BLASTP 2.2.1 [Apr-13-2001]


Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|15645950|ref|NP_208129.1| conserved hypothetical
protein [Helicobacter pylori 26695]
         (174 letters)

Database: /home/scwang/download_20020708_db/nr
           1,026,957 sequences; 324,149,939 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_208129.1|  (NC_000915) conserved hypothetical protein...   347  3e-95
ref|NP_223974.1|  (NC_000921) putative [Helicobacter pylori ...   324  3e-88
ref|NP_282545.1|  (NC_002163) hypothetical protein Cj1404 [C...   114  6e-25
ref|NP_110024.1|  (NC_000912) bidomain: nucleotidyl transfer...    90  9e-18
ref|NP_563041.1|  (NC_003366) conserved hypothetical protein...    84  7e-16
ref|NP_213012.1|  (NC_000918) hypothetical protein [Aquifex ...    84  9e-16
ref|NP_347893.1|  (NC_003030) Predicted nucleotidyltransfera...    82  3e-15
ref|NP_227913.1|  (NC_000853) conserved hypothetical protein...    82  3e-15
ref|NP_604029.1|  (NC_003454) Nicotinate-nucleotide adenylyl...    80  1e-14
ref|NP_346183.1|  (NC_003028) conserved hypothetical protein...    79  2e-14
ref|NP_268649.1|  (NC_002737) conserved hypothetical protein...    76  2e-13
ref|NP_078306.1|  (NC_002162) conserved hypothetical [Ureapl...    74  5e-13
ref|NP_326166.1|  (NC_002771) conserved hypothetical protein...    74  7e-13
ref|NP_606566.1|  (NC_003485) conserved hypothetical protein...    73  2e-12
ref|NP_212916.1|  (NC_001318) conserved hypothetical protein...    70  8e-12
sp|O51723|NADD_BORBU  Probable nicotinate-nucleotide adenyly...    70  8e-12
ref|NP_372118.1|  (NC_002758) conserved hypothetical protein...    70  1e-11
ref|NP_622570.1|  (NC_003869) Nicotinic acid mononucleotide ...    67  1e-10
ref|NP_660763.1|  (NC_004061) hypothetical 24.5 kD protein i...    65  3e-10
ref|NP_267255.1|  (NC_002662) HYPOTHETICAL PROTEIN [Lactococ...    64  9e-10
ref|NP_252695.1|  (NC_002516) hypothetical protein [Pseudomo...    64  9e-10
ref|NP_348406.1|  (NC_003030) Predicted nucleotidyltransfera...    64  9e-10
ref|NP_406133.1|  (NC_003143) putative nicotinate-nucleotide...    62  4e-09
ref|NP_275016.1|  (NC_003112) conserved hypothetical protein...    61  6e-09
ref|NP_390442.1|  (NC_000964) similar to hypothetical protei...    61  6e-09
ref|NP_283243.1|  (NC_003116) hypothetical protein NMA0416 [...    60  8e-09
ref|NP_240258.1|  (NC_002528) hypothetical protein [Buchnera...    60  1e-08
ref|NP_242192.1|  (NC_002570) nicotinate-nucleotide adenylyl...    60  1e-08
ref|NP_520314.1|  (NC_003295) CONSERVED HYPOTHETICAL PROTEIN...    58  4e-08
ref|NP_658363.1|  (NC_003995) Cytidylyltransf, Cytidylyltran...    58  4e-08
ref|NP_660922.1|  (NC_002932) nicotinate-nucleotide adenyltr...    57  7e-08
ref|NP_455221.1|  (NC_003198) conserved hypothetical protein...    57  9e-08
ref|NP_459637.1|  (NC_003197) putative Nicotinic acid mononu...    57  9e-08
ref|NP_489103.1|  (NC_003272) nicotinate-nucleotide adenylyl...    56  2e-07
ref|NP_266381.1|  (NC_002662) HYPOTHETICAL PROTEIN [Lactococ...    56  2e-07
ref|NP_286365.1|  (NC_002655) orf, hypothetical protein [Esc...    56  2e-07
ref|NP_415172.1|  (NC_000913) orf, hypothetical protein [Esc...    56  2e-07
ref|NP_219178.1|  (NC_000919) conserved hypothetical protein...    56  2e-07
ref|NP_440593.1|  (NC_000911) unknown protein [Synechocystis...    54  7e-07
ref|NP_216937.1|  (NC_000962) hypothetical protein Rv2421c [...    54  1e-06
ref|NP_465013.1|  (NC_003210) similar to unknown proteins [L...    54  1e-06
pir||S73826  MG240 homolog F10_orf291 - Mycoplasma pneumonia...    53  1e-06
dbj|BAB99745.1|  (AP005281) Nicotinic acid mononucleotide ad...    52  3e-06
ref|NP_601553.1|  (NC_003450) COG1057:Nicotinic acid mononuc...    52  3e-06
ref|NP_072906.1|  (NC_000908) conserved hypothetical protein...    51  6e-06
ref|NP_637964.1|  (NC_003902) nicotinate-nucleotide adenylyl...    51  6e-06
ref|NP_302026.1|  (NC_002677) conserved hypothetical protein...    50  8e-06
pir||S48587  hypothetical protein - Mycoplasma capricolum (f...    50  1e-05
ref|NP_470859.1|  (NC_003212) similar to unknown proteins [L...    49  2e-05
ref|NP_299458.1|  (NC_002488) conserved hypothetical protein...    48  4e-05
ref|NP_626817.1|  (NC_003888) putative nicotinate-nucleotide...    48  5e-05
sp|Q9RDK7|NADD_STRCO  Probable nicotinate-nucleotide adenyly...    45  3e-04
ref|NP_422225.1|  (NC_002696) conserved hypothetical protein...    45  3e-04
ref|NP_486523.1|  (NC_003272) nicotinate-nucleotide adenylyl...    45  3e-04
ref|NP_246242.1|  (NC_002663) KdtB [Pasteurella multocida] >...    45  5e-04
ref|NP_232607.1|  (NC_002506) conserved hypothetical protein...    43  0.002
ref|NP_253604.1|  (NC_002516) hypothetical protein [Pseudomo...    43  0.002
pir||B53293  flm3 region hypothetical protein 2 - Synechococ...    43  0.002
sp|Q55235|COAD_SYNP7  Phosphopantetheine adenylyltransferase...    43  0.002
ref|NP_355708.1|  (NC_003062) AGR_C_5040p [Agrobacterium tum...    43  0.002
ref|NP_488740.1|  (NC_003272) pantetheine-phosphate adenylyl...    43  0.002
ref|NP_104985.1|  (NC_002678) NICOTINATE-NUCLEOTIDE ADENYLYL...    42  0.002
>ref|NP_208129.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
           26695]
 sp|O25895|NADD_HELPY Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||A64687 conserved hypothetical protein HP1337 - Helicobacter pylori
           (strain 26695)
 gb|AAD08379.1| (AE000635) conserved hypothetical protein [Helicobacter pylori
           26695]
          Length = 174

 Score =  347 bits (891), Expect = 3e-95
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MNTMNSVLKYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLD 60
           MNTMNSVLKYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLD
Sbjct: 1   MNTMNSVLKYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLD 60

Query: 61  AQTRFKELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRH 120
           AQTRFKELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRH
Sbjct: 61  AQTRFKELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRH 120

Query: 121 LSSWTNAKELLKRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIRASLGV 174
           LSSWTNAKELLKRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIRASLGV
Sbjct: 121 LSSWTNAKELLKRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIRASLGV 174
>ref|NP_223974.1| (NC_000921) putative [Helicobacter pylori J99]
 sp|Q9ZJP8|NADD_HELPJ Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||B71829 hypothetical protein jhp1256 - Helicobacter pylori (strain J99)
 gb|AAD06842.1| (AE001549) putative [Helicobacter pylori J99]
          Length = 174

 Score =  324 bits (830), Expect = 3e-88
 Identities = 163/174 (93%), Positives = 168/174 (95%)

Query: 1   MNTMNSVLKYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLD 60
           MNTMNSVL+ KELALYGGSFDPLHKAHLAIIEQTLELLP  +LIVLPAYQNPFKKPCFLD
Sbjct: 1   MNTMNSVLECKELALYGGSFDPLHKAHLAIIEQTLELLPFVQLIVLPAYQNPFKKPCFLD 60

Query: 61  AQTRFKELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRH 120
           A+TRFKELERALKG+ RVLLSDFEIKQERAVPTIESVLHFQKLY P+TLYLVIGADCLRH
Sbjct: 61  AKTRFKELERALKGMPRVLLSDFEIKQERAVPTIESVLHFQKLYRPKTLYLVIGADCLRH 120

Query: 121 LSSWTNAKELLKRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIRASLGV 174
           LSSWTNAKELLKRVELVVFERIGYEEIQFKG YHPLKGIDAPISSSAIRASLGV
Sbjct: 121 LSSWTNAKELLKRVELVVFERIGYEEIQFKGRYHPLKGIDAPISSSAIRASLGV 174
>ref|NP_282545.1| (NC_002163) hypothetical protein Cj1404 [Campylobacter jejuni]
 sp|Q9PMQ3|NADD_CAMJE Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||D81285 hypothetical protein Cj1404 [imported] - Campylobacter jejuni
           (strain NCTC 11168)
 emb|CAB73828.1| (AL139078) hypothetical protein Cj1404 [Campylobacter jejuni]
          Length = 181

 Score =  114 bits (284), Expect = 6e-25
 Identities = 65/161 (40%), Positives = 98/161 (60%), Gaps = 4/161 (2%)

Query: 12  ELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERA 71
           ++AL+GGSFDP H  H +++ + LE L   KLI++P Y NPFK+    D + RF  +++ 
Sbjct: 2   KIALFGGSFDPPHNGHNSVVLEALEKLDIDKLIIMPTYINPFKQSFSADEKQRFLWVKKL 61

Query: 72  LKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKELL 131
              + +V + DFEI+Q+R VP+IESV +  KLY+P   YL+IGAD L  L  W + ++L 
Sbjct: 62  WGHLPKVEICDFEIRQKRPVPSIESVKYLYKLYNPSKFYLLIGADHLEKLHLWHDFEKLN 121

Query: 132 KRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIRASL 172
             VE V+  R    +I    ++  LK  +  I+SS IR +L
Sbjct: 122 SLVEFVIANR---NDIGIPKNFKDLK-TNKKIASSFIRDTL 158
>ref|NP_110024.1| (NC_000912) bidomain: nucleotidyl transferase and conserved
           hypo-thetical second domain, probably phosphopantetheine
           adenylyltransferase activity [Mycoplasma pneumoniae]
 sp|P75442|Y240_MYCPN Hypothetical protein MG240 homolog (F10_orf291)
 gb|AAB96148.2| (AE000049) bidomain: nucleotidyl transferase and conserved
           hypo-thetical second domain, probably phosphopantetheine
           adenylyltransferase activity [Mycoplasma pneumoniae]
          Length = 344

 Score = 90.1 bits (222), Expect = 9e-18
 Identities = 45/130 (34%), Positives = 76/130 (57%), Gaps = 1/130 (0%)

Query: 15  LYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALKG 74
           ++GG+FDPLH+AH+ I ++ ++ + + KL  +P  +  FK P     Q R   L  ALK 
Sbjct: 2   IFGGAFDPLHQAHIYIAKRAVQAIKAQKLYFVPTAKAFFKSPIKASNQARLAMLRVALKA 61

Query: 75  IDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKELLKRV 134
           + ++ +S+F+IK +    +  +V HF++ +    LY +IG+D L  L+ W N ++L K  
Sbjct: 62  LPQMAVSNFDIKAQNGF-SFNTVQHFKQRFPNAELYFLIGSDKLSELAKWHNIEQLQKLC 120

Query: 135 ELVVFERIGY 144
             V +ER GY
Sbjct: 121 RFVCYERFGY 130
>ref|NP_563041.1| (NC_003366) conserved hypothetical protein [Clostridium
           perfringens]
 dbj|BAB81831.1| (AP003193) conserved hypothetical protein [Clostridium perfringens]
          Length = 202

 Score = 84.0 bits (206), Expect = 7e-16
 Identities = 42/137 (30%), Positives = 81/137 (58%), Gaps = 1/137 (0%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKK-PCFLDAQTRFKELE 69
           K++ ++GG+FDP+H  H+ I  +  ++L   ++I +PA   P KK     D   R++ ++
Sbjct: 2   KKIGVFGGTFDPIHIGHIYIAYEAYKILELDEVIFMPAGNPPHKKWKDITDEIIRYEMVK 61

Query: 70  RALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKE 129
           +A++      ++++EI+++    T E++ +  + +    LY + GADCL +L+SW N  E
Sbjct: 62  KAIEPYSFFSINNYEIEKKGLSFTYETLRYLHESFKEVELYFITGADCLVNLNSWKNINE 121

Query: 130 LLKRVELVVFERIGYEE 146
           + K   LVVF R G+++
Sbjct: 122 IFKFSNLVVFNRPGFDK 138
>ref|NP_213012.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
 sp|O66452|NADD_AQUAE Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||A70303 conserved hypothetical protein aq_036 - Aquifex aeolicus
 gb|AAC06417.1| (AE000670) hypothetical protein [Aquifex aeolicus]
          Length = 168

 Score = 83.6 bits (205), Expect = 9e-16
 Identities = 40/132 (30%), Positives = 74/132 (55%)

Query: 15  LYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALKG 74
           ++GGSFDP+H  H+ +     E   + ++I +P YQ P K+     AQ R   L+ AL+ 
Sbjct: 4   VFGGSFDPVHVGHIILARDVCEHFNAKEVIFVPTYQAPLKEKHKASAQDRLNMLKLALER 63

Query: 75  IDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKELLKRV 134
            ++  + D+EI+++    T+ ++ + ++ Y  + LYL++G+D       W   +E+LK  
Sbjct: 64  EEKFTIEDYEIRRKGISYTVYTLKYLKEKYGGEELYLLLGSDSFLKFHKWKEPREILKLA 123

Query: 135 ELVVFERIGYEE 146
           +++V ER G  E
Sbjct: 124 KIIVVEREGMLE 135
>ref|NP_347893.1| (NC_003030) Predicted nucleotidyltransferases of NarD/TagD family
           (N-term. domain) , yqeJ ortholog [Clostridium
           acetobutylicum]
 gb|AAK79233.1|AE007639_6 (AE007639) Predicted nucleotidyltransferases of NarD/TagD family
           (N-term. domain) , yqeJ ortholog [Clostridium
           acetobutylicum]
          Length = 200

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 43/139 (30%), Positives = 76/139 (53%), Gaps = 1/139 (0%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFK-KPCFLDAQTRFKELE 69
           K+ A++GG+F+P+H AHL I  +++E L   +LI +P+   P K +     A+ R++ ++
Sbjct: 2   KKKAIFGGTFNPIHNAHLNIAAKSIEKLQLDELIFVPSGNPPHKSEKGIAPAELRYEMVK 61

Query: 70  RALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKE 129
            A+K   +  + D+EIK++    T E++ HF +       + + G D L  L  W N   
Sbjct: 62  EAIKDNCKFRIDDYEIKKKGISYTYETLEHFSRSQKDVDWFFIAGLDSLMDLDKWRNVNT 121

Query: 130 LLKRVELVVFERIGYEEIQ 148
           +L   + +VF R GY + Q
Sbjct: 122 ILSLCKFIVFNRSGYNKSQ 140
>ref|NP_227913.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
 sp|Q9WXV2|NADD_THEMA Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||A72418 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
 gb|AAD35191.1|AE001696_5 (AE001696) conserved hypothetical protein [Thermotoga maritima]
          Length = 205

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 39/129 (30%), Positives = 78/129 (60%), Gaps = 2/129 (1%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERAL 72
           + ++GGSFDP+H  H+ +   TLE+L   +LIV+P +  P KK      + RF+ L++  
Sbjct: 16  IGIFGGSFDPVHTGHVLVSVYTLEILDLDRLIVVPVFNPPHKK-TVAPFEKRFEWLKKVF 74

Query: 73  KGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKELLK 132
           +G++++ +SD+E ++     +I ++ +F ++Y  +  + ++G D L +   W   +++LK
Sbjct: 75  EGMEKMEVSDYEKRRGGVSYSIFTIEYFSEIYKTKP-FFIVGEDALSYFEKWYRYRDILK 133

Query: 133 RVELVVFER 141
           +  LVV+ R
Sbjct: 134 KSTLVVYPR 142
>ref|NP_604029.1| (NC_003454) Nicotinate-nucleotide adenylyltransferase;
           Nicotinamide-nucleotide adenylyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
 gb|AAL95328.1| (AE010618) Nicotinate-nucleotide adenylyltransferase;
           Nicotinamide-nucleotide adenylyltransferase
           [Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
          Length = 193

 Score = 79.7 bits (195), Expect = 1e-14
 Identities = 46/149 (30%), Positives = 78/149 (51%), Gaps = 1/149 (0%)

Query: 12  ELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERA 71
           ++A+YGGSF+P+H  H  I++  L+ L   K+I++P      ++     + TR K  +  
Sbjct: 2   KIAIYGGSFNPMHIGHEKIVDYVLKNLDMDKIIIIPVGIPSHRENNLEQSDTRLKICKEI 61

Query: 72  LKGIDRVLLSDFEIKQERAVPTIESVLHFQKLY-HPQTLYLVIGADCLRHLSSWTNAKEL 130
            K   +V +SD EIK E    T +++L   ++Y      + +IG D L++L +W N KEL
Sbjct: 62  FKNNKKVEVSDIEIKAEGKSYTYDTLLKLIEIYGKDNEFFEIIGEDSLKNLKTWRNYKEL 121

Query: 131 LKRVELVVFERIGYEEIQFKGHYHPLKGI 159
           L   + +VF R   + I+    +   K I
Sbjct: 122 LNLCKFIVFRRKDDKNIEIDNEFLNNKNI 150
>ref|NP_346183.1| (NC_003028) conserved hypothetical protein [Streptococcus
           pneumoniae TIGR4]
 ref|NP_359184.1| (NC_003098) Conserved hypothetical protein [Streptococcus
           pneumoniae R6]
 gb|AAK75823.1| (AE007467) conserved hypothetical protein [Streptococcus pneumoniae
           TIGR4]
 gb|AAL00395.1| (AE008526) Conserved hypothetical protein [Streptococcus pneumoniae
           R6]
          Length = 209

 Score = 79.0 bits (193), Expect = 2e-14
 Identities = 49/165 (29%), Positives = 88/165 (52%), Gaps = 8/165 (4%)

Query: 9   KYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNP-FKKPCFLDAQTRFKE 67
           K K++ + GG+F+P+H AHL + +Q  + L   +++++P YQ P   K   +    R K 
Sbjct: 22  KRKQVGILGGNFNPVHNAHLIVADQVRQQLGLDQVLLMPEYQPPHVDKKETIPEHHRLKM 81

Query: 68  LERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNA 127
           LE A++GID +++   E++++    T +++    +       Y +IGAD + +L  W   
Sbjct: 82  LELAIEGIDGLVIETIELERKGISYTYDTMKILTEKNPDTDYYFIIGADMVDYLPKWYRI 141

Query: 128 KELLKRVELVVFERIGYEEIQFKGHYHPLKGIDAP---ISSSAIR 169
            EL+  V+ V  +R  Y+     G  +P+  +D P   ISSS +R
Sbjct: 142 DELVDMVQFVGVQRPRYK----VGTSYPVIWVDVPLMDISSSMVR 182
>ref|NP_268649.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
           [Streptococcus pyogenes M1 GAS]
 gb|AAK33370.1| (AE006496) conserved hypothetical protein [Streptococcus pyogenes
           M1 GAS]
          Length = 210

 Score = 75.9 bits (185), Expect = 2e-13
 Identities = 45/163 (27%), Positives = 89/163 (53%), Gaps = 8/163 (4%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNP-FKKPCFLDAQTRFKELE 69
           K++ + GG+F+P+H AHL + +Q  + L   +++++P  + P       +D + R + LE
Sbjct: 24  KQIGILGGNFNPIHNAHLVVADQVRQQLGLDQVLLMPECKPPHVDAKETIDEKHRLRMLE 83

Query: 70  RALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKE 129
            A++ ++ + +   E++++    T +++L+  + +     Y +IGAD + +L  W    E
Sbjct: 84  LAIEDVEGLAIETCELERQGISYTYDTMLYLTEQHPDVDFYFIIGADMVDYLPKWHRIDE 143

Query: 130 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDAP---ISSSAIR 169
           L+K V+ V  +R  Y+     G  +P+  +D P   ISSS IR
Sbjct: 144 LVKLVQFVGVQRPKYK----AGTSYPVIWVDLPLIDISSSMIR 182
>ref|NP_078306.1| (NC_002162) conserved hypothetical [Ureaplasma urealyticum]
 sp|Q9PQ21|NADD_UREPA Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||B82887 conserved hypothetical UU469 [imported] - Ureaplasma urealyticum
 gb|AAF30881.1|AE002143_6 (AE002143) conserved hypothetical [Ureaplasma urealyticum]
          Length = 392

 Score = 74.3 bits (181), Expect = 5e-13
 Identities = 42/142 (29%), Positives = 77/142 (53%), Gaps = 12/142 (8%)

Query: 12  ELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFK-----------KPCFLD 60
           ++ L+ G+FD +H AH+A+ +Q ++L+ + KLI LP+    FK           K     
Sbjct: 2   KIILFCGAFDMVHNAHIAMAKQAMKLVNADKLIFLPSNFKFFKAINKNDNLEYEKTKLTP 61

Query: 61  AQTRFKELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQ-TLYLVIGADCLR 119
              R   L+ A K +  + +SD+E+KQ     TI ++ HF+++Y  +   Y ++G+D L 
Sbjct: 62  GHHRIAMLKIATKNLVNIEVSDYELKQINKSYTINTIEHFKQIYGSEHEYYFIMGSDNLE 121

Query: 120 HLSSWTNAKELLKRVELVVFER 141
               W + + +LK V+++ F+R
Sbjct: 122 RFKQWKDWERILKEVKIICFKR 143
>ref|NP_326166.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis]
 emb|CAC13508.1| (AL445564) conserved hypothetical protein [Mycoplasma pulmonis]
          Length = 366

 Score = 73.9 bits (180), Expect = 7e-13
 Identities = 40/136 (29%), Positives = 77/136 (56%), Gaps = 3/136 (2%)

Query: 7   VLKYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFK-KPCFLDAQTRF 65
           VLK   +A+YGG FDP+HK H  I +  ++     K+I +P ++NP K       ++ R 
Sbjct: 3   VLKNMRIAIYGGCFDPIHKGHSKIAKYAIDNFNLDKVIFVPTWKNPLKTSKDMASSEHRV 62

Query: 66  KELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWT 125
             L+  L+  ++  +SDFEI ++    T +++ +F + Y    ++L+IG+D L++L+ W 
Sbjct: 63  NMLKLVLE--EKQEISDFEINRKCPSYTKDTLEYFLQKYPNDEIFLIIGSDNLKNLNKWK 120

Query: 126 NAKELLKRVELVVFER 141
             + + +  +++V  R
Sbjct: 121 KIEWIAQNAQILVARR 136
>ref|NP_606566.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
           MGAS8232]
 gb|AAL97065.1| (AE009976) conserved hypothetical protein [Streptococcus pyogenes
           MGAS8232]
          Length = 210

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 44/163 (26%), Positives = 88/163 (52%), Gaps = 8/163 (4%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNP-FKKPCFLDAQTRFKELE 69
           K++ + GG+F+P+H AHL + +Q  + L   +++++P  + P       +D + R   LE
Sbjct: 24  KQIGILGGNFNPIHNAHLVVADQVRQQLGLDQVLLMPECKPPHVDAKETIDEKHRLCMLE 83

Query: 70  RALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKE 129
            A++ ++ + +   E++++    T +++++  + +     Y +IGAD + +L  W    E
Sbjct: 84  LAIEDVEGLAIETCELERQGISYTYDTMIYLTEQHPDVDYYFIIGADMVDYLPKWHRIDE 143

Query: 130 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDAP---ISSSAIR 169
           L+K V+ V  +R  Y+     G  +P+  +D P   ISSS IR
Sbjct: 144 LVKLVQFVGVQRPKYK----AGTSYPVIWVDLPLMDISSSMIR 182
>ref|NP_212916.1| (NC_001318) conserved hypothetical protein [Borrelia burgdorferi]
 pir||E70197 conserved hypothetical protein BB0782 - Lyme disease spirochete
 gb|AAC67126.1| (AE001177) conserved hypothetical protein [Borrelia burgdorferi]
          Length = 206

 Score = 70.5 bits (171), Expect = 8e-12
 Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 7/161 (4%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCF--LDAQTRFKELER 70
           +A+ GG+++P+H  H+ + ++   LL   ++I +P   NP  K     +    R   L+ 
Sbjct: 16  IAILGGTYNPVHIGHIFLAKEIEYLLNIDRVIFIPTC-NPAHKLIDENVSVSNRIDMLKL 74

Query: 71  ALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKEL 130
           AL+  D++ + D +I       T++++   +K Y    L+L+IG D  ++  SW + + +
Sbjct: 75  ALENEDKMFIDDCDIINGGITYTVDTISCVKKKYKNDKLFLIIGDDLFQNFDSWKDPQSI 134

Query: 131 LKRVELVVFERIGYEEIQ--FKGHYHPLKGIDAPISSSAIR 169
           +  VELVV  RI  E ++  FK  Y   K I  PISSS IR
Sbjct: 135 VSSVELVVAHRIYKERLKSSFKHIYIDNKII--PISSSEIR 173
>sp|O51723|NADD_BORBU Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
          Length = 193

 Score = 70.5 bits (171), Expect = 8e-12
 Identities = 50/161 (31%), Positives = 85/161 (52%), Gaps = 7/161 (4%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCF--LDAQTRFKELER 70
           +A+ GG+++P+H  H+ + ++   LL   ++I +P   NP  K     +    R   L+ 
Sbjct: 3   IAILGGTYNPVHIGHIFLAKEIEYLLNIDRVIFIPTC-NPAHKLIDENVSVSNRIDMLKL 61

Query: 71  ALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKEL 130
           AL+  D++ + D +I       T++++   +K Y    L+L+IG D  ++  SW + + +
Sbjct: 62  ALENEDKMFIDDCDIINGGITYTVDTISCVKKKYKNDKLFLIIGDDLFQNFDSWKDPQSI 121

Query: 131 LKRVELVVFERIGYEEIQ--FKGHYHPLKGIDAPISSSAIR 169
           +  VELVV  RI  E ++  FK  Y   K I  PISSS IR
Sbjct: 122 VSSVELVVAHRIYKERLKSSFKHIYIDNKII--PISSSEIR 160
>ref|NP_372118.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
           subsp. aureus Mu50]
 ref|NP_374707.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
           subsp. aureus N315]
 ref|NP_646362.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
           subsp. aureus MW2]
 dbj|BAB42686.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus
           subsp. aureus N315]
 dbj|BAB57756.1| (AP003362) conserved hypothetical protein [Staphylococcus aureus
           subsp. aureus Mu50]
 dbj|BAB95410.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus
           subsp. aureus MW2]
          Length = 189

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 39/132 (29%), Positives = 65/132 (48%), Gaps = 1/132 (0%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKK-PCFLDAQTRFKELE 69
           K++ LYGG F+P+H AH+ +  +    L   +   LP++ +P KK   F+D Q R   ++
Sbjct: 2   KKIVLYGGQFNPIHTAHMIVASEVFHELQPDEFYFLPSFMSPLKKHNNFIDVQHRLTMIQ 61

Query: 70  RALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKE 129
             +  +    + D EIK+     T +++  F++ +    LY VIG D    L  W   + 
Sbjct: 62  MIIDELGFGDICDDEIKRGGQSYTYDTIKAFKEQHKDSELYFVIGTDQYNQLEKWYQIEY 121

Query: 130 LLKRVELVVFER 141
           L + V  VV  R
Sbjct: 122 LKEMVTFVVVNR 133
>ref|NP_622570.1| (NC_003869) Nicotinic acid mononucleotide adenylyltransferase
           [Thermoanaerobacter tengcongensis]
 gb|AAM24174.1| (AE013057) Nicotinic acid mononucleotide adenylyltransferase
           [Thermoanaerobacter tengcongensis]
          Length = 209

 Score = 66.6 bits (161), Expect = 1e-10
 Identities = 45/135 (33%), Positives = 66/135 (48%), Gaps = 2/135 (1%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFK-KPCFLDAQTRFKELERA 71
           L + GG+FDP+H  HL   E   +     K+I +PA   P K K    D + R+     A
Sbjct: 7   LGIMGGTFDPIHYGHLVTAEAVRDEFKLDKVIFVPAGNPPHKVKRKVTDKKHRYLMTILA 66

Query: 72  LKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTL-YLVIGADCLRHLSSWTNAKEL 130
                   +S  EI +E    TI+++  F+K+Y  +TL Y + GAD +  + +W NA EL
Sbjct: 67  TITNPFFEVSSIEIDREGYTYTIDTIKEFKKMYGEKTLFYFITGADAVLEILTWKNADEL 126

Query: 131 LKRVELVVFERIGYE 145
           L+    V   R G E
Sbjct: 127 LRLCYFVAATRPGIE 141
>ref|NP_660763.1| (NC_004061) hypothetical 24.5 kD protein in phpB-holA [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
 gb|AAM67974.1| (AE014119) hypothetical 24.5 kD protein in phpB-holA [Buchnera
           aphidicola str. Sg (Schizaphis graminum)]
          Length = 216

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 39/130 (30%), Positives = 67/130 (51%), Gaps = 1/130 (0%)

Query: 14  ALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALK 73
           A++GG+FDP+H  H+   E+    +   K+I+LP Y  P +         R K ++ A+K
Sbjct: 6   AIFGGNFDPIHYGHITSAEKLSREISIKKIILLPNYGPPHRSKTKTSIIDRLKMIKFAIK 65

Query: 74  GIDRVLLSDFEIKQERAVPTIESVLHF-QKLYHPQTLYLVIGADCLRHLSSWTNAKELLK 132
                 +S  E K+     TIE++    +K+ + Q L  +IG D L +L+ W + K++L 
Sbjct: 66  DNKLFTISYLETKKNTTFYTIETLKKIRKKIGYLQPLCFIIGEDNLNNLNIWKDWKKILS 125

Query: 133 RVELVVFERI 142
              L++  RI
Sbjct: 126 LSHLLICPRI 135
>ref|NP_267255.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
 sp|Q9CGJ7|NADD_LACLA Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 gb|AAK05197.1|AE006342_3 (AE006342) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
          Length = 195

 Score = 63.5 bits (153), Expect = 9e-10
 Identities = 47/163 (28%), Positives = 83/163 (50%), Gaps = 8/163 (4%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNP-FKKPCFLDAQTRFKELE 69
           K++ L GG+F+P+H AHL + +Q  + +   K++++P    P   +   + A+ R K LE
Sbjct: 7   KKVGLLGGNFNPIHHAHLMMADQVAQQMNLDKVLLMPENIPPHVDEKETISAKHRVKMLE 66

Query: 70  RALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKE 129
            A+K   R+ L   EI++     + +++    +       Y +IG+D + +L  W    E
Sbjct: 67  LAIKENPRLGLELIEIERGGKSYSYDTLKLLTEANPDTDYYFIIGSDMVEYLPKWYKIDE 126

Query: 130 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDA---PISSSAIR 169
           LLK V  +   R   ++   K  Y P+  +DA   PISS+ +R
Sbjct: 127 LLKLVTFIALRR---KDTISKSPY-PVTWLDAPLLPISSTMLR 165
>ref|NP_252695.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
 sp|Q9HX21|NADD_PSEAE Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||B83147 hypothetical protein PA4006 [imported] - Pseudomonas aeruginosa
           (strain PAO1)
 gb|AAG07393.1|AE004817_17 (AE004817) hypothetical protein [Pseudomonas aeruginosa]
          Length = 214

 Score = 63.5 bits (153), Expect = 9e-10
 Identities = 38/134 (28%), Positives = 71/134 (52%), Gaps = 5/134 (3%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELER 70
           K + L+GG+FDP+H  H+    +  E     +L +LP  + P ++   + A  R   +ER
Sbjct: 3   KRIGLFGGTFDPVHIGHMRSAVEMAEQFALDELRLLPNARPPHRETPQVSAAQRLAMVER 62

Query: 71  ALKGIDRVLLSDFEIKQER---AVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNA 127
           A+ G++R+ +   E+++++    + T+ESV    +L     L+++IG D    L +W   
Sbjct: 63  AVAGVERLTVDPRELQRDKPSYTIDTLESVR--AELAADDQLFMLIGWDAFCGLPTWHRW 120

Query: 128 KELLKRVELVVFER 141
           + LL    +VV +R
Sbjct: 121 EALLDHCHIVVLQR 134
>ref|NP_348406.1| (NC_003030) Predicted nucleotidyltransferase [Clostridium
           acetobutylicum]
 gb|AAK79746.1|AE007687_3 (AE007687) Predicted nucleotidyltransferase [Clostridium
           acetobutylicum]
          Length = 201

 Score = 63.5 bits (153), Expect = 9e-10
 Identities = 35/129 (27%), Positives = 72/129 (55%), Gaps = 1/129 (0%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERAL 72
           + +YGG+F+P   +H+ + +Q L    + KL+ +P   N +KK   + A  R   L+ A 
Sbjct: 7   ILVYGGAFNPPSASHITLAKQLLNYTGAKKLMFVPV-GNQYKKKELIPAYHRINMLQIAC 65

Query: 73  KGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKELLK 132
           +  +R+ ++  ++  +R + TIE++   +K    + +Y +IG D LR + +W + + LL 
Sbjct: 66  ECNNRLEVNTTDVDFKRRLYTIETLEIIKKQNSDKDIYFIIGTDNLRDILNWKHWQRLLT 125

Query: 133 RVELVVFER 141
             +++V +R
Sbjct: 126 EYKIIVMDR 134
>ref|NP_406133.1| (NC_003143) putative nicotinate-nucleotide adenylyltransferase
           [Yersinia pestis]
 emb|CAC92850.1| (AJ414153) putative nicotinate-nucleotide adenylyltransferase
           [Yersinia pestis]
          Length = 220

 Score = 61.6 bits (148), Expect = 4e-09
 Identities = 42/134 (31%), Positives = 66/134 (48%), Gaps = 1/134 (0%)

Query: 14  ALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALK 73
           AL+GG+FDP+H  HL  +E   + +    +I+LP +  P +     +AQ R K +E A+ 
Sbjct: 12  ALFGGTFDPIHYGHLKPVEALAQQVGLQHIILLPNHVPPHRPQPEANAQQRLKMVELAVA 71

Query: 74  GIDRVLLSDFEIKQERAVPTIESVLHFQK-LYHPQTLYLVIGADCLRHLSSWTNAKELLK 132
           G     +   E+ ++    TIE++   +K     Q L  +IG D L  L  W   + LL 
Sbjct: 72  GNPLFSVDSRELLRDSPSFTIETLEALRKERGAEQPLAFIIGQDSLLSLHKWHRWQALLD 131

Query: 133 RVELVVFERIGYEE 146
              L+V  R GY +
Sbjct: 132 VCHLLVCARPGYSQ 145
>ref|NP_275016.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
           MC58]
 sp|P57090|NADD_NEIMB Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||C81015 conserved hypothetical protein NMB2024 [imported] - Neisseria
           meningitidis (group B strain MD58)
 gb|AAF42347.1| (AE002552) conserved hypothetical protein [Neisseria meningitidis
           MC58]
          Length = 201

 Score = 60.8 bits (146), Expect = 6e-09
 Identities = 47/175 (26%), Positives = 78/175 (43%), Gaps = 13/175 (7%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELER 70
           K++ L+GG+FDP+H  HL I     + +    ++ LP      K      A  R   +E 
Sbjct: 2   KKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYHKDAASASAADRLAMVEL 61

Query: 71  ALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKEL 130
           A     R  +SD +I +E A  T ++V  F++ +    L+ ++G+D L  L +W   + L
Sbjct: 62  ATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWWLMGSDSLMKLHTWKKWQML 121

Query: 131 LKRVELVVFERIGYEEIQFKGHYHPLKG----------IDAP---ISSSAIRASL 172
           ++   + V  R G    Q     H   G          + AP   +SS+ IR +L
Sbjct: 122 VRETNIAVAMRQGDSLHQTPRELHAWLGKSLQDGSVRILSAPMHNVSSTEIRRNL 176
>ref|NP_390442.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
 sp|P54455|NADD_BACSU Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||F69951 conserved hypothetical protein yqeJ - Bacillus subtilis
 dbj|BAA12447.1| (D84432) YqeJ [Bacillus subtilis]
 emb|CAB14506.1| (Z99117) similar to hypothetical proteins [Bacillus subtilis]
          Length = 189

 Score = 60.8 bits (146), Expect = 6e-09
 Identities = 43/163 (26%), Positives = 79/163 (48%), Gaps = 8/163 (4%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKK-PCFLDAQTRFKELE 69
           K++ ++GG+FDP H  HL +  + L      ++  +P    P K+   + D+  R + L+
Sbjct: 2   KKIGIFGGTFDPPHNGHLLMANEVLYQAGLDEIWFMPNQIPPHKQNEDYTDSFHRVEMLK 61

Query: 70  RALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKE 129
            A++      L   E+++E    T ++V   ++ Y    L+ +IGAD + +L  W    E
Sbjct: 62  LAIQSNPSFKLELVEMEREGPSYTFDTVSLLKQRYPNDQLFFIIGADMIEYLPKWYKLDE 121

Query: 130 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDAP---ISSSAIR 169
           LL  ++ +  +R G+         +PL   D P   +SS+ IR
Sbjct: 122 LLNLIQFIGVKRPGFH----VETPYPLLFADVPEFEVSSTMIR 160
>ref|NP_283243.1| (NC_003116) hypothetical protein NMA0416 [Neisseria meningitidis
           Z2491]
 sp|P57089|NADD_NEIMA Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||C81958 hypothetical protein NMA0416 [imported] - Neisseria meningitidis
           (group A strain Z2491)
 emb|CAB83715.1| (AL162753) hypothetical protein NMA0416 [Neisseria meningitidis
           Z2491]
          Length = 197

 Score = 60.5 bits (145), Expect = 8e-09
 Identities = 37/133 (27%), Positives = 64/133 (47%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELER 70
           K++ L+GG+FDP+H  HL I     + +    ++ LP      K      A  R   +E 
Sbjct: 2   KKIGLFGGTFDPIHNGHLHIARAFADEIGLDAVVFLPTGGPYHKDAASASAADRLAMVEL 61

Query: 71  ALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKEL 130
           A     R  +SD +I +E A  T ++V  F++ +    L+ ++G+D L  L +W   + L
Sbjct: 62  ATAEDARFAVSDCDIVREGATYTFDTVQIFRQQFPSAQLWWLMGSDSLMKLHTWKKWQML 121

Query: 131 LKRVELVVFERIG 143
           ++   + V  R G
Sbjct: 122 VRETNIAVAMRQG 134
>ref|NP_240258.1| (NC_002528) hypothetical protein [Buchnera sp. APS]
 sp|P57521|NADD_BUCAI Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 dbj|BAB13144.1| (AP001119) hypothetical protein [Buchnera sp. APS]
          Length = 214

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 35/132 (26%), Positives = 66/132 (49%), Gaps = 1/132 (0%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELER 70
           K  A++GG+FDP+H  H+ + E+  + +   K+I+LP    P +         + K ++ 
Sbjct: 3   KLCAIFGGNFDPIHYGHINLAEKLAKDISIKKIILLPNNYPPHRNKTQTSISDKIKMIKL 62

Query: 71  ALKGIDRVLLSDFEIKQERAVPTIESVLHF-QKLYHPQTLYLVIGADCLRHLSSWTNAKE 129
           A+       +S  E K+     TI+++    +K+ H + L  +IG D L+    W N +E
Sbjct: 63  AIHNNPLFEISYLETKKNNIFYTIDTLKKIRKKISHLEPLCFIIGEDNLQTFYLWKNWRE 122

Query: 130 LLKRVELVVFER 141
           +L    L+++ R
Sbjct: 123 ILLYSHLLIYPR 134
>ref|NP_242192.1| (NC_002570) nicotinate-nucleotide adenylyltransferase [Bacillus
           halodurans]
 sp|Q9KD91|NADD_BACHD Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 dbj|BAB05045.1| (AP001511) nicotinate-nucleotide adenylyltransferase [Bacillus
           halodurans]
          Length = 207

 Score = 60.1 bits (144), Expect = 1e-08
 Identities = 41/162 (25%), Positives = 78/162 (47%), Gaps = 3/162 (1%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFK-KPCFLDAQTRFKELE 69
           K + L GG+FDP H  HL + ++ +      ++  +P    P K +        R   ++
Sbjct: 2   KRIGLLGGTFDPPHIGHLLLAQEAIHCADLDEVWFVPVGIPPHKEREEIASNDDRLAMIK 61

Query: 70  RALKGIDRVL-LSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAK 128
           RA+KG + +  +   E+++E    TI++V    K +     + +IG D ++ L +W    
Sbjct: 62  RAIKGKETLFNICTIELEREGKSYTIDTVRTLTKKHPDVRFFFIIGGDMVKSLPTWKGID 121

Query: 129 ELLKRVELVVFERIG-YEEIQFKGHYHPLKGIDAPISSSAIR 169
           ELL  V  + F+R G   +  ++     ++G +  +SS+ IR
Sbjct: 122 ELLATVTFIGFKRPGVLLDSPYQDQLMLVEGPEVNVSSTMIR 163
>ref|NP_520314.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
 emb|CAD15900.1| (AL646068) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
          Length = 231

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 5/138 (3%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERAL 72
           L L GG+FDP H  HLA+ E  +  L   +L+ +P   +  K      A  R    E A 
Sbjct: 12  LGLLGGTFDPPHVGHLALAELCIAQLDLDELVWIPTGMSWQKAADITPAPLRLAMTELAA 71

Query: 73  K----GIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQT-LYLVIGADCLRHLSSWTNA 127
           +    G  RV +S  E+++     TI++V   +  Y P T +  ++GAD L  L +W   
Sbjct: 72  RAVRPGRARVRVSTMEVERSGPSYTIDTVRELRGAYGPDTSMAWLMGADQLVGLDTWHGW 131

Query: 128 KELLKRVELVVFERIGYE 145
           ++L + V L V  R G++
Sbjct: 132 QDLFEYVHLCVATRPGFD 149
>ref|NP_658363.1| (NC_003995) Cytidylyltransf, Cytidylyltransferase [Bacillus
           anthracis A2012] [Bacillus anthracis str. A2012]
          Length = 189

 Score = 58.2 bits (139), Expect = 4e-08
 Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 8/163 (4%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDA-QTRFKELE 69
           +++ + GG+FDP H  HL I  +    L   ++  LP    P K+   + + ++R + LE
Sbjct: 2   RKIGIIGGTFDPPHYGHLLIANEVYHALNLEEVWFLPNQIPPHKQGRDITSVESRLQMLE 61

Query: 70  RALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKE 129
            A +  +   +   E+ ++    T +++L   K Y     + +IG D + +L  W N + 
Sbjct: 62  LATEAEEHFSICLEELSRKGPSYTYDTMLQLTKKYPDVQFHFIIGGDMVEYLPKWYNIEA 121

Query: 130 LLKRVELVVFERIGYEEIQFKGHYHPLKGIDAP---ISSSAIR 169
           LL  V  V   R GY   + +  Y P+  ++ P   +SSS +R
Sbjct: 122 LLDLVTFVGVARPGY---KLRTPY-PITTVEIPEFAVSSSLLR 160
>ref|NP_660922.1| (NC_002932) nicotinate-nucleotide adenyltransferase, putative
           [Chlorobium tepidum TLS]
 gb|AAM71264.1| (AE012781) nicotinate-nucleotide adenyltransferase, putative
           [Chlorobium tepidum TLS]
          Length = 195

 Score = 57.4 bits (137), Expect = 7e-08
 Identities = 49/165 (29%), Positives = 74/165 (44%), Gaps = 11/165 (6%)

Query: 14  ALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLD-----AQTRFKEL 68
           A++GGSFDP H  HLA+     EL    +LIV  + +NPFK           A  R    
Sbjct: 4   AVFGGSFDPPHNGHLALSLFARELAGLDRLIVSVS-KNPFKAAADASDDDRSAMARLLVA 62

Query: 69  ERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAK 128
           E  + G+   + S +E++Q     TI+ + H ++      L L++G D    +  W  A 
Sbjct: 63  EINVAGVFAEI-SGWELQQSGPSYTIDLLRHVEERCPGDELVLLVGEDSYLQMPQWKFAS 121

Query: 129 ELLKRVELVVFERIGYEEIQFKGHYHPLKGI----DAPISSSAIR 169
           E+LK   + VF R   +          L  I    D P+S++ IR
Sbjct: 122 EILKHCTIAVFGRSDIDAADAPPSDPLLPAIHYDFDMPVSATKIR 166
>ref|NP_455221.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
           subsp. enterica serovar Typhi]
 emb|CAD05122.1| (AL627267) conserved hypothetical protein [Salmonella enterica
           subsp. enterica serovar Typhi]
          Length = 213

 Score = 57.0 bits (136), Expect = 9e-08
 Identities = 35/132 (26%), Positives = 65/132 (48%), Gaps = 1/132 (0%)

Query: 14  ALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALK 73
           AL+GG+FDP+H  HL  +E    L+  +++I++P    P +      +  R   LE A+ 
Sbjct: 6   ALFGGTFDPVHYGHLKPVETLANLIGLSRVIIMPNNVPPHRPQPEASSAQRKYMLELAIA 65

Query: 74  GIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQT-LYLVIGADCLRHLSSWTNAKELLK 132
                 L + E+++     T +++  +++   P+  L  +IG D L +  +W +   +L 
Sbjct: 66  DKPLFTLGERELQRNAPSYTAQTLKAWREEQGPEAPLAFIIGQDSLLNFPTWHDYDTILD 125

Query: 133 RVELVVFERIGY 144
              L+V  R GY
Sbjct: 126 NTHLIVCRRPGY 137
>ref|NP_459637.1| (NC_003197) putative Nicotinic acid mononucleotide
           adenylyltransferase [Salmonella typhimurium LT2]
 gb|AAL19596.1| (AE008725) putative Nicotinic acid mononucleotide
           adenylyltransferase [Salmonella typhimurium LT2]
          Length = 213

 Score = 57.0 bits (136), Expect = 9e-08
 Identities = 35/132 (26%), Positives = 65/132 (48%), Gaps = 1/132 (0%)

Query: 14  ALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALK 73
           AL+GG+FDP+H  HL  +E    L+  +++I++P    P +      +  R   LE A+ 
Sbjct: 6   ALFGGTFDPVHYGHLKPVETLANLIGLSRVIIMPNNVPPHRPQPEASSAQRKYMLELAIA 65

Query: 74  GIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQT-LYLVIGADCLRHLSSWTNAKELLK 132
                 L + E+++     T +++  +++   P+  L  +IG D L +  +W +   +L 
Sbjct: 66  DKPLFTLDERELQRNAPSYTAQTLKAWREEQGPEAPLAFIIGQDSLLNFPTWHDYDTILD 125

Query: 133 RVELVVFERIGY 144
              L+V  R GY
Sbjct: 126 NTHLIVCRRPGY 137
>ref|NP_489103.1| (NC_003272) nicotinate-nucleotide adenylyltransferase [Nostoc sp.
           PCC 7120]
 dbj|BAB76762.1| (AP003598) nicotinate-nucleotide adenylyltransferase [Nostoc sp.
           PCC 7120]
          Length = 208

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 37/138 (26%), Positives = 63/138 (44%), Gaps = 3/138 (2%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELER 70
           + LA++GG+FDP+H  HL I E  L+ +P  K+I +P+   P KK      + R   L+ 
Sbjct: 2   QHLAVFGGTFDPIHWGHLLIAEAALQQIPIEKVIWVPSLNPPHKKASAF--RHRLAMLQL 59

Query: 71  ALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKEL 130
           A +      +S  E  +      I ++      +     Y ++G D  + L  W   +EL
Sbjct: 60  ATQDNPAFTVSSVEKNRSGVSYAINTLTDLSVCFPNTHWYWIVGLDTFQTLPRWYRGQEL 119

Query: 131 LKRVELVVFER-IGYEEI 147
               + ++  R +G E I
Sbjct: 120 APMCDWLIAPRLVGGENI 137
>ref|NP_266381.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
 gb|AAK04323.1|AE006260_6 (AE006260) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
          Length = 199

 Score = 56.2 bits (134), Expect = 2e-07
 Identities = 42/167 (25%), Positives = 72/167 (42%), Gaps = 16/167 (9%)

Query: 9   KYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKEL 68
           K + + L+ G+F+P+H  HL I +Q  + L   K++ LP +         L A       
Sbjct: 21  KRRAIGLFWGNFNPVHVGHLTIADQVRQELNLEKVVFLPEHNTDGHVAAMLTA------- 73

Query: 69  ERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAK 128
             A++    + +    +K +      ++VL   +       Y +IG D +  L+ W +  
Sbjct: 74  --AIEDCPGLEVDACRLKAKDGADIYQTVLELHEENPDCDFYFIIGGDMIYGLAHWAHID 131

Query: 129 ELLKRVELVVFERIGYEEIQFKGHYHPLKGIDAP---ISSSAIRASL 172
           ELL+ V+ V   R  Y      G  +P+  +D P   IS + IR  L
Sbjct: 132 ELLELVQFVGIRRPRYR----AGTSYPIMWVDVPMMDISGNLIREQL 174
>ref|NP_286365.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
           EDL933]
 ref|NP_308704.1| (NC_002695) nicotinic acid mononucleotide adenylyltransferase
           [Escherichia coli O157:H7]
 gb|AAG54973.1|AE005243_2 (AE005243) orf, hypothetical protein [Escherichia coli O157:H7
           EDL933]
 dbj|BAB34100.1| (AP002552) nicotinic acid mononucleotide adenylyltransferase
           [Escherichia coli O157:H7]
          Length = 213

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 14  ALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALK 73
           AL+GG+FDP+H  HL  +E    L+   ++ ++P    P +     ++  R   LE A+ 
Sbjct: 6   ALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSVQRKHMLELAIA 65

Query: 74  GIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQT-LYLVIGADCLRHLSSWTNAKELLK 132
                 L + E+K+     T +++  +++   P   L  +IG D L    +W   + +L 
Sbjct: 66  DKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILD 125

Query: 133 RVELVVFERIGY 144
              L+V  R GY
Sbjct: 126 NAHLIVCRRPGY 137
>ref|NP_415172.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
 sp|P52085|NADD_ECOLI Nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||E64798 hypothetical protein b0639 - Escherichia coli
 gb|AAA64852.1| (U23163) OrfUU [Escherichia coli]
 gb|AAB40840.1| (U82598) orfUU; hypothetical protein [Escherichia coli]
 gb|AAC73740.1| (AE000168) orf, hypothetical protein [Escherichia coli K12]
 dbj|BAA35286.1| (D90704) Hypothetical 24.5 kd protein in phpB-holA intergenic
           region (orfUU). [Escherichia coli]
          Length = 213

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 1/132 (0%)

Query: 14  ALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALK 73
           AL+GG+FDP+H  HL  +E    L+   ++ ++P    P +     ++  R   LE A+ 
Sbjct: 6   ALFGGTFDPVHYGHLKPVETLANLIGLTRVTIIPNNVPPHRPQPEANSVQRKHMLELAIA 65

Query: 74  GIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQT-LYLVIGADCLRHLSSWTNAKELLK 132
                 L + E+K+     T +++  +++   P   L  +IG D L    +W   + +L 
Sbjct: 66  DKPLFTLDERELKRNAPSYTAQTLKEWRQEQGPDVPLAFIIGQDSLLTFPTWYEYETILD 125

Query: 133 RVELVVFERIGY 144
              L+V  R GY
Sbjct: 126 NAHLIVCRRPGY 137
>ref|NP_219178.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
 sp|O83723|NADD_TREPA Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||B71286 conserved hypothetical protein TP0741 - syphilis spirochete
 gb|AAC65710.1| (AE001246) conserved hypothetical protein [Treponema pallidum]
          Length = 204

 Score = 55.8 bits (133), Expect = 2e-07
 Identities = 47/177 (26%), Positives = 77/177 (42%), Gaps = 16/177 (9%)

Query: 12  ELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFK-KPCFLDAQTRFKELER 70
           +LAL+GGS+DP+H  HL + +         +++ +P + +PFK K     A  R + L  
Sbjct: 2   KLALFGGSYDPVHLGHLLLADAVHRHAGYDRVLFVPTFVSPFKEKEGSASAHDRVRMLHL 61

Query: 71  ALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQ---TLYLVIGADCLRHLSSWTNA 127
           A+       + + EI++     T E+V H ++ Y  Q    L LV+G D  R +  W   
Sbjct: 62  AIGTTPYFSVEECEIRRGGISYTAETVQHVREKYGAQLEGKLALVLGEDAARSVPHWHAF 121

Query: 128 KELLKRVELVV------------FERIGYEEIQFKGHYHPLKGIDAPISSSAIRASL 172
                 V+ VV             ER       F   +   + +  PISS+ IR ++
Sbjct: 122 DSWSTHVDFVVGARPVTSGDGGNVERATRTLQSFPFPWVSAENVALPISSTYIRTAI 178
>ref|NP_440593.1| (NC_000911) unknown protein [Synechocystis sp. PCC 6803]
 sp|P73246|NADD_SYNY3 Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||S75359 hypothetical protein sll1916 - Synechocystis sp. (strain PCC 6803)
 dbj|BAA17273.1| (D90904) ORF_ID:sll1916~unknown protein [Synechocystis sp. PCC
           6803]
          Length = 200

 Score = 53.9 bits (128), Expect = 7e-07
 Identities = 56/181 (30%), Positives = 83/181 (44%), Gaps = 29/181 (16%)

Query: 12  ELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKK---------PCFLDAQ 62
           ++AL+G S DP   AH AI+   + L      + + A  NPFK+             D Q
Sbjct: 2   KIALFGTSADPPTLAHRAIL---IWLAQHFDQVAVWAADNPFKQGPNPETGHWASLGDRQ 58

Query: 63  TRFKELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLY-LVIGADCLRHL 121
              K L   ++  D   +  +E   +R   ++ S+   Q+ +  +  Y LV+GAD +R +
Sbjct: 59  AMLKLLVEDVQK-DYATVQIWEDLSDRR--SLISLQRAQQRWGLEPDYALVVGADLIRQI 115

Query: 122 SSWTNAKELLKRVELVVFERIGY--------EEIQFKGHYHPL-----KGIDAPISSSAI 168
           S W   KELL  V+LV+F R GY        +  Q  GHY  +     + I  PISSS  
Sbjct: 116 SQWYAVKELLPAVQLVIFPRPGYGINQADLDKLAQLGGHYQLVNQGDDQAITPPISSSIY 175

Query: 169 R 169
           R
Sbjct: 176 R 176
>ref|NP_216937.1| (NC_000962) hypothetical protein Rv2421c [Mycobacterium
           tuberculosis H37Rv]
 ref|NP_336977.1| (NC_002755) conserved hypothetical protein [Mycobacterium
           tuberculosis CDC1551]
 sp|O86328|NADD_MYCTU Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||H70685 hypothetical protein Rv2421c - Mycobacterium tuberculosis  (strain
           H37RV)
 emb|CAB03753.1| (Z81368) hypothetical protein Rv2421c [Mycobacterium tuberculosis
           H37Rv]
 gb|AAK46791.1| (AE007087) conserved hypothetical protein [Mycobacterium
           tuberculosis CDC1551]
          Length = 211

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 35/129 (27%), Positives = 56/129 (43%)

Query: 17  GGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALKGID 76
           GG+FDP+H  HL    +  +L    +++ +P+ Q   K      A+ R+     A     
Sbjct: 2   GGTFDPIHYGHLVAASEVADLFDLDEVVFVPSGQPWQKGRQVSAAEHRYLMTVIATASNP 61

Query: 77  RVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKELLKRVEL 136
           R  +S  +I +     T +++     L+    LY   GAD L  + SW   +EL +    
Sbjct: 62  RFSVSRVDIDRGGPTYTKDTLADLHALHPDSELYFTTGADALASIMSWQGWEELFELARF 121

Query: 137 VVFERIGYE 145
           V   R GYE
Sbjct: 122 VGVSRPGYE 130
>ref|NP_465013.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes
           EGD-e]
 emb|CAC99566.1| (AL591979) similar to unknown proteins [Listeria monocytogenes]
          Length = 188

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 53/171 (30%), Positives = 80/171 (45%), Gaps = 19/171 (11%)

Query: 8   LKYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKK-PCFLDAQTRFK 66
           +K+K + + GG+FDP H AHL + E+  + L   K++ LP    P K          R +
Sbjct: 1   MKHK-VGILGGTFDPPHLAHLHMAEEAKKQLELEKILFLPNKIPPHKHISGMASINERVE 59

Query: 67  ELERALKGIDRVLLSDFEIKQERAVPTIES----VLHFQKLYHPQT-LYLVIGADCLRHL 121
            L+  ++GID      FEI     + T +S     +    +  P T  Y +IG D + +L
Sbjct: 60  MLQLMIEGID-----SFEIDTRELMRTGKSYTYDTMRDMIIEQPDTDFYFIIGGDMVEYL 114

Query: 122 SSWTNAKELLKRVELVVFERIGYEEIQFKGHYHPLKGIDAP---ISSSAIR 169
             W +  +L+K V  V   R  Y   Q +  Y  +K ID P   ISS+ IR
Sbjct: 115 PKWYHIDDLVKMVTFVGVNRPLY---QPEVPYDVVK-IDMPKTTISSTEIR 161
>pir||S73826 MG240 homolog F10_orf291 - Mycoplasma pneumoniae (strain ATCC
           29342)
          Length = 291

 Score = 53.1 bits (126), Expect = 1e-06
 Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 1/77 (1%)

Query: 68  LERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNA 127
           L  ALK + ++ +S+F+IK +    +  +V HF++ +    LY +IG+D L  L+ W N 
Sbjct: 2   LRVALKALPQMAVSNFDIKAQNGF-SFNTVQHFKQRFPNAELYFLIGSDKLSELAKWHNI 60

Query: 128 KELLKRVELVVFERIGY 144
           ++L K    V +ER GY
Sbjct: 61  EQLQKLCRFVCYERFGY 77
>dbj|BAB99745.1| (AP005281) Nicotinic acid mononucleotide adenylyltransferase
           [Corynebacterium glutamicum ATCC 13032]
          Length = 226

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 35/142 (24%), Positives = 64/142 (44%), Gaps = 3/142 (2%)

Query: 6   SVLKYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPC--FLDAQT 63
           +V +   + + GG+FDP+H  HL    +  +      ++ +P  Q P++K       A+ 
Sbjct: 12  TVKRRARIGIMGGTFDPIHNGHLVAGSEVADRFDLDLVVYVPTGQ-PWQKANKKVSPAED 70

Query: 64  RFKELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSS 123
           R+     A     R ++S  +I +     TI+++    K Y    LY + GAD L  + +
Sbjct: 71  RYLMTVIATASNPRFMVSRVDIDRGGDTYTIDTLQDLSKQYPDAQLYFITGADALAQIVT 130

Query: 124 WTNAKELLKRVELVVFERIGYE 145
           W + ++  +    V   R GYE
Sbjct: 131 WRDWEKTFELAHFVGVTRPGYE 152
>ref|NP_601553.1| (NC_003450) COG1057:Nicotinic acid mononucleotide
           adenylyltransferase [Corynebacterium glutamicum]
          Length = 218

 Score = 52.0 bits (123), Expect = 3e-06
 Identities = 35/142 (24%), Positives = 64/142 (44%), Gaps = 3/142 (2%)

Query: 6   SVLKYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPC--FLDAQT 63
           +V +   + + GG+FDP+H  HL    +  +      ++ +P  Q P++K       A+ 
Sbjct: 4   TVKRRARIGIMGGTFDPIHNGHLVAGSEVADRFDLDLVVYVPTGQ-PWQKANKKVSPAED 62

Query: 64  RFKELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSS 123
           R+     A     R ++S  +I +     TI+++    K Y    LY + GAD L  + +
Sbjct: 63  RYLMTVIATASNPRFMVSRVDIDRGGDTYTIDTLQDLSKQYPDAQLYFITGADALAQIVT 122

Query: 124 WTNAKELLKRVELVVFERIGYE 145
           W + ++  +    V   R GYE
Sbjct: 123 WRDWEKTFELAHFVGVTRPGYE 144
>ref|NP_072906.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium]
 sp|P47482|Y240_MYCGE Hypothetical protein MG240
 pir||E64226 hypothetical protein homolog MG240 - Mycoplasma genitalium
 gb|AAC71461.1| (U39703) conserved hypothetical protein [Mycoplasma genitalium]
          Length = 292

 Score = 50.8 bits (120), Expect = 6e-06
 Identities = 26/77 (33%), Positives = 44/77 (56%), Gaps = 1/77 (1%)

Query: 68  LERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNA 127
           L+ A+K ++  L+S+F+IK + A  +I +V HF+  Y    +Y +IG+D L  L  W + 
Sbjct: 2   LKLAIKSVNNALVSNFDIKTKNAF-SINTVNHFKSCYPTSEIYFLIGSDKLNELEKWDHI 60

Query: 128 KELLKRVELVVFERIGY 144
           ++L      V +ER  Y
Sbjct: 61  QQLKDLCTFVCYERKPY 77
>ref|NP_637964.1| (NC_003902) nicotinate-nucleotide adenylyltransferase [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
 gb|AAM41888.1| (AE012373) nicotinate-nucleotide adenylyltransferase [Xanthomonas
           campestris pv. campestris str. ATCC 33913]
          Length = 299

 Score = 50.8 bits (120), Expect = 6e-06
 Identities = 44/159 (27%), Positives = 74/159 (45%), Gaps = 16/159 (10%)

Query: 16  YGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALKGI 75
           YGG+FDP+H+ HLAI     + L  A++ ++PA   P +      A  R + LE AL  +
Sbjct: 84  YGGTFDPIHRGHLAIACAARDAL-GAQVHLVPAADPPHRPAPGATAAQRTRMLELALADL 142

Query: 76  DRVLLSDFEIKQ--ERAVP--TIESVLHFQKLYHP-QTLYLVIGADCLRHLSSWTNAKEL 130
             +LL   E+++  +   P  T++++   +    P + +  ++GAD    L  W    EL
Sbjct: 143 PGLLLDTREVRRAAQGGAPSYTVDTLHEVRAQLGPAKPIAWLLGADAFVGLPGWHEWTEL 202

Query: 131 LKRVELVVFERIGYEEIQFKGHYHPLKGIDAPISSSAIR 169
                LV+  R G            L   DAP+ + A++
Sbjct: 203 FGLAHLVIAARPG----------TALDLADAPVLAQAVQ 231
>ref|NP_302026.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
 sp|Q9CBZ8|NADD_MYCLE Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 emb|CAC30404.1| (AL583922) conserved hypothetical protein [Mycobacterium leprae]
          Length = 214

 Score = 50.4 bits (119), Expect = 8e-06
 Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 2/130 (1%)

Query: 17  GGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDA-QTRFKELERALKGI 75
           GG+FDP+H  HL    +   +    +++ +P+ Q P++K   + A + R+     A    
Sbjct: 2   GGTFDPIHYGHLVAASEVAHMFELDEVMFVPSGQ-PWQKGRHVSAAEDRYLMTVIATASN 60

Query: 76  DRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKELLKRVE 135
            R  +S  +I +     T ++V     L     LY + GAD L  + SW    EL     
Sbjct: 61  PRFSVSRVDIDRTGPTYTRDTVHDLHALNPDSELYFITGADALASILSWQGWDELFDLAR 120

Query: 136 LVVFERIGYE 145
            V   R GYE
Sbjct: 121 FVGVSRPGYE 130
>pir||S48587 hypothetical protein - Mycoplasma capricolum (fragment)
          Length = 151

 Score = 50.1 bits (118), Expect = 1e-05
 Identities = 25/59 (42%), Positives = 36/59 (60%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELE 69
           K++AL+GGSFDP+H  H+ II+   E L   ++ ++PAY NPFK       + R   LE
Sbjct: 84  KKIALFGGSFDPIHTDHVNIIKTCYEKLNFDEVWLIPAYLNPFKTKQNSSIKDRLNMLE 142
>ref|NP_470859.1| (NC_003212) similar to unknown proteins [Listeria innocua]
 emb|CAC96754.1| (AL596168) similar to unknown proteins [Listeria innocua]
          Length = 188

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 35/140 (25%), Positives = 66/140 (47%), Gaps = 2/140 (1%)

Query: 8   LKYKELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDA-QTRFK 66
           +K+K + + GG+FDP H AHL + E+    L   K++ LP    P K+   + + + R +
Sbjct: 1   MKHK-VGILGGTFDPPHLAHLHMAEEAKAQLGLEKILFLPNKVPPHKQISGMASNEERVE 59

Query: 67  ELERALKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTN 126
            L+  ++  D   +   E+ +     T +++            Y +IG D + +L  W +
Sbjct: 60  MLQLMIEDRDSFEIDTRELMRTGKSYTYDTMRDMISEQPNTDFYFIIGGDMVEYLPKWYH 119

Query: 127 AKELLKRVELVVFERIGYEE 146
             +L+K V  V   R  Y++
Sbjct: 120 IDDLVKMVTFVGVNRPLYQK 139
>ref|NP_299458.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
           9a5c]
 sp|Q9PBG5|NADD_XYLFA Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
 pir||H82590 conserved hypothetical protein XF2179 [imported] - Xylella
           fastidiosa (strain 9a5c)
 gb|AAF84978.1|AE004031_10 (AE004031) conserved hypothetical protein [Xylella fastidiosa 9a5c]
          Length = 222

 Score = 48.1 bits (113), Expect = 4e-05
 Identities = 35/133 (26%), Positives = 64/133 (47%), Gaps = 6/133 (4%)

Query: 16  YGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALKGI 75
           YGG+FDP+H  HLAI       L  A + ++P+   P +      +  R + L+ A+   
Sbjct: 8   YGGTFDPVHVGHLAIARAAHAAL-QAPIALIPSADPPHRPTPGSSSMDRLRMLQLAVSKE 66

Query: 76  DRVLLSDFEI----KQERAVPTIESVLHFQKLYHPQT-LYLVIGADCLRHLSSWTNAKEL 130
             +     E+    +Q R+  T++++   +    P+T +  ++GAD   +LS+W + + L
Sbjct: 67  PGLSADPRELQRAARQNRSSYTVDTLTEVRSELGPKTSIIWLLGADAFVNLSNWKDWQML 126

Query: 131 LKRVELVVFERIG 143
                LV+  R G
Sbjct: 127 PALTHLVIANRPG 139
>ref|NP_626817.1| (NC_003888) putative nicotinate-nucleotide adenylyltransferase
           [Streptomyces coelicolor A3(2)]
 emb|CAB66257.1| (AL136518) putative nicotinate-nucleotide adenylyltransferase
           [Streptomyces coelicolor A3(2)]
          Length = 238

 Score = 47.8 bits (112), Expect = 5e-05
 Identities = 30/136 (22%), Positives = 61/136 (44%), Gaps = 3/136 (2%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELER 70
           + L + GG+FDP+H  HL    +        +++ +P  Q P++K     +    + L  
Sbjct: 46  RRLGVMGGTFDPIHHGHLVAASEVAAQFQLDEVVFVPTGQ-PWQKSHRAVSAAEDRYLMT 104

Query: 71  ALKGIDRVLLSDFEIKQERAVPT--IESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAK 128
            +  ++    S   I  +R  PT  ++++   + L     L+ + GAD L  + +W +++
Sbjct: 105 VVATVENPQFSVSRIDIDRGGPTYTVDTLRDLRALNPDADLFFITGADALAQILTWRDSE 164

Query: 129 ELLKRVELVVFERIGY 144
           EL      +   R G+
Sbjct: 165 ELFSLAHFIGVTRPGH 180
>sp|Q9RDK7|NADD_STRCO Probable nicotinate-nucleotide adenylyltransferase (Deamido-NAD(+)
           pyrophosphorylase) (Deamido-NAD(+) diphosphorylase)
           (Nicotinate mononucleotide adenylyltransferase) (NAMN
           adenylyltransferase)
          Length = 188

 Score = 45.4 bits (106), Expect = 3e-04
 Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 3/130 (2%)

Query: 17  GGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALKGID 76
           GG+FDP+H  HL    +        +++ +P  Q P++K     +    + L   +  ++
Sbjct: 2   GGTFDPIHHGHLVAASEVAAQFQLDEVVFVPTGQ-PWQKSHRAVSAAEDRYLMTVVATVE 60

Query: 77  RVLLSDFEIKQERAVPT--IESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKELLKRV 134
               S   I  +R  PT  ++++   + L     L+ + GAD L  + +W +++EL    
Sbjct: 61  NPQFSVSRIDIDRGGPTYTVDTLRDLRALNPDADLFFITGADALAQILTWRDSEELFSLA 120

Query: 135 ELVVFERIGY 144
             +   R G+
Sbjct: 121 HFIGVTRPGH 130
>ref|NP_422225.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
           CB15]
 gb|AAK25393.1| (AE006003) conserved hypothetical protein [Caulobacter crescentus
           CB15]
          Length = 216

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 34/130 (26%), Positives = 58/130 (44%), Gaps = 3/130 (2%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPC-FLDAQTRFKELERA 71
           + L+GGSF+P H+ H  + E  +  L   ++I L + QNP K          R     R 
Sbjct: 31  VGLFGGSFNPAHEGHAHVAETAMRRLELDRVIWLVSPQNPLKPTHETRPVAERMANARRW 90

Query: 72  LKGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSWTNAKELL 131
            +G   +++SD E +      TI+++   +  Y       V+GAD L     W    +++
Sbjct: 91  ARG-SGMIVSDAETRLGSQY-TIDTLRVLRARYPGVKFVWVMGADSLATFHRWRGWTQIM 148

Query: 132 KRVELVVFER 141
           + V + V  R
Sbjct: 149 REVPVAVISR 158
>ref|NP_486523.1| (NC_003272) nicotinate-nucleotide adenylyltransferase [Nostoc sp.
           PCC 7120]
 dbj|BAB74182.1| (AP003589) nicotinate-nucleotide adenylyltransferase [Nostoc sp.
           PCC 7120]
          Length = 200

 Score = 45.1 bits (105), Expect = 3e-04
 Identities = 40/143 (27%), Positives = 67/143 (45%), Gaps = 21/143 (14%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELER 70
           K++AL+G S DP    H  I+    E       + + A  NPFK       QT  +    
Sbjct: 2   KKIALFGTSADPPTAGHQIILRWLSERYD---WVAVWAADNPFKSH-----QTLLEHRAA 53

Query: 71  ALKGIDRVLLSDFEIKQER--------AVPTIESVLHFQKLYHPQTLY-LVIGADCLRHL 121
            L    R+L++D E  ++         +  T+E++   +  +   T + L+IG+D L  L
Sbjct: 54  ML----RLLIADIEAPRQNIALEQDLSSFRTLETLEKAKLRWGANTEFTLIIGSDLLSQL 109

Query: 122 SSWTNAKELLKRVELVVFERIGY 144
             W   +ELL++V+L++  R GY
Sbjct: 110 PRWYRVEELLQQVQLLIVPRPGY 132
>ref|NP_246242.1| (NC_002663) KdtB [Pasteurella multocida]
 sp|Q9CLD4|COAD_PASMU Phosphopantetheine adenylyltransferase (Pantetheine-phosphate
          adenylyltransferase) (PPAT) (Dephospho-CoA
          pyrophosphorylase)
 gb|AAK03388.1| (AE006169) KdtB [Pasteurella multocida]
          Length = 158

 Score = 44.7 bits (104), Expect = 5e-04
 Identities = 27/85 (31%), Positives = 47/85 (54%), Gaps = 9/85 (10%)

Query: 15 LYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALKG 74
          +Y G+FDP+   HL II++T  L P+   +++    NP KKP F D  TR + +++A+  
Sbjct: 5  IYPGTFDPITNGHLDIIQRTARLFPN---VLVAVASNPNKKPLF-DLATRVELVKQAVAH 60

Query: 75 IDRVLLSDF-----EIKQERAVPTI 94
          +  V +  F     ++ +ER +  I
Sbjct: 61 LPNVTVVGFLDLLADVVKERNITAI 85
>ref|NP_232607.1| (NC_002506) conserved hypothetical protein [Vibrio cholerae]
 pir||F82486 conserved hypothetical protein VCA0208 [imported] - Vibrio cholerae
           (group O1 strain N16961)
 gb|AAF96120.1| (AE004361) conserved hypothetical protein [Vibrio cholerae]
          Length = 175

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 39/129 (30%), Positives = 64/129 (49%), Gaps = 11/129 (8%)

Query: 11  KELALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVL-PAYQNPFKKPCFLDAQTRFKELE 69
           K++A++G +F+P    H +II+     L    LI+L P+  + + K   LD + R + ++
Sbjct: 2   KKIAVFGSAFNPPTLGHKSIIDS----LGHFDLILLVPSIAHAWGKT-MLDYELRSQLVD 56

Query: 70  RALK--GIDRVLLSDFE---IKQERAVPTIESVLHFQKLYHPQTLYLVIGADCLRHLSSW 124
           + ++  G ++V  SD E        AV T   +   Q LY    L  VIG D L H   +
Sbjct: 57  QFIQDIGSNKVQRSDVEQALYAPPEAVTTYAVLTRLQALYPEDELTFVIGPDNLLHFGKF 116

Query: 125 TNAKELLKR 133
             A E+L+R
Sbjct: 117 YKADEILQR 125
>ref|NP_253604.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
 pir||G83032 hypothetical protein PA4917 [imported] - Pseudomonas aeruginosa
           (strain PAO1)
 gb|AAG08302.1|AE004904_10 (AE004904) hypothetical protein [Pseudomonas aeruginosa]
          Length = 200

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 11/138 (7%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERAL 72
           LA+YGG+FDP H  H ++I +   LL + ++ ++P++++ F K    D + R + L R  
Sbjct: 26  LAVYGGAFDPPHPGHESVIRRA--LLCAERVALVPSHRHAFGKR-MGDFELRCRWLARLA 82

Query: 73  KGID--RVLLSDFEIKQERAVPTIESVLHFQKL-----YHPQTLYLVIGADCLRHLSSWT 125
           + ID  RV     E       P + S+   + L          + L+IGAD    L  + 
Sbjct: 83  RRIDPRRVYCEPIEAGLMPDRPAVYSIDLLEALAARSGLASARIALLIGADNEAELPRFE 142

Query: 126 NAKELLKRV-ELVVFERI 142
            A EL  R   LV  ER+
Sbjct: 143 RAAELCWRFGRLVAEERL 160
>pir||B53293 flm3 region hypothetical protein 2 - Synechococcus sp.  (strain
          PCC 7942)
          Length = 167

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)

Query: 14 ALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALK 73
          A+Y GSFDP+   HL IIE+   L     + VL   +NP K+P F   Q R +++ +A+ 
Sbjct: 4  AIYPGSFDPITFGHLDIIERGCRLFDQVYVAVL---RNPNKQPMF-SVQERLEQIAKAIA 59

Query: 74 GIDRVLLSDFE 84
           +    +  FE
Sbjct: 60 HLPNAQVDSFE 70
>sp|Q55235|COAD_SYNP7 Phosphopantetheine adenylyltransferase (Pantetheine-phosphate
          adenylyltransferase) (PPAT) (Dephospho-CoA
          pyrophosphorylase)
 gb|AAA16170.2| (L19521) ORF2 [Synechococcus sp. PCC 7942]
          Length = 166

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 4/71 (5%)

Query: 14 ALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERALK 73
          A+Y GSFDP+   HL IIE+   L     + VL   +NP K+P F   Q R +++ +A+ 
Sbjct: 3  AIYPGSFDPITFGHLDIIERGCRLFDQVYVAVL---RNPNKQPMF-SVQERLEQIAKAIA 58

Query: 74 GIDRVLLSDFE 84
           +    +  FE
Sbjct: 59 HLPNAQVDSFE 69
>ref|NP_355708.1| (NC_003062) AGR_C_5040p [Agrobacterium tumefaciens] [Agrobacterium
           tumefaciens str. C58 (Cereon)]
 ref|NP_533443.1| (NC_003304) nicotinate-nucleotide adenylyltransferase
           [Agrobacterium tumefaciens str. C58 (U. Washington)]
 gb|AAK88493.1| (AE008191) AGR_C_5040p [Agrobacterium tumefaciens str. C58
           (Cereon)]
 gb|AAL43759.1| (AE009225) nicotinate-nucleotide adenylyltransferase [Agrobacterium
           tumefaciens str. C58 (U. Washington)]
          Length = 207

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 35/137 (25%), Positives = 61/137 (43%), Gaps = 13/137 (9%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERAL 72
           + L+GGSF+P H  H  + E  L  L   +L  +    NP K      +++    LE  +
Sbjct: 23  VGLFGGSFNPPHAGHALVAEIALRRLGLDQLWWMVTPGNPLK------SRSELASLEDRI 76

Query: 73  KGIDRVLLSDFEIK-----QERAVPTIESVLHFQKLYHPQTLYL-VIGADCLRHLSSWTN 126
              +R L+SD  IK     +   +    + L   K  +P   ++ ++GAD L+    W  
Sbjct: 77  AACER-LVSDPRIKVTAFEKSLGISYTANTLAKVKAKNPHVRFIWIMGADNLKSFHRWQK 135

Query: 127 AKELLKRVELVVFERIG 143
            +E+ +   + V +R G
Sbjct: 136 WREIAETFPIAVIDRPG 152
>ref|NP_488740.1| (NC_003272) pantetheine-phosphate adenylyltransferase [Nostoc sp.
          PCC 7120]
 dbj|BAB76399.1| (AP003597) pantetheine-phosphate adenylyltransferase [Nostoc sp.
          PCC 7120]
          Length = 191

 Score = 42.7 bits (99), Expect = 0.002
 Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)

Query: 13 LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERAL 72
          +A+Y GSFDP+   HL II++   L     L+++   +NP K P F   Q R +++ R  
Sbjct: 2  IAIYPGSFDPITLGHLDIIQRGSRLF---DLVIVAVLRNPSKVPLF-SVQERLEQIRRTT 57

Query: 73 KGIDRVLLSDFE 84
          K +  V    F+
Sbjct: 58 KHLPNVEADGFD 69
>ref|NP_104985.1| (NC_002678) NICOTINATE-NUCLEOTIDE ADENYLYLTRANSFERASE
           [Mesorhizobium loti]
 dbj|BAB50771.1| (AP003003) nicotinate-nucleotide adenylyltransferase [Mesorhizobium
           loti]
          Length = 195

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 33/132 (25%), Positives = 55/132 (41%), Gaps = 3/132 (2%)

Query: 13  LALYGGSFDPLHKAHLAIIEQTLELLPSAKLIVLPAYQNPFKKPCFLDAQTRFKELERAL 72
           + L+GGSF+P H  H  + E  L  L   +L  +    NP K    L       +L   +
Sbjct: 10  VGLFGGSFNPPHAGHALVAEIALRRLALDQLWWMVTPGNPLKSTRELAPLAERLQLSEQI 69

Query: 73  KGIDRVLLSDFEIKQERAVPTIESVLHFQKLYHPQTLYL-VIGADCLRHLSSWTNAKELL 131
               ++ ++ FE      V      L   K  +P   ++ ++GAD LR    W   +E++
Sbjct: 70  ARNPKIKVTAFEAAHH--VRYTADTLALVKARNPGVDFVWIMGADSLRDFHRWQRWREIV 127

Query: 132 KRVELVVFERIG 143
               + V +R G
Sbjct: 128 LTFPIAVIDRPG 139
  Database: /home/scwang/download_20020708_db/nr
    Posted date:  Aug 7, 2002 12:55 PM
  Number of letters in database: 324,149,939
  Number of sequences in database:  1,026,957
  
Lambda     K      H
   0.322    0.139    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,862,869
Number of Sequences: 1026957
Number of extensions: 3934917
Number of successful extensions: 8680
Number of sequences better than 1.0e-02: 62
Number of HSP's better than  0.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 8610
Number of HSP's gapped (non-prelim): 63
length of query: 174
length of database: 324,149,939
effective HSP length: 113
effective length of query: 61
effective length of database: 208,103,798
effective search space: 12694331678
effective search space used: 12694331678
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 93 (40.4 bits)