BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646058|ref|NP_208240.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(117 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_208240.1| (NC_000915) conserved hypothetical protein... 246 3e-65
ref|NP_224060.1| (NC_000921) putative [Helicobacter pylori ... 229 4e-60
ref|NP_282111.1| (NC_002163) hypothetical protein Cj0959c [... 68 2e-11
ref|NP_390946.1| (NC_000964) ytjA [Bacillus subtilis] >gi|1... 64 4e-10
ref|NP_213122.1| (NC_000918) hypothetical protein [Aquifex ... 63 5e-10
ref|NP_267828.1| (NC_002662) conserved hypothetical protein... 59 8e-09
ref|NP_372319.1| (NC_002758) conserved hypothetical protein... 58 2e-08
ref|NP_658825.1| (NC_003995) DUF37, Domain of unknown funct... 58 2e-08
ref|NP_465195.1| (NC_003210) similar to conserved hypotheti... 57 5e-08
ref|NP_471114.1| (NC_003212) similar to conserved hypotheti... 55 1e-07
ref|NP_563574.1| (NC_003366) conserved hypothetical protein... 54 2e-07
ref|NP_243695.1| (NC_002570) alpha-hemolysin [Bacillus halo... 54 3e-07
ref|NP_602917.1| (NC_003454) Alpha-hemolysin [Fusobacterium... 53 6e-07
ref|NP_219986.1| (NC_000117) hypothetical protein [Chlamydi... 53 7e-07
ref|NP_606663.1| (NC_003485) conserved hypothetical protein... 51 2e-06
ref|NP_268693.1| (NC_002737) conserved hypothetical protein... 51 2e-06
ref|NP_624299.1| (NC_003869) conserved hypothetical protein... 51 3e-06
ref|NP_229261.1| (NC_000853) conserved hypothetical protein... 50 6e-06
ref|NP_660911.1| (NC_002932) conserved hypothetical protein... 49 8e-06
ref|NP_660376.1| (NC_004061) hypothetical protein [Buchnera... 48 2e-05
ref|NP_220735.1| (NC_000963) conserved protein [Rickettsia ... 48 2e-05
ref|NP_297131.1| (NC_002620) conserved hypothetical protein... 47 4e-05
sp|P45649|YIDD_COXBU Hypothetical 9.9 kDa protein in rnpA 3... 47 5e-05
ref|NP_485651.1| (NC_003272) hypothetical protein [Nostoc s... 47 5e-05
ref|NP_637611.1| (NC_003902) alpha-hemolysin [Xanthomonas c... 46 7e-05
ref|NP_219386.1| (NC_000919) conserved protein [Treponema p... 45 1e-04
ref|NP_518124.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 45 1e-04
ref|NP_346305.1| (NC_003028) conserved hypothetical protein... 44 3e-04
ref|NP_295873.1| (NC_001263) conserved hypothetical protein... 44 3e-04
ref|NP_359280.1| (NC_003098) Conserved hypothetical protein... 44 4e-04
ref|NP_218439.1| (NC_000962) hypothetical protein Rv3922c [... 44 4e-04
ref|NP_418160.1| (NC_000913) Uncharacterized conserved prot... 43 6e-04
sp|Q44066|HLYA_AERHY Putative alpha-hemolysin >gi|1005414|g... 43 6e-04
ref|NP_628068.1| (NC_003888) hypothetical protein [Streptom... 43 6e-04
sp|P22834|YIDD_PROMI Hypothetical 9.6 kDa protein in rnpA 3... 42 0.001
ref|NP_642675.1| (NC_003919) alpha-hemolysin [Xanthomonas a... 42 0.002
ref|NP_350317.1| (NC_003030) Uncharacterized conserved prot... 41 0.003
sp|O50638|YIDD_LEPIN Hypothetical 8.6 kDa protein >gi|74481... 41 0.003
ref|NP_439162.1| (NC_000907) hemolysin, putative [Haemophil... 40 0.004
ref|NP_250735.1| (NC_002516) conserved hypothetical protein... 40 0.004
sp|Q9L7M0|YIDD_MYCPA Hypothetical 12.4 kDa protein in rnpA ... 40 0.004
ref|NP_283365.1| (NC_003116) hypothetical protein NMA0549 [... 40 0.005
ref|NP_102618.1| (NC_002678) hypothetical protein [Mesorhiz... 40 0.005
ref|NP_274900.1| (NC_003112) conserved hypothetical protein... 40 0.005
ref|NP_062589.1| (NC_002505) conserved hypothetical protein... 39 0.008
ref|NP_442367.1| (NC_000911) hypothetical protein [Synechoc... 39 0.008
>ref|NP_208240.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|O25988|YE49_HELPY Hypothetical protein HP1449
pir||A64701 conserved hypothetical protein HP1449 - Helicobacter pylori
(strain 26695)
gb|AAD08490.1| (AE000645) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 117
Score = 246 bits (629), Expect = 3e-65
Identities = 117/117 (100%), Positives = 117/117 (100%)
Query: 1 MRNNKTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAI 60
MRNNKTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAI
Sbjct: 1 MRNNKTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAI 60
Query: 61 RILSCNPFCSGGIAYPTTRLKRPSLIQSHKDSNRNFKTITFWLVPTKSHATYYIIKV 117
RILSCNPFCSGGIAYPTTRLKRPSLIQSHKDSNRNFKTITFWLVPTKSHATYYIIKV
Sbjct: 61 RILSCNPFCSGGIAYPTTRLKRPSLIQSHKDSNRNFKTITFWLVPTKSHATYYIIKV 117
>ref|NP_224060.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZJG9|YE49_HELPJ Hypothetical protein JHP1342
pir||D71818 hypothetical protein jhp1342 - Helicobacter pylori (strain J99)
gb|AAD06919.1| (AE001557) putative [Helicobacter pylori J99]
Length = 118
Score = 229 bits (584), Expect = 4e-60
Identities = 112/118 (94%), Positives = 113/118 (94%), Gaps = 1/118 (0%)
Query: 1 MRNNKTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAI 60
MRNNKTPFLSAIFTASIRGYQRFFSAFT SSCRFYPTCSNYALWLLCFESPL AMGKIAI
Sbjct: 1 MRNNKTPFLSAIFTASIRGYQRFFSAFTFSSCRFYPTCSNYALWLLCFESPLVAMGKIAI 60
Query: 61 RILSCNPFCSGGIAYPTTRLKRPSLIQSHKDSNRNFKTITFWLVP-TKSHATYYIIKV 117
RILSCNPFCSGGIAYPTTRLKRPSL+QSHKD NRNFKTITFWLVP TKS ATYYIIKV
Sbjct: 61 RILSCNPFCSGGIAYPTTRLKRPSLLQSHKDFNRNFKTITFWLVPTTKSRATYYIIKV 118
>ref|NP_282111.1| (NC_002163) hypothetical protein Cj0959c [Campylobacter jejuni]
sp|Q9PNX6|Y959_CAMJE Hypothetical protein Cj0959c
pir||F81370 hypothetical protein Cj0959c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73216.1| (AL139076) hypothetical protein Cj0959c [Campylobacter jejuni]
Length = 113
Score = 67.8 bits (164), Expect = 2e-11
Identities = 36/101 (35%), Positives = 52/101 (50%), Gaps = 1/101 (0%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGGIAYP 76
+R YQ+F S P++CR+YP+CS YALW ++ A RIL CNPF GG YP
Sbjct: 7 LRFYQKFLSPLKPAACRYYPSCSEYALWQFQKKNFFLAFFSTFFRILRCNPFFKGGFDYP 66
Query: 77 TTRLKRPSLIQSHKDSNRNFKTITFWLVPTKSHATYYIIKV 117
+ K K + F +P K + ++Y+IK+
Sbjct: 67 RVSKNFYPINLCFKPIFLAEKQLCFLYIPYK-NKSFYLIKI 106
>ref|NP_390946.1| (NC_000964) ytjA [Bacillus subtilis]
sp|O34601|YTJA_BACSU Hypothetical protein ytjA
pir||H69993 hypothetical protein ytjA - Bacillus subtilis
gb|AAC00372.1| (AF008220) YtjA [Bacillus subtilis]
emb|CAB15046.1| (Z99119) ytjA [Bacillus subtilis]
Length = 75
Score = 63.5 bits (153), Expect = 4e-10
Identities = 29/65 (44%), Positives = 37/65 (56%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ +F A IRGYQ+F S TP +CRFYPTCS Y + + L RIL C+PF
Sbjct: 1 MKTLFIALIRGYQKFISPLTPPTCRFYPTCSQYGIEAIKTHGALKGGWLTIKRILKCHPF 60
Query: 69 CSGGI 73
GG+
Sbjct: 61 HPGGV 65
>ref|NP_213122.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O66562|Y17A_AQUAE Hypothetical protein AQ_175.1
gb|AAC06538.1| (AE000677) hypothetical protein [Aquifex aeolicus]
Length = 68
Score = 63.2 bits (152), Expect = 5e-10
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ +I ++ +Q+F S PSSCR+YPTCS YA+ + L + K R+L CNPF
Sbjct: 1 MKSIVLIFLKFWQKFISPLYPSSCRYYPTCSTYAIMAVEKYGVLKGLIKAFFRVLRCNPF 60
Query: 69 CSGGIAYP 76
GG+ YP
Sbjct: 61 FKGGVDYP 68
>ref|NP_267828.1| (NC_002662) conserved hypothetical protein [Lactococcus lactis
subsp. lactis]
sp|Q9CF09|YRCB_LACLA Hypothetical protein yrcB
gb|AAK05770.1|AE006398_1 (AE006398) conserved hypothetical protein [Lactococcus lactis
subsp. lactis]
Length = 88
Score = 59.3 bits (142), Expect = 8e-09
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ + ++ GYQR+ S P +CR+YPTCSNY + + P + RIL C+PF
Sbjct: 1 MKKVLVKAVHGYQRWISPALPPACRYYPTCSNYMVQAIEKHGPAKGLAMGTARILRCHPF 60
Query: 69 CSGG 72
C G
Sbjct: 61 CQPG 64
>ref|NP_372319.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_374902.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
ref|NP_646550.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB42881.1| (AP003135) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB57957.1| (AP003363) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
dbj|BAB95598.1| (AP004828) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 85
Score = 58.2 bits (139), Expect = 2e-08
Identities = 30/85 (35%), Positives = 41/85 (47%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ IF A I YQRF S TP +CRFYPTCS Y + + + RIL C+P
Sbjct: 1 MKKIFLAMIHFYQRFISPLTPPTCRFYPTCSEYTREAIQYHGAFKGLYLGIRRILKCHPL 60
Query: 69 CSGGIAYPTTRLKRPSLIQSHKDSN 93
GG + + + SHK ++
Sbjct: 61 HKGGFDPVPLKKDKSASKHSHKHNH 85
>ref|NP_658825.1| (NC_003995) DUF37, Domain of unknown function DUF37 [Bacillus
anthracis A2012] [Bacillus anthracis str. A2012]
Length = 78
Score = 57.8 bits (138), Expect = 2e-08
Identities = 28/64 (43%), Positives = 33/64 (50%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ IF IR YQ+F S TP +CRFYPTCS+Y L RIL C+PF
Sbjct: 1 MKQIFIGIIRFYQKFISPMTPPTCRFYPTCSHYGLEAFQKHGAFKGFWLTCKRILKCHPF 60
Query: 69 CSGG 72
GG
Sbjct: 61 HPGG 64
>ref|NP_465195.1| (NC_003210) similar to conserved hypothetical proteins [Listeria
monocytogenes EGD-e]
emb|CAC99748.1| (AL591980) similar to conserved hypothetical proteins [Listeria
monocytogenes]
Length = 88
Score = 56.6 bits (135), Expect = 5e-08
Identities = 26/67 (38%), Positives = 36/67 (52%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ I IR YQ++ S FTP++CRFYPTCS Y + + L RI C+PF
Sbjct: 1 MKKILIGGIRLYQKYISRFTPATCRFYPTCSAYGIEAIQTHGALKGSYLAIRRISKCHPF 60
Query: 69 CSGGIAY 75
GG+ +
Sbjct: 61 HKGGLDF 67
>ref|NP_471114.1| (NC_003212) similar to conserved hypothetical proteins [Listeria
innocua]
emb|CAC97009.1| (AL596169) similar to conserved hypothetical proteins [Listeria
innocua]
Length = 88
Score = 55.1 bits (131), Expect = 1e-07
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ + IR YQ++ S FTP++CRFYPTCS Y + + L RI C+PF
Sbjct: 1 MKKMLIGGIRLYQKYISRFTPATCRFYPTCSAYGIEAIETHGALKGSYLAIRRISKCHPF 60
Query: 69 CSGGIAY 75
GG+ +
Sbjct: 61 HKGGLDF 67
>ref|NP_563574.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB82364.1| (AP003194) conserved hypothetical protein [Clostridium
perfringens]
Length = 69
Score = 54.3 bits (129), Expect = 2e-07
Identities = 27/68 (39%), Positives = 37/68 (53%), Gaps = 8/68 (11%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLL----CFESPLSAMGKIAIRILS 64
+ +F I+ Y+++ S CRFYPTCS YAL + F+ ++G RIL
Sbjct: 1 MKKLFIVMIKFYRKYISPLKRPCCRFYPTCSQYALEAIQKYGAFKGGFMSIG----RILR 56
Query: 65 CNPFCSGG 72
CNPFC GG
Sbjct: 57 CNPFCKGG 64
>ref|NP_243695.1| (NC_002570) alpha-hemolysin [Bacillus halodurans]
sp|Q9K921|YS28_BACHD Hypothetical protein BH2828
dbj|BAB06548.1| (AP001516) alpha-hemolysin [Bacillus halodurans]
Length = 75
Score = 53.9 bits (128), Expect = 3e-07
Identities = 27/65 (41%), Positives = 34/65 (51%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ F IR YQ+F S TP +CRFYPTCS+Y + + L RI C+PF
Sbjct: 1 MKRFFIGCIRLYQKFISPLTPPTCRFYPTCSHYGIEAIQRFGVLKGGWLTIKRISKCHPF 60
Query: 69 CSGGI 73
GGI
Sbjct: 61 HRGGI 65
>ref|NP_602917.1| (NC_003454) Alpha-hemolysin [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gb|AAL94216.1| (AE010516) hypothetical cytosolic protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 82
Score = 53.1 bits (126), Expect = 6e-07
Identities = 26/64 (40%), Positives = 32/64 (49%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ I IR YQ+F S P+ CRFYPTCS Y L + + RIL C+PF
Sbjct: 1 MKKILILLIRFYQKFISPMFPAKCRFYPTCSQYTLEAIKEHGTIKGTYLAIRRILKCHPF 60
Query: 69 CSGG 72
GG
Sbjct: 61 HEGG 64
>ref|NP_219986.1| (NC_000117) hypothetical protein [Chlamydia trachomatis]
sp|O84479|Y473_CHLTR Hypothetical protein CT473
pir||F71509 hypothetical protein CT473 - Chlamydia trachomatis (serotype D,
strain UW3/Cx)
gb|AAC68073.1| (AE001321) hypothetical protein [Chlamydia trachomatis]
Length = 104
Score = 52.8 bits (125), Expect = 7e-07
Identities = 27/69 (39%), Positives = 38/69 (54%)
Query: 5 KTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILS 64
+T +S+ F + Y+ S F + CRF+PTCS YAL L ++ IA R+L
Sbjct: 2 QTSRISSFFRGLVHLYRWAISPFLGAPCRFFPTCSEYALVALKKHPLRKSLFLIAKRLLK 61
Query: 65 CNPFCSGGI 73
C P+C GGI
Sbjct: 62 CGPWCIGGI 70
>ref|NP_606663.1| (NC_003485) conserved hypothetical protein [Streptococcus
pyogenes MGAS8232]
gb|AAL97162.1| (AE009983) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 86
Score = 51.2 bits (121), Expect = 2e-06
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ + S++ YQ++ S +P SCR+ PTCS Y L + + IA RIL C+PF
Sbjct: 2 MKKLLIVSVKAYQKYISPLSPPSCRYKPTCSAYMLTAIEKHGTKGILMGIA-RILRCHPF 60
Query: 69 CSGGI 73
+GG+
Sbjct: 61 VAGGV 65
>ref|NP_268693.1| (NC_002737) conserved hypothetical protein [Streptococcus
pyogenes] [Streptococcus pyogenes M1 GAS]
sp|P58128|Y370_STRPY Hypothetical protein SPy0370
gb|AAK33414.1| (AE006500) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
Length = 86
Score = 51.2 bits (121), Expect = 2e-06
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ + S++ YQ++ S +P SCR+ PTCS Y L + + IA RIL C+PF
Sbjct: 1 MKKLLIVSVKAYQKYISPLSPPSCRYKPTCSAYMLTAIEKHGTKGILMGIA-RILRCHPF 59
Query: 69 CSGGI 73
+GG+
Sbjct: 60 VAGGV 64
>ref|NP_624299.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter
tengcongensis]
gb|AAM25903.1| (AE013217) conserved hypothetical protein [Thermoanaerobacter
tengcongensis]
Length = 69
Score = 50.8 bits (120), Expect = 3e-06
Identities = 25/56 (44%), Positives = 31/56 (54%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
IR YQ++ S P +CRFYPTCS Y++ + L RIL CNPF GG
Sbjct: 9 IRLYQKYISPMKPRTCRFYPTCSQYSIEAISKYGLLKGGLMSIWRILRCNPFNPGG 64
>ref|NP_229261.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
sp|Q9X1H3|YE62_THEMA Hypothetical protein TM1462
pir||G72251 conserved hypothetical protein - Thermotoga maritima (strain
MSB8)
gb|AAD36530.1|AE001797_10 (AE001797) conserved hypothetical protein [Thermotoga maritima]
Length = 81
Score = 49.7 bits (117), Expect = 6e-06
Identities = 26/56 (46%), Positives = 29/56 (51%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
IR YQR+ S P +CRF PTCSNY + L L RIL CNP GG
Sbjct: 9 IRFYQRYISPLKPPTCRFTPTCSNYFIQALEKHGLLKGTFLGLRRILRCNPLSKGG 64
>ref|NP_660911.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum
TLS]
gb|AAM71253.1| (AE012780) conserved hypothetical protein [Chlorobium tepidum
TLS]
Length = 83
Score = 49.3 bits (116), Expect = 8e-06
Identities = 24/56 (42%), Positives = 30/56 (52%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
IR YQ F S SC+++PTCSNYA+ + A R+L CNPF GG
Sbjct: 9 IRFYQSFISPLLGPSCKYHPTCSNYAIEAFRQHNFFYASWLTVWRVLRCNPFSKGG 64
>ref|NP_660376.1| (NC_004061) hypothetical protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
sp|P29432|YIDD_BUCAP Hypothetical 9.9 kDa protein in rnpA 3'region
pir||JC1156 hypothetical 10K protein (rnpA 3' region) - Buchnera aphidicola
gb|AAA73146.1| (M80817) inner membrane protein [Buchnera aphidicola]
gb|AAC38103.1| (AF008210) 10-kDa hypothetical protein [Buchnera aphidicola]
gb|AAM67587.1| (AE014077) hypothetical protein [Buchnera aphidicola str. Sg
(Schizaphis graminum)]
Length = 85
Score = 48.1 bits (113), Expect = 2e-05
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 20 YQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
YQ + S F PS+CRFYPTCS Y + L + + +R+ C+P GG
Sbjct: 19 YQNYISFFMPSNCRFYPTCSTYMILSLRKFGVIKGIILTILRLFKCHPLHQGG 71
>ref|NP_220735.1| (NC_000963) conserved protein [Rickettsia prowazekii]
Length = 90
Score = 48.1 bits (113), Expect = 2e-05
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
++ I I Y+ F S ++C F+PTCS YA + + + RI+ C PF
Sbjct: 9 MAKILLLIITFYKYFISPLLGNNCLFHPTCSEYAKEAITTHGSIKGLWFTFRRIIKCQPF 68
Query: 69 CSGGIAYPTTRLK 81
CSGG T +K
Sbjct: 69 CSGGYDNVPTSIK 81
>ref|NP_297131.1| (NC_002620) conserved hypothetical protein [Chlamydia muridarum]
sp|Q9PJS0|Y758_CHLMU Hypothetical protein TC0758
pir||B81668 conserved hypothetical protein TC0758 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39562.1| (AE002344) conserved hypothetical protein [Chlamydia muridarum]
Length = 97
Score = 47.0 bits (110), Expect = 4e-05
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 3/90 (3%)
Query: 5 KTPFLSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILS 64
KT ++ F I Y+ S S CRF+P+CS YAL L ++ IA R+L
Sbjct: 2 KTSWIKIFFQGMIHLYRWTISPLLGSPCRFFPSCSEYALVALKKHPLKRSLFLIANRLLK 61
Query: 65 CNPFCSGGI-AYPTTRLKRPSLIQSHKDSN 93
C P+ GGI P T ++ ++S D N
Sbjct: 62 CGPWHIGGIDLVPGTSIE--EYLESPDDKN 89
>sp|P45649|YIDD_COXBU Hypothetical 9.9 kDa protein in rnpA 3'region
pir||I40653 9K protein - Coxiella burnetii
gb|AAA56918.1| (U10529) 9 kDa protein [Coxiella burnetii]
Length = 88
Score = 46.6 bits (109), Expect = 5e-05
Identities = 23/67 (34%), Positives = 33/67 (48%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ + I+ Y+ S SSCRFYP+CS YA L + G R+L C+PF
Sbjct: 13 IQTLLLGLIKSYRYLISPVLMSSCRFYPSCSCYAETALKRFGVIKGSGLTVWRLLRCHPF 72
Query: 69 CSGGIAY 75
GG+ +
Sbjct: 73 HPGGVDF 79
>ref|NP_485651.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB77977.1| (AP003586) ORF_ID:asr1611~hypothetical protein [Nostoc sp. PCC
7120]
Length = 84
Score = 46.6 bits (109), Expect = 5e-05
Identities = 25/64 (39%), Positives = 32/64 (49%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ IF I+GY+ F S P +CRF PTCS YA+ + RIL C+PF
Sbjct: 1 MKQIFIWLIKGYRMFISPLYPPTCRFRPTCSMYAIEAIERFGVFRGGWMAIRRILRCHPF 60
Query: 69 CSGG 72
GG
Sbjct: 61 HPGG 64
>ref|NP_637611.1| (NC_003902) alpha-hemolysin [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gb|AAM41535.1| (AE012333) alpha-hemolysin [Xanthomonas campestris pv. campestris
str. ATCC 33913]
Length = 93
Score = 46.2 bits (108), Expect = 7e-05
Identities = 23/64 (35%), Positives = 32/64 (49%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+ + A +R Y+RF S CRF P+CS YA+ + PL A R+ C+PF
Sbjct: 8 IGRLLIALLRFYKRFISPLLGPRCRFAPSCSEYAMTAIARFGPLRGSWLAARRLGRCHPF 67
Query: 69 CSGG 72
GG
Sbjct: 68 HPGG 71
>ref|NP_219386.1| (NC_000919) conserved protein [Treponema pallidum]
Length = 94
Score = 45.4 bits (106), Expect = 1e-04
Identities = 23/63 (36%), Positives = 32/63 (50%)
Query: 10 SAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFC 69
S + A IR YQR S SCR+YP+CS YA + + + R++ C+PF
Sbjct: 12 SGLLLALIRFYQRALSPHLLPSCRYYPSCSQYAYESVRVHGCVWGLFLTVKRVVRCHPFA 71
Query: 70 SGG 72
GG
Sbjct: 72 RGG 74
>ref|NP_518124.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia
solanacearum]
emb|CAD13531.1| (AL646057) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia
solanacearum]
Length = 104
Score = 45.4 bits (106), Expect = 1e-04
Identities = 22/56 (39%), Positives = 29/56 (51%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
+R Y+ FS F + CRF PTCS+YA + P A R+ C+PF GG
Sbjct: 9 LRVYKVAFSPFVGAQCRFLPTCSDYARDAVLTHGPAIGSYLAAKRLCRCHPFAQGG 64
>ref|NP_346305.1| (NC_003028) conserved hypothetical protein [Streptococcus
pneumoniae TIGR4]
gb|AAK75945.1| (AE007478) conserved hypothetical protein [Streptococcus
pneumoniae TIGR4]
Length = 80
Score = 43.9 bits (102), Expect = 3e-04
Identities = 26/67 (38%), Positives = 34/67 (49%), Gaps = 7/67 (10%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLL---CFESPLSAMGKIAIRILSC 65
+ I A +R YQRF S P SCRF TCSNY + + F+ L + RIL C
Sbjct: 1 MKRILIAPVRFYQRFISPVFPPSCRFELTCSNYMIQAIEKHGFKGVLMGLA----RILRC 56
Query: 66 NPFCSGG 72
+P+ G
Sbjct: 57 HPWSKTG 63
>ref|NP_295873.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
sp|Q9RSH4|YL50_DEIRA Hypothetical protein DR2150
pir||A75308 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF11698.1|AE002049_3 (AE002049) conserved hypothetical protein [Deinococcus
radiodurans]
Length = 96
Score = 43.9 bits (102), Expect = 3e-04
Identities = 25/64 (39%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 10 SAIFTASIRGYQRFFSAFTPS-SCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+A ++R YQR S P+ +CRF PTCS YA L L R+L CNP
Sbjct: 3 AAPLVRAVRWYQRVLSPRKPAPTCRFSPTCSEYAAQALDRHGALKGGWLALWRVLRCNPL 62
Query: 69 CSGG 72
GG
Sbjct: 63 VPGG 66
>ref|NP_359280.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAL00491.1| (AE008534) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
Length = 80
Score = 43.5 bits (101), Expect = 4e-04
Identities = 26/67 (38%), Positives = 34/67 (49%), Gaps = 7/67 (10%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLL---CFESPLSAMGKIAIRILSC 65
+ I A +R YQRF S P SCRF TCSNY + + F+ L + RIL C
Sbjct: 1 MKRILIALVRFYQRFISPVFPPSCRFELTCSNYMIQAIEKHGFKGVLMGLA----RILRC 56
Query: 66 NPFCSGG 72
+P+ G
Sbjct: 57 HPWSKTG 63
>ref|NP_218439.1| (NC_000962) hypothetical protein Rv3922c [Mycobacterium
tuberculosis H37Rv]
ref|NP_338593.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
sp|O53600|Y3C2_MYCTU Hypothetical protein Rv3922c
pir||B70852 probable hemolysin - Mycobacterium tuberculosis (strain H37RV)
emb|CAA16235.1| (AL021426) hypothetical protein Rv3922c [Mycobacterium
tuberculosis H37Rv]
gb|AAK48407.1| (AE007194) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 120
Score = 43.5 bits (101), Expect = 4e-04
Identities = 22/56 (39%), Positives = 28/56 (49%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
I+ Y+ S P+SCRF PTCS YA+ L L IR+ C P+ GG
Sbjct: 27 IQVYRHMLSPLRPASCRFVPTCSQYAVDALTEYGLLRGSWLTMIRLAKCGPWHRGG 82
>ref|NP_418160.1| (NC_000913) Uncharacterized conserved protein [Escherichia coli
K12]
ref|NP_462741.1| (NC_003197) putative inner membrane protein [Salmonella
typhimurium LT2]
sp|P22847|YIDD_ECOLI Hypothetical protein yidD
gb|AAL22700.1| (AE008879) putative inner membrane protein [Salmonella
typhimurium LT2]
Length = 85
Score = 43.1 bits (100), Expect = 6e-04
Identities = 23/63 (36%), Positives = 29/63 (45%)
Query: 10 SAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFC 69
S + A IR YQR S CRF PTCS+Y + L + R+L C+P
Sbjct: 9 SRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPLH 68
Query: 70 SGG 72
GG
Sbjct: 69 PGG 71
>sp|Q44066|HLYA_AERHY Putative alpha-hemolysin
gb|AAB81225.1| (L36462) alpha-hemolysin [Aeromonas hydrophila]
Length = 85
Score = 43.1 bits (100), Expect = 6e-04
Identities = 23/63 (36%), Positives = 29/63 (45%)
Query: 10 SAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFC 69
S + A IR YQR S CRF PTCS+Y + L + R+L C+P
Sbjct: 9 SRVLIALIRVYQRLISPLLGPHCRFTPTCSSYGIEALRRFGVIKGSWLTVKRVLKCHPLH 68
Query: 70 SGG 72
GG
Sbjct: 69 PGG 71
>ref|NP_628068.1| (NC_003888) hypothetical protein [Streptomyces coelicolor A3(2)]
sp|O54625|Y2I2_STRCO Hypothetical protein SCO3882
pir||T36569 hypothetical protein SCH24.04 - Streptomyces coelicolor
gb|AAC03488.1| (AF031590) 9-10kDa protein-like [Streptomyces coelicolor A3(2)]
emb|CAB42698.1| (AL049826) hypothetical protein [Streptomyces coelicolor A3(2)]
gb|AAF16009.1|AF187159_9 (AF187159) Orf124 [Streptomyces coelicolor A3(2)]
Length = 124
Score = 43.1 bits (100), Expect = 6e-04
Identities = 24/69 (34%), Positives = 34/69 (48%), Gaps = 1/69 (1%)
Query: 15 ASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGGIA 74
A I+ YQ S C++YP+CS+Y + + A RIL CNP+ GG+
Sbjct: 7 ALIKLYQWTISPLLGPVCKYYPSCSHYGYTAIDRHGAVKGTALTAWRILRCNPWSLGGVD 66
Query: 75 YPTTRLKRP 83
+ R KRP
Sbjct: 67 HVPPR-KRP 74
>sp|P22834|YIDD_PROMI Hypothetical 9.6 kDa protein in rnpA 3'region
pir||JQ0730 9K protein - Proteus mirabilis
gb|AAA83955.1| (M58352) ORF2; 9 kDa protein; putative [Proteus mirabilis]
Length = 86
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/63 (38%), Positives = 28/63 (44%)
Query: 10 SAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFC 69
S I IRGYQ S CRF PTCS+Y + L + RIL C+P
Sbjct: 9 SKILILLIRGYQLGISPLLGPRCRFNPTCSHYGIEALRRFGMIKGSWLTVKRILKCHPLH 68
Query: 70 SGG 72
GG
Sbjct: 69 EGG 71
>ref|NP_642675.1| (NC_003919) alpha-hemolysin [Xanthomonas axonopodis pv. citri
str. 306]
gb|AAM37211.1| (AE011873) alpha-hemolysin [Xanthomonas axonopodis pv. citri str.
306]
Length = 95
Score = 41.6 bits (96), Expect = 0.002
Identities = 22/64 (34%), Positives = 32/64 (49%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPF 68
+S + A +R Y+ S CRF P+CS+YA+ + PL A R+ C+PF
Sbjct: 8 ISRLLIALLRVYKLVISPLLGPRCRFAPSCSDYAMTAIGRFGPLRGSWLAARRLGRCHPF 67
Query: 69 CSGG 72
GG
Sbjct: 68 HPGG 71
>ref|NP_350317.1| (NC_003030) Uncharacterized conserved protein, YidD family
[Clostridium acetobutylicum]
gb|AAK81657.1|AE007868_13 (AE007868) Uncharacterized conserved protein, YidD family
[Clostridium acetobutylicum]
Length = 71
Score = 40.8 bits (94), Expect = 0.003
Identities = 23/62 (37%), Positives = 31/62 (49%), Gaps = 1/62 (1%)
Query: 12 IFTASIRGYQRFFSAFTPSSC-RFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCS 70
I SI+ Y+ + S ++C +F PTCS YA+ + L RIL CNPF
Sbjct: 5 ILLKSIKFYRIYLSPLKRNACCKFIPTCSQYAIDAIEKYGALKGSFMAVKRILRCNPFSK 64
Query: 71 GG 72
GG
Sbjct: 65 GG 66
>sp|O50638|YIDD_LEPIN Hypothetical 8.6 kDa protein
pir||T00123 hypothetical protein 9 - Leptospira interrogans
dbj|BAA24370.1| (AB010203) ORF9; putative [Leptospira interrogans]
Length = 74
Score = 40.8 bits (94), Expect = 0.003
Identities = 22/55 (40%), Positives = 26/55 (47%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSG 71
I+ Y+R S P +CRF PTCS YA A+ RIL CNP G
Sbjct: 9 IQLYKRLLSPLLPPACRFTPTCSEYAAQAFQEYGFFRALQLSIWRILRCNPLSRG 63
>ref|NP_439162.1| (NC_000907) hemolysin, putative [Haemophilus influenzae Rd]
sp|P44972|YIDD_HAEIN Hypothetical protein HI1000
pir||G64163 hypothetical protein HI1000 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC22662.1| (U32781) hemolysin, putative [Haemophilus influenzae Rd]
Length = 86
Score = 40.4 bits (93), Expect = 0.004
Identities = 22/56 (39%), Positives = 27/56 (47%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
IR YQ S F + CRF PTCS Y + L L R+L C+P +GG
Sbjct: 16 IRLYQIMISPFIGARCRFVPTCSCYGIEALKTHGLLKGGWLTLKRVLKCHPLNAGG 71
>ref|NP_250735.1| (NC_002516) conserved hypothetical protein [Pseudomonas
aeruginosa]
sp|Q9I270|YK45_PSEAE Hypothetical protein PA2045
pir||D83389 conserved hypothetical protein PA2045 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG05433.1|AE004631_2 (AE004631) conserved hypothetical protein [Pseudomonas
aeruginosa]
Length = 86
Score = 40.4 bits (93), Expect = 0.004
Identities = 22/56 (39%), Positives = 28/56 (49%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
IR YQ S CRFYP+CS+Y L + L A R+L C+P+ GG
Sbjct: 9 IRFYQYAISPLIGPRCRFYPSCSHYTLEAIRVHGALRGGYLGARRLLRCHPWHPGG 64
>sp|Q9L7M0|YIDD_MYCPA Hypothetical 12.4 kDa protein in rnpA 3'region
gb|AAF33697.1| (AF222789) unknown [Mycobacterium avium subsp. paratuberculosis]
Length = 115
Score = 40.4 bits (93), Expect = 0.004
Identities = 20/56 (35%), Positives = 28/56 (49%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
I+ Y+ S P++CRF PTCS YA+ L + A R+ C P+ GG
Sbjct: 26 IQLYRHMVSPLRPATCRFVPTCSQYAVDALDEYGLIRGSWLAAARLAKCGPWHQGG 81
>ref|NP_283365.1| (NC_003116) hypothetical protein NMA0549 [Neisseria meningitidis
Z2491]
pir||E81973 hypothetical protein NMA0549 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB83842.1| (AL162753) hypothetical protein NMA0549 [Neisseria meningitidis
Z2491]
Length = 96
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/65 (38%), Positives = 32/65 (48%), Gaps = 2/65 (3%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAI-RILSCNP 67
LS + IR YQ S P CR+ PTCS YA+ + G++AI RI C+P
Sbjct: 28 LSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKKYGAFKG-GRLAIKRIARCHP 86
Query: 68 FCSGG 72
F G
Sbjct: 87 FGGHG 91
>ref|NP_102618.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB48404.1| (AP002996) hypothetical protein [Mesorhizobium loti]
Length = 153
Score = 40.0 bits (92), Expect = 0.005
Identities = 22/60 (36%), Positives = 29/60 (47%)
Query: 14 TASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGGI 73
T+ +R YQ S F +SCR PTCS YA + + R+L C PF + GI
Sbjct: 63 TSFVRLYQLTLSGFVGNSCRHLPTCSEYAHEAIARHGLWAGGWMGFFRVLRCGPFGTHGI 122
>ref|NP_274900.1| (NC_003112) conserved hypothetical protein [Neisseria
meningitidis MC58]
sp|Q9JW47|Y549_NEIMA Hypothetical protein NMA0549/NMB1906
pir||A81028 conserved hypothetical protein NMB1906 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF42236.1| (AE002540) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 73
Score = 40.0 bits (92), Expect = 0.005
Identities = 25/65 (38%), Positives = 32/65 (48%), Gaps = 2/65 (3%)
Query: 9 LSAIFTASIRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAI-RILSCNP 67
LS + IR YQ S P CR+ PTCS YA+ + G++AI RI C+P
Sbjct: 5 LSKLLLGLIRFYQYCISPLIPPRCRYTPTCSQYAVEAVKKYGAFKG-GRLAIKRIARCHP 63
Query: 68 FCSGG 72
F G
Sbjct: 64 FGGHG 68
>ref|NP_062589.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
sp|Q9KVY3|Y005_VIBCH Hypothetical protein VC0005
pir||F82375 conserved hypothetical protein VC0005 [imported] - Vibrio
cholerae (group O1 strain N16961)
gb|AAF93183.1| (AE004093) conserved hypothetical protein [Vibrio cholerae]
Length = 85
Score = 39.3 bits (90), Expect = 0.008
Identities = 20/56 (35%), Positives = 26/56 (45%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
++ YQ F S CRF PTCS YA+ L + R+L C+P GG
Sbjct: 16 VKLYQWFISPLIGPRCRFTPTCSTYAIEALRAHGFIKGCWLSTKRLLKCHPLNEGG 71
>ref|NP_442367.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|Q55785|Y331_SYNY3 Hypothetical protein ssl0331
pir||S76591 hypothetical protein - Synechocystis sp. (strain PCC 6803)
dbj|BAA10437.1| (D64002) ORF_ID:ssl0331~hypothetical protein [Synechocystis sp.
PCC 6803]
Length = 79
Score = 39.3 bits (90), Expect = 0.008
Identities = 22/56 (39%), Positives = 26/56 (46%)
Query: 17 IRGYQRFFSAFTPSSCRFYPTCSNYALWLLCFESPLSAMGKIAIRILSCNPFCSGG 72
I+ Y+ S P SCRF PTCS YAL + RIL C+P GG
Sbjct: 10 IKLYRILISPLFPPSCRFQPTCSQYALDAVEIHGVWRGSCLALKRILRCHPLHPGG 65
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.327 0.137 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,311,178
Number of Sequences: 1026957
Number of extensions: 2925566
Number of successful extensions: 5777
Number of sequences better than 1.0e-02: 46
Number of HSP's better than 0.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 5730
Number of HSP's gapped (non-prelim): 46
length of query: 117
length of database: 324,149,939
effective HSP length: 93
effective length of query: 24
effective length of database: 228,642,938
effective search space: 5487430512
effective search space used: 5487430512
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 90 (39.3 bits)