (AC116330) hypothetical protein [Dictyostelium discoideum]
Length = 522
Score = 42.7 bits (99), Expect = 0.005
Identities = 25/91 (27%), Positives = 44/91 (47%), Gaps = 6/91 (6%)
Query: 196 QKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSK 255
+KRS +E+ + E + +LN K+ ++ E KKEKK K
Sbjct: 3 KKRSKENIENESSDEEIEKKKLKRDKHEEKELNKKE-----KKEKKEKKEKKEKKEKKEK 57
Query: 256 KKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
K+++ KKEK+++ + + +K SD S+ K
Sbjct: 58 KEKK-EKKEKKEKKDENDLDKGCSDKSRDNK 87
>gb|AAM43671.1| (AC117177) hypothetical protein [Dictyostelium discoideum]
Length = 455
Score = 42.7 bits (99), Expect = 0.005
Identities = 24/112 (21%), Positives = 55/112 (48%)
Query: 167 SQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSD 226
S+ E + + + E ++EK+ +S E E+ +DS S K+ + + +SD
Sbjct: 96 SESESESENSSSSESESESESEKNQDKKKINKSDSESETDSDSESEADSDKKKKESDSSD 155
Query: 227 LNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQI 278
+ ++++ KET +K+ ++KKE S + + + ++E E+++
Sbjct: 156 SSDSESSDSDKETENKDKNKTNKKESSSSDESDNNSSAESSSEEEEEDEEEV 207
>gb|AAF49848.1| (AE003539) CG11274 gene product [Drosophila melanogaster]
Length = 954
Score = 42.7 bits (99), Expect = 0.005
Identities = 35/128 (27%), Positives = 62/128 (48%), Gaps = 13/128 (10%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKR-----SSGELESHTDSPEFISSSKRTQNA 222
Q+ K+++ A+ K+ E + EKD + + +K SSG+ ES + ++R +
Sbjct: 768 QQRKSKEAAALKGKEKEHEKEKDKRRSDKKSKRGAISSGDEESTSSRKRGHKKTRRDEAG 827
Query: 223 SNSDLNSMTNANALKETASKEPEAS------SKKEKKSKKKRRLSKKEKQQQALQQEFE- 275
NSD ++ A K ++S S K KK KK ++ SKK K+ + +++
Sbjct: 828 DNSDSEDEHVPKKKRKKAKKPADSSDSDSEASSKRKKHKKHKKHSKKSKKHKKHKRKCSA 887
Query: 276 -KQISDSS 282
K +DSS
Sbjct: 888 GKSRADSS 895
>gb|AAC67538.1| (AF081799) developmental protein DG1071 [Dictyostelium discoideum]
Length = 581
Score = 42.7 bits (99), Expect = 0.005
Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
Q +++K K+ +E+ EK K K+ SGE E D N +
Sbjct: 438 QPAESKKKQKKEKKEKKEKKEKKEKKKKSKKVSGEGEEGADD----------NNDTEQQQ 487
Query: 228 NSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
M KE K+ +K+KK KK++R KK+++++ + E + + ++ E+
Sbjct: 488 EEMAEDGDHKEKKKKKKSKKDRKDKKDKKQKRKEKKQREKEEREGEEDDENEETENREE 546
>ref|XP_130275.1| (XM_130275) similar to matrin cyclophilin (matrin-cyp) [Mus
musculus]
Length = 559
Score = 42.4 bits (98), Expect = 0.006
Identities = 19/69 (27%), Positives = 43/69 (61%)
Query: 217 KRTQNASNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEK 276
K + ++S+SD +S +++ + E++ E + K K+ KK R+ S+K K+++ +++ +K
Sbjct: 192 KSSSSSSSSDSDSSSDSQSSSESSDSESASEEKSRKRKKKHRKNSRKHKKEKKKRKKSKK 251
Query: 277 QISDSSKSE 285
S S++E
Sbjct: 252 SPSSESEAE 260
>dbj|BAA97098.1| (AP002460) gene_id:F1D9.26~unknown protein [Arabidopsis thaliana]
Length = 260
Score = 42.4 bits (98), Expect = 0.006
Identities = 25/123 (20%), Positives = 56/123 (45%)
Query: 164 VRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNAS 223
+R +K+K +K KK +++ +K K +K+ + + + K+ +
Sbjct: 5 IRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 64
Query: 224 NSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSK 283
K+ K+ + KK+KK KKK++ KK+K+++ +++ +K+ K
Sbjct: 65 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 124
Query: 284 SEK 286
+K
Sbjct: 125 KKK 127
Score = 42.0 bits (97), Expect = 0.008
Identities = 26/124 (20%), Positives = 56/124 (44%)
Query: 163 MVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNA 222
M R +K+K +K KK +++ +K K +K+ + + + K+ +
Sbjct: 1 MDRCIRKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 60
Query: 223 SNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSS 282
K+ K+ + KK+KK KKK++ KK+K+++ +++ +K+
Sbjct: 61 KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK 120
Query: 283 KSEK 286
K +K
Sbjct: 121 KKKK 124
>ref|NP_013276.1| (NC_001144) major low affinity 55 kDa Centromere/microtubule
binding protein; Cbf5p [Saccharomyces cerevisiae]
sp|P33322|CBF5_YEAST Centromere/microtubule binding protein CBF5 (Centromere-binding
factor 5) (Nucleolar protein CBF5) (P64')
pir||S41853 centromere/microtubule-binding protein CBF5 [validated] - yeast
(Saccharomyces cerevisiae)
gb|AAA34473.1| (L12351) centromere/microtubule binding protein [Saccharomyces
cerevisiae]
gb|AAB67463.1| (U17246) Cbf5p: centromere/microtubule binding protein
[Saccharomyces cerevisiae]
Length = 483
Score = 42.4 bits (98), Expect = 0.006
Identities = 34/127 (26%), Positives = 63/127 (48%), Gaps = 7/127 (5%)
Query: 166 ISQKEKARKVDAIVLK--KMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNAS 223
++QK+K K D + K ++ E + K + + E +S + S E + + + A
Sbjct: 355 VAQKKKQMKADGKLDKYGRVNENTPEQWKKEYVPLDNAE-QSTSSSQETKETEEEPKKAK 413
Query: 224 NSDL--NSMTNANALKETASKEP--EASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQIS 279
L T +KE SK+ E KKEKK KK+++ K++K+++ +++ E S
Sbjct: 414 EDSLIKEVETEKEEVKEDDSKKEKKEKKDKKEKKEKKEKKDKKEKKEKKEKKRKSEDGDS 473
Query: 280 DSSKSEK 286
+ KS+K
Sbjct: 474 EEKKSKK 480
>sp|Q9U7E0|ATRX_CAEEL Transcriptional regulator ATRX homolog (X-linked nuclear protein-1)
gb|AAD55361.1|AF134186_1 (AF134186) XNP-1 [Caenorhabditis elegans]
Length = 1359
Score = 42.0 bits (97), Expect = 0.008
Identities = 33/127 (25%), Positives = 52/127 (39%), Gaps = 8/127 (6%)
Query: 162 SMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQN 221
S ++ QK+K + E++ + + K+ S + + T S E S+ +
Sbjct: 106 SKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSS-ESSEESEEERK 164
Query: 222 ASNSDLNSMTNANALKETA--SKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQIS 279
S N + ET+ S E E SKK KK L KK K + + E EK++
Sbjct: 165 VKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKG-----LKKKAKSESESESEDEKEVK 219
Query: 280 DSSKSEK 286
S K K
Sbjct: 220 KSKKKSK 226
>gb|AAM43735.1| (AC116987) hypothetical protein [Dictyostelium discoideum]
Length = 772
Score = 42.0 bits (97), Expect = 0.008
Identities = 28/104 (26%), Positives = 52/104 (49%), Gaps = 2/104 (1%)
Query: 183 MEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNSMTNANALKETASK 242
+EEQ+E+ K + K + + + SSS + N +N++ N+ N K+
Sbjct: 59 LEEQSEEFEKE-YNKLKKEQKQENLKLSSSSSSSSSSSNNNNNNNNNRDNTIKDKKDKKD 117
Query: 243 EPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSEK 286
+ + KK+KK K+K + KKEK+ + + + EK+ K +K
Sbjct: 118 KKDKKDKKDKKEKEKEK-DKKEKKDKKEKDKKEKKDKKDKKDKK 160
>ref|NP_491423.1| (NM_059022) helicase [Caenorhabditis elegans]
pir||T34036 hypothetical protein B0041.7 - Caenorhabditis elegans
gb|AAC24256.1| (AF000196) C. elegans XNP-1 protein (corresponding sequence
B0041.7) [Caenorhabditis elegans]
Length = 1359
Score = 42.0 bits (97), Expect = 0.008
Identities = 33/127 (25%), Positives = 52/127 (39%), Gaps = 8/127 (6%)
Query: 162 SMVRISQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQN 221
S ++ QK+K + E++ + + K+ S + + T S E S+ +
Sbjct: 106 SKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSS-ESSEESEEERK 164
Query: 222 ASNSDLNSMTNANALKETA--SKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQIS 279
S N + ET+ S E E SKK KK L KK K + + E EK++
Sbjct: 165 VKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKG-----LKKKAKSESESESEDEKEVK 219
Query: 280 DSSKSEK 286
S K K
Sbjct: 220 KSKKKSK 226
>ref|NP_504585.1| (NM_072184) Y38B5A.1.p [Caenorhabditis elegans]
gb|AAF59460.2| (AC024760) Hypothetical protein Y38B5A.1 [Caenorhabditis elegans]
Length = 2083
Score = 42.0 bits (97), Expect = 0.008
Identities = 28/116 (24%), Positives = 50/116 (42%), Gaps = 7/116 (6%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDL 227
QKEK + KK + +KD K +K S T P+ + + + ++
Sbjct: 1575 QKEKQKLESEATSKKPTSEKQKDEKTPQEKAKSENETVMTTEPQQLEVKSEPKKSDKTE- 1633
Query: 228 NSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSK 283
KE AS ++ K K+ K+K+++ KK+K Q+ ++ SD S+
Sbjct: 1634 ------TVEKEVASSTEKSDDSKTKEPKEKKKIIKKKKDTTKPQEASKELSSDESR 1683
>gb|AAF51438.1| (AE003588) CG4124 gene product [alt 1] [Drosophila melanogaster]
gb|AAF51439.1| (AE003588) CG4124 gene product [alt 2] [Drosophila melanogaster]
Length = 1071
Score = 42.0 bits (97), Expect = 0.008
Identities = 31/118 (26%), Positives = 52/118 (43%), Gaps = 3/118 (2%)
Query: 167 SQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSD 226
++K K+ K D K+ E++ EKD K S SH S SSS ++ ++ +S
Sbjct: 215 NKKHKSSKSDKS--KRSEKEREKDRKKESSSHRSSS-SSHKSSSSSSSSSSKSSSSKSSS 271
Query: 227 LNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKS 284
+S ++ ++ + K+ SS S K R S + + + K S SS S
Sbjct: 272 SSSSSHRSSSDKYRDKDKARSSSGSSSSSKDRERSSGSSSSSSNKHKSSKSSSSSSSS 329
>ref|NP_498673.1| (NM_066272) ZK783.4.p [Caenorhabditis elegans]
pir||T34516 hypothetical protein ZK783.4 - Caenorhabditis elegans
gb|AAC24421.1| (U13646) Hypothetical protein ZK783.4 [Caenorhabditis elegans]
Length = 1430
Score = 42.0 bits (97), Expect = 0.008
Identities = 29/116 (25%), Positives = 59/116 (50%), Gaps = 4/116 (3%)
Query: 170 EKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSDLNS 229
+K++ +AI KKM + A+K A SS S T S S + NA+N+ ++
Sbjct: 163 QKSQMEEAI--KKMMDMAKKKP-AGVASTSSASTSSSTPSTSSASITSSNNNAANNAASN 219
Query: 230 MTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKSE 285
M N N + + + + + ++++K +K+ K+ ++ A QQ+ E+ + + + E
Sbjct: 220 MMN-NVMWQLVAAQMQQKQQQQQKDTQKKADQAKKAKELAKQQQKEQDVKNKQQEE 274
>pir||T49717 related to BCS1 protein precursor [imported] - Neurospora crassa
emb|CAB91698.1| (AL356172) related to BCS1 protein precursor [Neurospora crassa]
Length = 779
Score = 42.0 bits (97), Expect = 0.008
Identities = 33/112 (29%), Positives = 58/112 (51%), Gaps = 16/112 (14%)
Query: 168 QKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRT-------- 219
++EK K +A KK ++ EK K + + S + H SSSK++
Sbjct: 587 RREKEEKAEAE--KKGTKKEEKGGKDKTETKKSKKSSKHNKVTSKKSSSKKSTMKAAISD 644
Query: 220 ----QNASNSDLNSMTNANALKETASKEPEASSKKE--KKSKKKRRLSKKEK 265
N+S+S +S +++++ +++S E E+ S+ E K+ K KR+ SKKEK
Sbjct: 645 ADFSDNSSSSSSSSSSSSSSSTKSSSSESESESEPERFKEKKSKRKHSKKEK 696
>gb|AAF40306.1|AF156667_1 (AF156667) RNA helicase [Vigna radiata]
Length = 713
Score = 42.0 bits (97), Expect = 0.008
Identities = 26/106 (24%), Positives = 54/106 (50%), Gaps = 9/106 (8%)
Query: 181 KKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSS------KRTQNASNSDLNSMTNAN 234
K+ ++A+ + +K+S+ +L S ++P+ K+ + SD+ +M N
Sbjct: 18 KQSAKKAKNQSPTIAEKKSASKLLSDPNTPDPDQDGVSGKLQKKAKKRKASDIEAMAATN 77
Query: 235 ALKETASKE---PEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQ 277
E S E PE+S + + K KKK++ +K E+Q ++ E +++
Sbjct: 78 DADEDTSSELVEPESSREDDHKKKKKKKKAKSEEQPLVMEAEEKEE 123
>ref|NP_608554.1| (NM_134710) CG4124 gene product [Drosophila melanogaster]
gb|AAL29158.1| (AY061610) SD07532p [Drosophila melanogaster]
Length = 628
Score = 42.0 bits (97), Expect = 0.008
Identities = 31/118 (26%), Positives = 52/118 (43%), Gaps = 3/118 (2%)
Query: 167 SQKEKARKVDAIVLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNASNSD 226
++K K+ K D K+ E++ EKD K S SH S SSS ++ ++ +S
Sbjct: 279 NKKHKSSKSDKS--KRSEKEREKDRKKESSSHRSSS-SSHKSSSSSSSSSSKSSSSKSSS 335
Query: 227 LNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSSKS 284
+S ++ ++ + K+ SS S K R S + + + K S SS S
Sbjct: 336 SSSSSHRSSSDKYRDKDKARSSSGSSSSSKDRERSSGSSSSSSNKHKSSKSSSSSSSS 393
>gb|AAC34964.1| (AF023853) ElpB2 [Borrelia burgdorferi]
gb|AAF29801.1|AF169008_28 (AF169008) ORF29/ElpB2 [Borrelia burgdorferi]
Length = 406
Score = 42.0 bits (97), Expect = 0.008
Identities = 26/124 (20%), Positives = 59/124 (46%), Gaps = 5/124 (4%)
Query: 168 QKEKARKVDAI-----VLKKMEEQAEKDTKAAFQKRSSGELESHTDSPEFISSSKRTQNA 222
Q++KA++ ++ V K E+Q + K +K E +T E I K+ Q
Sbjct: 111 QEQKAKEAESKGEEEKVEGKKEKQDSEKGKVEEKKEKQENAEGNTKGKEVIEQQKKQQEE 170
Query: 223 SNSDLNSMTNANALKETASKEPEASSKKEKKSKKKRRLSKKEKQQQALQQEFEKQISDSS 282
+ + ++ ++ E ++ K+ ++++R +K+E++QQ +E E+Q +
Sbjct: 171 TAKKAKAQKEKREREQKIQQKQEEQQRRAKEEEEQQRRAKEEEEQQRRAKEEEEQQRRAK 230
Query: 283 KSEK 286
+ E+
Sbjct: 231 EEEE 234
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.310 0.126 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 157,846,297
Number of Sequences: 1026957
Number of extensions: 6500550
Number of successful extensions: 75612
Number of sequences better than 1.0e-02: 57
Number of HSP's better than 0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 73512
Number of HSP's gapped (non-prelim): 750
length of query: 286
length of database: 324,149,939
effective HSP length: 120
effective length of query: 166
effective length of database: 200,915,099
effective search space: 33351906434
effective search space used: 33351906434
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 97 (42.0 bits)