BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646024|ref|NP_208205.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(113 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_208205.1| (NC_000915) conserved hypothetical protein... 228 1e-59
ref|NP_224027.1| (NC_000921) putative [Helicobacter pylori ... 223 4e-58
ref|NP_282546.1| (NC_002163) hypothetical protein Cj1405 [C... 103 3e-22
ref|NP_213873.1| (NC_000918) hypothetical protein [Aquifex ... 64 4e-10
ref|NP_622573.1| (NC_003869) conserved hypothetical protein... 59 1e-08
ref|NP_246861.1| (NC_002663) unknown [Pasteurella multocida... 57 3e-08
ref|NP_104982.1| (NC_002678) hypothetical protein [Mesorhiz... 57 3e-08
ref|NP_422226.1| (NC_002696) iojap-related protein [Cauloba... 57 4e-08
ref|NP_227962.1| (NC_000853) conserved hypothetical protein... 55 1e-07
sp|P05848|YBEB_ECOLI Hypothetical protein ybeB >gi|1778554|... 55 1e-07
ref|NP_455218.1| (NC_003198) conserved hypothetical protein... 55 1e-07
ref|NP_355707.1| (NC_003062) AGR_C_5039p [Agrobacterium tum... 54 3e-07
ref|NP_533442.1| (NC_003304) conserved hypothetical protein... 54 3e-07
ref|NP_438207.1| (NC_000907) conserved hypothetical protein... 54 4e-07
ref|NP_406132.1| (NC_003143) conserved hypothetical protein... 53 6e-07
ref|NP_230599.1| (NC_002505) conserved hypothetical protein... 52 1e-06
ref|NP_606568.1| (NC_003485) conserved hypothetical protein... 52 2e-06
ref|NP_268651.1| (NC_002737) conserved hypothetical protein... 50 5e-06
ref|NP_252694.1| (NC_002516) conserved hypothetical protein... 49 8e-06
ref|NP_387269.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhiz... 49 8e-06
ref|NP_360890.1| (NC_003103) unknown [Rickettsia conorii] >... 48 2e-05
ref|NP_346180.1| (NC_003028) iojap-related protein [Strepto... 48 2e-05
ref|NP_643086.1| (NC_003919) conserved hypothetical protein... 48 2e-05
ref|NP_637963.1| (NC_003902) conserved hypothetical protein... 48 2e-05
ref|NP_539128.1| (NC_003317) iojap protein family [Brucella... 47 3e-05
ref|NP_441023.1| (NC_000911) putative iojap protein [Synech... 47 3e-05
ref|NP_286363.1| (NC_002655) ybeB gene product [Escherichia... 47 4e-05
ref|NP_299459.1| (NC_002488) conserved hypothetical protein... 47 4e-05
ref|NP_359181.1| (NC_003098) Conserved hypothetical protein... 47 4e-05
ref|NP_266384.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococ... 47 5e-05
ref|NP_296299.1| (NC_001263) conserved hypothetical protein... 46 7e-05
ref|NP_520315.1| (NC_003295) HYPOTHETICAL PROTEIN [Ralstoni... 45 2e-04
pir||S28019 gene iojap protein - maize >gi|22349|emb|CAA787... 44 3e-04
ref|NP_390440.1| (NC_000964) similar to hypothetical protei... 44 3e-04
gb|AAF23489.1|AF209778_1 (AF209778) 312 protein [Drosophila... 44 3e-04
ref|NP_612105.1| (NM_138261) 312 gene product [Drosophila m... 44 3e-04
ref|NP_221161.1| (NC_000963) unknown [Rickettsia prowazekii... 44 3e-04
ref|NP_566439.1| (NM_112129) expressed protein [Arabidopsis... 44 4e-04
gb|AAM65470.1| (AY087920) putative iojap protein [Arabidops... 44 4e-04
gb|EAA10357.1| (AAAB01008948) agCP2160 [Anopheles gambiae s... 43 6e-04
ref|NP_661046.1| (NC_002932) iojap-related protein [Chlorob... 43 8e-04
ref|NP_220288.1| (NC_000117) iojap superfamily ortholog [Ch... 42 0.002
ref|NP_296529.1| (NC_002620) conserved hypothetical protein... 42 0.002
gb|AAM60940.1| (AY084358) unknown [Arabidopsis thaliana] 40 0.005
ref|NP_242194.1| (NC_002570) BH1328~unknown conserved prote... 40 0.005
ref|NP_564901.1| (NM_105428) expressed protein [Arabidopsis... 40 0.005
ref|NP_488209.1| (NC_003272) hypothetical protein [Nostoc s... 40 0.006
ref|NP_470857.1| (NC_003212) lin1521 [Listeria innocua] >gi... 40 0.006
ref|XP_132537.1| (XM_132537) RIKEN cDNA 2410003K15 [Mus mus... 39 0.008
>ref|NP_208205.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
pir||F64696 ybeB protein homolog - Helicobacter pylori (strain 26695)
gb|AAD08457.1| (AE000642) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 113
Score = 228 bits (580), Expect = 1e-59
Identities = 113/113 (100%), Positives = 113/113 (100%)
Query: 1 MNQRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL 60
MNQRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL
Sbjct: 1 MNQRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL 60
Query: 61 GEVFYQIDESNEEWIILDLGDLMIHLFTEECRKKFDLEGFLNAYKRGLPYQNA 113
GEVFYQIDESNEEWIILDLGDLMIHLFTEECRKKFDLEGFLNAYKRGLPYQNA
Sbjct: 61 GEVFYQIDESNEEWIILDLGDLMIHLFTEECRKKFDLEGFLNAYKRGLPYQNA 113
>ref|NP_224027.1| (NC_000921) putative [Helicobacter pylori J99]
pir||F71822 hypothetical protein jhp1309 - Helicobacter pylori (strain J99)
gb|AAD06895.1| (AE001554) putative [Helicobacter pylori J99]
Length = 113
Score = 223 bits (567), Expect = 4e-58
Identities = 111/113 (98%), Positives = 111/113 (98%)
Query: 1 MNQRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL 60
MNQRIE ITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL
Sbjct: 1 MNQRIEMITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL 60
Query: 61 GEVFYQIDESNEEWIILDLGDLMIHLFTEECRKKFDLEGFLNAYKRGLPYQNA 113
GEVFYQIDESN EWIILDLGDLMIHLFTEECRKKFDLEGFLNAYKRGLPYQNA
Sbjct: 61 GEVFYQIDESNGEWIILDLGDLMIHLFTEECRKKFDLEGFLNAYKRGLPYQNA 113
>ref|NP_282546.1| (NC_002163) hypothetical protein Cj1405 [Campylobacter jejuni]
pir||E81285 hypothetical protein Cj1405 [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73829.1| (AL139078) hypothetical protein Cj1405 [Campylobacter jejuni]
Length = 108
Score = 103 bits (258), Expect = 3e-22
Identities = 55/107 (51%), Positives = 73/107 (67%), Gaps = 1/107 (0%)
Query: 1 MNQRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL 60
M +RI+ I +LDEKKA +I ID+S+ Y V+ VIIA TL +HALSL+D LK LK
Sbjct: 1 MQERIDLIVKILDEKKAENIKTIDMSEQEYFVKYVIIAATLGERHALSLIDELKTRLKAK 60
Query: 61 GEVFYQIDESNEEWIILDLGDLMIHLFTEECRKKFDLEGFLNAYKRG 107
GE F ID S+EEW ++DLGD++IHL T E R +++E L K+G
Sbjct: 61 GEEFLNID-SSEEWSVIDLGDILIHLLTPEHRGIYNIEELLENLKKG 106
>ref|NP_213873.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
pir||B70410 ybeB protein homolog aq_1272 - Aquifex aeolicus
gb|AAC07282.1| (AE000732) hypothetical protein [Aquifex aeolicus]
Length = 109
Score = 63.5 bits (153), Expect = 4e-10
Identities = 35/97 (36%), Positives = 58/97 (59%), Gaps = 1/97 (1%)
Query: 3 QRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLG- 61
++++ I LL+ KKA DI +D+SK L + +IAT + HA +L D L+ L+ G
Sbjct: 2 EKLKLIKELLENKKAEDIVILDVSKLTNLADYFVIATANSTTHARALADYLEEELEKRGI 61
Query: 62 EVFYQIDESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
E+ + + WI++DL D ++H+FT E R+ + LE
Sbjct: 62 EIDHIEGKDYGHWILIDLIDTIVHIFTPETREYYGLE 98
>ref|NP_622573.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter
tengcongensis]
gb|AAM24177.1| (AE013057) conserved hypothetical protein [Thermoanaerobacter
tengcongensis]
Length = 117
Score = 58.9 bits (141), Expect = 1e-08
Identities = 32/100 (32%), Positives = 58/100 (58%), Gaps = 7/100 (7%)
Query: 3 QRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGE 62
+++ I +LDEKKAFD+ + + + + + IIAT ++ H +L D ++ K LGE
Sbjct: 6 EKVYKICRVLDEKKAFDVKILYIGELTTIADYFIIATGTSSTHVQALADEVE---KKLGE 62
Query: 63 VFYQIDESNE----EWIILDLGDLMIHLFTEECRKKFDLE 98
+D + EWI++D D+++H+F +E R+ + LE
Sbjct: 63 EGIFVDHVEKDFASEWILMDYEDVVVHIFQQEAREFYSLE 102
>ref|NP_246861.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK04006.1| (AE006229) unknown [Pasteurella multocida]
Length = 103
Score = 57.4 bits (137), Expect = 3e-08
Identities = 30/99 (30%), Positives = 52/99 (52%), Gaps = 1/99 (1%)
Query: 1 MNQRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL 60
MN ++ I LD+ KA DI +D+ + +D++I T +++H SL L K
Sbjct: 1 MNTLVDFIIDKLDDLKATDILRLDVRGKSPITDDMVICTGNSSRHVSSLAQNLITECKQA 60
Query: 61 G-EVFYQIDESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
G E F + +WI++DLG ++H+ + R+ + LE
Sbjct: 61 GFETFGDEGQETADWIVVDLGQAIVHIMQADSREMYQLE 99
>ref|NP_104982.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB50768.1| (AP003003) hypothetical protein [Mesorhizobium loti]
Length = 125
Score = 57.4 bits (137), Expect = 3e-08
Identities = 28/99 (28%), Positives = 60/99 (60%), Gaps = 1/99 (1%)
Query: 1 MNQRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL 60
+++ I T+ A L++ KA +I ID+ L + +++A+ +++H ++ D L LK
Sbjct: 13 VSRAINTVLASLEDSKAENIVSIDIQGKSSLGDYMVVASGRSHRHVSAVADHLLKALKDA 72
Query: 61 GEVFYQIDE-SNEEWIILDLGDLMIHLFTEECRKKFDLE 98
G +++ S +W+++D GD+++H+F E R+ ++LE
Sbjct: 73 GLGTARVEGLSGADWVLIDSGDIIVHVFRPEVREFYNLE 111
>ref|NP_422226.1| (NC_002696) iojap-related protein [Caulobacter crescentus CB15]
gb|AAK25394.1| (AE006003) iojap-related protein [Caulobacter crescentus CB15]
Length = 113
Score = 57.0 bits (136), Expect = 4e-08
Identities = 28/88 (31%), Positives = 54/88 (60%), Gaps = 1/88 (1%)
Query: 12 LDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQIDE-S 70
LD+ KA DI HIDL+ + + +I+A+ +++H +L D + LK G +++
Sbjct: 12 LDDDKAQDIVHIDLTDKSSVADSLIVASGRSHRHVGALADHILRALKENGFGKARVEGLP 71
Query: 71 NEEWIILDLGDLMIHLFTEECRKKFDLE 98
+ +W+++D GD+++HLF E R +++E
Sbjct: 72 HCDWVLIDAGDVVVHLFRPEVRSFYNIE 99
>ref|NP_227962.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||A72412 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35240.1|AE001700_4 (AE001700) conserved hypothetical protein [Thermotoga maritima]
Length = 110
Score = 55.5 bits (132), Expect = 1e-07
Identities = 31/96 (32%), Positives = 51/96 (52%), Gaps = 1/96 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
+ I + EK + +D+ KTP + +I T + H ++ D L + +K L
Sbjct: 5 LRKILKKISEKGGENPVVLDMRKTPVPTDYFVIFTANSYTHMRAMRDELIDLIKELSLPL 64
Query: 65 YQIDESNE-EWIILDLGDLMIHLFTEECRKKFDLEG 99
D+ E EW+I+D G ++IH+FTE+ R +DLEG
Sbjct: 65 IYYDKGEEYEWLIIDAGSVVIHIFTEKGRDFYDLEG 100
>sp|P05848|YBEB_ECOLI Hypothetical protein ybeB
gb|AAB40837.1| (U82598) HI0034 homolog [Escherichia coli]
Length = 105
Score = 55.1 bits (131), Expect = 1e-07
Identities = 25/88 (28%), Positives = 54/88 (60%), Gaps = 1/88 (1%)
Query: 12 LDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQID-ES 70
+D+ K DI +D+ + + +II T +++H +S+ D + + G + ++ E+
Sbjct: 14 IDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGEN 73
Query: 71 NEEWIILDLGDLMIHLFTEECRKKFDLE 98
+ +WI++DLGD+++H+ EE R+ ++LE
Sbjct: 74 SADWIVVDLGDVIVHVMQEESRRLYELE 101
>ref|NP_455218.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
ref|NP_459634.1| (NC_003197) putative ACR, homolog of plant Iojap protein
[Salmonella typhimurium LT2]
gb|AAL19593.1| (AE008725) putative ACR, homolog of plant Iojap protein [Salmonella
typhimurium LT2]
emb|CAD05119.1| (AL627267) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 105
Score = 55.1 bits (131), Expect = 1e-07
Identities = 25/88 (28%), Positives = 53/88 (59%), Gaps = 1/88 (1%)
Query: 12 LDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQIDESN 71
+D+ K DI +D+ + + +II T +++H +S+ D + + + G + ++ N
Sbjct: 14 IDDLKGQDIIALDVQGKSSITDCMIICTGTSSRHVMSIADHVVQSSRAAGMLPLGVEGEN 73
Query: 72 E-EWIILDLGDLMIHLFTEECRKKFDLE 98
+WI++DLGD+++H+ EE R+ ++LE
Sbjct: 74 AADWIVVDLGDVIVHVMQEESRRLYELE 101
>ref|NP_355707.1| (NC_003062) AGR_C_5039p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK88492.1| (AE008191) AGR_C_5039p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 163
Score = 54.3 bits (129), Expect = 3e-07
Identities = 25/95 (26%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
+ET+ A L++ KA DI +D++ L + +++ + +N+H ++ + L +K G
Sbjct: 55 LETVLASLEDSKAEDIVSLDIAGKSALADYMVVVSGRSNRHVSAICEHLLKDMKDEGFGN 114
Query: 65 YQIDESNE-EWIILDLGDLMIHLFTEECRKKFDLE 98
+I+ +W+++D GD+++H+F E R +++E
Sbjct: 115 ARIEGLEAGDWVVIDAGDIIVHVFRPEIRVFYNIE 149
>ref|NP_533442.1| (NC_003304) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL43758.1| (AE009225) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 162
Score = 54.3 bits (129), Expect = 3e-07
Identities = 25/95 (26%), Positives = 56/95 (58%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
+ET+ A L++ KA DI +D++ L + +++ + +N+H ++ + L +K G
Sbjct: 54 LETVLASLEDSKAEDIVSLDIAGKSALADYMVVVSGRSNRHVSAICEHLLKDMKDEGFGN 113
Query: 65 YQIDESNE-EWIILDLGDLMIHLFTEECRKKFDLE 98
+I+ +W+++D GD+++H+F E R +++E
Sbjct: 114 ARIEGLEAGDWVVIDAGDIIVHVFRPEIRVFYNIE 148
>ref|NP_438207.1| (NC_000907) conserved hypothetical protein [Haemophilus
influenzae Rd]
sp|P44471|YBEB_HAEIN Hypothetical protein HI0034
pir||H64140 ybeB protein homolog HI0034 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC21712.1| (U32688) conserved hypothetical protein [Haemophilus influenzae
Rd]
Length = 102
Score = 53.5 bits (127), Expect = 4e-07
Identities = 26/95 (27%), Positives = 50/95 (52%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLG-EV 63
+E + LD K DI H D+ + +++II T +++ ++ D L K G E
Sbjct: 4 VEFLMETLDGLKGTDIVHFDVRGKSSITDNMIICTGTSSRQVSAMADNLITECKKAGFET 63
Query: 64 FYQIDESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
F + ++ +WI++DLG ++H+ + R+ + LE
Sbjct: 64 FGEEGKNTADWIVVDLGQAIVHIMQRDAREMYQLE 98
>ref|NP_406132.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]
emb|CAC92849.1| (AJ414153) conserved hypothetical protein [Yersinia pestis]
Length = 105
Score = 53.1 bits (126), Expect = 6e-07
Identities = 26/94 (27%), Positives = 53/94 (55%), Gaps = 1/94 (1%)
Query: 6 ETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFY 65
E + LD+ K DI +D+ + + +II T + +H ++L D + + G +
Sbjct: 8 EFVIDKLDDLKGQDIIALDVQGKSSITDCMIICTGTSTRHVMALADNVVQESRAAGMIPL 67
Query: 66 QID-ESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
I+ + +WI++DLG++++H+ EE R+ ++LE
Sbjct: 68 GIEGQGVSDWIVVDLGEVIVHVMQEESRRMYELE 101
>ref|NP_230599.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||C82260 conserved hypothetical protein VC0952 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF94114.1| (AE004177) conserved hypothetical protein [Vibrio cholerae]
Length = 105
Score = 52.4 bits (124), Expect = 1e-06
Identities = 26/87 (29%), Positives = 49/87 (55%), Gaps = 1/87 (1%)
Query: 13 DEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQIDESNE 72
D+ KA DI +D+ + + + +I+ T + +H S+ + + N K G ++ NE
Sbjct: 15 DDMKAVDIVTLDVKEKSSVTDYMIVCTGTSKRHVASIAEHVANEAKLSGLQPLGMNGENE 74
Query: 73 -EWIILDLGDLMIHLFTEECRKKFDLE 98
EW++LD+G +M+H+ E R+ + LE
Sbjct: 75 GEWVVLDMGSVMLHVMQEAPRELYQLE 101
>ref|NP_606568.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
gb|AAL97067.1| (AE009976) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 117
Score = 51.6 bits (122), Expect = 2e-06
Identities = 26/95 (27%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
++ + DEK+A DI +DL L + +IA+ ++ ++ D ++ +K G
Sbjct: 7 LKIVVEATDEKRAKDILALDLEGLTSLTDYFVIASATNSRQLEAIADNIREKVKEAGGDA 66
Query: 65 YQIDESNEE-WIILDLGDLMIHLFTEECRKKFDLE 98
++ +++ W++LDL D+++HLF E+ R ++LE
Sbjct: 67 SHVEGNSQAGWVLLDLTDVVVHLFLEDERYHYNLE 101
>ref|NP_268651.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
gb|AAK33372.1| (AE006496) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
Length = 125
Score = 50.1 bits (118), Expect = 5e-06
Identities = 25/95 (26%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
++ + +EK+A DI +DL L + +IA+ ++ ++ D ++ +K G
Sbjct: 15 LKIVVEATEEKRAKDILALDLEGLTSLTDYFVIASATNSRQLEAIADNIREKVKEAGGDA 74
Query: 65 YQIDESNEE-WIILDLGDLMIHLFTEECRKKFDLE 98
++ +++ W++LDL D+++HLF E+ R ++LE
Sbjct: 75 SHVEGNSQAGWVLLDLTDVVVHLFLEDERYHYNLE 109
>ref|NP_252694.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||A83147 conserved hypothetical protein PA4005 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG07392.1|AE004817_16 (AE004817) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 118
Score = 49.3 bits (116), Expect = 8e-06
Identities = 30/101 (29%), Positives = 54/101 (52%), Gaps = 9/101 (8%)
Query: 3 QRIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLD-----ALKNTL 57
Q ++ L++ KA DI +D+ + + ++IA +++ SL D A +N +
Sbjct: 5 QLVQVAIDALEDLKAQDIVTLDVRDKTSVTDYMVIACGSSSRQVKSLADNVLTKAKENGV 64
Query: 58 KPLGEVFYQIDESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
KPLG + + EW +LDLGD+++H+ R+ +DLE
Sbjct: 65 KPLGSEGLE----SGEWALLDLGDVVVHVMLPATRQFYDLE 101
>ref|NP_387269.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC47742.1| (AL591793) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 163
Score = 49.3 bits (116), Expect = 8e-06
Identities = 23/95 (24%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
++ + L++ KA +I ID++ L + +++ + +N+H +++ D L LK G
Sbjct: 55 LQLVLESLEDSKAENIVTIDIAGKSALGDFMVVVSGRSNRHVMAIADHLITDLKDDGLGR 114
Query: 65 YQIDE-SNEEWIILDLGDLMIHLFTEECRKKFDLE 98
+++ +W+++D GD+++H+F E R +++E
Sbjct: 115 ARVEGLEGGDWVLIDTGDVIVHIFRPEIRAFYNIE 149
>ref|NP_360890.1| (NC_003103) unknown [Rickettsia conorii]
gb|AAL03791.1| (AE008672) unknown [Rickettsia conorii]
Length = 108
Score = 47.8 bits (112), Expect = 2e-05
Identities = 29/92 (31%), Positives = 50/92 (53%), Gaps = 1/92 (1%)
Query: 8 ITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQI 67
I L EKKA DI IDL++ L + +I A+ + K+ ++ + + LK + I
Sbjct: 12 ILECLSEKKAEDIEVIDLTEKHKLADYIIFASGRSTKNVGAIAEYVALELKNNAGINSNI 71
Query: 68 DE-SNEEWIILDLGDLMIHLFTEECRKKFDLE 98
+ EW+++D G ++I++F E R+ F LE
Sbjct: 72 EGLGKSEWVLIDAGTILINIFYPEVREHFKLE 103
>ref|NP_346180.1| (NC_003028) iojap-related protein [Streptococcus pneumoniae TIGR4]
gb|AAK75820.1| (AE007467) iojap-related protein [Streptococcus pneumoniae TIGR4]
Length = 117
Score = 47.8 bits (112), Expect = 2e-05
Identities = 24/101 (23%), Positives = 58/101 (56%), Gaps = 3/101 (2%)
Query: 1 MNQR--IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLK 58
MN++ +E + DEK+A DI +D+ + + ++I +++ ++ ++ ++ +
Sbjct: 1 MNEKELLELVVKAADEKRAEDILALDVQDLTSVTDYLVITSSMNSRQLDAIAANIREKVA 60
Query: 59 PLGEVFYQID-ESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
G ++ ++ W++LDLG +++H+F+EE R ++LE
Sbjct: 61 QAGFKGSHVEGDAAGGWVLLDLGAVVVHIFSEEMRAHYNLE 101
>ref|NP_643086.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37622.1| (AE011918) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 137
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/95 (24%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
+ T+ ++E KA D+ ID+ + + +++ + + +H S+ D + K L +
Sbjct: 23 LATVREAVEELKAKDVVEIDVRGKSSVCDYMVVVSGTSTRHVKSIADEVVKFAKRLDVMP 82
Query: 65 YQIDESNE-EWIILDLGDLMIHLFTEECRKKFDLE 98
++ E EW+++DLGD+++H+ R+ + LE
Sbjct: 83 LGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALE 117
>ref|NP_637963.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM41887.1| (AE012373) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 139
Score = 47.8 bits (112), Expect = 2e-05
Identities = 23/95 (24%), Positives = 52/95 (54%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
+ T+ ++E KA D+ ID+ + + +++A+ + +H S+ + + K L +
Sbjct: 23 LATVREAVEELKAKDVVEIDVRGKSSVCDYMVVASGTSTRHVKSIAEEVVKFAKRLDVMP 82
Query: 65 YQIDESNE-EWIILDLGDLMIHLFTEECRKKFDLE 98
++ E EW+++DLGD+++H+ R+ + LE
Sbjct: 83 LGVEGEREAEWVLVDLGDVVVHVMLPRVREFYALE 117
>ref|NP_539128.1| (NC_003317) iojap protein family [Brucella melitensis]
gb|AAL51392.1| (AE009463) iojap protein family [Brucella melitensis]
Length = 156
Score = 47.4 bits (111), Expect = 3e-05
Identities = 24/90 (26%), Positives = 51/90 (56%), Gaps = 1/90 (1%)
Query: 10 ALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQIDE 69
A L+ KA I ID+ + + +I+A+ +++H ++ D L L+ G +++
Sbjct: 49 ASLENSKAESIIPIDIRGRSTIGDYMIVASGRSHRHVTAVTDHLVQALREAGCKEMRVEG 108
Query: 70 -SNEEWIILDLGDLMIHLFTEECRKKFDLE 98
+ +W+++D GD+++H+F E R ++LE
Sbjct: 109 LESGDWVLIDTGDIIVHIFRPEVRDFYNLE 138
>ref|NP_441023.1| (NC_000911) putative iojap protein [Synechocystis sp. PCC 6803]
pir||S77145 ybeB protein homolog iojap - Synechocystis sp. (strain PCC 6803)
dbj|BAA17703.1| (D90908) putative iojap protein [Synechocystis sp. PCC 6803]
Length = 154
Score = 47.4 bits (111), Expect = 3e-05
Identities = 25/96 (26%), Positives = 48/96 (49%), Gaps = 2/96 (2%)
Query: 7 TITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQ 66
TI +E+KA D+ + ++ YL + +I T + ++ D ++ ++ +
Sbjct: 33 TIAQAAEERKAGDLVILKVTDVSYLADYFVICTGFSRTQVRAIADNIEKQVELVHGQLPT 92
Query: 67 IDESNEE--WIILDLGDLMIHLFTEECRKKFDLEGF 100
E N E W++ D GD+++H F E R+ + LE F
Sbjct: 93 HTEGNSESIWVLQDFGDVLVHTFMPEEREFYKLEAF 128
>ref|NP_286363.1| (NC_002655) ybeB gene product [Escherichia coli O157:H7 EDL933]
ref|NP_308702.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
ref|NP_415170.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
pir||QQECP7 ybeB protein - Escherichia coli
emb|CAA28199.1| (X04516) ORF1 (AA 1-69) [Escherichia coli]
gb|AAC73738.1| (AE000168) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35284.1| (D90704) Hypothetical 7.6k protein (pbpA 5' region) [Escherichia
coli]
gb|AAG54971.1|AE005242_15 (AE005242) ybeB gene product [Escherichia coli O157:H7 EDL933]
dbj|BAB34098.1| (AP002552) hypothetical protein [Escherichia coli O157:H7]
Length = 69
Score = 47.0 bits (110), Expect = 4e-05
Identities = 20/65 (30%), Positives = 43/65 (65%), Gaps = 1/65 (1%)
Query: 35 VIIATTLANKHALSLLDALKNTLKPLGEVFYQID-ESNEEWIILDLGDLMIHLFTEECRK 93
+II T +++H +S+ D + + G + ++ E++ +WI++DLGD+++H+ EE R+
Sbjct: 1 MIICTGTSSRHVMSIADHVVQESRAAGLLPLGVEGENSADWIVVDLGDVIVHVMQEESRR 60
Query: 94 KFDLE 98
++LE
Sbjct: 61 LYELE 65
>ref|NP_299459.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
pir||A82591 conserved hypothetical protein XF2180 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF84979.1|AE004031_11 (AE004031) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 148
Score = 47.0 bits (110), Expect = 4e-05
Identities = 24/95 (25%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
+ T+ ++ KA DI ID+ + + ++IA+ + +H S+ D + K L +
Sbjct: 34 LSTVHEAVETLKAKDIVKIDVRGKSSVADYLVIASGTSTRHVKSIADEVVKFAKHLNIIP 93
Query: 65 YQIDESNE-EWIILDLGDLMIHLFTEECRKKFDLE 98
++ E EW+++DLG++++H+ R+ + LE
Sbjct: 94 LGVEGKREAEWVLIDLGNVIVHVMLPRVREFYALE 128
>ref|NP_359181.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAL00392.1| (AE008526) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 117
Score = 47.0 bits (110), Expect = 4e-05
Identities = 24/101 (23%), Positives = 57/101 (55%), Gaps = 3/101 (2%)
Query: 1 MNQR--IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLK 58
MN++ +E + DEK+A DI +D+ + + +I +++ ++ ++ ++ +
Sbjct: 1 MNEKELLELVVKAADEKRAEDILALDVQDLTSVTDYFVITSSMNSRQLDAIAANIREKVA 60
Query: 59 PLGEVFYQID-ESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
G ++ ++ W++LDLG +++H+F+EE R ++LE
Sbjct: 61 QAGFKGSHVEGDAAGGWVLLDLGAVVVHIFSEEMRAHYNLE 101
>ref|NP_266384.1| (NC_002662) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
gb|AAK04326.1|AE006260_9 (AE006260) HYPOTHETICAL PROTEIN [Lactococcus lactis subsp. lactis]
Length = 119
Score = 46.6 bits (109), Expect = 5e-05
Identities = 23/96 (23%), Positives = 51/96 (52%), Gaps = 2/96 (2%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
+E + D+KKA DI +D+S+ ++ + +I + ++ ++ D + + G
Sbjct: 7 LEVVVKAADDKKALDIVALDMSEVTFVADYFVIMEAMNSRQLDAIADNIAEAAELAGAKA 66
Query: 65 YQIDESNEE--WIILDLGDLMIHLFTEECRKKFDLE 98
E + + W+++DLGD+++ +F + R F+LE
Sbjct: 67 AGHIEGDAKTGWVLIDLGDIVVSVFGHDERGHFNLE 102
>ref|NP_296299.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||E75256 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF12119.1|AE002087_2 (AE002087) conserved hypothetical protein [Deinococcus radiodurans]
Length = 116
Score = 46.2 bits (108), Expect = 7e-05
Identities = 23/97 (23%), Positives = 52/97 (52%), Gaps = 1/97 (1%)
Query: 4 RIETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEV 63
+++ I E++A D+ +DL++ +E +I T A ++ + ++ + G
Sbjct: 10 QLQAIVEAARERRAEDVVALDLTEVSSSLEYFVICTASAGLQLNAVQENIREKAQEAGLP 69
Query: 64 FYQIDESNEEWIILDLG-DLMIHLFTEECRKKFDLEG 99
I+ +E W++L G +++H+ T++ R+ +DLEG
Sbjct: 70 RPSIEGPSERWLLLAFGGSIVVHIMTKDAREYYDLEG 106
>ref|NP_520315.1| (NC_003295) HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD15901.1| (AL646068) HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 203
Score = 44.7 bits (104), Expect = 2e-04
Identities = 23/92 (25%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
Query: 8 ITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQI 67
I L++ KA DI + + L + +IA+ +N+ +L ++++ +K G +
Sbjct: 10 IVDALEDVKAQDIKVFNTTHLTELFDRTVIASGTSNRQTKALAASVRDAVKEAGGHVIAV 69
Query: 68 D-ESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
+ E EW+++D GD ++H+ + R+ ++LE
Sbjct: 70 EGEDVGEWVLVDCGDAVVHIMQPQLRQYYNLE 101
>pir||S28019 gene iojap protein - maize
emb|CAA78772.1| (Z15063) putative iojap protein [Zea mays]
Length = 228
Score = 44.3 bits (103), Expect = 3e-04
Identities = 30/102 (29%), Positives = 50/102 (48%), Gaps = 9/102 (8%)
Query: 14 EKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQI----DE 69
E KA DI + + + Y II T +N +DA+ + ++ +GE + D
Sbjct: 126 EIKATDIRVLCVRRLVYWTRFFIILTAFSNAQ----IDAISSKMRDIGEKQFSKVASGDT 181
Query: 70 SNEEWIILDLGDLMIHLFTEECRKKFDLEGFL-NAYKRGLPY 110
W +LD GD+++H+F + R ++LE F NA LP+
Sbjct: 182 KPNSWTLLDFGDVVVHIFLPQQRAFYNLEEFYGNATPIELPF 223
>ref|NP_390440.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|P54457|YQEL_BACSU Hypothetical protein yqeL
pir||H69951 ybeB protein homolog yqeL - Bacillus subtilis
dbj|BAA12449.1| (D84432) YqeL [Bacillus subtilis]
emb|CAB14504.1| (Z99117) similar to hypothetical proteins [Bacillus subtilis]
Length = 118
Score = 44.3 bits (103), Expect = 3e-04
Identities = 25/101 (24%), Positives = 56/101 (54%), Gaps = 3/101 (2%)
Query: 1 MNQR--IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLK 58
MNQ+ ++ A D+K+A DI +D+ + + +I ++K ++ +K+
Sbjct: 1 MNQKSILKIAAAACDDKRAEDILALDMEGISLVADYFLICHGNSDKQVQAIAREIKDQAD 60
Query: 59 PLGEVFYQIDESNE-EWIILDLGDLMIHLFTEECRKKFDLE 98
G +++ +E W+++DLGD+++H+F ++ R ++LE
Sbjct: 61 ENGIQVKKMEGFDEARWVLVDLGDVVVHVFHKDERSYYNLE 101
>gb|AAF23489.1|AF209778_1 (AF209778) 312 protein [Drosophila melanogaster]
Length = 241
Score = 44.3 bits (103), Expect = 3e-04
Identities = 22/98 (22%), Positives = 55/98 (55%), Gaps = 4/98 (4%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLK---PLG 61
+E + LL ++ DI + + V+ +++ + + +H LS + ++ K G
Sbjct: 104 VEDLVELLRKENVDDIFVCYVPENLKYVDHLVVCSGRSYRHMLSTAEFVRRMFKIKRGKG 163
Query: 62 EVFYQID-ESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
++ +I+ + + +W+ +DLG++ +H+F+ R+++DLE
Sbjct: 164 DILPRIEGDKSRDWMAMDLGNIALHIFSPSAREEYDLE 201
>ref|NP_612105.1| (NM_138261) 312 gene product [Drosophila melanogaster]
gb|AAF47489.1| (AE003471) 312 gene product [Drosophila melanogaster]
gb|AAL25350.1| (AY060311) GH16625p [Drosophila melanogaster]
Length = 241
Score = 44.3 bits (103), Expect = 3e-04
Identities = 22/98 (22%), Positives = 55/98 (55%), Gaps = 4/98 (4%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLK---PLG 61
+E + LL ++ DI + + V+ +++ + + +H LS + ++ K G
Sbjct: 104 VEDLVELLRKENVDDIFVCYVPENLKYVDHLVVCSGRSYRHMLSTAEFVRRMFKIKRGKG 163
Query: 62 EVFYQID-ESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
++ +I+ + + +W+ +DLG++ +H+F+ R+++DLE
Sbjct: 164 DILPRIEGDKSRDWMAMDLGNIALHIFSPSAREEYDLE 201
>ref|NP_221161.1| (NC_000963) unknown [Rickettsia prowazekii]
pir||E71642 hypothetical protein RP811 - Rickettsia prowazekii
emb|CAA15237.1| (AJ235273) unknown [Rickettsia prowazekii]
Length = 108
Score = 43.9 bits (102), Expect = 3e-04
Identities = 29/92 (31%), Positives = 48/92 (51%), Gaps = 1/92 (1%)
Query: 8 ITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQI 67
I L EKKA DI IDL L + +I A+ + K+ ++ + + LK + I
Sbjct: 12 ILECLIEKKAEDIEVIDLRGKNKLADYIIFASGRSTKNVGAIAEYVALALKNNACINSNI 71
Query: 68 DE-SNEEWIILDLGDLMIHLFTEECRKKFDLE 98
+ EW+++D G ++I++F E R+ F LE
Sbjct: 72 EGLGKSEWVLIDAGAILINIFYPEVREHFKLE 103
>ref|NP_566439.1| (NM_112129) expressed protein [Arabidopsis thaliana]
dbj|BAB02500.1| (AB026645) IojAP protein-like [Arabidopsis thaliana]
Length = 238
Score = 43.5 bits (101), Expect = 4e-04
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 8 ITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFY-- 65
+ + + KA DI + + Y IIAT + +DA+ + ++ L E Y
Sbjct: 127 LAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQ----IDAIGSRMRDLAEKKYGK 182
Query: 66 --QIDESNEEWIILDLGDLMIHLFTEECRKKFDLEGFL-NAYKRGLPYQN 112
D W +LD GD++IHLF R ++LE F NA + LP+++
Sbjct: 183 VANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFED 232
>gb|AAM65470.1| (AY087920) putative iojap protein [Arabidopsis thaliana]
Length = 238
Score = 43.5 bits (101), Expect = 4e-04
Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 9/110 (8%)
Query: 8 ITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFY-- 65
+ + + KA DI + + Y IIAT + +DA+ + ++ L E Y
Sbjct: 127 LAKVASDVKAGDIKVLFVKPLVYWTRFFIIATAFSRPQ----IDAIGSRMRDLAEKKYGK 182
Query: 66 --QIDESNEEWIILDLGDLMIHLFTEECRKKFDLEGFL-NAYKRGLPYQN 112
D W +LD GD++IHLF R ++LE F NA + LP+++
Sbjct: 183 VANGDVKPNSWTLLDFGDVVIHLFLPPQRTFYNLEDFYGNAMQIELPFED 232
>gb|EAA10357.1| (AAAB01008948) agCP2160 [Anopheles gambiae str. PEST]
Length = 266
Score = 43.1 bits (100), Expect = 6e-04
Identities = 25/98 (25%), Positives = 53/98 (53%), Gaps = 4/98 (4%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL---G 61
IE + +L A +I + K V+ + I T + +H + + ++ K
Sbjct: 123 IEDLVTVLRLNSAINIFVCTVPKDIKYVDYMCIVTGRSVRHMRGMAEFVRKVFKMKRHPS 182
Query: 62 EVFYQID-ESNEEWIILDLGDLMIHLFTEECRKKFDLE 98
++ +I+ ES+ +W+ LDLG++ +H+F+ + R+++DLE
Sbjct: 183 DIIPKIEGESSSDWMALDLGNIALHIFSTKAREQYDLE 220
>ref|NP_661046.1| (NC_002932) iojap-related protein [Chlorobium tepidum TLS]
gb|AAM71388.1| (AE012793) iojap-related protein [Chlorobium tepidum TLS]
Length = 163
Score = 42.7 bits (99), Expect = 8e-04
Identities = 23/86 (26%), Positives = 47/86 (53%), Gaps = 1/86 (1%)
Query: 14 EKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQIDESNE- 72
EKK D+ +D+ + + +I T + + A ++ D + + +K GE I+ +
Sbjct: 52 EKKGEDVKILDVRGLTSVTDFFVIITADSERKAKAVTDYIVDEIKEEGERPMHIEGLDTL 111
Query: 73 EWIILDLGDLMIHLFTEECRKKFDLE 98
W+++D D+++H+F + RK +DLE
Sbjct: 112 RWVLIDYVDVVVHIFQPDDRKFYDLE 137
>ref|NP_220288.1| (NC_000117) iojap superfamily ortholog [Chlamydia trachomatis]
pir||D71473 probable iojap - Chlamydia trachomatis (serotype D, strain UW3/Cx)
gb|AAC68364.1| (AE001349) iojap superfamily ortholog [Chlamydia trachomatis]
Length = 119
Score = 41.6 bits (96), Expect = 0.002
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
++ I +D KK + +D+ L + + H ++ D + LK L
Sbjct: 9 LKVIVKAIDNKKGRNPVVLDVQNISQLTDYFVFVEGNVGVHIKAIADTIIEELKKLKVYP 68
Query: 65 YQIDE-SNEEWIILDLGDLMIHLFTEECRKKFDLE 98
++ S+ +W+++D G ++IHLF R+++ LE
Sbjct: 69 LNVEGLSHSDWVVIDYGFIVIHLFVSSVREQYCLE 103
>ref|NP_296529.1| (NC_002620) conserved hypothetical protein [Chlamydia muridarum]
pir||F81735 conserved hypothetical protein TC0150 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39027.1| (AE002282) conserved hypothetical protein [Chlamydia muridarum]
Length = 119
Score = 41.6 bits (96), Expect = 0.002
Identities = 22/95 (23%), Positives = 46/95 (48%), Gaps = 1/95 (1%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVF 64
++ I +D+KK + +D+ L + I H ++ D + LK L
Sbjct: 9 LKGIVRAIDDKKGRNPVILDVQGISQLTDYFIFVEGNVGVHVKAIADTIVEELKKLKVYP 68
Query: 65 YQIDE-SNEEWIILDLGDLMIHLFTEECRKKFDLE 98
++ S+ +W+++D G +++HLF R+++ LE
Sbjct: 69 LNVEGLSHSDWVVIDYGFIVVHLFVSSVREQYCLE 103
>gb|AAM60940.1| (AY084358) unknown [Arabidopsis thaliana]
Length = 184
Score = 40.0 bits (92), Expect = 0.005
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 8 ITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDAL----KNTLKPLGEV 63
+ +L + KA ++T I + + +IAT ++ H ++ AL K K V
Sbjct: 50 VEKILADVKADNVTVIPTHNHCFWADFTVIATGRSDWHLRNIAQALVYRAKQKQKGAKHV 109
Query: 64 FY-QIDESNEEWIILDLGDLMIHLFTEECRKKFDLEGFLNAYKRG 107
+ N +WI++D G ++H E+ R F+LE +A G
Sbjct: 110 MLPSVQGYNSKWIVIDYGKFVVHALDEKARGYFNLESLWSAESSG 154
>ref|NP_242194.1| (NC_002570) BH1328~unknown conserved protein [Bacillus halodurans]
dbj|BAB05047.1| (AP001511) BH1328~unknown conserved protein [Bacillus halodurans]
Length = 117
Score = 40.0 bits (92), Expect = 0.005
Identities = 19/88 (21%), Positives = 47/88 (52%), Gaps = 1/88 (1%)
Query: 12 LDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQIDESN 71
+D+KKA + +++ + + +I + K ++ LK + G +++
Sbjct: 14 VDDKKAEQVVALNMKGISLIADFFLICHGNSEKQVQAIAHELKKVAQEQGIEIKRLEGYE 73
Query: 72 E-EWIILDLGDLMIHLFTEECRKKFDLE 98
+ W+++DLGD+++H+F ++ R ++LE
Sbjct: 74 QARWVLIDLGDVVVHVFHKDERAYYNLE 101
>ref|NP_564901.1| (NM_105428) expressed protein [Arabidopsis thaliana]
gb|AAG52301.1|AC011020_8 (AC011020) unknown protein [Arabidopsis thaliana]
Length = 184
Score = 40.0 bits (92), Expect = 0.005
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 5/105 (4%)
Query: 8 ITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDAL----KNTLKPLGEV 63
+ +L + KA ++T I + + +IAT ++ H ++ AL K K V
Sbjct: 50 VEKILADVKADNVTVIPTHNHCFWADFTVIATGRSDWHLRNIAQALVYRAKQKQKGAKHV 109
Query: 64 FY-QIDESNEEWIILDLGDLMIHLFTEECRKKFDLEGFLNAYKRG 107
+ N +WI++D G ++H E+ R F+LE +A G
Sbjct: 110 MLPSVQGYNSKWIVIDYGKFVVHALDEKARGYFNLESLWSAESSG 154
>ref|NP_488209.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB75868.1| (AP003595) ORF_ID:alr4169~hypothetical protein [Nostoc sp. PCC
7120]
Length = 152
Score = 39.7 bits (91), Expect = 0.006
Identities = 22/96 (22%), Positives = 49/96 (50%), Gaps = 2/96 (2%)
Query: 7 TITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPLGEVFYQ 66
TI ++KA DI + ++ YL + ++ T + ++ DA+++ ++ +
Sbjct: 37 TIAEAASDRKAGDILVLRVADVSYLADYFVMLTGYSKVQVRAIADAIQHEVETKWQRRPL 96
Query: 67 IDESNEE--WIILDLGDLMIHLFTEECRKKFDLEGF 100
E E W++ D GD+++H+ + R+ ++LE F
Sbjct: 97 RTEGKVEGSWVLQDYGDIIVHIMMPKEREFYNLEAF 132
>ref|NP_470857.1| (NC_003212) lin1521 [Listeria innocua]
ref|NP_465011.1| (NC_003210) lmo1486 [Listeria monocytogenes EGD-e]
emb|CAC99564.1| (AL591979) lmo1486 [Listeria monocytogenes]
emb|CAC96752.1| (AL596168) lin1521 [Listeria innocua]
Length = 118
Score = 39.7 bits (91), Expect = 0.006
Identities = 24/87 (27%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 13 DEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKN-TLKPLGEVFYQIDESN 71
D+K+A DI +D+ + +I ++K ++ +K L+ +V
Sbjct: 15 DDKRAEDILALDMKGLSSFADYFVICHGNSDKQVQAIAREIKEKALENQVDVKRLEGFDA 74
Query: 72 EEWIILDLGDLMIHLFTEECRKKFDLE 98
+WI++DLGD++IH+F +E R ++LE
Sbjct: 75 AQWILIDLGDVIIHVFHKEERSYYNLE 101
>ref|XP_132537.1| (XM_132537) RIKEN cDNA 2410003K15 [Mus musculus]
dbj|BAB26886.1| (AK010366) evidence:NAS~hypothetical protein~putative [Mus
musculus]
Length = 228
Score = 39.3 bits (90), Expect = 0.008
Identities = 23/98 (23%), Positives = 51/98 (51%), Gaps = 4/98 (4%)
Query: 5 IETITALLDEKKAFDITHIDLSKTPYLVEDVIIATTLANKHALSLLDALKNTLKPL---G 61
I+ + +LL ++ A DI I + + +I + + +H +++ L K L
Sbjct: 88 IDMLVSLLRQENARDICVIQVPPEMRYTDYFVIGSGTSTRHLHAMVHYLVKMYKHLKCRS 147
Query: 62 EVFYQIDESN-EEWIILDLGDLMIHLFTEECRKKFDLE 98
+ + +I+ + ++W+ +D G ++IHL E R+ ++LE
Sbjct: 148 DPYVKIEGKDADDWLCVDFGSMVIHLMLPETRETYELE 185
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.320 0.139 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,940,898
Number of Sequences: 1026957
Number of extensions: 2390359
Number of successful extensions: 6330
Number of sequences better than 1.0e-02: 49
Number of HSP's better than 0.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 6305
Number of HSP's gapped (non-prelim): 49
length of query: 113
length of database: 324,149,939
effective HSP length: 89
effective length of query: 24
effective length of database: 232,750,766
effective search space: 5586018384
effective search space used: 5586018384
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 90 (39.3 bits)