BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646099|ref|NP_208281.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(449 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_208281.1| (NC_000915) conserved hypothetical protein... 868 0.0
ref|NP_224101.1| (NC_000921) putative [Helicobacter pylori ... 834 0.0
ref|NP_281393.1| (NC_002163) putative integral membrane pro... 476 e-133
ref|NP_348050.1| (NC_003030) Uncharacterized CBS domain-con... 357 2e-97
ref|NP_655918.1| (NC_003995) DUF21, Domain of unknown funct... 318 8e-86
ref|NP_388840.1| (NC_000964) similar to hemolysin [Bacillus... 312 5e-84
ref|NP_391008.1| (NC_000964) similar to hypothetical protei... 304 2e-81
ref|NP_465756.1| (NC_003210) similar to unknown proteins [L... 303 4e-81
ref|NP_471665.1| (NC_003212) similar to unknown proteins [L... 301 1e-80
ref|NP_657280.1| (NC_003995) DUF21, Domain of unknown funct... 301 1e-80
ref|NP_388836.1| (NC_000964) similar to hemolysin [Bacillus... 300 2e-80
gb|AAK64446.1|AF377339_7 (AF377339) hemolysin TlyC [Myxococ... 298 7e-80
ref|NP_371226.1| (NC_002758) hypothetical protein [Staphylo... 295 1e-78
ref|NP_390538.1| (NC_000964) similar to hemolysin-like [Bac... 294 1e-78
ref|NP_267991.1| (NC_002662) transport protein [Lactococcus... 294 2e-78
ref|NP_390355.1| (NC_000964) similar to hypothetical protei... 290 3e-77
ref|NP_295899.1| (NC_001263) conserved hypothetical protein... 279 6e-74
ref|NP_395802.1| (NC_002608) Vng6302c [Halobacterium sp. NR... 266 4e-70
ref|NP_254049.1| (NC_002516) conserved hypothetical protein... 243 3e-63
ref|NP_441829.1| (NC_000911) hemolysin [Synechocystis sp. P... 243 4e-63
ref|NP_641874.1| (NC_003919) conserved hypothetical protein... 243 4e-63
ref|NP_489136.1| (NC_003272) hypothetical protein [Nostoc s... 241 1e-62
ref|NP_385771.1| (NC_003047) HYPOTHETICAL TRANSMEMBRANE PRO... 239 4e-62
ref|NP_347100.1| (NC_003030) CBS-domain containing protein,... 238 1e-61
ref|NP_561353.1| (NC_003366) probable hemolysin [Clostridiu... 237 2e-61
ref|NP_489256.1| (NC_003272) probable hemolysin [Nostoc sp.... 231 1e-59
ref|NP_636865.1| (NC_003902) conserved hypothetical protein... 231 2e-59
ref|NP_625718.1| (NC_003888) putative secreted protein. [St... 223 3e-57
ref|NP_471828.1| (NC_003212) similar to conserved hypotheti... 220 2e-56
ref|NP_465922.1| (NC_003210) similar to conserved hypotheti... 218 1e-55
ref|NP_635299.1| (NC_003901) conserved protein [Methanosarc... 216 6e-55
ref|NP_472209.1| (NC_003212) conserved hypothetical protein... 215 1e-54
ref|NP_466260.1| (NC_003210) conserved hypothetical protein... 213 5e-54
ref|NP_051658.1| (NC_000958) hemolysin, putative [Deinococc... 212 6e-54
ref|NP_627955.1| (NC_003888) putative integral membrane pro... 209 7e-53
ref|NP_600666.1| (NC_003450) COG1253:Hemolysins and related... 207 3e-52
ref|NP_560946.1| (NC_003366) probable hemolysin-related pro... 205 1e-51
ref|NP_661441.1| (NC_002932) CBS domain protein [Chlorobium... 198 9e-50
ref|NP_624578.1| (NC_003888) putative integral membrane pro... 198 1e-49
ref|NP_051659.1| (NC_000958) hemolysin, putative [Deinococc... 197 2e-49
ref|NP_419183.1| (NC_002696) CBS domain protein [Caulobacte... 196 5e-49
ref|NP_625539.1| (NC_003888) putative integral membrane pro... 196 6e-49
ref|NP_267971.1| (NC_002662) transport protein [Lactococcus... 191 2e-47
ref|NP_298569.1| (NC_002488) conserved hypothetical protein... 191 2e-47
ref|NP_228654.1| (NC_000853) hemolysin-related protein [The... 191 2e-47
ref|NP_662876.1| (NC_002932) CBS domain protein [Chlorobium... 189 8e-47
ref|NP_637059.1| (NC_003902) hemolysin [Xanthomonas campest... 186 6e-46
ref|NP_642040.1| (NC_003919) hemolysin [Xanthomonas axonopo... 185 8e-46
ref|NP_280939.1| (NC_002607) hemolysin protein; Hlp [Haloba... 185 8e-46
ref|NP_103889.1| (NC_002678) hypothetical protein [Mesorhiz... 184 1e-45
ref|NP_356888.1| (NC_003063) AGR_L_2203p [Agrobacterium tum... 184 2e-45
ref|NP_216358.1| (NC_000962) hypothetical protein Rv1842c [... 184 2e-45
ref|NP_534226.1| (NC_003305) hemolysin [Agrobacterium tumef... 183 3e-45
ref|NP_604380.1| (NC_003454) Integral membrane protein with... 182 5e-45
gb|AAC05772.1| (AF051356) putative hemolysin [Streptococcus... 181 2e-44
gb|AAG02152.1|AF212041_8 (AF212041) TlyC; hemolysin [Zymomo... 179 6e-44
ref|NP_336347.1| (NC_002755) CBS domain protein [Mycobacter... 178 1e-43
ref|NP_386781.1| (NC_003047) HYPOTHETICAL TRANSMEMBRANE PRO... 176 5e-43
ref|NP_246616.1| (NC_002663) unknown [Pasteurella multocida... 176 5e-43
ref|NP_268699.1| (NC_002737) putative hemolysin [Streptococ... 174 1e-42
ref|NP_606671.1| (NC_003485) putative hemolysin [Streptococ... 174 1e-42
ref|NP_346390.1| (NC_003028) CBS domain protein [Streptococ... 172 9e-42
ref|NP_359370.1| (NC_003098) Hemolysin [Streptococcus pneum... 171 1e-41
ref|NP_458844.1| (NC_003198) putative membrane protein [Sal... 170 3e-41
ref|NP_600420.1| (NC_003450) COG1253:Hemolysins and related... 168 1e-40
ref|NP_406985.1| (NC_003143) putative membrane protein [Yer... 167 2e-40
ref|NP_625717.1| (NC_003888) putative integral membrane pro... 167 3e-40
ref|NP_214453.1| (NC_000918) hemolysin homolog protein [Aqu... 166 5e-40
ref|NP_421811.1| (NC_002696) CBS domain protein [Caulobacte... 166 7e-40
ref|NP_625540.1| (NC_003888) putative integral membrane pro... 162 8e-39
ref|NP_290850.1| (NC_002655) putative transport protein [Es... 162 1e-38
ref|NP_336346.1| (NC_002755) CBS domain protein [Mycobacter... 161 2e-38
emb|CAC35699.1| (AJ301559) hypothetical protein [Rhodococcu... 160 2e-38
ref|NP_216357.1| (NC_000962) hypothetical protein Rv1841c [... 160 2e-38
ref|NP_627954.1| (NC_003888) putative integral membrane pro... 160 3e-38
ref|NP_538962.1| (NC_003317) CBS domain containing protein ... 160 4e-38
ref|NP_600665.1| (NC_003450) COG1253:Hemolysins and related... 159 8e-38
ref|NP_438613.1| (NC_000907) conserved hypothetical protein... 158 1e-37
ref|NP_175989.1| (NM_104471) unknown protein [Arabidopsis t... 157 2e-37
gb|AAF79321.1|AC002304_14 (AC002304) F14J16.20 [Arabidopsis... 157 2e-37
ref|NP_221062.1| (NC_000963) unknown [Rickettsia prowazekii... 157 2e-37
ref|NP_360716.1| (NC_003103) hemolysin homolog [Rickettsia ... 156 5e-37
ref|NP_219086.1| (NC_000919) hemolysin (tlyC) [Treponema pa... 155 7e-37
ref|NP_187914.1| (NM_112146) hemolysin-like protein [Arabid... 155 9e-37
ref|NP_216882.1| (NC_000962) hypothetical protein Rv2366c [... 154 3e-36
ref|NP_233223.1| (NC_002506) hemolysin, putative [Vibrio ch... 151 1e-35
ref|NP_336915.1| (NC_002755) CBS domain protein [Mycobacter... 151 2e-35
ref|NP_212336.1| (NC_001318) hemolysin, putative [Borrelia ... 149 5e-35
ref|NP_520398.1| (NC_003295) PROBABLE TRANSMEMBRANE PROTEIN... 149 7e-35
ref|NP_286383.1| (NC_002655) putative transport protein [Es... 148 1e-34
ref|NP_656152.1| (NC_003995) DUF21, Domain of unknown funct... 147 2e-34
ref|NP_455236.1| (NC_003198) haemolysin-related protein [Sa... 146 4e-34
gb|AAD09823.1| (AF116773) magnesium efflux protein CorC [Sa... 146 4e-34
ref|NP_212193.1| (NC_001318) hemolysin (tlyC) [Borrelia bur... 146 4e-34
sp|Q54318|HLYC_TREHY Hemolysin C >gi|11278538|pir||T46749 h... 145 7e-34
ref|NP_656153.1| (NC_003995) hypothetical protein predicted... 145 7e-34
ref|NP_624577.1| (NC_003888) putative integral membrane pro... 145 1e-33
ref|NP_406143.1| (NC_003143) putative membrane protein [Yer... 145 1e-33
ref|NP_654551.1| (NC_003995) CBS, CBS domain [Bacillus anth... 144 2e-33
ref|NP_438468.1| (NC_000907) hemolysin, putative [Haemophil... 143 4e-33
ref|NP_246122.1| (NC_002663) unknown [Pasteurella multocida... 143 4e-33
ref|NP_601486.1| (NC_003450) COG1253:Hemolysins and related... 142 8e-33
gb|AAC36474.1| (AF085347) integral membrane protein CorC [S... 142 8e-33
ref|NP_230606.1| (NC_002505) hemolysin, putative [Vibrio ch... 142 1e-32
ref|NP_518649.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 141 2e-32
ref|NP_245970.1| (NC_002663) unknown [Pasteurella multocida... 141 2e-32
ref|NP_645619.1| (NC_003923) ORFID:MW0802~hypothetical prot... 140 2e-32
ref|NP_240255.1| (NC_002528) hypothetical protein [Buchnera... 140 4e-32
ref|NP_371443.1| (NC_002758) hypothetical protein [Staphylo... 140 4e-32
gb|AAG00559.2|AF287009_4 (AF287009) GldE [Flavobacterium jo... 140 4e-32
ref|NP_230209.1| (NC_002505) hemolysin, putative [Vibrio ch... 139 7e-32
sp|Q57017|YFJD_HAEIN Hypothetical protein HI0107 139 9e-32
ref|NP_273582.1| (NC_003112) conserved hypothetical protein... 137 2e-31
dbj|BAA35309.1| (D90705) Hemolysin (tlyC) homolog [Escheric... 137 2e-31
ref|NP_283515.1| (NC_003116) hypothetical protein NMA0716 [... 137 2e-31
ref|NP_417103.1| (NC_000913) Uncharacterized CBS domain-con... 137 3e-31
ref|NP_660760.1| (NC_004061) hypothetical 33.3 kD protein i... 137 3e-31
ref|NP_457149.1| (NC_003198) putative membrane protein [Sal... 137 3e-31
ref|NP_438281.1| (NC_000907) conserved hypothetical protein... 136 4e-31
sp|P37908|YFJD_ECOLI Hypothetical protein yfjD 136 6e-31
ref|NP_289165.1| (NC_002655) Uncharacterized CBS domain-con... 135 8e-31
ref|NP_406764.1| (NC_003143) putative membrane protein [Yer... 133 5e-30
dbj|BAA16497.1| (D90888) similar to [SwissProt Accession Nu... 132 6e-30
ref|NP_279557.1| (NC_002607) Vng0505c [Halobacterium sp. NR... 132 8e-30
ref|NP_213066.1| (NC_000918) hemolysin [Aquifex aeolicus] >... 130 4e-29
ref|NP_104648.1| (NC_002678) hypothetical protein [Mesorhiz... 130 4e-29
ref|NP_484353.1| (NC_003272) hypothetical protein [Nostoc s... 129 5e-29
ref|NP_252672.1| (NC_002516) conserved hypothetical protein... 129 7e-29
ref|NP_224706.1| (NC_000922) CBS Domains (Hemolysin homolog... 126 6e-28
ref|NP_418873.1| (NC_002696) CBS domain protein [Caulobacte... 124 2e-27
ref|NP_384514.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhiz... 124 2e-27
ref|NP_297080.1| (NC_002620) hemolysin, putative [Chlamydia... 124 2e-27
ref|NP_531065.1| (NC_003304) hemolysin [Agrobacterium tumef... 124 3e-27
ref|NP_353391.1| (NC_003062) AGR_C_627p [Agrobacterium tume... 124 3e-27
ref|NP_218467.1| (NC_000919) hemolysin, putative [Treponema... 124 3e-27
dbj|BAA12353.1| (D84432) YrkA [Bacillus subtilis] 123 4e-27
gb|AAM75363.1|AF521648_3 (AF521648) hemolysin-like protein ... 123 5e-27
ref|NP_360778.1| (NC_003103) hemolysin C [Rickettsia conori... 123 5e-27
ref|NP_298191.1| (NC_002488) polar amino acid transporter [... 122 7e-27
ref|NP_252437.1| (NC_002516) conserved hypothetical protein... 122 9e-27
ref|NP_219935.1| (NC_000117) (CBS Domain) [Chlamydia tracho... 122 9e-27
gb|AAC62436.1| (U97482) hemolysin [Rickettsia typhi] 122 9e-27
ref|NP_311502.1| (NC_002695) hypothetical protein [Escheric... 122 1e-26
ref|NP_642781.1| (NC_003919) polar amino acid transporter [... 121 1e-26
gb|EAA02505.1| (AAAB01004957) ebiP48 [Anopheles gambiae str... 121 1e-26
ref|NP_106186.1| (NC_002678) hemolysin [Mesorhizobium loti]... 121 1e-26
ref|NP_221092.1| (NC_000963) HEMOLYSIN C (tlyC) [Rickettsia... 121 1e-26
gb|AAK95613.1|AF401230_3 (AF401230) putative hemolysin [Vib... 120 3e-26
ref|NP_637687.1| (NC_003902) polar amino acid transporter [... 120 3e-26
ref|NP_072808.1| (NC_000908) conserved hypothetical protein... 118 2e-25
ref|NP_540890.1| (NC_003317) CBS domain containing protein ... 117 2e-25
ref|NP_520945.1| (NC_003295) PROBABLE TRANSMEMBRANE PROTEIN... 117 4e-25
ref|NP_522733.1| (NC_003296) PROBABLE TRANSMEMBRANE PROTEIN... 116 5e-25
ref|NP_109847.1| (NC_000912) tlyC homolog, hemolysin activi... 114 2e-24
ref|NP_300451.1| (NC_002491) CBS domain protein [Chlamydoph... 114 2e-24
ref|NP_224594.1| (NC_000922) CBS Domain protein (Hemolysin ... 114 2e-24
ref|NP_441476.1| (NC_000911) hemolysin [Synechocystis sp. P... 112 1e-23
ref|NP_405113.1| (NC_003143) putative membrane protein [Yer... 111 2e-23
ref|NP_356300.1| (NC_003063) AGR_L_1024p [Agrobacterium tum... 109 8e-23
ref|NP_600419.1| (NC_003450) COG1253:Hemolysins and related... 106 5e-22
ref|NP_326345.1| (NC_002771) HEMOLYSIN C [Mycoplasma pulmon... 105 8e-22
ref|NP_077902.1| (NC_002162) hemolysin [Ureaplasma urealyti... 104 2e-21
ref|NP_250022.1| (NC_002516) conserved hypothetical protein... 101 2e-20
emb|CAA10144.1| (AJ012716) hypothetical protein [Erwinia ch... 101 2e-20
ref|NP_296904.1| (NC_002620) conserved hypothetical protein... 100 3e-20
ref|NP_274493.1| (NC_003112) conserved hypothetical protein... 100 4e-20
ref|NP_284409.1| (NC_003116) conserved hypothetical integra... 100 5e-20
ref|NP_461064.1| (NC_003197) putative inner membrane protei... 99 1e-19
sp|P76389|YEGH_ECOLI Hypothetical protein yegH 98 2e-19
dbj|BAA15916.1| (D90844) ORF_ID:o355#2; similar to [SwissPr... 98 2e-19
ref|NP_416567.1| (NC_000913) putative transport protein [Es... 98 2e-19
ref|NP_660657.1| (NC_004061) hypothetical 56.5 kD protein i... 97 4e-19
ref|NP_310895.1| (NC_002695) putative transport protein [Es... 97 4e-19
ref|NP_456665.1| (NC_003198) putative membrane protein [Sal... 97 5e-19
ref|NP_288569.1| (NC_002655) putative transport protein [Es... 96 7e-19
ref|NP_240145.1| (NC_002528) hypothetical protein [Buchnera... 96 7e-19
ref|NP_539588.1| (NC_003317) INTEGRAL MEMBRANE PROTEIN / HE... 95 2e-18
ref|NP_405328.1| (NC_003143) putative membrane protein [Yer... 91 2e-17
ref|NP_218468.1| (NC_000919) hemolysin, putative [Treponema... 91 4e-17
sp|Q48445|YC19_KLEPN Hypothetical protein in CPS region (OR... 90 5e-17
ref|NP_219761.1| (NC_000117) Hypothetical protein containin... 85 2e-15
ref|NP_456335.1| (NC_003198) putative membrane protein [Sal... 80 4e-14
gb|AAD31439.1|AF130857_3 (AF130857) CorB [Salmonella typhim... 80 6e-14
pir||H65039 hypothetical protein in grpE 3' region - Escher... 79 1e-13
gb|AAG57723.1|AE005491_3 (AE005491) putative transport prot... 78 2e-13
ref|NP_310552.1| (NC_002695) putative transport protein [Es... 78 2e-13
ref|NP_288252.1| (NC_002655) putative transport protein [Es... 77 3e-13
ref|NP_229927.1| (NC_002505) conserved hypothetical protein... 77 3e-13
gb|AAF33142.1|AF196836_1 (AF196836) putative hemolysin [Can... 77 5e-13
ref|NP_296905.1| (NC_002620) conserved hypothetical protein... 76 9e-13
ref|NP_460784.1| (NC_003197) putative inner membrane protei... 75 1e-12
ref|NP_224595.1| (NC_000922) CT257 hypothetical protein [Ch... 70 4e-11
ref|NP_014581.1| (NC_001147) Product of gene unknown; Mam3p... 69 1e-10
ref|NP_503052.1| (NM_070651) C52D10.12.p [Caenorhabditis el... 69 1e-10
ref|NP_219372.1| (NC_000919) hemolysin, putative [Treponema... 67 3e-10
pir||G65039 hypothetical protein b2612 - Escherichia coli (... 67 4e-10
ref|NP_219762.1| (NC_000117) hypothetical protein [Chlamydi... 64 3e-09
ref|NP_588087.1| (NC_003421) conserved hypothetical protein... 62 1e-08
ref|NP_060119.2| (NM_017649) ancient conserved domain prote... 62 2e-08
dbj|BAB14585.1| (AK023479) unnamed protein product [Homo sa... 62 2e-08
ref|XP_031972.2| (XM_031972) ancient conserved domain prote... 62 2e-08
ref|NP_291047.1| (NM_033569) cyclin M2; ancient conserved d... 62 2e-08
dbj|BAB14386.1| (AK023066) unnamed protein product [Homo sa... 61 2e-08
gb|AAD31438.1|AF130857_2 (AF130857) CorF [Salmonella typhim... 59 1e-07
ref|NP_171826.1| (NM_100209) unknown protein [Arabidopsis t... 57 3e-07
dbj|BAB13418.1| (AB046812) KIAA1592 protein [Homo sapiens] 55 1e-06
gb|AAL91640.1| (AY075631) At1g47330/T3F24_2 [Arabidopsis th... 55 1e-06
ref|NP_064569.1| (NM_020184) ancient conserved domain prote... 55 2e-06
ref|NP_195096.1| (NM_119528) putative protein [Arabidopsis ... 54 3e-06
gb|AAL36056.1| (AY064150) AT4g33700/T16L1_190 [Arabidopsis ... 54 4e-06
ref|NP_291048.1| (NM_033570) ancient conserved domain prote... 54 5e-06
ref|NP_179058.1| (NM_127015) hypothetical protein [Arabidop... 54 5e-06
ref|NP_200091.1| (NM_124657) putative protein [Arabidopsis ... 53 8e-06
ref|NP_113573.1| (NM_031396) cyclin M1; ancient conserved d... 52 2e-05
ref|NP_065081.1| (NM_020348) cyclin M1; ancient conserved d... 52 2e-05
emb|CAC35698.1| (AJ301559) hypothetical protein [Rhodococcu... 50 5e-05
ref|NP_508521.1| (NM_076120) C33D12.2.p [Caenorhabditis ele... 48 2e-04
gb|AAG46066.1|AC079830_6 (AC079830) putative ancient conser... 48 2e-04
pir||T42414 conserved hypothetical protein - fission yeast ... 47 4e-04
ref|NP_497773.1| (NM_065372) R13G10.4.p [Caenorhabditis ele... 46 0.001
ref|NP_509493.1| (NM_077092) R04E5.2.p [Caenorhabditis eleg... 45 0.001
pir||T28874 hypothetical protein R04E5.2 - Caenorhabditis e... 45 0.001
dbj|BAA90926.1| (AK000071) unnamed protein product [Homo sa... 45 0.002
ref|NP_613810.1| (NC_003551) CBS-domain-containing protein ... 45 0.002
ref|NP_280824.1| (NC_002607) Vng2168c [Halobacterium sp. NR... 45 0.002
gb|AAA92086.1| (U31567) similar to the inosine monophosphat... 45 0.002
ref|NP_269462.1| (NC_002737) conserved hypothetical protein... 44 0.005
gb|AAH21222.1|AAH21222 (BC021222) Similar to cyclin M2 [Hom... 44 0.005
ref|NP_247366.1| (NC_000909) conserved hypothetical protein... 44 0.005
ref|NP_578014.1| (NC_003413) inosine-5'-monophosphate dehyd... 43 0.007
ref|NP_607464.1| (NC_003485) conserved hypothetical protein... 43 0.009
>ref|NP_208281.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
pir||B64706 hemolysin - Helicobacter pylori (strain 26695)
gb|AAD08525.1| (AE000647) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 449
Score = 868 bits (2242), Expect = 0.0
Identities = 449/449 (100%), Positives = 449/449 (100%)
Query: 1 MGRNQGAYLDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLA 60
MGRNQGAYLDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLA
Sbjct: 1 MGRNQGAYLDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLA 60
Query: 61 LKMSQRLDTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVI 120
LKMSQRLDTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVI
Sbjct: 61 LKMSQRLDTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVI 120
Query: 121 AFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKK 180
AFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKK
Sbjct: 121 AFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKK 180
Query: 181 MGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMV 240
MGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNA DFSDTSAKEIMTPRKDMV
Sbjct: 181 MGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMV 240
Query: 241 CLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVR 300
CLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVR
Sbjct: 241 CLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVR 300
Query: 301 KMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ 360
KMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ
Sbjct: 301 KMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ 360
Query: 361 EGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSH 420
EGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSH
Sbjct: 361 EGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSH 420
Query: 421 GYSFEVLSVDGARIKRLKAVKQDQGENEA 449
GYSFEVLSVDGARIKRLKAVKQDQGENEA
Sbjct: 421 GYSFEVLSVDGARIKRLKAVKQDQGENEA 449
>ref|NP_224101.1| (NC_000921) putative [Helicobacter pylori J99]
pir||B71816 hypothetical protein jhp1383 - Helicobacter pylori (strain J99)
gb|AAD06954.1| (AE001560) putative [Helicobacter pylori J99]
Length = 441
Score = 834 bits (2154), Expect = 0.0
Identities = 428/441 (97%), Positives = 436/441 (98%)
Query: 9 LDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLD 68
+DPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLAL+MSQRLD
Sbjct: 1 MDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALEMSQRLD 60
Query: 69 TYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFL 128
TYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFL
Sbjct: 61 TYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFL 120
Query: 129 HVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH 188
HVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMG+NPKEH
Sbjct: 121 HVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGVNPKEH 180
Query: 189 DGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSY 248
+G HSEEELKIIVGESLREGIIDSVEGEIIKNA DFSDTSAKEIMTPRKDMVCLDEENSY
Sbjct: 181 EGMHSEEELKIIVGESLREGIIDSVEGEIIKNAVDFSDTSAKEIMTPRKDMVCLDEENSY 240
Query: 249 EENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPES 308
EENIDIVLK HFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDF QIVRKMIIVPES
Sbjct: 241 EENIDIVLKSHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFKQIVRKMIIVPES 300
Query: 309 ASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEE 368
ASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG+NKLEE
Sbjct: 301 ASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGVNKLEE 360
Query: 369 GVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLS 428
GVFELEGMLDLESVEE LHI+FDKECEQVTLGGYVFSLLERMP+EGDTIVSHGY+FEVLS
Sbjct: 361 GVFELEGMLDLESVEEVLHIQFDKECEQVTLGGYVFSLLERMPIEGDTIVSHGYAFEVLS 420
Query: 429 VDGARIKRLKAVKQDQGENEA 449
VDGARIKRLKAVKQDQGENEA
Sbjct: 421 VDGARIKRLKAVKQDQGENEA 441
>ref|NP_281393.1| (NC_002163) putative integral membrane protein with haemolysin
domain [Campylobacter jejuni]
pir||F81436 probable integral membrane protein with hemeolysin domain Cj0183
[imported] - Campylobacter jejuni (strain NCTC 11168)
emb|CAB72666.1| (AL139074) putative integral membrane protein with haemolysin
domain [Campylobacter jejuni]
Length = 452
Score = 476 bits (1224), Expect = e-133
Identities = 244/449 (54%), Positives = 331/449 (73%), Gaps = 6/449 (1%)
Query: 1 MGRNQGAYLDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLA 60
+ + A D SILM++VA LV LN FFVLSEF++VKVR+++LEE+VK + AK A
Sbjct: 9 LNQTSTASFDAGYSILMVVVALALVFLNGFFVLSEFSIVKVRRSKLEEMVKEKKAGAKKA 68
Query: 61 LKMSQRLDTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVI 120
L+++ RLDTYLSA QLGITLSSLALGW+GEPAIAK+L ++L + + IH+M+ +I
Sbjct: 69 LEVTSRLDTYLSACQLGITLSSLALGWIGEPAIAKMLE--IPLINLGFSTVIIHTMAFII 126
Query: 121 AFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKK 180
AF IT LHVVLGE+VPKS+AIA ++KA LF ARPLH FW++F P +++FD +A LK
Sbjct: 127 AFSIITLLHVVLGELVPKSIAIAVADKAVLFIARPLHWFWMLFLPCIKIFDFLAAISLKL 186
Query: 181 MGINP-KEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDM 239
GI P KE + THSEEE+KII ES + G++D E EII+NA DFSDT AKEIMTPRKDM
Sbjct: 187 FGIKPAKESELTHSEEEIKIIASESQKGGVLDEFETEIIRNAVDFSDTVAKEIMTPRKDM 246
Query: 240 VCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIV 299
+CL+++ SYEEN+ I+ + TR+PY GSKD I+GM+HIRD++ + K + + V
Sbjct: 247 ICLNKQKSYEENMQIICEHKHTRFPYIDGSKDTILGMIHIRDIIQNEL-NHKSQNLDTFV 305
Query: 300 RKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLK 359
+ +I+VPE+ SIS++L+ M KE+ HTALV+DEYGGTAG+LTMEDI+EEI+GEI E++
Sbjct: 306 KPLILVPENISISKVLVMMNKERSHTALVVDEYGGTAGILTMEDIMEEIIGEIKSEHE-- 363
Query: 360 QEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVS 419
++ KL E ++E +G D+E+VEE L I +D++ EQVT+GGYVF+LL R+PM GD I
Sbjct: 364 EDSYKKLAENIYEFQGRCDIETVEEMLVINYDEDLEQVTIGGYVFNLLGRLPMVGDRIED 423
Query: 420 HGYSFEVLSVDGARIKRLKAVKQDQGENE 448
+EV +DG I+R+K VK+ + E
Sbjct: 424 ELCYYEVKKMDGNSIERVKVVKKTNKDEE 452
>ref|NP_348050.1| (NC_003030) Uncharacterized CBS domain-containing protein, YUGS
B.subtilis ortholog [Clostridium acetobutylicum]
gb|AAK79390.1|AE007653_11 (AE007653) Uncharacterized CBS domain-containing protein, YUGS
B.subtilis ortholog [Clostridium acetobutylicum]
Length = 428
Score = 357 bits (915), Expect = 2e-97
Identities = 186/426 (43%), Positives = 281/426 (65%), Gaps = 5/426 (1%)
Query: 13 ESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLS 72
+++L +++ LLV +NAFFV +EF++VK+RK+R+E LV G+ NAK AL + L++YLS
Sbjct: 2 DNLLNIVIILLLVFMNAFFVAAEFSMVKIRKSRIETLVLDGDKNAKYALGVINNLNSYLS 61
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
A QLGITL+SL LGWVGEPA++K+L+ LF + + + I S+SVV+ F+ IT H+VL
Sbjct: 62 ACQLGITLASLGLGWVGEPAVSKMLSPLFNLLKIPKQ--IIGSISVVVGFIIITGFHIVL 119
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGT 191
GE+ PKS+AI +E A PL +F+ YP++ F+ LK GI EH+
Sbjct: 120 GELAPKSVAILNTESIAKATAIPLTLFYKFTYPIIVAFNKSTDLVLKLFGIKQVDEHEEA 179
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
H++EE++++V ES + G+ID E + N DFS+ + KEIM PR DM C+ E+S+++
Sbjct: 180 HTDEEIRMLVEESYKHGLIDKTELTFVDNVFDFSEKTVKEIMVPRTDMKCIFVEDSFDDI 239
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
+ + + HFTRYP C+ SKDNIIG++HI+DL I + I+R++ VPES SI
Sbjct: 240 VGVTIDEHFTRYPVCEESKDNIIGLIHIKDLYKLKI-NKEDEKIESIIREIKFVPESMSI 298
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVF 371
S++ +KE++ A+VIDEYGGT GL+T+EDI+EEI+GEI DE+D + E I K E G +
Sbjct: 299 SELFRMFQKERMQMAIVIDEYGGTFGLVTIEDILEEIVGEIQDEFDEEMEEIIKTENGSY 358
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
++G + +E + E L IE +E T+GG+++S L++ P + I Y F +L D
Sbjct: 359 VVDGKVLIEDINELLDIEIYEE-NIDTIGGWIYSKLKKYPKTNEKINYGNYQFIILKCDR 417
Query: 432 ARIKRL 437
RI+++
Sbjct: 418 RRIEKI 423
>ref|NP_655918.1| (NC_003995) DUF21, Domain of unknown function DUF21 [Bacillus
anthracis A2012] [Bacillus anthracis str. A2012]
Length = 409
Score = 318 bits (815), Expect = 8e-86
Identities = 178/416 (42%), Positives = 260/416 (61%), Gaps = 18/416 (4%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
IL + + F+L+L++ FFV SEFA+VKVRK+R+++L GN A A + LD YLSA
Sbjct: 3 ILNIFLIFVLILISGFFVASEFAVVKVRKSRIDQLANEGNKQALAARSVISNLDVYLSAC 62
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGIT++SL LGW+GEP + LL LFE +++ +++S +IAF ITF HVVLGE
Sbjct: 63 QLGITITSLGLGWLGEPTVEHLLRPLFEKINITGT--MANTLSFIIAFSVITFFHVVLGE 120
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGTHS 193
+VPKS AI K+E TL ARPL +F + YP + L + A FF K +G+ P KE++ HS
Sbjct: 121 LVPKSFAIQKAEAITLKFARPLILFDKIMYPFIWLLNSTAIFFTKLLGLEPAKENELAHS 180
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EEEL++I+GES + G I+ E + + N +F D AKEIM PR +M+CL EN+ EEN+D
Sbjct: 181 EEELRLILGESFKSGEINQTEYKYVNNIFEFDDRVAKEIMVPRTEMICLSTENTLEENMD 240
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLL---SRSIFTPKMHDFNQIVRKMIIVPESAS 310
IV +TRYP + KD+IIGM++ +++ ++ I P + ++ V E+
Sbjct: 241 IVATEKYTRYPIIEKDKDDIIGMINTKEVFHDQTKGIHKP----LESYIHPVLTVFETVP 296
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG-INKLEEG 369
I + L+ ++K ++ +V+DEYGGTAGLLTMEDI+EEI+GEI DE+D + I K
Sbjct: 297 IRKTLVHLQKNRVQMGIVMDEYGGTAGLLTMEDILEEIIGEIQDEFDADESPMIEKRTPK 356
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFE 425
+ L+G + + V + + D E + T+GG++ S D + GYS E
Sbjct: 357 LTVLDGKVLISEVNDMFGLHID-ESDLDTIGGWLLS------QAVDVNIEAGYSIE 405
>ref|NP_388840.1| (NC_000964) similar to hemolysin [Bacillus subtilis]
sp|O07589|YHDT_BACSU Hypothetical protein yhdT
pir||B69827 hemolysin homolog yhdT - Bacillus subtilis
emb|CAA74504.1| (Y14082) hypothetical protein [Bacillus subtilis]
emb|CAB12798.1| (Z99109) similar to hemolysin [Bacillus subtilis]
Length = 461
Score = 312 bits (800), Expect = 5e-84
Identities = 176/444 (39%), Positives = 288/444 (64%), Gaps = 17/444 (3%)
Query: 9 LDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLD 68
+D +S++++ V L+ L AFFV SEFA+V+VR++R+++L+ GN A LA ++ LD
Sbjct: 1 MDDIDSLILIGV---LIALTAFFVASEFAIVRVRRSRIDQLITEGNKRAILARRVITDLD 57
Query: 69 TYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFL 128
YLSA+QLGITL+S+ LG +GEPA +LL LFE + L ++ H++S +A+ ITFL
Sbjct: 58 EYLSASQLGITLTSIGLGVLGEPAFERLLHPLFEPLGLPDS--VSHAVSFAVAYGLITFL 115
Query: 129 HVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KE 187
HVV+GE+ PK++AI K+E+ TL A PL +F+++ +P + + + A G+ P E
Sbjct: 116 HVVVGELAPKTVAIQKAEQLTLLIAGPLRLFYLLLFPFIWILNGSARLLCGMFGLKPASE 175
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
HDG+HSEEEL++++ ESL+ G I+ E + + +F + AKEIM PRK+M + E +
Sbjct: 176 HDGSHSEEELRMLLSESLKNGEINPSEYKYVNKIFEFDNRIAKEIMIPRKEMAAVSTEMT 235
Query: 248 YEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMH----DFNQIVRKMI 303
E ++++LK +TR+P G KD+++G+V+ + L S +F + + VR +I
Sbjct: 236 MAEMLEVMLKEKYTRWPVTDGDKDSVLGLVNTKHLFSDLLFMTEEERMKMTIHPYVRPVI 295
Query: 304 IVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL-KQEG 362
V E+ + +LIKM++E+IH A++ DEYGGT+GL+T EDI+EEI+GEI DE+D +Q
Sbjct: 296 EVIETIPVHDLLIKMQRERIHMAILSDEYGGTSGLVTTEDILEEIVGEIRDEFDEDEQPL 355
Query: 363 INKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME-GDTIVSHG 421
I KL +G + ++G + ++ V L ++ + T+GG + L E + +E G++I
Sbjct: 356 IQKLGDGHYVMDGKVRIDQVNSLLGASIQEDVD--TIGGLI--LKENIDIEAGESIRIGS 411
Query: 422 YSFEVLSVDGARIKRLKAVKQDQG 445
Y+ +VL +DG IK++ +K++ G
Sbjct: 412 YTIKVLKMDGRLIKQID-IKEEAG 434
>ref|NP_391008.1| (NC_000964) similar to hypothetical proteins from B. subtilis
[Bacillus subtilis]
sp|O05241|YUGS_BACSU Hypothetical protein yugS
pir||G70011 conserved hypothetical protein yugS - Bacillus subtilis
emb|CAB07925.1| (Z93935) unknown [Bacillus subtilis]
emb|CAB15119.1| (Z99120) similar to hypothetical proteins from B. subtilis
[Bacillus subtilis]
Length = 434
Score = 304 bits (778), Expect = 2e-81
Identities = 171/432 (39%), Positives = 273/432 (62%), Gaps = 9/432 (2%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
IL L+ F+L+ + A FV +EFA+VK+R +++ +L++ G+S A A K+ LD YLSA
Sbjct: 8 ILQLIAIFVLIGITAVFVAAEFAIVKIRGSKINQLIESGDSRALAAHKIISNLDEYLSAC 67
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGIT+++L LGW+GEP + L LF + E F H ++ V+AF+ +TFLHVV+GE
Sbjct: 68 QLGITITALGLGWLGEPTFERFLHPLFTMTGIPEP--FNHIVTFVVAFIIVTFLHVVMGE 125
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGTHS 193
+ PK+++I K+E +L+ A+PL F+ + YP ++ + A F +K G + KEH S
Sbjct: 126 LAPKTVSIQKAEAVSLWIAKPLIWFYKITYPFIKALNGSASFLVKLFGFHSVKEHQVVIS 185
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EEEL++I+ ES +G I+ E + +F + A+EIM PR ++ + E S EE I
Sbjct: 186 EEELRLILSESYEKGEINQSEFRYVNKIFEFDNRVAREIMIPRTEIAVISLEQSLEEAIH 245
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
++ +TRYP K KD+I+G+++ +D+ ++ F + NQI+R +I V ES + Q
Sbjct: 246 HIINERYTRYPVIKDDKDHILGIINSKDMF-KAYFLGQPIKLNQIMRPVIRVIESIPVQQ 304
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKLEEGVFE 372
+LI+M+KE+IH A+++DEYGGTAGL+T+EDIIEEI+GEI DEYD + I K E +
Sbjct: 305 LLIRMQKERIHMAILVDEYGGTAGLVTVEDIIEEIVGEIRDEYDQDETPHILKKGEHHYV 364
Query: 373 LEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME-GDTIVSHGYSFEVLSVDG 431
++G ++ V + L I + E E T+ G++ L ++M ++ GD I + G F++L +
Sbjct: 365 MDGKALIDEVNDLLDIAIENE-EIDTIAGWL--LTQKMELKAGDVIHAEGCEFKILDAED 421
Query: 432 ARIKRLKAVKQD 443
I+ ++ K D
Sbjct: 422 HHIRFVEIKKTD 433
>ref|NP_465756.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes
EGD-e]
emb|CAD00310.1| (AL591982) similar to unknown proteins [Listeria monocytogenes]
Length = 434
Score = 303 bits (775), Expect = 4e-81
Identities = 171/432 (39%), Positives = 273/432 (62%), Gaps = 10/432 (2%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
+ ++ LL+ ++AFFV +EFA+VK+R +RL++L+ + A LA + L+ YLSA Q
Sbjct: 5 IKFLIIALLIAISAFFVATEFAIVKMRPSRLDQLIAEKDKRAVLARHIYNHLNAYLSACQ 64
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEI 135
LGIT+SSL LGW+GE + L LF M+L ++ I I +S IAFL ITFLHVV+GE+
Sbjct: 65 LGITISSLGLGWLGESTVEAALHPLFSLMELPQSAITI--LSFTIAFLFITFLHVVVGEL 122
Query: 136 VPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGTHSE 194
VPK+LAI K+E L ARPLH+F+ V +P + + + A F + G+ P EH+ H+E
Sbjct: 123 VPKTLAIDKTETVALAVARPLHIFYKVMFPFIWILNGSAVFIARLFGLEPASEHEIAHTE 182
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
+ELKIIVGES + G I+ E + DF + AKE+M PR ++V +D ++ E DI
Sbjct: 183 DELKIIVGESYKSGEINQSEFRYVNKIFDFDERMAKEVMIPRTEIVTVDTGSTIGELSDI 242
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDF--NQIVRKMIIVPESASIS 312
+ +TRYP G KD++IG+++++++LS + F + V+ +I V E+ I
Sbjct: 243 MQNERYTRYPVIDGDKDHVIGVLNLKEILSAYVEHGSSPSFSIDPYVKPIIRVIETIPIK 302
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKLEEGVF 371
++L +M++E+ H A+++DEYGGT+GL+T+EDI+EEI+G+I DE+D + I K+++G +
Sbjct: 303 ELLFRMQRERSHIAILLDEYGGTSGLVTVEDIVEEIVGDIRDEFDADEIPEIRKIKDGHY 362
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME-GDTIVSHGYSFEVLSVD 430
++ L ++ V L E ++E E T+GG+ L + +E GD I G+ F V +
Sbjct: 363 IVDAKLLIDEVNNILGTEIEEE-EVDTIGGWF--LTQNYEVEVGDEIDYDGFIFRVKQGE 419
Query: 431 GARIKRLKAVKQ 442
I+ ++ +K+
Sbjct: 420 PHHIEYIEIIKK 431
>ref|NP_471665.1| (NC_003212) similar to unknown proteins [Listeria innocua]
emb|CAC97561.1| (AL596172) similar to unknown proteins [Listeria innocua]
Length = 434
Score = 301 bits (771), Expect = 1e-80
Identities = 170/432 (39%), Positives = 273/432 (62%), Gaps = 10/432 (2%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
+ ++ LL+ ++AFFV +EFA+VK+R +RL++L+ + A LA + L+ YLSA Q
Sbjct: 5 IKFLIIALLIAISAFFVATEFAIVKMRPSRLDQLIAEKDKRAVLARHIYNHLNAYLSACQ 64
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEI 135
LGIT+SSL LGW+GE + L LF ++L ++ I I +S IAFL ITFLHVV+GE+
Sbjct: 65 LGITISSLGLGWLGESTVEAALHPLFSLLELPQSAITI--LSFTIAFLFITFLHVVVGEL 122
Query: 136 VPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGTHSE 194
VPK+LAI K+E L ARPLH+F+ V +P + + + A F + G+ P EH+ H+E
Sbjct: 123 VPKTLAIDKTETVALAVARPLHIFYKVMFPFIWILNGSAVFIARLFGLEPASEHEIAHTE 182
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
+ELKIIVGES + G I+ E + DF + AKE+M PR ++V +D ++ E DI
Sbjct: 183 DELKIIVGESYKSGEINQSEFRYVNKIFDFDERMAKEVMIPRTEIVTVDTGSTIGELSDI 242
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDF--NQIVRKMIIVPESASIS 312
+ +TRYP G KD++IG+++++++LS + F + V+ +I V E+ I
Sbjct: 243 MQNERYTRYPVIDGDKDHVIGVLNLKEILSAYVEHGSNPSFSIDPYVKPIIRVIETIPIK 302
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKLEEGVF 371
++L +M++E+ H A+++DEYGGT+GL+T+EDI+EEI+G+I DE+D + I K+++G +
Sbjct: 303 ELLFRMQRERSHIAILLDEYGGTSGLVTVEDIVEEIVGDIRDEFDADEIPEIRKIKDGHY 362
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME-GDTIVSHGYSFEVLSVD 430
++ L ++ V L E ++E E T+GG+ L + +E GD I G+ F V +
Sbjct: 363 IVDAKLLIDEVNNILGTEIEEE-EVDTIGGWF--LTQNYEVEVGDEIDYDGFIFRVKQGE 419
Query: 431 GARIKRLKAVKQ 442
I+ ++ +K+
Sbjct: 420 PHHIEYIEIIKK 431
>ref|NP_657280.1| (NC_003995) DUF21, Domain of unknown function DUF21 [Bacillus
anthracis A2012] [Bacillus anthracis str. A2012]
Length = 442
Score = 301 bits (770), Expect = 1e-80
Identities = 174/441 (39%), Positives = 270/441 (60%), Gaps = 14/441 (3%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
I L++ +L+ FFV +EFA+VKVR +R+++LV G A A K++ LD YLSA
Sbjct: 3 IFNLVMVAILIAFTGFFVAAEFAIVKVRSSRIDQLVAEGKRGALAAKKVTTNLDEYLSAC 62
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGIT++++ LGW+GEP I KLL LFE +L NP ++ +AF+ +T+LHVV+GE
Sbjct: 63 QLGITVTAMGLGWLGEPTIEKLLHPLFEKWNL--NPSISSVLTFGLAFMLMTYLHVVVGE 120
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGTHS 193
+ PK++AI K+EK TL A PL +F+ V YP + + + A G+ P EH+ H+
Sbjct: 121 LAPKTMAIQKAEKVTLLFAAPLMMFYKVMYPFIWVLNGSARVITGLFGLKPASEHEVAHT 180
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EEEL++I+ +S G I+ E + + N +F + AKEIM PR ++V E+S EE++
Sbjct: 181 EEELRLILSDSYESGEINQAEYKYVNNIFEFDNRIAKEIMVPRTEIVGFYLEDSVEEHMK 240
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI---VRKMIIVPESAS 310
++ +TRYP KD+IIGMV+++D R T D + I +R +I V E+
Sbjct: 241 VIQNERYTRYPIFGEDKDDIIGMVNVKDFFIR-YMTEDQKDLSSIRSYMRPIIEVMETTP 299
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKLEEG 369
I +L++M+K++I A++ DEYGGTAG++T EDI+EEI+GEI DEYD + I + E
Sbjct: 300 IHDLLLQMQKKRIPMAVLYDEYGGTAGIVTFEDILEEIVGEIRDEYDEDEAPPIQHVNEQ 359
Query: 370 VFELEGMLDLESVEE--ALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVL 427
++G + + V++ LHIE D + T+GG++ + EG + + GY F+VL
Sbjct: 360 HIIVDGKVLISEVKDLFGLHIEED---DVDTIGGWIMMQNHEIE-EGQHVEAEGYEFKVL 415
Query: 428 SVDGARIKRLKAVKQDQGENE 448
D +IKR++ K ++ + E
Sbjct: 416 EKDAYQIKRVEIRKMEEEQEE 436
>ref|NP_388836.1| (NC_000964) similar to hemolysin [Bacillus subtilis]
sp|O07585|YHDP_BACSU Hypothetical protein yhdP
pir||F69826 hemolysin homolog yhdP - Bacillus subtilis
emb|CAA74500.1| (Y14082) hypothetical protein [Bacillus subtilis]
emb|CAB12794.1| (Z99109) similar to hemolysin [Bacillus subtilis]
Length = 444
Score = 300 bits (769), Expect = 2e-80
Identities = 174/437 (39%), Positives = 273/437 (61%), Gaps = 10/437 (2%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
I+ L++ +L+ L AFFV SEFA++++R +R+++L+ GN A K++ LD YLSA
Sbjct: 3 IVNLILVAVLIALTAFFVASEFAIIRIRGSRIDQLIAEGNKAAIAVKKVTTHLDEYLSAC 62
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGITL+S+ LG +GE I +LL LF M++ + H +S + A+ ITFLHVV+GE
Sbjct: 63 QLGITLTSIGLGVLGESTIERLLHPLFVQMNVPGS--LSHVISFIFAYAIITFLHVVVGE 120
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGTHS 193
+ PK++AI K+E ++ A+PL F+ + +P + L + A K G+ E++ HS
Sbjct: 121 LAPKTVAIQKAEAVSMLFAKPLIWFYRIAFPFIWLLNNSARLLTKAFGLETVSENELAHS 180
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EEEL+II+ ES + G I+ E + + +F D AKEIM PR ++V L + E +D
Sbjct: 181 EEELRIILSESYKSGEINQSEFKYVNKIFEFDDRLAKEIMIPRTEIVSLPHDIKISEMMD 240
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHD--FNQIVRKMIIVPESASI 311
I+ +TRYP +G KDNIIG+++I+++L+ I D +Q V +I V ESA I
Sbjct: 241 IIQIEKYTRYPVEEGDKDNIIGVINIKEVLTACISGEVSVDSTISQFVNPIIHVIESAPI 300
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKLEEGV 370
+L+KM+KE++H A++ DEYGGTAGL+T+EDIIEEI+GEI DE+D+ + I K+ EG
Sbjct: 301 QDLLVKMQKERVHMAILSDEYGGTAGLVTVEDIIEEIVGEIRDEFDIDEISEIRKIGEGH 360
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME-GDTIVSHGYSFEVLSV 429
+ L+G + ++ V + L I + E E T+GG+ L ++ +E D+I+ G F + +
Sbjct: 361 YILDGKVLIDQVNDLLGIHLENE-EVDTIGGWF--LTQKYDVEKDDSIIEEGCEFIINEI 417
Query: 430 DGARIKRLKAVKQDQGE 446
DG + ++ K + E
Sbjct: 418 DGHHVAYIEVKKLQEEE 434
>gb|AAK64446.1|AF377339_7 (AF377339) hemolysin TlyC [Myxococcus xanthus]
Length = 463
Score = 298 bits (764), Expect = 7e-80
Identities = 174/437 (39%), Positives = 267/437 (60%), Gaps = 16/437 (3%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
L L +A LLV N FFV +EFA+VK+R TRL+ LV G A A+KM ++LD YLSATQ
Sbjct: 6 LFLGLAILLVFANGFFVATEFAIVKIRATRLQALVDEGAPGAPTAMKMVEKLDAYLSATQ 65
Query: 76 LGITLSSLALGWVGEPAIAKLL-AALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
GITL+SL LG +GEPA A+LL L + + HS +VVI F ITFLH+VLGE
Sbjct: 66 FGITLASLGLGLLGEPAFARLLEPVLVQLVPEGAATTLAHSAAVVIGFSIITFLHIVLGE 125
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGI-NPKEHDGTHS 193
+ PKSLAI + E TL A P+ VF+V+FYP + L + +A + L+ G+ + E HS
Sbjct: 126 LAPKSLAIQRPEDTTLAVALPMRVFYVLFYPAIVLLNGLAAWVLRVFGLQSVGEAHEAHS 185
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI- 252
E+EL +I+ S + G I + E+++ A + + +A+++M PR + LD E E+ I
Sbjct: 186 EDELLVILHSSAQAGAITTARAELLERALEMAQKTARQVMVPRNQVKFLDVEEPLEKCIA 245
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRD---LLSRSIFTPKMHDFNQIVRKMIIVPESA 309
D GH T P C+G+ D + G+V+ +D LLSR ++ Q+ R ++ +PE A
Sbjct: 246 DARAAGH-TWLPVCRGNLDEVEGVVNAKDLFFLLSRG----ELRSLAQVQRPVLFIPEGA 300
Query: 310 SISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEG 369
++ Q+L + ++ + TALV+DE+GGT+GL+T+ D++ E++G+++ E + + + L G
Sbjct: 301 TLEQLLAEFRRRRRQTALVVDEHGGTSGLVTIADVVAEVVGDVA-ELGRRMDEVRALPGG 359
Query: 370 VFELEGMLDLESVEEALHIEF----DKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFE 425
FEL G L+ +EE L + F D+E E T+ GY+ + L R+P++GDT+ +
Sbjct: 360 RFELPGTAQLDDLEERLDVNFDLDEDEEGEVTTIAGYLMTRLGRVPVKGDTLRLDMWRIV 419
Query: 426 VLSVDGARIKRLKAVKQ 442
V +V+G R+ R+ Q
Sbjct: 420 VDAVEGPRVVRVTVEPQ 436
>ref|NP_371226.1| (NC_002758) hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
ref|NP_373912.1| (NC_002745) hypothetical protein, similar to hemolysin homologue
[Staphylococcus aureus subsp. aureus N315]
ref|NP_645481.1| (NC_003923) ORFID:MW0664~hypothetical protein, similar to hemolysin
homologue [Staphylococcus aureus subsp. aureus MW2]
dbj|BAB41890.1| (AP003131) ORFID:SA0657~hypothetical protein, similar to hemolysin
homologue [Staphylococcus aureus subsp. aureus N315]
dbj|BAB56864.1| (AP003360) hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
dbj|BAB94529.1| (AP004824) ORFID:MW0664~hypothetical protein, similar to hemolysin
homologue [Staphylococcus aureus subsp. aureus MW2]
Length = 449
Score = 295 bits (754), Expect = 1e-78
Identities = 161/396 (40%), Positives = 246/396 (61%), Gaps = 5/396 (1%)
Query: 12 SESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYL 71
+ +I+ L++ LL+ L FV SEFALVK+R TR+E+L GN AK+ KM LD YL
Sbjct: 3 TSTIISLIIFILLIALTTVFVGSEFALVKIRATRIEQLADEGNKPAKIVKKMIANLDYYL 62
Query: 72 SATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVV 131
SA QLGIT++SL LGW+GEP KLL +FE+++L ++S ++F+ +T+LHVV
Sbjct: 63 SACQLGITVTSLGLGWLGEPTFEKLLHPIFEAINLPT--ALTTTISFAVSFIIVTYLHVV 120
Query: 132 LGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGT 191
LGE+ PKS+AI +EK L ARPL F + P++ L + A ++ G+NP
Sbjct: 121 LGELAPKSIAIQHTEKLALVYARPLFYFGNIMKPLIWLMNGSARVIIRMFGVNPDAQTDA 180
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
SEEE+KII+ S G I+ E ++N F + AK+IM PR M+ L+E + +E
Sbjct: 181 MSEEEIKIIINNSYNGGEINQTELAYMQNIFSFDERHAKDIMVPRTQMITLNEPFNVDEL 240
Query: 252 IDIVLKGHFTRYPYC-KGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESAS 310
++ + + FTRYP G KD+I G +++++ L+ + K + ++ ++ E+
Sbjct: 241 LETIKEHQFTRYPITDDGDKDHIKGFINVKEFLT-EYASGKTIKIANYIHELPMISETTR 299
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKLEEG 369
IS LI+M++E +H +L+IDEYGGTAG+LTMEDI+EEI+GEI DE+D + I K++
Sbjct: 300 ISDALIRMQREHVHMSLIIDEYGGTAGILTMEDILEEIVGEIRDEFDDDEVNDIVKIDNK 359
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFS 405
F++ G + L+ + E IEFD + T+GG++ S
Sbjct: 360 TFQVNGRVLLDDLTEEFGIEFDDSEDIDTIGGWLQS 395
>ref|NP_390538.1| (NC_000964) similar to hemolysin-like [Bacillus subtilis]
sp|P54428|YRKA_BACSU Hypothetical protein yrkA
pir||G69975 hemolysin-like homolog yrkA - Bacillus subtilis
gb|AAB80911.1| (U93876) hypothetical protein YrkA [Bacillus subtilis]
emb|CAB14602.1| (Z99117) similar to hemolysin-like [Bacillus subtilis]
Length = 434
Score = 294 bits (753), Expect = 1e-78
Identities = 169/433 (39%), Positives = 261/433 (60%), Gaps = 10/433 (2%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
L++ LL++L AFFV +EFA+VK+R +++++L+ G A A K+ LD YLSA QLG
Sbjct: 6 LIIFTLLIVLTAFFVATEFAIVKIRSSKIDQLILEGKKGAISAKKVITHLDEYLSACQLG 65
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
IT+++L +GWVGE +L LF + E H + +VIAF+ TFLHVV+GE+ P
Sbjct: 66 ITVTALGIGWVGESTFEVILHPLFAHFHVSET--VSHVLILVIAFVMATFLHVVVGELAP 123
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGTHSEEE 196
K+LAI K+E TL A+P+ F+ + +P + + A F + G+ P EH+ HSEEE
Sbjct: 124 KTLAIQKAETITLLTAKPIIWFYRILFPFIWFLNGSARFIVGLFGLKPASEHELAHSEEE 183
Query: 197 LKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVL 256
L+I++ ES + G I+ E + + N +F + AKEIM PR+++V + E+SYE + I+
Sbjct: 184 LRILLSESYKSGEINQNELKYVNNIFEFDERIAKEIMIPRREIVAISSEDSYETIVKIIK 243
Query: 257 KGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPK--MHDF--NQIVRKMIIVPESASIS 312
+TRYP G KD+IIG ++ ++ LS I T + DF + +I V ES I
Sbjct: 244 TESYTRYPVLNGDKDSIIGFINAKEFLSAYIDTDQKIKEDFKLENHINPVIHVIESVPIH 303
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKLEEGVF 371
+L+KM+KE+ H A+++DEYGGT+GL+T EDI+EEI+GEI DE+D + I K+ + +
Sbjct: 304 DVLVKMQKERTHIAILVDEYGGTSGLVTAEDILEEIVGEIRDEFDKDEVPNIRKVNDNHY 363
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
L+ + +E V + L + E T+GG+ F + G I + GY F+V G
Sbjct: 364 ILDSKVLIEDVNDLLGTTLASD-EVDTIGGW-FMTQQIDAAVGSVIEADGYIFKVHETVG 421
Query: 432 ARIKRLKAVKQDQ 444
I L+ V++ +
Sbjct: 422 RHINYLEIVRKKE 434
>ref|NP_267991.1| (NC_002662) transport protein [Lactococcus lactis subsp. lactis]
gb|AAK05932.1|AE006413_8 (AE006413) transport protein [Lactococcus lactis subsp. lactis]
Length = 430
Score = 294 bits (752), Expect = 2e-78
Identities = 167/420 (39%), Positives = 257/420 (60%), Gaps = 7/420 (1%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
IL L + L++ L AFFV +EF+LVK+RK+RLE L K N AKLAL + LD+YLSA
Sbjct: 2 ILNLFIIVLMIFLTAFFVAAEFSLVKIRKSRLETLEKENNKRAKLALNIVNHLDSYLSAC 61
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGITL+SLA+GWVGE + +LA L + L + S+S+++AFL ITF+HVV+GE
Sbjct: 62 QLGITLTSLAIGWVGESTMHSILAPLLSYVPLPS--ALLDSLSIILAFLLITFVHVVIGE 119
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGIN-PKEHDGTHS 193
++PKSL+I K+E L A PLH F+ + YP V L + A K ++ E D HS
Sbjct: 120 LIPKSLSITKTEGVVLTVAAPLHYFYKLTYPFVWLLNASASSIGKLFNLSLATEGDEIHS 179
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EEEL +I +S +G I+ E E + N +F D AK+IM R DM + + S EE +
Sbjct: 180 EEELILIANQSFIKGEINEKEYEYLNNVFEFDDLIAKDIMVSRLDMETIPVDVSIEEALK 239
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
+K TR+P +KD+I+G V +++L+ + P + +I+++ II ++ +
Sbjct: 240 FAIKKGHTRFPIIAKTKDDILGYVTLQNLIKEYLTAPG-QEIKKIMQEPIIFIDTIPVKL 298
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFEL 373
+L +M+KE H A+++DEYGGT+GL+T+EDI+EE++G+I DE D ++E + KL +++
Sbjct: 299 LLSEMQKEHKHFAILLDEYGGTSGLVTIEDILEELVGDIQDEEDHEKELVIKLSPTTYQV 358
Query: 374 EGMLDLESVEEALHIEFDKECEQVTLGGYV--FSLLERMPME-GDTIVSHGYSFEVLSVD 430
+G L L EE +I+ + T+ G++ +SL + P+E G T ++ +D
Sbjct: 359 DGKLLLSEFEELFNIDLAQNNLSKTISGFITNYSLEQNEPLEVGQTFEFDNLKITIIEMD 418
>ref|NP_390355.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|P54505|YQHB_BACSU Hypothetical protein yqhB
pir||E69958 conserved hypothetical protein yqhB - Bacillus subtilis
dbj|BAA12531.1| (D84432) YqhB [Bacillus subtilis]
emb|CAB14406.1| (Z99116) similar to hypothetical proteins [Bacillus subtilis]
Length = 442
Score = 290 bits (741), Expect = 3e-77
Identities = 173/438 (39%), Positives = 267/438 (60%), Gaps = 13/438 (2%)
Query: 13 ESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLS 72
E I +L VA +L+LL FFV EF++VKVR++++++LV G AK A + LD YLS
Sbjct: 11 EFINLLAVA-ILILLTGFFVAVEFSIVKVRRSKIDQLVAKGKKGAKAAKHVITHLDEYLS 69
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
A QLGIT+++L LGW+GEP + LL LF L E+ H +S+VIAFL +T+L+VV+
Sbjct: 70 ACQLGITVAALGLGWLGEPTVQTLLRPLFHKAGLNES--LTHLLSLVIAFLVVTYLNVVI 127
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGT 191
GE+ PKS AI K+E TL A+PL F+ + +P + L + A G+ P EH+
Sbjct: 128 GELAPKSFAIQKAESITLLFAKPLIWFYKIMFPFIWLLNHSARLITGVFGLKPASEHELA 187
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLD-EENSYEE 250
++EEEL++++ ES + G I E + + N F AKEIM PR +MV L +E+S
Sbjct: 188 YTEEELRVLLAESYKSGEIRKSELKYMNNIFTFDKRMAKEIMVPRNEMVSLSLDEDSISN 247
Query: 251 NIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSI---FTPKMHDFNQIVRKMIIVPE 307
+ V + +TRYP + KDN+IG+++++++L + F+ K H V+ +I V E
Sbjct: 248 LQETVKQTKYTRYPVVREDKDNVIGVINMKEVLFSMLTKDFSIKKHQIEPFVQPVIHVIE 307
Query: 308 SASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKL 366
+ I ++L+KM+KE+ H A++IDEYGGT+GL+T+EDIIEEI+GEI DE+D + I +L
Sbjct: 308 TIPIYKLLLKMQKERTHMAILIDEYGGTSGLVTVEDIIEEIVGEIRDEFDADEVPHIREL 367
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSH-GYSFE 425
+ + L L + V L + E E TLGG+ L + + E ++ + + GYSF+
Sbjct: 368 GKDHYLLNAKLLISDVNSLLGTDL-SEAEVDTLGGWF--LTQNIDAEPESAIEYDGYSFK 424
Query: 426 VLSVDGARIKRLKAVKQD 443
V ++ I ++ K +
Sbjct: 425 VKDINSHHILFIEVKKAE 442
>ref|NP_295899.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||G75304 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF11725.1|AE002051_1 (AE002051) conserved hypothetical protein [Deinococcus radiodurans]
Length = 446
Score = 279 bits (713), Expect = 6e-74
Identities = 162/427 (37%), Positives = 253/427 (58%), Gaps = 6/427 (1%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
I L F LVL+N FFV +EF+LV VR+TR+++L + GN+ A+ A Q LD Y++AT
Sbjct: 4 IFGLFAMFFLVLMNGFFVAAEFSLVSVRRTRIDQLAEEGNATAQAAQGALQNLDLYIAAT 63
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGIT++SLA+G+V EPAI LL L DL E+ +++ +AF T LH+V GE
Sbjct: 64 QLGITMASLAIGFVAEPAIEHLLEPLLHQTDLSESS--RKAIAFGVAFAISTTLHIVFGE 121
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP-KEHDGTHS 193
+ PKS A+ + E+ L RPL F VF +R + + + ++ G+ H +S
Sbjct: 122 LAPKSWALQRPEQVVLMITRPLLAFAGVFKWAIRGLNALGNGVVRLFGLKAVTGHHTAYS 181
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EEE+++IV S +EG+++ E E++ N D SDT+ +E+M PR DMV +D ++
Sbjct: 182 EEEIRMIVSASSQEGVLEDSEKELVYNVFDLSDTTVREVMRPRVDMVTVDSALPLRRLLE 241
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
+ + ++R P + + DNI+G+ HI D+L R + I+R + VPE+ I
Sbjct: 242 LNDEHGYSRVPVYQDTGDNIVGIAHIGDVL-RHLGELDHLTIADIMRPVFFVPEAMKIKD 300
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDE-YDLKQEGINKLEEGVFE 372
+L KM+ ++ H ++V+DE+GGT GL+T+ED IEEI+GEI DE + +++ I + EG++
Sbjct: 301 LLAKMRAKKSHMSIVVDEFGGTMGLVTLEDAIEEIVGEIYDETVEEEEQPIIVIAEGIYL 360
Query: 373 LEGMLDLESVEEALHIEF-DKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
++ L + VEE L D E E TL G++ S +P G + V G+SF V D
Sbjct: 361 MDASLTVHEVEERLGSNLEDGEAEYDTLAGFMTSHFGDIPEVGQSFVHGGWSFTVEEADQ 420
Query: 432 ARIKRLK 438
R+ R++
Sbjct: 421 RRVTRVR 427
>ref|NP_395802.1| (NC_002608) Vng6302c [Halobacterium sp. NRC-1]
gb|AAG20937.1| (AE005160) Vng6302c [Halobacterium sp. NRC-1]
Length = 459
Score = 266 bits (680), Expect = 4e-70
Identities = 152/425 (35%), Positives = 247/425 (57%), Gaps = 9/425 (2%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+ +A LLV+LN FFV +EFA V++R +E LV+ G A + + LD YL+ +QLG
Sbjct: 33 IALALLLVVLNGFFVAAEFAFVRLRSASVETLVQDGRRGATAVKEATDNLDDYLAVSQLG 92
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
IT++SL LGWVGEPA+A L+ L E + P+ H+++V + F +T LHVV GE+ P
Sbjct: 93 ITIASLGLGWVGEPAVAVLVDPLLE--PVLPAPV-RHTVTVALGFGIVTLLHVVYGELAP 149
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEEE 196
K++AI ++E+ L A + +F+ VF P LF+ IA ++ +G++P+ E TH+E E
Sbjct: 150 KTIAIQRAERVALVVAPVMKLFYYVFLPGTILFNGIATRSVQLIGVSPETEGHDTHTEPE 209
Query: 197 LKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVL 256
+ ++ E+ G I E +I++ DT+ +EIM PR D+ + + E +
Sbjct: 210 ILSVLSEASAAGRISPAEVSMIEHVFSLDDTTVREIMRPRPDVTSVSADTPLPELRTMAA 269
Query: 257 KGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDF--NQIVRKMIIVPESASISQI 314
G +TRYP +G D++IG V ++D+L S + D ++ R +++VPE+ + ++
Sbjct: 270 SGEYTRYPVTEGPDDDVIGFVDVKDILRASDAIDESGDVTARELSRPVVVVPETLRVDEL 329
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL--KQEGINKLEEGVFE 372
L + + E A+VIDE+G GL T+ED +E I+G+I D++DL + I ++G +E
Sbjct: 330 LAEFQAEHRQMAVVIDEWGAFEGLATIEDALEVIVGDIRDQFDLATHAQSIEPRDDGGYE 389
Query: 373 LEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGA 432
+ G + + + + L +F+ E + T+ G V S L P GD V ++F V VDGA
Sbjct: 390 VPGAVSITELNDHLGTDFENEAVE-TVAGLVVSRLGHAPTVGDRAVIDTHTFRVTGVDGA 448
Query: 433 RIKRL 437
RI L
Sbjct: 449 RITSL 453
>ref|NP_254049.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||E82975 conserved hypothetical protein PA5362 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG08747.1|AE004948_3 (AE004948) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 446
Score = 243 bits (621), Expect = 3e-63
Identities = 149/432 (34%), Positives = 239/432 (54%), Gaps = 8/432 (1%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
+++ A LVLLN FFV +EFA+VK+R TR+E + K + K+ +LD YLSA QL
Sbjct: 18 LILFALFLVLLNGFFVAAEFAMVKLRATRVETIAKQHGWRGTILRKVHNQLDAYLSACQL 77
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
GITL+SL LGWVGEPA A+LL L + + + + I +S AF I++LH+V+GE+
Sbjct: 78 GITLASLGLGWVGEPAFAELLEPLLAMIGVHSDEL-IRGISFFTAFFIISYLHIVVGELA 136
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP--KEHDGTHSE 194
PKS AI K E +L+ A PL++F+ + YP + L + A+ LK G H+ +S
Sbjct: 137 PKSWAIRKPELLSLWTAVPLYLFYWLMYPAIWLLNASANAILKIAGQGEPGPHHEHHYSR 196
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
+ELK+I+ S + D ++ +A + + + R+D+V L+ + + + +
Sbjct: 197 DELKLILHSSRAQDPSDQ-GMRVLASAVELGELEVVDWANSREDLVYLEHDAPLADILAV 255
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDL---LSRSIFTPKMHDFNQIVRKMIIVPESASI 311
+ + ++RYP K IG++HI+DL LS P+ D +++VR + IV + +
Sbjct: 256 IRRHKYSRYPVWDSHKGEFIGLLHIKDLLLALSALDSLPETFDLDELVRPLEIVTKHTPL 315
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVF 371
S++L + +K H A+V + G LTMED++E ++G+I DE+ + GI + G
Sbjct: 316 SRLLEQFRKGGAHFAVVEEADHKVVGFLTMEDVLEVLVGDIQDEHRKTERGILAYQPGKL 375
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
+ G L +E L I+ D E TL G V+ L+R+P E + + + G V + G
Sbjct: 376 LVRGDTPLFKLERLLGIDLD-HVEADTLAGLVYDTLKRVPEEEEVLDTEGLRIIVKKMRG 434
Query: 432 ARIKRLKAVKQD 443
+I K VK D
Sbjct: 435 PKIVLAKVVKLD 446
>ref|NP_441829.1| (NC_000911) hemolysin [Synechocystis sp. PCC 6803]
sp|P74409|Y260_SYNY3 Hypothetical protein sll0260
pir||S76248 hemolysin, 49K - Synechocystis sp. (strain PCC 6803)
dbj|BAA18507.1| (D90914) hemolysin [Synechocystis sp. PCC 6803]
Length = 448
Score = 243 bits (619), Expect = 4e-63
Identities = 146/425 (34%), Positives = 239/425 (55%), Gaps = 7/425 (1%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
L L F+LV+LN F SE A+V RK RLE+L K GN AKLALK++ + +LSA Q
Sbjct: 8 LELFFIFVLVVLNGIFSGSEIAIVSARKVRLEQLAKRGNRKAKLALKLATAPNNFLSAVQ 67
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEI 135
+GITL + G VG +A LA + + L S+S+++ F IT+L +V+GE+
Sbjct: 68 IGITLIGILTGAVGGATVALRLAEFLDDIPLLAPYAGPLSISLLVGF--ITYLSLVVGEL 125
Query: 136 VPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEE 195
VPK +A++ E A +H+ + P+V L V L+ GI KE +EE
Sbjct: 126 VPKRIALSHPEHIACGVAPAMHLVAQLTAPLVYLLGVSTDAVLRLFGITSKEASPI-TEE 184
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIV 255
E+++++ + + G+ID E E+++ D K +MTPR + LD E+ +EEN +
Sbjct: 185 EIRVMIEQGAQAGMIDEAEQEMVERVFRLGDRPVKTLMTPRTAIAWLDVESDWEENQQEI 244
Query: 256 LKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQIL 315
L ++R+P + S D +G V ++D+L+ S ++ + + +IV+ + V E+ +L
Sbjct: 245 LDTPYSRFPVGRDSLDECLGFVRVKDILN-SQWSGQKINLEEIVQPPLFVAENTRSLHVL 303
Query: 316 IKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEG 375
+ H AL+ DEYGG GL+T+ D+IE I+G I ++ ++++ I + E+G + L+G
Sbjct: 304 EMFRASGTHLALITDEYGGIEGLVTLNDLIEAIVGSIPNDDEIQEPQIIQREDGSYLLDG 363
Query: 376 MLDLESVEEALHIEF---DKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGA 432
+L ++ +E IE ++E TLGG+V L ++P GD VS EV+ +DG
Sbjct: 364 LLPIDEFKEIFDIETLSNEEEGHYHTLGGFVIESLGKIPQSGDYFVSDTLRVEVVDMDGI 423
Query: 433 RIKRL 437
RI ++
Sbjct: 424 RIDKV 428
>ref|NP_641874.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM36410.1| (AE011786) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 440
Score = 243 bits (619), Expect = 4e-63
Identities = 143/424 (33%), Positives = 235/424 (54%), Gaps = 4/424 (0%)
Query: 14 SILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSA 73
++L+L+VA LLVLLN FFV +EFALVK+R T+ L + +L L + LD YLSA
Sbjct: 4 NVLLLLVALLLVLLNGFFVAAEFALVKLRHTQAVGLAQTNGWRGRLLLGVHAHLDAYLSA 63
Query: 74 TQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLG 133
QLGITL+SL LGWVGEPA A LL LF+++ L +P ++ IAF I+FLH+VLG
Sbjct: 64 CQLGITLASLGLGWVGEPAFAHLLQPLFDTLGL--SPEAAQFTALAIAFSLISFLHIVLG 121
Query: 134 EIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDG-TH 192
E+ PK++AI + E+ +L+ A PL+VF+ + YP + + + A+ FL+ +G EH +
Sbjct: 122 ELAPKTMAIRRPERMSLWTAAPLYVFYWLMYPAIWVLNTSANRFLRLLGWGEVEHHSHRY 181
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
S EEL +IVG ++ +A + D A ++M PR+ M L E + E +
Sbjct: 182 SREELMLIVGRQDPNAAAPDQGLALMSHALELPDLVAGDLMRPREHMRSLREGMTLETVL 241
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASIS 312
+ ++RYP+ + ++G++H +DLL + D ++R ++ I
Sbjct: 242 AEFSESRYSRYPWFDADGEQVLGILHTKDLLVAMARGQNLDDLRPLLRPPTVLTLETPIP 301
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEY-DLKQEGINKLEEGVF 371
L + + H AL ++E G G T+ED++E ++G+I DE+ + ++ + ++G
Sbjct: 302 NALEQFRTGTTHLALCVEEEGRILGFFTLEDLLEVVVGDIEDEHRHVVRDAPIRGQDGSL 361
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
+ G + +E L + ++GG + L+R+P EG+T+ G+ V + G
Sbjct: 362 LVAGSTSIFRLERLLGQDLSAPDHVNSVGGLILCQLQRLPEEGETLELDGHLLTVRRMAG 421
Query: 432 ARIK 435
RI+
Sbjct: 422 HRIQ 425
>ref|NP_489136.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB76795.1| (AP003598) ORF_ID:all5096~hypothetical protein [Nostoc sp. PCC
7120]
Length = 436
Score = 241 bits (616), Expect = 1e-62
Identities = 138/433 (31%), Positives = 245/433 (55%), Gaps = 14/433 (3%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
L L+ LL+++NAFFV +EF++V VR++R+ +LV+ G+ A + + +D LS TQ
Sbjct: 3 LRLLSVLLLIVINAFFVTAEFSIVTVRRSRIHQLVQSGDIQAIAVESLQRNIDRVLSTTQ 62
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDL--RENPIFIHSMSVVIAFLSITFLHVVLG 133
LGITLSSLA+GW+GE +IA ++ +S L N HS+S+ IAF I +L +VLG
Sbjct: 63 LGITLSSLAVGWIGESSIAVVMRWWIKSWPLPANVNHFVAHSLSIPIAFFLIAYLQIVLG 122
Query: 134 EIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTH- 192
E+ PKS+A+ SE+ F + F P + + + + L+ G+ E+ G
Sbjct: 123 ELCPKSVAMLYSEQLARFLGPAIKAIVRFFRPFIWILNQSTSYLLRLFGV---EYTGQSW 179
Query: 193 ----SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSY 248
+ EEL++I+ ++ E E++ N +F D +A+++M PR ++ L ++ ++
Sbjct: 180 RPPVTPEELQLIISTERESTGLEMAERELLNNIFEFGDVTAQDVMIPRNGIIALSKDANF 239
Query: 249 EENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI---VRKMIIV 305
+ + + +RYP S D+I G+V+ RDL + + K+ QI +R + V
Sbjct: 240 QNLLQQMTATGHSRYPVIGESLDDIRGIVYFRDL-ANPLAIGKLSLETQIQPWMRPVRFV 298
Query: 306 PESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINK 365
PE +S++L M++E+ +V+DE+GGT GL+T++D+I EI+G + + I
Sbjct: 299 PEHTPLSELLPMMQQEKPAMVIVVDEFGGTVGLVTIQDVIAEIIGNAGETSSSEDLLIQM 358
Query: 366 LEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFE 425
L++ F ++ ++LE + E LH+ + TL G++ L++MP++G+ F
Sbjct: 359 LDQETFLVQAQVNLEDLNEVLHLNLPLTRQYQTLAGFLLYQLQKMPIKGEIFCYDNIEFT 418
Query: 426 VLSVDGARIKRLK 438
++SVDG R+ +++
Sbjct: 419 IVSVDGPRLHQIQ 431
>ref|NP_385771.1| (NC_003047) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium
meliloti]
emb|CAC46244.1| (AL591788) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium
meliloti]
Length = 430
Score = 239 bits (611), Expect = 4e-62
Identities = 139/422 (32%), Positives = 236/422 (54%), Gaps = 7/422 (1%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
L+V FLL+L+NAFF LSE A+V K L ++VK GN A+ ALK+++ +LS Q+G
Sbjct: 4 LLVIFLLLLINAFFALSEMAIVSASKPLLRQMVKQGNRRAEAALKLAEDPGKFLSTVQVG 63
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
ITL + G G IA +A D+ + +++V + ITFL VV+GE++P
Sbjct: 64 ITLVGILAGAYGGATIAAKIAPFLN--DIGWISPYGDTIAVALVVTLITFLSVVIGELIP 121
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
K LA+ E +F A P+ + + PVV +F+ A ++ MG+ P++ D +EEE+
Sbjct: 122 KQLALRNPEGLAMFVAGPMALLSRIVAPVVYIFETAASIAMRLMGMRPEDSDRV-TEEEV 180
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLK 257
+ I+ E + G I+ E E+++ D + K IMT R ++ +D +S E + +
Sbjct: 181 QAIMAEGVESGAIEKSEHEMLRRIIRLGDRNVKSIMTHRTEVSFIDVHDSLETIGQKIRQ 240
Query: 258 GHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIK 317
+RYP G ++IG V +++L+ + P + VR+++ +PE+AS + L
Sbjct: 241 FGHSRYPVIDGPSGDVIGAVLAKEILNVAPAAP--FNIRDYVREILTLPETASCLKALEA 298
Query: 318 MKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG-INKLEEGVFELEGM 376
K I+ A+++DEYG T G++T DI+E I+G I YD + I + ++G + ++G
Sbjct: 299 FKSSSINMAMIVDEYGSTEGIITTADILEAIVGVIPSNYDNSEHALIRQRDDGSYLVDGR 358
Query: 377 LDLESVEEALHIE-FDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIK 435
++ + + I+ D + + T+ G++ L + P EGDT +HGY FEV+ +DG RI
Sbjct: 359 TPIDEIHLQIGIDGIDADGDFETIAGFLVQQLRKTPEEGDTAEAHGYRFEVIDMDGRRID 418
Query: 436 RL 437
++
Sbjct: 419 KI 420
>ref|NP_347100.1| (NC_003030) CBS-domain containing protein, YHDP B.subtilis ortholog
[Clostridium acetobutylicum]
gb|AAK78440.1|AE007561_1 (AE007561) CBS-domain containing protein, YHDP B.subtilis ortholog
[Clostridium acetobutylicum]
Length = 443
Score = 238 bits (606), Expect = 1e-61
Identities = 131/434 (30%), Positives = 249/434 (57%), Gaps = 10/434 (2%)
Query: 10 DPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDT 69
DP IL ++ +L L+NAFF +E ++V + KTR++ L + GN NA++ K+ +
Sbjct: 6 DPDNMILQFVLIAVLTLVNAFFSAAEMSIVSLNKTRMKILSEEGNRNAQILEKLIKEPTK 65
Query: 70 YLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLH 129
+LS Q+GITL+S ++ + + +++ + +++++ + +++
Sbjct: 66 FLSTVQVGITLASFFSSAFAATGLSDMFGGYLKKINIP----YSSQVALIVVTIVLSYFT 121
Query: 130 VVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHD 189
+V GE+ PK +A+ KSEK + AARP+ + P V+L + L+ G+N + +
Sbjct: 122 LVFGELFPKRIALQKSEKIAMLAARPILYVSKITVPFVKLLSASTNVLLRITGMNMNKLE 181
Query: 190 GTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE 249
S EE+K IV G+I+ E E+I + +F D A+E+MTPR ++ ++ +
Sbjct: 182 EKVSIEEIKSIVEAGQEYGVINESEKEMIDSIFEFDDRIAEEVMTPRTEVYLINIDTPLN 241
Query: 250 ENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLL--SRSIFTPKMHDFNQIVRKMIIVPE 307
+ +D +L+ ++R P +G DNIIG+++I+D + +R + + + I+ VPE
Sbjct: 242 KYVDELLEIKYSRVPVFEGDSDNIIGILYIKDFIVEARKVGFENV-NIKNIIHSPYFVPE 300
Query: 308 SASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLE 367
+I+++ +++ + H A++IDEYGG +G++T+ED+IEE+MG ISDEYD I K++
Sbjct: 301 RKNINELFKELQAAKKHMAVLIDEYGGFSGIVTIEDLIEEVMGNISDEYDEDDNYIKKID 360
Query: 368 EGVFELEGMLDLESVEEALHIEFDKECEQV-TLGGYVFSLLERMPMEGD--TIVSHGYSF 424
E F ++G++ + + E L ++ D+E + TLGG + L+ +P + + +I G +F
Sbjct: 361 ESTFIIKGIIPIRELNEQLDLDLDEETDDYDTLGGLLIKLIGHIPEDNEQQSIKYKGITF 420
Query: 425 EVLSVDGARIKRLK 438
E+ V RI++++
Sbjct: 421 EIKEVKEKRIEKVE 434
>ref|NP_561353.1| (NC_003366) probable hemolysin [Clostridium perfringens]
dbj|BAB80143.1| (AP003186) probable hemolysin [Clostridium perfringens]
Length = 445
Score = 237 bits (604), Expect = 2e-61
Identities = 127/433 (29%), Positives = 249/433 (57%), Gaps = 8/433 (1%)
Query: 9 LDPSESILMLMVAFL-LVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRL 67
+DPS SIL ++ L L+L+NAFF +E A+V V K++++ L + GN A L K+ +
Sbjct: 1 MDPSPSILPKIILILVLILINAFFAAAEMAMVSVNKSKIKMLAEKGNKKALLLKKVLKSP 60
Query: 68 DTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITF 127
+LS Q+GIT + +I++ LA +++ + + +SV++ + +++
Sbjct: 61 GNFLSTIQIGITFAGFFASASAATSISETLAQFMYKLNIP----YGNEISVILITVLLSY 116
Query: 128 LHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKE 187
+ +V GE++PK +A+ K E+ L A RP++V + P V++ + F+K +G+N E
Sbjct: 117 ITLVFGELLPKRIALQKPEEIALMAIRPINVISKISTPFVKILSASTNLFIKILGLNKSE 176
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
T S++E+K ++ G+ID E +++ N +F KE+MTPR ++ +
Sbjct: 177 DKETVSKDEIKSMISIGQESGVIDKTEKDMLDNIFEFDHKVVKEVMTPRGEVFAIKSTTP 236
Query: 248 YEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMH-DFNQIVRKMIIVP 306
E ++ F+R P ++DNI+G+++++D + + +Q++R V
Sbjct: 237 NETIAKKLISEQFSRVPVYNETRDNIVGILYLKDFFEAVVKVGVDNIKLDQLIRPAYFVL 296
Query: 307 ESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL 366
E+ +I + +++ + H A++IDEYGG +G++T+ED+IEE+MG+I DEYD + I+K+
Sbjct: 297 ENKAIDDLFKELQDSKQHMAVIIDEYGGFSGIVTIEDLIEEVMGDILDEYDDSENYIDKI 356
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSH-GYSFE 425
+ + ++G+L L+ + + L++ + + + T+GG+V +L+ +P + +V + SF+
Sbjct: 357 DNNTYVVDGLLTLDKLNDYLNLNLESQNIE-TIGGFVVNLIGNIPQSENQMVEYDNLSFQ 415
Query: 426 VLSVDGARIKRLK 438
V + RI++LK
Sbjct: 416 VCKTNKKRIEKLK 428
>ref|NP_489256.1| (NC_003272) probable hemolysin [Nostoc sp. PCC 7120]
dbj|BAB76915.1| (AP003599) ORF_ID:alr5216~probable hemolysin [Nostoc sp. PCC 7120]
Length = 442
Score = 231 bits (590), Expect = 1e-59
Identities = 137/426 (32%), Positives = 225/426 (52%), Gaps = 7/426 (1%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+++ +L++ N F +SE A+V RK RL++L G+ AK ALK+++ + +LS Q+G
Sbjct: 8 ILIILVLIVANGIFSMSEMAIVSARKVRLQQLANQGDPKAKAALKLAESPNNFLSTVQIG 67
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
I+L + G G IA LA + + +S I L IT+L +++GE+VP
Sbjct: 68 ISLIGILTGAFGGATIASRLAVYVRLVPFLTP--YSEPVSFGIVVLIITYLSLIIGELVP 125
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
K LA+ E+ A P+ + P V L L+ MGI P +EEE+
Sbjct: 126 KRLALNSPERIAAIVAIPMRALATLASPAVHLLSASTDMVLRIMGITPSLEPQV-TEEEI 184
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLK 257
KI++ + G + E ++++ D MTPR D+V LD E++ EEN + +
Sbjct: 185 KILIEQGTEAGTFEEAEQDMVERVFRLGDRPVSSFMTPRPDIVWLDLEDTTEENRQKMSE 244
Query: 258 GHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIK 317
++RYP C+G DN++G++ + DLL+RS+ + D +R+ + VPES ++L
Sbjct: 245 NGYSRYPVCQGGLDNVLGIIPVTDLLARSLRGDSL-DLTVGLRQPVFVPESTRGLKVLEL 303
Query: 318 MKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGML 377
K+ H ALV+DEYG GL+T+ DI+ EI+G++ + + E+G + L+GML
Sbjct: 304 FKQTITHMALVVDEYGVIQGLVTLNDIMSEIVGDVPSADGEEDPQAVQREDGSWLLDGML 363
Query: 378 DLESVEEALHIE---FDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARI 434
+E E +E F++ TLGG+V + L R+P D G EV+ +DG R+
Sbjct: 364 AVEEFFELFGLEEWDFEERGSYQTLGGFVITHLGRIPAAADHFEWQGMRIEVMDMDGNRV 423
Query: 435 KRLKAV 440
++ V
Sbjct: 424 DKVLVV 429
>ref|NP_636865.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM40789.1| (AE012250) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 454
Score = 231 bits (588), Expect = 2e-59
Identities = 138/421 (32%), Positives = 230/421 (53%), Gaps = 4/421 (0%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
+L+VA LLVLLN FFV +EFAL K+R T+ L + +L L + LD YLSA QL
Sbjct: 21 LLLVALLLVLLNGFFVAAEFALFKLRHTQAVGLAEHHGWRGRLLLGVHAHLDAYLSACQL 80
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
GITL+SL LGWVGEPA A LL +F+++ L +P ++ IAF I+FLH+VLGE+
Sbjct: 81 GITLASLGLGWVGEPAFAHLLQPVFDTLGL--SPEAAQFTALAIAFSLISFLHIVLGELA 138
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDG-THSEE 195
PKS+AI + E+ +L+ A PL+ F+ V YP + + + A+ L+ +G EH +S E
Sbjct: 139 PKSMAIRRPERMSLWTAAPLYAFYWVMYPAIWVLNNSANRLLRVLGWGEVEHQSHRYSRE 198
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIV 255
ELK+IVG ++ + + D A ++M PR+ + L E + + +
Sbjct: 199 ELKLIVGRQDPNAAAPDHGMALMSHVLELPDLVAGDLMRPREHLRSLREGMTLQTVLAEF 258
Query: 256 LKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQIL 315
++RYP+ + ++G++H +D+L + ++R ++ + I + L
Sbjct: 259 STSRYSRYPWFDADGEQVLGILHTKDILVAMARGQTLDALRTLLRPATVLALESPIPRAL 318
Query: 316 IKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEY-DLKQEGINKLEEGVFELE 374
+ + H AL +DE+G G T+ED++E ++GEI DE+ + ++ + +G +
Sbjct: 319 EQFRSGATHLALCVDEHGRILGFFTLEDLLEVVVGEIEDEHRHVVRDAPVRGPDGSLLVA 378
Query: 375 GMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARI 434
G + +E L + + ++GG + L+R+P EG+T+ G+ V + G RI
Sbjct: 379 GSTSIFRLERLLGRDLSAPDQVNSVGGLIVHQLQRLPEEGETLELDGHLLTVRRMVGHRI 438
Query: 435 K 435
+
Sbjct: 439 Q 439
>ref|NP_625718.1| (NC_003888) putative secreted protein. [Streptomyces coelicolor
A3(2)]
emb|CAB61655.1| (AL133213) putative secreted protein. [Streptomyces coelicolor
A3(2)]
Length = 443
Score = 223 bits (569), Expect = 3e-57
Identities = 135/434 (31%), Positives = 236/434 (54%), Gaps = 13/434 (2%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
+L+L AFLL+L N FFV +EF LV V + E+ G+ A ++ + L LS T
Sbjct: 5 LLLLAAAFLLILANGFFVAAEFGLVTVERPDAEQAAAAGDRRAHRVVESLKELSFQLSGT 64
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGIT++SL +G + EPA+A+LL F ++ + + + +SVV+ L + + +V+GE
Sbjct: 65 QLGITITSLVVGMLAEPALARLLDGPFTAVGVPDGA--VSGVSVVVGMLLASAVQMVIGE 122
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH-DGTHS 193
+VPK+ A++K + F A P H F +F+PV+ + +A+ ++ +GI P E +
Sbjct: 123 LVPKNWAVSKPLQVARFVAGPQHAFARLFHPVIAALNTVANRLVRTLGIEPAEELASART 182
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EL + S R G ++ ++ + +A+ +MTPR + L + E+ ++
Sbjct: 183 PGELVSLARHSARAGALEQDTADLFVRTLSLGELTAQHVMTPRVKVSALHSSATAEDVVN 242
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
+ +R+P + D I+GMVH++D L+ + +I R ++VPE+ +
Sbjct: 243 LTRATGLSRFPVYREKIDEIVGMVHLKDALAVPVHDRLRTPAGRIARPALLVPETLPVRP 302
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEY---DLKQEGINKLEEG- 369
+L +++ EQ A+V+DEYGGTAG++T+EDI+EEI+GE+ DE+ D + E+G
Sbjct: 303 LLTRLRSEQ-PIAVVVDEYGGTAGVVTLEDIVEEIVGEVRDEHDGLDAPELAPAPPEDGR 361
Query: 370 -VFELEGMLDLESVEEALHIEFD-KECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVL 427
++++G ++++ + D E T+ G V LL R+P GD G+ V
Sbjct: 362 PAWDVDGSCRVDALR---RVGLDAPEGPYETVAGLVADLLGRIPAVGDRAELPGWRLSVR 418
Query: 428 SVDGARIKRLKAVK 441
V R +R++ V+
Sbjct: 419 QVGHYRAERIRLVR 432
>ref|NP_471828.1| (NC_003212) similar to conserved hypothetical proteins [Listeria
innocua]
emb|CAC97725.1| (AL596172) similar to conserved hypothetical proteins [Listeria
innocua]
Length = 436
Score = 220 bits (561), Expect = 2e-56
Identities = 140/422 (33%), Positives = 238/422 (56%), Gaps = 17/422 (4%)
Query: 24 LVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSL 83
L+ AFFV SEFA+V +RK + +L+ N AK K++ ++ YL+A QLG TL++L
Sbjct: 12 LIAATAFFVASEFAIVAIRKPTVLQLLASDNPRAKYVKKVTSNMNDYLAACQLGNTLAAL 71
Query: 84 ALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIA 143
A+GWVGE + L LF + L E+ +S+ ++F+ ITFL+VVLGE+ PK+ I
Sbjct: 72 AMGWVGEATMRGWLEPLFLMLPLPES--LEKPISIFVSFILITFLNVVLGELAPKTFTIQ 129
Query: 144 KSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIVGE 203
+EK LF ARPL ++ + +P+ L + A+ + G+ + + ELKII +
Sbjct: 130 STEKVALFIARPLVYWYRLTFPLNWLLNNSANLITRMFGVKRTDDADQMTPTELKIIFED 189
Query: 204 SLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRY 263
S R+G+++ E +KN D AKE+M PR M+ +D+ + + + + + + +
Sbjct: 190 SYRQGLLNPQEFRYMKNIFKLGDVPAKEVMIPRMSMIAIDQTATVRDLLKLTSEHTYHIF 249
Query: 264 PYCKG-SKDNIIGMVHIRDLLS-----RSIFTPKMHDFNQIVRKMIIVPESASISQILIK 317
P + KD+IIGM+ + +++ +I + F + ++ V E + ++L+K
Sbjct: 250 PVTEDEDKDHIIGMLRVSAVMAGLGKDEAIVEQSIKPF---ISPVLEVFEGMVLEELLVK 306
Query: 318 MKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGML 377
M++E ++ DEYGGT+G++T+ED++E I+G++ + K GI K+ F +EG
Sbjct: 307 MQQESEPFVVLTDEYGGTSGIVTLEDVMEVIVGDMEEAKGPK--GIRKVALNHFIIEGSE 364
Query: 378 DLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME-GDTIVSHGYSFEVLSVDGARIKR 436
L VEEA+ + + TL G++ LLER +E GD I GY F V S++ I++
Sbjct: 365 PLLEVEEAIGVPIESPGVH-TLSGWM--LLERFDLETGDEIEHEGYRFIVRSMNKNSIRQ 421
Query: 437 LK 438
++
Sbjct: 422 VE 423
>ref|NP_465922.1| (NC_003210) similar to conserved hypothetical proteins [Listeria
monocytogenes EGD-e]
emb|CAD00477.1| (AL591983) similar to conserved hypothetical proteins [Listeria
monocytogenes]
Length = 436
Score = 218 bits (555), Expect = 1e-55
Identities = 140/422 (33%), Positives = 238/422 (56%), Gaps = 17/422 (4%)
Query: 24 LVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSL 83
L+ AFFV SEFA+V +RK + +LV + AK K++ ++ YL+A QLG TL++L
Sbjct: 12 LIAATAFFVASEFAIVAIRKPTVLQLVASEDPRAKYVKKVTSNMNDYLAACQLGNTLAAL 71
Query: 84 ALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIA 143
A+GWVGE + L LF + + E+ +S+ ++F+ ITFL+VVLGE+ PK+ I
Sbjct: 72 AMGWVGEATMRGWLEPLFLMLPVPES--VEKPISIFVSFILITFLNVVLGELAPKTFTIQ 129
Query: 144 KSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIVGE 203
+EK LF ARPL ++ + +P+ L + A+ + G+ + ELKII +
Sbjct: 130 STEKVALFIARPLVYWYRLTFPLNWLLNNSANLITRMFGVKQTVDADQMTPTELKIIFED 189
Query: 204 SLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRY 263
S R+G+++ E +KN D AKE+M PR M+ +D+ + + + + + + +
Sbjct: 190 SYRQGLLNPQEFRYMKNIFKLGDVPAKEVMIPRMSMIAIDQTATVRDLLKLTSEHTYHIF 249
Query: 264 PYCKG-SKDNIIGMVHIRDLLS-----RSIFTPKMHDFNQIVRKMIIVPESASISQILIK 317
P + KD+IIGM+ + +++ +I T + F + ++ V E + ++L+K
Sbjct: 250 PVTEDEDKDHIIGMLRVSAVMAGLGKDETIVTQSIQPF---ITPVLEVFEGMILEELLVK 306
Query: 318 MKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGML 377
M++E ++ DEYGGT+G++T+ED++E I+G++ + K GI K+ + +EG
Sbjct: 307 MQQESEPFVVLTDEYGGTSGIVTLEDVMEVIVGDMEEAKGPK--GIRKVALNHYIIEGSE 364
Query: 378 DLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME-GDTIVSHGYSFEVLSVDGARIKR 436
L VEEAL + + TL G++ LLER +E GD I GY F V S++ I++
Sbjct: 365 PLLEVEEALGVPIEGPGVH-TLSGWM--LLERFDLEAGDEIEHEGYRFIVRSMNKNSIRQ 421
Query: 437 LK 438
++
Sbjct: 422 VE 423
>ref|NP_635299.1| (NC_003901) conserved protein [Methanosarcina mazei Goe1]
gb|AAM32971.1| (AE013587) conserved protein [Methanosarcina mazei Goe1]
Length = 436
Score = 216 bits (549), Expect = 6e-55
Identities = 127/430 (29%), Positives = 234/430 (53%), Gaps = 13/430 (3%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+++ +L+ LN F +SEFALV +K RL + + G++ A+ ALK+S +LS Q+G
Sbjct: 7 VIIILVLIALNGIFAMSEFALVSAKKIRLRQKAEKGDAGAETALKLSNEPTAFLSTVQIG 66
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIH---SMSVVIAFLSITFLHVVLGE 134
ITL + G G IA L LR+ P ++S+ + L IT+L ++LGE
Sbjct: 67 ITLVGIFAGAFGGATIAGELDTY-----LRDFPALARYSATLSITLVVLIITYLTLILGE 121
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSE 194
+VPK LA+ +E A+P+ ++ P+V + L+ + + K +E
Sbjct: 122 LVPKQLALNNAETIASRVAKPMFFLSLMARPLVLVLSYSTDAVLRLLRVR-KIIGPPVTE 180
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
EE+KI++ E G+ + E +I+ D D + +MT R D++ LD ++ +EN+
Sbjct: 181 EEIKIMIEEGTEAGVFERAEMSMIEGVFDIGDRRVESLMTHRSDIIALDLDDPVDENLKK 240
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQI 314
++ + +P + D++IG+V ++D+L++ + + K+ D V K + PE+ +I ++
Sbjct: 241 MIASGRSNFPVYERDLDDVIGIVSVKDVLAKLVESGKV-DIRASVTKPLFAPEAITILKL 299
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELE 374
L K+ +H AL+ DEYG G++T+ DI+E I+G++ + ++E I LE G + ++
Sbjct: 300 LESFKETGMHIALITDEYGSVQGIITLHDILEAIVGDVRSLGEPEEEQITVLENGSWLID 359
Query: 375 GMLDLESVEEALHIEFDKECEQ---VTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
G + ++ L ++ EQ +T+ G + +L+R+P GD + +G +EV+ +DG
Sbjct: 360 GDTPVNKLKYVLSVDSFPGEEQGYYLTIAGLIMYILQRIPKTGDHMEFNGLRYEVVDMDG 419
Query: 432 ARIKRLKAVK 441
RI ++ K
Sbjct: 420 IRIDKVMVTK 429
>ref|NP_472209.1| (NC_003212) conserved hypothetical protein similar to hypothetical
hemolysin [Listeria innocua]
emb|CAC98107.1| (AL596173) conserved hypothetical protein similar to hypothetical
hemolysin [Listeria innocua]
Length = 444
Score = 215 bits (547), Expect = 1e-54
Identities = 122/438 (27%), Positives = 230/438 (51%), Gaps = 10/438 (2%)
Query: 10 DPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDT 69
+ + IL L++ +L +LNAFF +E ALV + K R++ + G+ A + K+
Sbjct: 6 ESQQIILQLILIVVLTMLNAFFASAEMALVSLNKNRVKNQAETGDKKAVMLAKLVDDPSK 65
Query: 70 YLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLH 129
+L+ Q+GITL+ +IA L ++F F +S+++ + ++++
Sbjct: 66 FLATIQVGITLAGFFSSASAATSIATRLESVFGGSS------FAKELSIIVVTIVLSYIT 119
Query: 130 VVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHD 189
+V GE+ PK LA+ KSEK + RP+ VV P V+ +K + +
Sbjct: 120 LVFGELYPKRLALQKSEKIARVSVRPIMAVGVVLRPFVKFLSFSTDILVKLTRMEKNTDN 179
Query: 190 GTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE 249
+ EE+++++ R+GII+ E ++++ + + A+E+M PR D +D E E
Sbjct: 180 EKMTREEMQLLIETGRRDGIIEVEELQMLRGVFEMDNKYAREVMVPRTDAFMIDAETESE 239
Query: 250 ENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTP-KMHDFNQIVRKMIIVPES 308
E D +L +F+R P G +D+++G++H++D + + + + D +V+ E+
Sbjct: 240 ELCDALLSENFSRVPVYTGDQDSVLGILHMKDFFAEARKSGFENIDVKSLVKNAYFAQET 299
Query: 309 ASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEE 368
I +L M++ + A+++DEYGG AG++T+ED++EEI+GEI DE D+ + + K+++
Sbjct: 300 MFIDDLLKNMQRTRNQMAILMDEYGGVAGIVTVEDLLEEIVGEIDDENDVFSDEVKKIDD 359
Query: 369 GVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSH--GYSFEV 426
F +EG + L+ + H+E T+ G+V +L +P E D +V F V
Sbjct: 360 NTFIVEGRMPLDDFNKMFHVELPARGVD-TVAGFVLTLTGTIPEEDDKVVVEYDTLRFTV 418
Query: 427 LSVDGARIKRLKAVKQDQ 444
++ AR+ ++ K Q
Sbjct: 419 EEMNDARLVSVRVEKDIQ 436
>ref|NP_466260.1| (NC_003210) conserved hypothetical protein similar to hypothetical
hemolysin [Listeria monocytogenes EGD-e]
emb|CAD00951.1| (AL591984) conserved hypothetical protein similar to hypothetical
hemolysin [Listeria monocytogenes]
Length = 444
Score = 213 bits (541), Expect = 5e-54
Identities = 123/438 (28%), Positives = 231/438 (52%), Gaps = 10/438 (2%)
Query: 10 DPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDT 69
+ + IL L++ +L +LNAFF +E ALV + K R++ + G+ A + K+
Sbjct: 6 ESQQIILQLILIVVLTMLNAFFASAEMALVSLNKNRVKSQAETGDKKAVMLAKLVDDPSK 65
Query: 70 YLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLH 129
+L+ Q+GITL+ +IA L ++F F +S+++ + ++++
Sbjct: 66 FLATIQVGITLAGFFSSASAATSIATRLESVFGGSS------FAKELSIIVVTIVLSYIT 119
Query: 130 VVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHD 189
+V GE+ PK LA+ KSEK + RP+ VV P V+ +K + +
Sbjct: 120 LVFGELYPKRLALQKSEKIARVSVRPIMAVGVVLRPFVKFLSFSTDILVKLTRMEKNTDN 179
Query: 190 GTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE 249
+ EE+++++ R+G+I+ E ++++ + + A+E+M PR D +D E E
Sbjct: 180 EKMTREEMQLLIETGRRDGVIEVEELQMLRGVFEMDNKYAREVMVPRTDAFMIDAETESE 239
Query: 250 ENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTP-KMHDFNQIVRKMIIVPES 308
E D +L +F+R P G +D++ G++H++D + + + + D +V+ E+
Sbjct: 240 ELCDALLSENFSRVPVYTGDQDSVRGILHMKDFFAEARKSGFENIDVKGLVKDAYFAQET 299
Query: 309 ASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEE 368
I +L M++ + A+++DEYGG AG++T+ED++EEI+GEI DE D+ + + K++E
Sbjct: 300 MFIDDLLKNMQRTRNQMAILMDEYGGVAGIVTVEDLLEEIVGEIDDENDVFSDEVKKVDE 359
Query: 369 GVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGD-TIVSHG-YSFEV 426
F +EG + L+ + H+E T+ G+V +L +P E D +V +G F V
Sbjct: 360 TTFIVEGRMPLDDFNKMFHVELPSRGVD-TVAGFVLTLTGTIPEEDDKVVVEYGTLRFTV 418
Query: 427 LSVDGARIKRLKAVKQDQ 444
++ AR+ ++ K Q
Sbjct: 419 EEMNDARLVSVRVEKDIQ 436
>ref|NP_051658.1| (NC_000958) hemolysin, putative [Deinococcus radiodurans]
pir||C75632 probable hemolysin - Deinococcus radiodurans (strain R1)
gb|AAF12559.1|AE001826_28 (AE001826) hemolysin, putative [Deinococcus radiodurans]
Length = 437
Score = 212 bits (540), Expect = 6e-54
Identities = 133/429 (31%), Positives = 235/429 (54%), Gaps = 15/429 (3%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQR---LDTYLS 72
L +++ LV+LN FV +EFALV +++RL+ L + GN A+ L + R D Y++
Sbjct: 7 LPVVIILALVVLNGLFVAAEFALVGAKRSRLQTLAEGGNGAARWLLGVFDRPTGKDGYIA 66
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
QLGITL+S+ LG GEPA+A+ L FE L + H++ V+A SITF+HVV
Sbjct: 67 VAQLGITLASIGLGMYGEPAVARWLYGPFEKWGLSHDTA--HTVGFVVALSSITFMHVVF 124
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGT- 191
GE++PK+LA+ E+ +L + VF ++F P V + + +A ++ + I + T
Sbjct: 125 GEMIPKALALQAPEQMSLSVNPLMRVFGLIFRPFVAVLNFLALGLMRLLRIPEPDKSATL 184
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
++ +EL I+ E G + V+ ++I N + + +A+E+MT R M L ++
Sbjct: 185 YTSKELAIVTEEVADSGQLGDVQRDLIHNIFELEERTAEELMTSRSRMEVLSVRALSQDV 244
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
+ +RYP + + D+IIG++HI+D + R+ + ++ D +++VR + V +A
Sbjct: 245 ATRIAASPRSRYPVFEDNLDHIIGVLHIKDFM-RAQASGRVPDLSRLVRPLPSVAATAKA 303
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMG--EISDEYDLKQEGINKLEEG 369
++L K+E++H ALV DE+GGT G +TM+D+I ++M E SD + +++ G +G
Sbjct: 304 EELLSMFKRERVHAALVADEFGGTLGFVTMDDLIADVMDEEEESDGFWIQENG-----DG 358
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSV 429
L+G + L + + + + T+ G + + +P G T+ G V V
Sbjct: 359 SLTLDGEVTLSELRDDYGLPLG-SMDVSTVAGLILAQTGTVPASGVTVHVQGVDLTVEEV 417
Query: 430 DGARIKRLK 438
+I R++
Sbjct: 418 SELKITRVR 426
>ref|NP_627955.1| (NC_003888) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
emb|CAC10303.1| (AL442629) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 459
Score = 209 bits (531), Expect = 7e-53
Identities = 136/431 (31%), Positives = 227/431 (52%), Gaps = 13/431 (3%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
+L+L++A LL L A FV +EF+L V ++ LE + G A AL+ + L LS
Sbjct: 4 VLLLLLALLLTLACALFVAAEFSLTTVERSDLERAAESGERGADGALRAVRSLTLQLSGA 63
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGIT++SL +G + EP+IA LL +M L +++ ++ + T + +V+GE
Sbjct: 64 QLGITVTSLVIGMLAEPSIAVLLRGPLTAMGLGG---AASTVATLLGVVLSTVVLMVVGE 120
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH-DGTHS 193
+VPK+ AI++ A P F F P +R + A+ F+++ G+ P E S
Sbjct: 121 LVPKNWAISRPLAVAKVVAGPQRGFTTAFGPFIRHLNNTANRFVRRFGLEPAEELASVRS 180
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EEL + S EG +++ E+ S+ +A+ +MTPR D+ L+ + + +
Sbjct: 181 AEELVALAQHSAAEGALEADSAELFVRTLHLSELTAENVMTPRVDVKALEAHATAADAAN 240
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
+ +R+P + S D ++G VHIRD+L+ + ++ ++VP+S +
Sbjct: 241 LSHATGLSRFPVYRDSLDEVVGTVHIRDVLALEPEKRRATPVTELATAPLLVPDSLPADR 300
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEY------DLKQEGINKLE 367
+L +M+ + A+VIDEYGGTAG+ T+EDI+EE++GE+ DE+ DL +
Sbjct: 301 LLERMRASRT-MAVVIDEYGGTAGVATVEDIVEEVVGEVRDEHDPVEIPDLLPAPADPDG 359
Query: 368 EGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVL 427
+E +G L L+ +E + E TL G V + L R+P +GD + G+ +VL
Sbjct: 360 RAAWEADGSLRLDHLERIGLTAPEGPYE--TLAGLVATHLTRIPAKGDVVALDGWRIDVL 417
Query: 428 SVDGARIKRLK 438
VD R RL+
Sbjct: 418 DVDHHRADRLR 428
>ref|NP_600666.1| (NC_003450) COG1253:Hemolysins and related proteins containing CBS
domains [Corynebacterium glutamicum]
dbj|BAB98842.1| (AP005278) Uncharacterized CBS domain-containing proteins
[Corynebacterium glutamicum ATCC 13032]
Length = 460
Score = 207 bits (526), Expect = 3e-52
Identities = 135/406 (33%), Positives = 214/406 (52%), Gaps = 8/406 (1%)
Query: 14 SILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKI-GNSNAKLALKMSQRLDTYLS 72
SIL L+ LL FV EFAL + K+ +E VK G+S+A+ + Q L LS
Sbjct: 6 SILSLLGFVLLTASTGLFVAIEFALTGLEKSTVETHVKQKGDSSARAVQRDHQNLSFVLS 65
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
QLGIT+++LA G++ EP +AK E + L E+ +++++IA L T L +V
Sbjct: 66 GAQLGITITTLATGFLAEPVLAKFFTPALELVGLNESAS--SAVALIIALLVATTLSMVF 123
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH-DGT 191
GE+VPK+ AI F P++ F +V P + + A+F ++K+GI P E
Sbjct: 124 GELVPKNWAITNPLGVARFVVHPVNWFNMVLKPFINGMNKSANFIVRKLGIEPAEELASA 183
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
S +EL +V S G +D +I + F D +A E MTPR + L ++ +
Sbjct: 184 RSSQELTALVRSSAESGGLDQNTAAVINRSLQFGDATADEFMTPRSTIESLRATDTVNDL 243
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
I++ L+ +R+P +G D IGMVHI+D S + RK+ +VP S
Sbjct: 244 IELALETGHSRFPVTEGDLDETIGMVHIKDAFSVVQAERATTMVRDLARKIPVVPASLDG 303
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGV- 370
+L ++ LV DEYGGTAG++T+ED++EEI+GEI DE+D + + G
Sbjct: 304 DSVLNAVRSAGSQVILVADEYGGTAGMVTIEDVVEEILGEIHDEHDDSDAERDFQQFGAS 363
Query: 371 FELEGMLDLESVEEAL-HIEFDKECEQVTLGGYVFSLLERMPMEGD 415
+E+ G++ ++ +E+ + ++ D E TLGG + + +P GD
Sbjct: 364 WEVSGLVRIDELEKRVGYVSPDGPYE--TLGGLIMYTVGAIPRVGD 407
>ref|NP_560946.1| (NC_003366) probable hemolysin-related protein [Clostridium
perfringens]
dbj|BAB79736.1| (AP003185) probable hemolysin-related protein [Clostridium
perfringens]
Length = 421
Score = 205 bits (521), Expect = 1e-51
Identities = 130/443 (29%), Positives = 240/443 (53%), Gaps = 24/443 (5%)
Query: 9 LDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLD 68
+DP ++L++ +L++L+ FF SE AL+ + + R+ +V AKL K+ + +
Sbjct: 1 MDPYTFQIVLLI--ILIILSGFFSASETALMALSRIRVRHMVDEEIKGAKLLEKLLEDPN 58
Query: 69 TYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFL 128
L +G + + +G ++A LA V +A +T L
Sbjct: 59 KLLGGILIGNNIVN-----IGASSLASTLAFRI-----------FGDGGVALATGVMTIL 102
Query: 129 HVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH 188
++ GEI PKSLA +EK +L A +++ VF P+V LF ++ ++ +G + +
Sbjct: 103 VLIFGEITPKSLAKQNAEKVSLAVAPIINIVVTVFKPLVWLFSSVSSLIVRLLGGDLNKS 162
Query: 189 DGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSY 248
+ +EEELK +V S EG+++ E E+I N +F D K+IM R +++ ++ +Y
Sbjct: 163 EPFITEEELKTMVDVSEEEGVLEVEEKEMIFNVFEFGDLQVKDIMVQRVNVIAVNVTATY 222
Query: 249 EENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFN--QIVRKMIIVP 306
EE + ++ + F+R P S D+I+G+++++DL+ + +FN + +R+
Sbjct: 223 EEVLKVIKEQQFSRIPVYNESIDDIVGILNVKDLI---LLDSDEENFNVTEYMREPFRTF 279
Query: 307 ESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL 366
E I+++ +MK + H A+V+DEYGGT G++T+ED+IEEI+G+I DEYD + + I +
Sbjct: 280 EFKKITELFAEMKTTRNHIAVVLDEYGGTVGIVTIEDLIEEIVGDIEDEYDERDKDIEVI 339
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEV 426
+E F ++G L + + + E + E E ++GGYV L RMP G+ I ++ + V
Sbjct: 340 KENEFVVDGSTRLSDLSDMIGFEIESE-EFDSIGGYVIGYLGRMPKVGEEIKTNDFRVIV 398
Query: 427 LSVDGARIKRLKAVKQDQGENEA 449
+D R+K+++ + + E+
Sbjct: 399 EELDRNRVKKVRVYTYKREKEES 421
>ref|NP_661441.1| (NC_002932) CBS domain protein [Chlorobium tepidum TLS]
gb|AAM71783.1| (AE012829) CBS domain protein [Chlorobium tepidum TLS]
Length = 439
Score = 198 bits (504), Expect = 9e-50
Identities = 124/432 (28%), Positives = 224/432 (51%), Gaps = 13/432 (3%)
Query: 23 LLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSS 82
LL+L+N F +SE AL+ +++RL +L + G+ A A+K+ +LS Q+G+T+
Sbjct: 9 LLILINGLFAMSEMALITAKRSRLAKLAEDGDKAAAAAIKLGHEPTQFLSTVQIGLTVIG 68
Query: 83 LALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAI 142
+ G++GE + LAA E +P H ++ V+ + IT++ +V+GE+VPK L
Sbjct: 69 VLNGFIGESSFTPPLAAALELYG-GWDPKTSHIIATVLVVIVITYITIVIGELVPKRLGQ 127
Query: 143 AKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTH---SEEELKI 199
E ARP+ + P VRL L+ MG +H+ T +EEE+
Sbjct: 128 TDPEGIARNVARPMQILATATRPFVRLLSASTDAILRLMG----KHEQTQPSVTEEEIHA 183
Query: 200 IVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGH 259
++ E GII+ E E+++N D +M PR D++ LD EEN+ V++
Sbjct: 184 MLEEGSVAGIIEQQEHEMVRNVFRLDDRQLGSLMVPRADIIYLDTALPLEENMKRVVESE 243
Query: 260 FTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMK 319
+R+P C +++G+V+ + LL+++I + + + ++ + VPE+ + ++L +
Sbjct: 244 HSRFPVCHNGLQSLLGVVNAKQLLAQTI-KGGVTNLAEHLQPCVYVPETLTGMELLDHFR 302
Query: 320 KEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDL 379
V+DEYG GL+T++D++E + GE + +L+ + E+G + L+G++ +
Sbjct: 303 TSGTQMVFVVDEYGEIQGLVTLQDMLEAVTGEFA-PLNLEDAWAVQREDGSWLLDGLIAV 361
Query: 380 ESVEEALHIEFDKECEQ---VTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKR 436
+++ L + E E+ TL G + LL R+P GD + EV+ +D RI +
Sbjct: 362 PELKDTLGLRAVPEEEKGVYHTLSGMIMWLLGRLPQTGDITFWENWRLEVIDMDSKRIDK 421
Query: 437 LKAVKQDQGENE 448
+ A K D E
Sbjct: 422 VLATKIDNQPTE 433
>ref|NP_624578.1| (NC_003888) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
pir||T37161 probable integral membrane protein - Streptomyces coelicolor
emb|CAB53286.1| (AL109972) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 445
Score = 198 bits (503), Expect = 1e-49
Identities = 124/407 (30%), Positives = 220/407 (53%), Gaps = 6/407 (1%)
Query: 13 ESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLS 72
E+ L ++ F+L +FV EFA V + L + G+ A AL++ +RL LS
Sbjct: 5 EAWLGVLAVFVLTAGTGYFVAQEFAYVSADRLALARQAEEGDKKAARALRVLERLSFMLS 64
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
QLGIT++ L +G++ EP+++ LL + + + + + +SVV+AF+ T + +VL
Sbjct: 65 GAQLGITVTGLVVGFIAEPSVSALLRPVLSGVGIPDGA--VTGISVVLAFVLATVVQMVL 122
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKE--HDG 190
GE+ PK+LAIA E+ A + V PVVR+FD A+ L+ +GI P E H G
Sbjct: 123 GELAPKNLAIAVPERLAKALAGSTLGYLKVVGPVVRIFDGAANRLLRGVGIEPVEELHHG 182
Query: 191 THSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEE 250
+ EEL ++GES +G + +++ +A +FS+ + E+M PR D V + ++ + E
Sbjct: 183 A-TLEELGHLIGESHEQGELPRGTAQLLDHALEFSERTLHEVMVPRADAVFVRKDATAAE 241
Query: 251 NIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESAS 310
+ ++ + + YP D++ G++ +R+L+ R+ +++P++
Sbjct: 242 AVTLIARHGHSNYPVLGDHPDDVAGVLGVRELMGLPAGQFTATTAGAAARRPLLLPDTLP 301
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGV 370
+ + +M+++ A+V+DE+GG AG++T EDI EE++G+I+DE D EG
Sbjct: 302 LPDAVERMREDDDEFAVVLDEHGGVAGVVTYEDIAEELVGDIADESDTVTAVAVADGEG- 360
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTI 417
+ ++ L+ V EA +E +E + T+ G V L R P GD +
Sbjct: 361 WLVDAGRRLDEVAEATGVELPEEDDYETVAGLVVDRLGRFPAIGDRL 407
>ref|NP_051659.1| (NC_000958) hemolysin, putative [Deinococcus radiodurans]
pir||D75632 probable hemolysin - Deinococcus radiodurans (strain R1)
gb|AAF12560.1|AE001826_29 (AE001826) hemolysin, putative [Deinococcus radiodurans]
Length = 433
Score = 197 bits (501), Expect = 2e-49
Identities = 132/439 (30%), Positives = 236/439 (53%), Gaps = 18/439 (4%)
Query: 14 SILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLAL---KMSQRLDTY 70
+++ L+V ++V +NA +V +EFA V R++R++E + GNS A L K +RLD Y
Sbjct: 3 ALVPLLVILVMVAVNALYVAAEFATVGSRRSRVQEAAEAGNSAAGRLLHILKDPKRLDNY 62
Query: 71 LSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHV 130
++A Q GITLSSL G G+ + LL F +++V++ + IT L V
Sbjct: 63 VAACQTGITLSSLVAGSYGQAQLTPLLTPYFGEAG--------QAVAVLVVLVLITILQV 114
Query: 131 VLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKE-HD 189
VLGE++PK++A+ E+ L P+ + +F P++ LF+ A +K + ++ H
Sbjct: 115 VLGELLPKTVALRYPERLALATLVPMQLSQWLFTPLIALFNGTAFALMKGLKLSADHSHA 174
Query: 190 GTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE 249
HS EEL+ + ES G+ID+ E +++ + + +EIM+ R ++ +
Sbjct: 175 HIHSPEELEGLYRESAAGGLIDAEERDMLAGVLNVENRIVREIMSARTKLLTVPVNVPVA 234
Query: 250 ENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESA 309
+ + + ++R+P +G D I+G+VH+R L + TP + + ++ +IV E
Sbjct: 235 DALRSLAGSPYSRFPVTQG--DEIVGVVHLRRLYLAAQRTP-LAPVSSVMVSPLIVAEVM 291
Query: 310 SISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEG 369
S+ + +++ H+ALV++EYG G++T+ED +EEI GE+ DE+D ++E I + G
Sbjct: 292 SVPDLWTHLRESGRHSALVVNEYGTVIGMVTLEDALEEIFGELQDEFDQEEEPIT-VSGG 350
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSV 429
+ G + LE++ L ++ + E T+ G ++ L R+P+ GD IV S L V
Sbjct: 351 RVSVRGDVLLETLNSRLSLKLPTD-EVDTVSGLLWLELGRLPLVGDEIVIEPTSLR-LRV 408
Query: 430 DGARIKRLKAVKQDQGENE 448
D + ++ D E +
Sbjct: 409 DAVERRAIRRASFDLPETD 427
>ref|NP_419183.1| (NC_002696) CBS domain protein [Caulobacter crescentus CB15]
gb|AAK22351.1| (AE005709) CBS domain protein [Caulobacter crescentus CB15]
Length = 437
Score = 196 bits (498), Expect = 5e-49
Identities = 124/424 (29%), Positives = 221/424 (51%), Gaps = 4/424 (0%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
++ L+V LVLLN F +SE A+V RK RL+ + G+ AKLAL+MS+ +LSA
Sbjct: 3 LVSLVVVLFLVLLNGVFSMSELAVVSARKARLQGFAERGDRGAKLALEMSEHPTRFLSAV 62
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
Q+GITL + G G+ IA L A E+ + + +++ + + +T++ V+LGE
Sbjct: 63 QVGITLIGIFAGAYGQATIAAALDAWLEA-SVPALAKYSEAIATTLVVIGLTYVSVILGE 121
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSE 194
+VPK LA+ + A L V V P V L V L+ MG+ + + SE
Sbjct: 122 LVPKRLALIFPDAIARRMAPFLAVVATVLRPFVTLLTVSTAAVLRLMGVRDERNTSVTSE 181
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI-D 253
E ++ ++ E G+I+ E +I+ D + MTPR+D+ + + E + +
Sbjct: 182 E-VEAVLAEGADAGLIEPEERSMIQEVLRLGDRPVRVAMTPRRDLFWVSLADDTETVLKE 240
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
I H +G D +G++ +DLL + + D V++ + +PE+ S+ +
Sbjct: 241 IRASAHSRIVVATEGDLDGDVGVLLKKDLLDACLSGEPL-DLKAHVQQPLAIPETMSLLK 299
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFEL 373
L K +H ALV+DE+G G +T D++E I G+ +++D ++ I + E+G + +
Sbjct: 300 ALQLFKSTSLHMALVVDEFGSLQGAITPLDLLEMIAGDFPEDHDDDEKRIIRREDGGWLI 359
Query: 374 EGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGAR 433
+ LD++ + + L F+ + T+ G + L R+P EG+ + G+ E++ +DG+R
Sbjct: 360 DARLDIQELNDHLGENFEADGGYHTVAGLILDRLGRLPTEGEHVEIGGFDLEIVDMDGSR 419
Query: 434 IKRL 437
I ++
Sbjct: 420 IDKV 423
>ref|NP_625539.1| (NC_003888) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
emb|CAC01475.1| (AL391014) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 468
Score = 196 bits (497), Expect = 6e-49
Identities = 126/431 (29%), Positives = 225/431 (51%), Gaps = 14/431 (3%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
+L+L+VA LL L FV +EF+L V + LE G A ALK + L LS
Sbjct: 4 VLLLLVAILLSLACGAFVAAEFSLTTVERGELERAAARGERGAASALKGVRNLTFQLSGA 63
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGIT+++L +G + EP++A L+A E DL + S+++V+ T +++GE
Sbjct: 64 QLGITVTNLVVGMLAEPSVAALIAGPLE--DLGVSRSAASSLALVLGTALSTVFLMIVGE 121
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH-DGTHS 193
+VPK+ AI+ P F VF P + + A+ +++ G+ P E
Sbjct: 122 LVPKNWAISSPLAVAKRVGGPQRWFSAVFRPFITHLNNTANRVVRRFGVEPAEELASARG 181
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
+EL + S +EG +++ E+ + +D +A+++MTPR +V LD + E+ +
Sbjct: 182 PQELAALARHSAKEGALEADTAELFVRTLNLADLTAQQVMTPRVQVVALDVRATCEDVAN 241
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
+R+P + D ++G H++D+L+ +++R+ ++VPES ++ +
Sbjct: 242 ATRATGLSRFPVYQDGLDAVVGTAHVKDVLAVPAERRPTMPVAELMREPLLVPESLTVDR 301
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEY------DLKQEGINKLE 367
+L ++ + A+VIDEYGGTAG+ T+EDI+EE++G++ DE+ DL G ++
Sbjct: 302 LLDRLSGRRT-MAVVIDEYGGTAGVATLEDIVEEVVGQVRDEHDPHETPDLDPAGTDEAG 360
Query: 368 EGVFELEGMLDLESVEE-ALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEV 426
++ +G ++ +E L + E T+ G V + L R+P GD++ G+ +V
Sbjct: 361 HALYWADGSARVDRLERLGLRV---PEGPYETVAGLVAAGLGRIPAVGDSLDVAGWRLDV 417
Query: 427 LSVDGARIKRL 437
+ G R R+
Sbjct: 418 VDATGRRAARV 428
>ref|NP_267971.1| (NC_002662) transport protein [Lactococcus lactis subsp. lactis]
gb|AAK05912.1|AE006411_7 (AE006411) transport protein [Lactococcus lactis subsp. lactis]
Length = 449
Score = 191 bits (485), Expect = 2e-47
Identities = 126/442 (28%), Positives = 225/442 (50%), Gaps = 26/442 (5%)
Query: 10 DPSESILMLMVAFLLVL--LNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRL 67
DP ++L + L+ L LNAFF SE A+V + +T++E+ G+ + + +
Sbjct: 5 DPESVSILLQILLLIFLTALNAFFSASEMAMVSLSRTKVEQKASEGDKKYINLVNILNQP 64
Query: 68 DTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITF 127
+LS Q+GITL ++ G A++ LA L L + +++ +I +T+
Sbjct: 65 SNFLSTIQIGITLINILAGASLAEALSSRLAPLLGGTALAK------TLAQIIVLAVLTY 118
Query: 128 LHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKE 187
+ +V GE+ PK +A EK L A P+ V P V +F + + +
Sbjct: 119 VSLVFGELYPKRIAQNLKEKLALRVAPPIQFLGKVMKPFVWFLASSTNFLSRLTPMKFDD 178
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
D + +E++ ++ + + +D+ E E+I + A+EIM PR D +D +
Sbjct: 179 LDEGMTRDEIEYLLNTN--DEALDANEREMITGVFSLDELVAREIMVPRTDAFMIDINDD 236
Query: 248 YEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFN--QIVRKMIIV 305
ENI +L ++R P KDNI+G++H++ LL S F D + +I+++ + V
Sbjct: 237 SRENITAILSETYSRVPVYDDDKDNILGILHVKKLLRYS-FDHGFDDIDLREILQEPLFV 295
Query: 306 PESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINK 365
PE+ + ++ +M+K Q A++++EYGG G++T+ED++EEI+GEI DE D+ +E + K
Sbjct: 296 PETIFVDDLMRQMRKTQNQMAVLLNEYGGVEGVVTLEDLLEEIVGEIDDETDIAEEEVFK 355
Query: 366 LEEGVFELEGMLDLESVEEALHIEFDKECEQ---VTLGGYVFSLLERMPMEGDTIV---- 418
+ E ++ ++G + L E EFD E T+ GY + ++P +G IV
Sbjct: 356 IGENLYVVQGKMTLNDFNE----EFDTHLESNDVDTIAGYFLATTGKIPAKGQQIVCKVD 411
Query: 419 --SHGYSFEVLSVDGARIKRLK 438
+S L V G R+ +L+
Sbjct: 412 NDEDHFSLTSLEVSGKRVVKLR 433
>ref|NP_298569.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
pir||F82702 conserved hypothetical protein XF1280 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF84089.1|AE003961_13 (AE003961) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 453
Score = 191 bits (485), Expect = 2e-47
Identities = 126/439 (28%), Positives = 224/439 (50%), Gaps = 13/439 (2%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
+ L++ L+ LN FF +SE +L+ RK+RL+++ AK AL ++Q +++LS
Sbjct: 16 VFELLIVIALIFLNGFFAMSEMSLMTSRKSRLKQMANSSKHAAK-ALTLAQSPESFLSTV 74
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLS---ITFLHVV 131
Q+GITL + G G AI + ++ P S++ LS ITFL ++
Sbjct: 75 QIGITLIGILTGLFGGDAIGAAIGQWLTTL----TPQLGEYTSIIGKTLSVALITFLTLI 130
Query: 132 LGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGT 191
GE+VPK LA+ SE A P+ + + P V + L+ +G K
Sbjct: 131 FGELVPKRLALTHSENIASTIAVPMSLLARIAAPGVWVLAKSTQLVLRVLGFG-KIPSSA 189
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
+EEE++++V ES G+ID E ++ D +A +MTPR + LD N
Sbjct: 190 VTEEEIRMLVAESHEAGVIDDYERNMMNRVMRLGDRTADSLMTPRNRIAWLDNSADLGHN 249
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
++I+ + F+RYP + S +I+G++ ++ +++R + F ++ + + V ES
Sbjct: 250 LEIMREHQFSRYPVYRSSDQDIVGILEVKSVITRLDSQTTLSLFQELC-EPVFVSESTHA 308
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGIN-KLEEGV 370
++L ++EQ ALV+DEYG GL+T+ D++ ++G + + + ++ + E+G
Sbjct: 309 LKLLEIFREEQQSMALVVDEYGEILGLVTISDLMGAVIGRLQNVENTDEDALMVTREDGS 368
Query: 371 FELEGMLDLESVEEALHIEFD--KECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLS 428
F ++G L +E + E L E +E TL G S R+P G+ G+ E++
Sbjct: 369 FLIDGTLPIEELREVLGAELPDAEENNYHTLAGMCISYFGRIPHVGEYFDWAGWRIEIVD 428
Query: 429 VDGARIKRLKAVKQDQGEN 447
+DGARI +L + ++ +N
Sbjct: 429 LDGARIDKLLLQRLNKEKN 447
>ref|NP_228654.1| (NC_000853) hemolysin-related protein [Thermotoga maritima]
pir||F72326 hemolysin-related protein - Thermotoga maritima (strain MSB8)
gb|AAD35927.1|AE001751_7 (AE001751) hemolysin-related protein [Thermotoga maritima]
Length = 455
Score = 191 bits (484), Expect = 2e-47
Identities = 137/447 (30%), Positives = 228/447 (50%), Gaps = 26/447 (5%)
Query: 10 DPSESILML----MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQ 65
DP S+L L ++ +L+ L+ FF SE AL + K +++E ++ K A +
Sbjct: 3 DPVSSVLTLGLESLLLVILIYLSNFFSSSETALTLMSKVKIKEFLE--EKEEKSAKESYI 60
Query: 66 RL-DTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLS 124
L + YL+ + L +L + LL + E V++ L
Sbjct: 61 HLFNKYLTTILISNNLVNLLASSISTLIFLNLLRNMSEEF------------VAVVSTLF 108
Query: 125 ITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGIN 184
IT + ++ GEI PK LA + E+ + + V P+ RL IA +
Sbjct: 109 ITTILLIFGEITPKVLARSDPERVFRRSIGVIRFLTRVLDPIGRLLVKIADGIISLRHGK 168
Query: 185 PKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDE 244
D +EE++ IV G+I+ E IIK A + + KEIMTPR D+V ++E
Sbjct: 169 KVSEDLFITEEDIVSIVQVGGEMGVIEEEEERIIKRAFEMKQIAVKEIMTPRVDIVAIEE 228
Query: 245 ENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLS----RSIFTPKMHDFNQIVR 300
+ ++ I++V ++R P K + DNI+G+ + +D+LS + K I+R
Sbjct: 229 NQTVKDLIELVEDEGYSRIPVYKETIDNIVGICYAKDVLSMLAEKDCEEVKSMKVKDIMR 288
Query: 301 KMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ 360
+ + VPE+ +I ++L +K +IH A+V+DEYGGTAG++T+EDIIEE+ G I DEYD +
Sbjct: 289 EALYVPETMNIDELLKILKARKIHIAIVVDEYGGTAGIVTLEDIIEELFGNIMDEYDYDE 348
Query: 361 -EGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVS 419
GI K++E + ++G + +E L ++F E E T+ GY+ +R+P G+ V
Sbjct: 349 ISGIRKIDERTYIVDGATPINDIEMELRVQF-PETEYETIAGYLLEHFKRIPNVGEEAVI 407
Query: 420 HGYSFEVLSVDGARIKRLKAVKQDQGE 446
F+VL+V RI+++ +K +GE
Sbjct: 408 GNLYFKVLAVGKNRIEKV-MIKILEGE 433
>ref|NP_662876.1| (NC_002932) CBS domain protein [Chlorobium tepidum TLS]
gb|AAM73218.1| (AE012950) CBS domain protein [Chlorobium tepidum TLS]
Length = 448
Score = 189 bits (479), Expect = 8e-47
Identities = 120/427 (28%), Positives = 223/427 (52%), Gaps = 11/427 (2%)
Query: 19 MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGI 78
++ LL+L L+EFA++ RL EL + G +A +ALK+ +LS+ ++
Sbjct: 9 IIIILLILFEGVLSLAEFAIISSSPARLRELREAGYPSASVALKLQDNAARFLSSIKVTA 68
Query: 79 TLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPK 138
L + +G +A+ LAALF + + E + H +++ + S+ +L V+G ++PK
Sbjct: 69 ILITTLTSVLGGLFLAEPLAALFSHLAILEP--YSHPLALTVVIASLAYLTHVIGGLLPK 126
Query: 139 SLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELK 198
A+ E + A ++ + P V L D A L+ GI E S+E++
Sbjct: 127 KFALRHPEAIAVRIAGFMNKLCTISSPAVLLADASAALLLRAFGIEANEKPQV-SDEDVM 185
Query: 199 IIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKG 258
+++ + ++G+ +SVE E+I SD A +MTPR ++ LD E EE + +
Sbjct: 186 LMIRQGAKKGVFESVEYEMISRIFRMSDKRASALMTPRNEIEWLDLERPDEELVARIKAS 245
Query: 259 HFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPK--MHDFNQIVRKMIIVPESASISQILI 316
+R+P KGS D + G+V DL++ S+ + ++ + VPES +L
Sbjct: 246 GRSRFPVAKGSLDELQGVVRSLDLVNFSLSSKGSIREAIRASMKPPLFVPESVPAFHVLE 305
Query: 317 KMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEI-SDEYDLKQEGINKLEEGVFELEG 375
KK + H ALVIDE+G G +T+ D++E I+G++ +D+ + Q+ I + E + ++G
Sbjct: 306 LFKKNRAHMALVIDEHGSVQGAITLTDVLESIVGDVPADDMEGDQKTIVRRSERTWLVDG 365
Query: 376 MLDLESVEEALHIEFDKECEQ-----VTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVD 430
M+ ++ A +++ +K E+ T+GG++ + L +P DT+ G +F+V+ ++
Sbjct: 366 MVPVDEFLTAFNLDAEKFFEENEPRYDTMGGFMMTRLGEVPSVSDTVKWGGLTFKVIKMN 425
Query: 431 GARIKRL 437
G R+ R+
Sbjct: 426 GKRVGRI 432
>ref|NP_637059.1| (NC_003902) hemolysin [Xanthomonas campestris pv. campestris str.
ATCC 33913]
gb|AAM40983.1| (AE012270) hemolysin [Xanthomonas campestris pv. campestris str.
ATCC 33913]
Length = 436
Score = 186 bits (471), Expect = 6e-46
Identities = 121/422 (28%), Positives = 215/422 (50%), Gaps = 8/422 (1%)
Query: 19 MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGI 78
++ L+LLN FF +SE +L+ RK+RL+++ + A AL +++ + +LS Q+GI
Sbjct: 5 LIVIALILLNGFFAMSEMSLMTSRKSRLKQMAG-SSKRAARALALAESPENFLSTVQIGI 63
Query: 79 TLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPK 138
TL + G G AI + + + +P + + +A ITFL ++ GE+VPK
Sbjct: 64 TLIGILTGVFGGEAIGIAIGTWLQGIVPALDP-YAPVIGKTLAVALITFLTLIFGELVPK 122
Query: 139 SLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELK 198
LA+ SE A P+ + P V + L+ +G+ K+ + SEEE++
Sbjct: 123 RLALRNSEDIAGVVAVPMAWLAKIAAPGVWVLARSTRLVLRMLGMG-KDESASVSEEEIR 181
Query: 199 IIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKG 258
++V ES G+ID+ E +++ D +A +MTPR + LD E N+ ++ +
Sbjct: 182 MLVAESHEAGVIDAHERDMMNRVMRLGDRTADSLMTPRNRIAWLDANAEPERNLHVMREH 241
Query: 259 HFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKM 318
F+RYP +GS +I G++ ++ L++R Q +R + V ES ++L
Sbjct: 242 EFSRYPVYRGSDQDIAGVLEVKSLVTR--MDGHGAQLFQNLRDTLFVSESTHAMKLLEIF 299
Query: 319 KKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG-INKLEEGVFELEGML 377
++EQ ALV+DEYG GL+T+ D++ ++G + + + + +G ++G L
Sbjct: 300 REEQQSMALVVDEYGEIRGLVTISDLMGAVVGRLQSVENTDDDALVVTRADGSLLIDGSL 359
Query: 378 DLESVEEALHIEFDK--ECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIK 435
+E + E L E + E + TL G R+P G+ G+ E++ +DGAR+
Sbjct: 360 PVEELREVLGAELPEADEGDYHTLAGLCIYYFGRIPQAGEFFDWAGWRIEIVDLDGARVD 419
Query: 436 RL 437
+L
Sbjct: 420 KL 421
>ref|NP_642040.1| (NC_003919) hemolysin [Xanthomonas axonopodis pv. citri str. 306]
gb|AAM36576.1| (AE011803) hemolysin [Xanthomonas axonopodis pv. citri str. 306]
Length = 446
Score = 185 bits (470), Expect = 8e-46
Identities = 130/434 (29%), Positives = 223/434 (50%), Gaps = 22/434 (5%)
Query: 19 MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGI 78
++ L++LN FF +SE +L+ RK+RL+++ + A AL +++ + +LS Q+GI
Sbjct: 5 LIVIALIVLNGFFAMSEMSLMTSRKSRLKQMAG-SSKRAARALALAESPENFLSTVQIGI 63
Query: 79 TLSSLALGWVGEPAIAKLLA--------ALFESMDLRENPIFIHSMSVVI----AFLSIT 126
TL + G G AI + +A AL + +L P SVVI A IT
Sbjct: 64 TLIGILTGVFGGEAIGEAIASWLQGVFPALAGTFELVGKP---RPYSVVIGSTLAVALIT 120
Query: 127 FLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK 186
FL ++ GE+VPK LA+ SE A P+ + P V + L+ +G+ K
Sbjct: 121 FLTLIFGELVPKRLALRNSEDIAGVVAVPMAWLAKIAAPGVWVLARSTRLVLRMLGMG-K 179
Query: 187 EHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEEN 246
+ + +EEE++++V ES G+ID+ E +++ D +A +MTPR + LD
Sbjct: 180 DESASVTEEEIRMLVAESHEAGVIDAHERDMMNRVMRLGDRTADSLMTPRNRIAWLDANA 239
Query: 247 SYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVP 306
E N+ I+ + F+RYP +GS +I G++ ++ L++R + H F Q +R + V
Sbjct: 240 EPERNLQIMREHEFSRYPVYRGSDQDIAGVLEVKSLVTR-MDGHGAHLF-QALRDTLFVS 297
Query: 307 ESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG-INK 365
ES ++L ++EQ ALV+DEYG GL+T+ D++ ++G + + ++ +
Sbjct: 298 ESTHAMKLLEIFREEQQSMALVVDEYGEIRGLVTISDLMGAVVGRLQAVENTDEDALVVT 357
Query: 366 LEEGVFELEGMLDLESVEEALHIEFD--KECEQVTLGGYVFSLLERMPMEGDTIVSHGYS 423
+G ++G L +E + E L E E + TL G R+P G+ G+
Sbjct: 358 RADGSLLIDGSLPVEELREVLGAELPDADEGDYHTLAGLCIYYFGRIPQAGEFFDWAGWR 417
Query: 424 FEVLSVDGARIKRL 437
E++ +DGAR+ +L
Sbjct: 418 IEIVDLDGARVDKL 431
>ref|NP_280939.1| (NC_002607) hemolysin protein; Hlp [Halobacterium sp. NRC-1]
gb|AAG20419.1| (AE005114) hemolysin protein; Hlp [Halobacterium sp. NRC-1]
Length = 457
Score = 185 bits (470), Expect = 8e-46
Identities = 121/422 (28%), Positives = 211/422 (49%), Gaps = 18/422 (4%)
Query: 23 LLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSS 82
+L++L+AFF SE A+ + + R++ LV+ G S A + L +G L +
Sbjct: 32 VLMVLSAFFSSSEIAMFSIPRHRIDALVEEGRSGADAVAALKSDPHRLLITILVGNNLVN 91
Query: 83 LALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAI 142
+A+ + A ++ +V+ A +T L ++ GE PKS A+
Sbjct: 92 IAMSSIATGLFATSMS---------------QGKAVLAATFGVTALVLLFGESAPKSYAV 136
Query: 143 AKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIVG 202
SE L A+PL YP+V LFD + + G + E++ ++
Sbjct: 137 ENSESWALSIAKPLQWSERFLYPLVVLFDYLTRAVNQFTGGRAAIESSYVTRSEIQDMIK 196
Query: 203 ESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTR 262
REG+I+ E E+++ F++T AKE+MTPR D+V + + ++ E I + R
Sbjct: 197 TGEREGVIEEDEREMLQRIFRFNNTIAKEVMTPRLDVVAVSKTDTIEAAIQTCTQAGHER 256
Query: 263 YPYCKGSKDNIIGMVHIRDLLSRSIF-TPKMHDFNQIVRKMIIVPESASISQILIKMKKE 321
P G DN+IG+V + DL+ S++ + + + ++ + VPES ++ +L +M+ E
Sbjct: 257 VPVYDGELDNVIGVVSLEDLVRESLYGETEDAELDDLIEPTLHVPESKNVDDLLQEMQDE 316
Query: 322 QIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLES 381
++ +VIDE+G T GLLT EDI EEI+GEI D + I+ ++E + G +++E
Sbjct: 317 RVQLVVVIDEFGTTEGLLTAEDITEEIVGEILDGGE--DLPIDSVDEDTVRVRGEVNIEE 374
Query: 382 VEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVK 441
V EAL+I+ + E T+ G++F+ R+ EG+ V V+ RI + + +
Sbjct: 375 VNEALNIDLPEGEEFETIAGFIFNRAGRLVEEGEAFRFEDIELTVEHVENTRIMKARVQR 434
Query: 442 QD 443
D
Sbjct: 435 LD 436
>ref|NP_103889.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB49675.1| (AP003000) hypothetical protein [Mesorhizobium loti]
Length = 436
Score = 184 bits (468), Expect = 1e-45
Identities = 119/433 (27%), Positives = 217/433 (49%), Gaps = 5/433 (1%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+ + +L+ +N +SE A+V R RL+ ++ G + A AL + +LS+ Q+G
Sbjct: 6 IAIVVVLICVNGLLAMSELAIVSSRPARLKAMIDRGVNGAGRALDLGSNPGKFLSSVQIG 65
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
ITL + G + L+ + +RE+ + +V+A IT+ +++GE+VP
Sbjct: 66 ITLVGVLSGAFSGATLGDRLSVFLATTGMRESVADPLGVGIVVAI--ITYFSLIVGELVP 123
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
K +A+ E+ AA + + + P+V L D+ L +G + + ++EE+
Sbjct: 124 KQIALRDPERVAARAAPAMTILATISAPLVFLLDISGRAILWLLGQRGESEEKV-TDEEI 182
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLK 257
K++V E+ G I+S E +I D + + +MTPR ++ ++ ++ +++
Sbjct: 183 KMLVAEAEHHGTIESDERRMIAGVMRLGDRAVRAVMTPRTEVDWINLQSDDTTIRKLLMD 242
Query: 258 GHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIK 317
+R P G D ++G+V RD+L+ +I + D + VR IV + A +L K
Sbjct: 243 TQHSRLPAGDGGVDVMVGVVQTRDVLA-AILAGRTLDPRKHVRAAPIVYDQADALDVLHK 301
Query: 318 MKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL-KQEGINKLEEGVFELEGM 376
+K+ + ALV DEYG G++T DI+E I G + D +E K E+G + L G
Sbjct: 302 LKESDVPMALVHDEYGHFEGIVTPADILEAITGVFRADLDAGDEENAVKREDGSWLLAGY 361
Query: 377 LDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKR 436
+ + + E L + + + T+ GYV S + +P G+ + + G+ FEV+ +DG RI +
Sbjct: 362 MQADEMAEILGFDLPENRDYETVAGYVLSHMHHLPATGECVDAQGWRFEVVDLDGRRIDK 421
Query: 437 LKAVKQDQGENEA 449
L A + EA
Sbjct: 422 LIATRLPGTHREA 434
>ref|NP_356888.1| (NC_003063) AGR_L_2203p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK89673.1| (AE008310) AGR_L_2203p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 425
Score = 184 bits (467), Expect = 2e-45
Identities = 118/421 (28%), Positives = 223/421 (52%), Gaps = 7/421 (1%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+M+ LL +LN +SE A+V R RL+ L G+ A +AL +S+ +LS Q+G
Sbjct: 5 IMIVVLLTVLNGVLAMSELAVVSSRPARLKVLAAQGSRGATMALGLSENPGRFLSTVQIG 64
Query: 78 ITLSSLALG-WVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
ITL + G + G A+ L E I SVV+A IT+L +++GE+V
Sbjct: 65 ITLVGVLSGAFSGATLGARFTGWLLEQGVPDRAADAIGVGSVVVA---ITYLSLIVGELV 121
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEE 196
PK +A+ EK A + + + P+V L D L +G + E + + +++E
Sbjct: 122 PKQIALRDPEKIAARVAPTMVMLSRIGAPLVWLLDKSGKVVLAILG-HSGESNASVTDDE 180
Query: 197 LKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVL 256
++ ++ E+ G+I++ E +I + +D +A+ +MTPR+D+ +D E+S EE + +
Sbjct: 181 IRTVLAEAHSAGVIETEESAMITSVMRLADRNARGLMTPRRDVEVVDIEDSAEEIREQLR 240
Query: 257 KGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILI 316
+ +R P G+ D I+G++ +D ++ + K D +++R++ +V + S ++
Sbjct: 241 QTQRSRLPVRNGASDEILGVLFAKDAFD-ALASGKELDVRELLREVPVVSDLTSAVDVIQ 299
Query: 317 KMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGM 376
+++ +H LV DEYG G+++ D++E I G ++ D ++ + + E+G F + G
Sbjct: 300 SLRRSTVHMVLVYDEYGHFEGIVSSGDVLEAITGAFQEDND-EEPAMVEREDGSFLVAGW 358
Query: 377 LDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKR 436
+ + + + D++ E T+ G V R+P G+ I +G+ FEV+ +DG RI +
Sbjct: 359 MPADEFAYRMGFQIDEDAEFETVAGLVLDEFRRLPELGEHITRNGWRFEVIDLDGHRIDK 418
Query: 437 L 437
+
Sbjct: 419 V 419
>ref|NP_216358.1| (NC_000962) hypothetical protein Rv1842c [Mycobacterium
tuberculosis H37Rv]
sp|Q50592|YI42_MYCTU Hypothetical protein Rv1842c
pir||B70664 hypothetical protein Rv1842c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB06112.1| (Z83859) hypothetical protein Rv1842c [Mycobacterium tuberculosis
H37Rv]
Length = 455
Score = 184 bits (467), Expect = 2e-45
Identities = 114/443 (25%), Positives = 222/443 (49%), Gaps = 17/443 (3%)
Query: 12 SESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYL 71
++++ ++ L FV +EF+L + ++ +E + G S + + RL L
Sbjct: 4 TDTVATILAILALTAGTGVFVAAEFSLTALDRSTVEANARGGTSRDRFIQRAHHRLSFQL 63
Query: 72 SATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVV 131
S QLGI++++LA G++ EP +A+L ++ + + + A + +T L +V
Sbjct: 64 SGAQLGISITTLATGYLTEPLVAELPHPGLVAVGMSDR--VADGLITFFALVIVTSLSMV 121
Query: 132 LGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH-DG 190
GE+VPK LA+A+ + +F ++ P +RL + A++ ++++GI P E
Sbjct: 122 FGELVPKYLAVARPLRTARSVVAGQVLFSLLLTPAIRLTNGAANWIVRRLGIEPAEELRS 181
Query: 191 THSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEE 250
+ +EL +V S R G +D +++ + F +A+E+MTPR +V L +++ +
Sbjct: 182 ARTPQELVSLVRSSARSGALDDATAWLMRRSLQFGALTAEELMTPRSKIVALQTDDTIAD 241
Query: 251 NIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESAS 310
+ F+R+P +G D +G+VH++ + + + +VP +
Sbjct: 242 LVAAAAASGFSRFPVVEGDLDATVGIVHVKQVFEVPPGDRAHTLLTTVAEPVAVVPSTLD 301
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGV 370
++ +++ + TA+V+DEYGGTAG++T+ED+IEEI+G++ DE+D + G
Sbjct: 302 GDAVMAQVRASALQTAMVVDEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVVAAGNG- 360
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIV------------ 418
+ + G+L ++ V A + T+GG V L +P+ G+T+
Sbjct: 361 WRVSGLLRIDEVASATGYR-APDGPYETIGGLVLRELGHIPVAGETVELTALDQDGLPDD 419
Query: 419 SHGYSFEVLSVDGARIKRLKAVK 441
S + V+ +DG RI L+ +K
Sbjct: 420 SMRWLATVIQMDGRRIDLLELIK 442
>ref|NP_534226.1| (NC_003305) hemolysin [Agrobacterium tumefaciens str. C58 (U.
Washington)]
gb|AAL44542.1| (AE009304) hemolysin [Agrobacterium tumefaciens str. C58 (U.
Washington)]
Length = 420
Score = 183 bits (465), Expect = 3e-45
Identities = 118/420 (28%), Positives = 222/420 (52%), Gaps = 7/420 (1%)
Query: 19 MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGI 78
M+ LL +LN +SE A+V R RL+ L G+ A +AL +S+ +LS Q+GI
Sbjct: 1 MIVVLLTVLNGVLAMSELAVVSSRPARLKVLAAQGSRGATMALGLSENPGRFLSTVQIGI 60
Query: 79 TLSSLALG-WVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
TL + G + G A+ L E I SVV+A IT+L +++GE+VP
Sbjct: 61 TLVGVLSGAFSGATLGARFTGWLLEQGVPDRAADAIGVGSVVVA---ITYLSLIVGELVP 117
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
K +A+ EK A + + + P+V L D L +G + E + + +++E+
Sbjct: 118 KQIALRDPEKIAARVAPTMVMLSRIGAPLVWLLDKSGKVVLAILG-HSGESNASVTDDEI 176
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLK 257
+ ++ E+ G+I++ E +I + +D +A+ +MTPR+D+ +D E+S EE + + +
Sbjct: 177 RTVLAEAHSAGVIETEESAMITSVMRLADRNARGLMTPRRDVEVVDIEDSAEEIREQLRQ 236
Query: 258 GHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIK 317
+R P G+ D I+G++ +D ++ + K D +++R++ +V + S ++
Sbjct: 237 TQRSRLPVRNGASDEILGVLFAKDAFD-ALASGKELDVRELLREVPVVSDLTSAVDVIQS 295
Query: 318 MKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGML 377
+++ +H LV DEYG G+++ D++E I G ++ D ++ + + E+G F + G +
Sbjct: 296 LRRSTVHMVLVYDEYGHFEGIVSSGDVLEAITGAFQEDND-EEPAMVEREDGSFLVAGWM 354
Query: 378 DLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRL 437
+ + + D++ E T+ G V R+P G+ I +G+ FEV+ +DG RI ++
Sbjct: 355 PADEFAYRMGFQIDEDAEFETVAGLVLDEFRRLPELGEHITRNGWRFEVIDLDGHRIDKV 414
>ref|NP_604380.1| (NC_003454) Integral membrane protein with CBS domains
[Fusobacterium nucleatum subsp. nucleatum ATCC 25586]
gb|AAL95679.1| (AE010654) magnesium and cobalt efflux protein CorC [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 426
Score = 182 bits (463), Expect = 5e-45
Identities = 118/426 (27%), Positives = 214/426 (49%), Gaps = 14/426 (3%)
Query: 13 ESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLS 72
++ L +++ +L+LL+ FF +E AL R LE+L + + +K + +
Sbjct: 2 DTYLNVLILVILILLSGFFSAAETALSAYRSNYLEKLDEEKHPKKYAVMKKWLKEP---N 58
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
A GI + + + + ++ F + SV +A +T L ++
Sbjct: 59 AMLTGIVICNNIVNILASSIATVVIVNYFGNK----------GSSVALATAIMTILILIF 108
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTH 192
GEI PK +A S K + ++V ++ P V I+ + +G++
Sbjct: 109 GEITPKLMARNNSAKIAEKVSVVIYVLSIILTPAVSCLIFISRLVGRILGVDMTSPQLMI 168
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
+EE++ V EGII+ E E+I + +TSAKE+MTPR M+ + + E
Sbjct: 169 TEEDIISFVNVGNAEGIIEEDEKEMIHSIVTLGETSAKEVMTPRTSMLAFEATKTINEVW 228
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASIS 312
D ++ F+R P + + DNI+G+++++DL+ Q +R VPE+ SI
Sbjct: 229 DEIIDNGFSRIPIYEETIDNIVGILYVKDLMEHIKNNELNLPIKQFIRSAYFVPETKSII 288
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG-INKLEEGVF 371
+IL + + ++H A+V+DEYGG GL+T+ED+IEEI+GEI DEYD ++E K+ + +
Sbjct: 289 EILKEFRGLKVHIAIVLDEYGGVVGLVTIEDLIEEIVGEIRDEYDDEEESFFKKIADNEY 348
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
E++ M D+E++ + L +E + +LGG + + ++ GD + +VL VD
Sbjct: 349 EVDAMTDIETINKDLELELPISEDYESLGGLIVTTTGKICEVGDEVQIDNIYLKVLEVDK 408
Query: 432 ARIKRL 437
R+ ++
Sbjct: 409 MRVSKV 414
>gb|AAC05772.1| (AF051356) putative hemolysin [Streptococcus mutans]
Length = 445
Score = 181 bits (458), Expect = 2e-44
Identities = 120/442 (27%), Positives = 224/442 (50%), Gaps = 18/442 (4%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
IL ++ +L L NAFF +E ALV + + R+E+ + G LK+ + + +LS
Sbjct: 10 ILQFLLLLILTLCNAFFSATEMALVSLNRARVEQKAEEGEKKYIRLLKVLENPNNFLSTI 69
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
Q+GITL +L G ++ + +A F N + +I+ +T++ +VLGE
Sbjct: 70 QVGITLITLLSGASLADSLGREIAVWFG------NSATARTAGSLISLAFLTYISIVLGE 123
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSE 194
+ PK +A+ E + +A + V P V L V + + + + D +
Sbjct: 124 LYPKRIAMNLKENLAVLSAPVIIFLGKVVSPFVWLLSVSTNLLSRLTPMTFDDADEKMTR 183
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
+E++ ++ S E +D+ E E+++ + A+E+M PR D +D + + I
Sbjct: 184 DEIEYMLTNS--EETLDADEIEMLQGVFSLDELMAREVMVPRTDAFMVDINDDSSDIIQT 241
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMH-DFNQIVRKMIIVPESASISQ 313
+L F+R P KD IIG++H ++LL+ H + +I+++ + VPE+ ++
Sbjct: 242 ILNERFSRIPVYDDDKDKIIGIIHTKNLLNAGFKEGFDHINLRRILQEPLFVPETIVVND 301
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFEL 373
+L +K Q A+++DEYGG AGL+T+ED++EEI+GEI DE D + ++ + + +
Sbjct: 302 LLTALKNTQNQMAILLDEYGGVAGLVTLEDLLEEIVGEIDDETDKTAISVREIADNTYIV 361
Query: 374 EGMLDLESVEEALHIEFDKECEQV-TLGGYVFSLLERMPMEGD----TIVSHGYSFEVLS 428
G + L E + E D E + V T+ G+ + + +P + + + S+G E+++
Sbjct: 362 LGTMTLNDFNE--YFETDLESDNVDTIAGFYLTGVGTIPSQEEKEHFEVESNGKHLELIN 419
Query: 429 --VDGARIKRLKAVKQDQGENE 448
V R+ +LK + + E E
Sbjct: 420 DKVKDGRVTKLKILVSEVEEKE 441
>gb|AAG02152.1|AF212041_8 (AF212041) TlyC; hemolysin [Zymomonas mobilis]
Length = 429
Score = 179 bits (454), Expect = 6e-44
Identities = 121/436 (27%), Positives = 221/436 (49%), Gaps = 15/436 (3%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
I++L++A L+ N F +SE A++ R+ +LE + K A AL +S +LS
Sbjct: 2 IVLLLIA--LIAFNGLFAMSELAIISSRRPKLEAMAKT-RKGASAALALSAHPGRFLSTM 58
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
Q+GIT S G V + + +MD+ + ++++V+ T+ ++ GE
Sbjct: 59 QVGITGISTLAGAVSGETLGGPIGERLAAMDVPNAMAWGFTVAIVVT----TYFSLIAGE 114
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWV--VFYPVVRLFDVIAHFFLKKMGINPKEHDGTH 192
+VPK +A+ E+ F A P V W+ + P V L D + G+ + H+
Sbjct: 115 LVPKQIALKAPEQIAAFTAIP--VLWLSRLTAPAVWLLDKSSALVFHLAGMTREAHNQV- 171
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
+ EE+++ + E+ + G+I+ E +II +D +EIMTPR ++ LD E
Sbjct: 172 TAEEVRLTITEAFQAGVIEENERQIISGVIRLADRPVREIMTPRTEVGWLDMEADIPTLS 231
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASIS 312
+ +R P GS DNIIG+VH RD++ R + + D +++R IVP+ ++
Sbjct: 232 KNLASMPHSRMPVAIGSVDNIIGVVHSRDIV-RVLMRGEKLDIKRLMRPAPIVPDQTTVM 290
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGE-ISDEYDLKQEGINKLEEGVF 371
L ++ ++ LV +EYG G++ +++ + G +SD + I + ++G +
Sbjct: 291 AALDSLRLAEVPLGLVHNEYGHFEGVVAPANLLPAMSGHFVSDVEGRNEPSIIEDKQGHY 350
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
L G L + + + L E D++ + T+ G+ S+L +P G+ S+G+ FE+L + G
Sbjct: 351 ILSGSLSADQMADKLGFELDEDRDYATVAGFALSVLRHLPKIGEYFTSNGWLFEILDITG 410
Query: 432 ARIKRLKAVKQDQGEN 447
+I+++ K D GEN
Sbjct: 411 HKIEKVGVSKAD-GEN 425
>ref|NP_336347.1| (NC_002755) CBS domain protein [Mycobacterium tuberculosis CDC1551]
gb|AAK46161.1| (AE007047) CBS domain protein [Mycobacterium tuberculosis CDC1551]
Length = 455
Score = 178 bits (451), Expect = 1e-43
Identities = 111/443 (25%), Positives = 219/443 (49%), Gaps = 17/443 (3%)
Query: 12 SESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYL 71
++++ ++ L FV +EF+L + ++ +E + G S + + RL L
Sbjct: 4 TDTVATILAILALTAGTGVFVAAEFSLTALDRSTVEANARGGTSRDRFIQRAHHRLSFQL 63
Query: 72 SATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVV 131
S QLGI++++LA G++ EP +A+L ++ + + + A + +T L +V
Sbjct: 64 SGAQLGISITTLATGYLTEPLVAELPHPGLVAVGMSDR--VADGLITFFALVIVTSLSMV 121
Query: 132 LGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH-DG 190
GE+VPK LA+A+ + +F ++ P +RL + A++ ++++GI P E
Sbjct: 122 FGELVPKYLAVARPLRTARSVVAGQVLFSLLLTPAIRLTNGAANWIVRRLGIEPAEELRS 181
Query: 191 THSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEE 250
+ + L +V S R G +D +++ + F +A+E+M PR +V L +++ +
Sbjct: 182 ARTPQXLVSLVRSSARSGALDDATAWLMRRSLQFGALTAEELMXPRSKIVALQTDDTIAD 241
Query: 251 NIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESAS 310
+ F+R+P +G D +G+VH++ + + + +VP +
Sbjct: 242 LVAAAAASGFSRFPVVEGDLDATVGIVHVKQVFEVPPGDRAHTLLTTVAEPVAVVPSTLD 301
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGV 370
++ +++ + TA+V+DEYGGTAG++T+ED+IEEI+G++ DE+D + G
Sbjct: 302 GDAVMAQVRASALQTAMVVDEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVVAAXNG- 360
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIV------------ 418
+ + G+L ++ V A + T+ G V L +P+ G+T+
Sbjct: 361 WRVSGLLRIDEVASATGYR-APDGPYETISGLVLRELGHIPVAGETVELTALDQDGLPDD 419
Query: 419 SHGYSFEVLSVDGARIKRLKAVK 441
S + V+ +DG RI L+ +K
Sbjct: 420 SMRWLATVIQMDGRRIDLLELIK 442
>ref|NP_386781.1| (NC_003047) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium
meliloti]
emb|CAC47254.1| (AL591791) HYPOTHETICAL TRANSMEMBRANE PROTEIN [Sinorhizobium
meliloti]
Length = 434
Score = 176 bits (446), Expect = 5e-43
Identities = 125/441 (28%), Positives = 215/441 (48%), Gaps = 24/441 (5%)
Query: 12 SESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYL 71
+E L L+ L++++AFF SE AL ++R+ L G A + ++ +R D +
Sbjct: 10 TEYWLSLLSVICLLVISAFFSGSETALTAASRSRMHTLENNGEERAGMVTRLIERRDRLI 69
Query: 72 SATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVV 131
+G L ++ + LL LF V IA +++T L V+
Sbjct: 70 GTLLIGNNLVNI----LASSLTTSLLIGLFGDS------------GVAIATVAMTVLLVI 113
Query: 132 LGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGIN-PKEHDG 190
E++PKS AIA ++ L A + F V P+ L + I L GIN +
Sbjct: 114 FSEVLPKSWAIASPDRFALAVAPWVRPFVAVVGPISSLVNAIVRRILHLFGINLSSDLPM 173
Query: 191 THSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEE 250
+ EEL+ V REG + + + + D + ++M R M ++ ++ +
Sbjct: 174 LTAHEELRGAVNLLHREGSVIKADRDRLGGVLDLGELEVSDVMIHRTGMRAINADDPPQT 233
Query: 251 NIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMH----DFNQIVRKMIIVP 306
+ +L+ FTR P +GS DNIIG+VH +DLL R++ P + D +I +K VP
Sbjct: 234 CVREILESPFTRLPLWRGSADNIIGVVHSKDLL-RALAEPNVEPETLDIVKIAQKPWFVP 292
Query: 307 ESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL 366
+S ++ L + ++H A+V+DEYG GL+T+EDI+EEI+G+I+DE+D+ +G+ +
Sbjct: 293 DSTNLKDQLNAFLRRKLHLAIVVDEYGQVQGLVTLEDILEEIVGDIADEHDIDIQGVRQE 352
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEV 426
+G ++G + + + AL E E T+ G V + +P E +G F V
Sbjct: 353 ADGSIVVDGSVPIRDLNRALDWSLPDE-EATTVAGLVIHESKSIPEERQAFTFYGKRFTV 411
Query: 427 LSVDGARIKRLK-AVKQDQGE 446
+ RI +L+ +D+G+
Sbjct: 412 MKRVKNRITKLRIRAAEDEGQ 432
>ref|NP_246616.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK03761.1| (AE006204) unknown [Pasteurella multocida]
Length = 449
Score = 176 bits (446), Expect = 5e-43
Identities = 114/436 (26%), Positives = 225/436 (51%), Gaps = 13/436 (2%)
Query: 5 QGAYLDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMS 64
Q ++ E+IL L + L++++A +E +L RK +L+ LV G++ A+L L++
Sbjct: 12 QRYFMSLFEAILSLGI---LIIISAVISAAEMSLAGARKIKLQSLVNDGDARAQLVLELQ 68
Query: 65 QRLDTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLS 124
+ +++ Q+G+ + ++ G +GE AI LA + E ++ S + +AF
Sbjct: 69 SQPGRFITVVQIGLNMVAILGGIIGESAIRPYLALVLTQHVSVE---WLDSAASWLAFAL 125
Query: 125 ITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGIN 184
+T L V+L ++VPK LA+ EK L R + V + P+V +FD IA+ F K I+
Sbjct: 126 VTTLFVLLADLVPKRLAMINPEKVALRTVRIMSVCIFLLKPLVMIFDSIANGFFKLFRIS 185
Query: 185 PKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDE 244
+ + E++ IVG G++++ E +I+N + + MT R+++V LD
Sbjct: 186 TIREENM-TPEDIVAIVGAGAEAGVVNAQEHYLIENIFEMQQRTVTSTMTTRENIVFLDR 244
Query: 245 ENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDF--NQIVRKM 302
+ +D + ++ C D I+G V LL+ + K ++++RK
Sbjct: 245 SFDRQAVLDTLTHNSHSKLLICDNGLDRILGYVESHTLLTMYLQVEKGVSLTDSRLLRKA 304
Query: 303 IIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG 362
+ +P++ S+ ++L K A++++EY G++T+ D++ +MGE+ ++E
Sbjct: 305 LFIPDTLSLFEVLELFKSTGEDFAVIVNEYALVVGIITLNDVMSIVMGELVSN---EEEQ 361
Query: 363 INKLEEGVFELEGMLDLESVEEALHI-EFDKECEQVTLGGYVFSLLERMPMEGDTIVSHG 421
I + +E + ++G LE V AL++ F E T+GG++ +L ++P + D ++
Sbjct: 362 IVRRDEDSWLIDGATPLEDVMRALNLSHFPGEENYETIGGFMMYMLRKIPKKTDFVLYDK 421
Query: 422 YSFEVLSVDGARIKRL 437
Y FE++ + +I +L
Sbjct: 422 YKFEIIDTENVKIDQL 437
>ref|NP_268699.1| (NC_002737) putative hemolysin [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
gb|AAK33420.1| (AE006501) putative hemolysin [Streptococcus pyogenes M1 GAS]
Length = 444
Score = 174 bits (442), Expect = 1e-42
Identities = 109/404 (26%), Positives = 210/404 (51%), Gaps = 18/404 (4%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
++ ++ +L LLNAFF SE ALV + ++R+E+ G+ L++ + + +LS
Sbjct: 10 VIQFLLLVVLTLLNAFFSASEMALVSLNRSRVEQKAADGDKKYARLLRVLEEPNHFLSTI 69
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
Q+GIT SL G ++ K+++ N + +I+ + +T++ +VLGE
Sbjct: 70 QVGITFISLLSGASLSASLGKVISGWLG------NSATARTAGTIISLVFLTYVSIVLGE 123
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSE 194
+ PK +A+ +K + +A + + P V L + + + + D +
Sbjct: 124 LYPKRIAMNLKDKLAIVSAPIIIGLGRLVSPFVWLLSASTNLLSRLTPMTFDDADEQMTR 183
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
+E++ ++ +S E +D+ E E+++ + A+E+M PR D +D + ENI
Sbjct: 184 DEIEYMLSKS--EATLDAEEIEMLQGVFSLDEMMAREVMVPRTDAFMIDINDDPLENIQE 241
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI-VRKMI----IVPESA 309
+LK F+R P KD IIG++H + LL F+QI +RKM+ VPE+
Sbjct: 242 ILKQSFSRIPVYDVDKDKIIGLIHTKRLLESGF----RQGFDQINMRKMLQEPLFVPETI 297
Query: 310 SISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEG 369
+ +L +++ Q A+++DEYGG AGL+T+ED++EEI+GEI DE D ++ ++++ +
Sbjct: 298 FVDDLLRQLRNTQNQMAILLDEYGGVAGLVTLEDLLEEIVGEIDDETDKAEQFVHEIGDN 357
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME 413
+ + G + L + E + + + T+ G+ + + +P +
Sbjct: 358 TYIVVGTMTLNEFNDYFDTELESD-DVDTIAGFYLTGIGTIPSQ 400
>ref|NP_606671.1| (NC_003485) putative hemolysin [Streptococcus pyogenes MGAS8232]
gb|AAL97170.1| (AE009984) putative hemolysin [Streptococcus pyogenes MGAS8232]
Length = 444
Score = 174 bits (442), Expect = 1e-42
Identities = 109/404 (26%), Positives = 210/404 (51%), Gaps = 18/404 (4%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
++ ++ +L LLNAFF SE ALV + ++R+E+ G+ L++ + + +LS
Sbjct: 10 VIQFLLLVVLTLLNAFFSASEMALVSLNRSRVEQKAADGDKKYARLLRVLEEPNHFLSTI 69
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
Q+GIT SL G ++ K+++ N + +I+ + +T++ +VLGE
Sbjct: 70 QVGITFISLLSGASLSASLGKVISGWLG------NSATARTAGTIISLVFLTYVSIVLGE 123
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSE 194
+ PK +A+ +K + +A + + P V L + + + + D +
Sbjct: 124 LYPKRIAMNLKDKLAIVSAPIIIGLGRLVSPFVWLLSASTNLLSRLTPMTFDDADEQMTR 183
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
+E++ ++ +S E +D+ E E+++ + A+E+M PR D +D + ENI
Sbjct: 184 DEIEYMLSKS--EATLDAEEIEMLQGVFSLDEMMAREVMVPRTDAFMIDINDDPLENIQE 241
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI-VRKMI----IVPESA 309
+LK F+R P KD IIG++H + LL F+QI +RKM+ VPE+
Sbjct: 242 ILKQSFSRIPVYDVDKDKIIGLIHTKRLLESGF----RQGFDQINMRKMLQEPLFVPETI 297
Query: 310 SISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEG 369
+ +L +++ Q A+++DEYGG AGL+T+ED++EEI+GEI DE D ++ ++++ +
Sbjct: 298 FVDDLLRQLRNTQNQMAILLDEYGGVAGLVTLEDLLEEIVGEIDDETDKAEQFVHEIGDN 357
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME 413
+ + G + L + E + + + T+ G+ + + +P +
Sbjct: 358 TYIVVGTMTLNEFNDYFDTELESD-DVDTIAGFYLTGIGTIPSQ 400
>ref|NP_346390.1| (NC_003028) CBS domain protein [Streptococcus pneumoniae TIGR4]
gb|AAK76030.1| (AE007486) CBS domain protein [Streptococcus pneumoniae TIGR4]
Length = 443
Score = 172 bits (435), Expect = 9e-42
Identities = 116/442 (26%), Positives = 227/442 (51%), Gaps = 24/442 (5%)
Query: 10 DPSESILML--MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRL 67
DPS L+L ++ F+L +LNAFF +E A+V + + R+E+ + G+ LK+ +
Sbjct: 3 DPSSQNLLLQFVLLFILTVLNAFFSATEMAMVSLNRARVEQKAEEGDRRYIRLLKVLENP 62
Query: 68 DTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITF 127
+ +LS Q+GITL ++ G + +++A+ + + + +++ ++ +T+
Sbjct: 63 NHFLSTIQVGITLITILSGASLTDTLGRVIASWLGNGETAQ------AVATFLSLAFLTY 116
Query: 128 LHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKE 187
+ +V GE+ PK +A+ + + A + + P V L +F ++ +
Sbjct: 117 ISIVFGELYPKRIALNLKDALAIRTAPIIIGIGKLVSPFVWLLAASTNFLSHLTPMSFDD 176
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
D + +E+ ++ S E +D+ E E+++ + A+E+M PR D +D ++
Sbjct: 177 ADEKMTRDEIAYMLTNS--EETLDADEIEMLQGVFSLDELMAREVMVPRTDAFMVDIQDD 234
Query: 248 YEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMII--- 304
+ I +LK +++R P G KDN+IG++H + LL + F+ IV K I+
Sbjct: 235 SQAIIQSILKQNYSRIPVYDGDKDNVIGIIHTKSLLKAGF----VDGFDNIVWKRILQDP 290
Query: 305 --VPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG 362
VPE+ + +L +++ Q A+++DEYGG AGL+T+ED++EEI+GEI DE D
Sbjct: 291 LFVPETIFVDDLLKELRNTQRQMAILLDEYGGMAGLVTLEDLLEEIVGEIDDETDKAAID 350
Query: 363 INKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME---GDTIVS 419
++++ E + ++G + L +E + + + T+ GY + + +P +VS
Sbjct: 351 VHQIGEDTYIVQGTMTLNDFNNYFDVELESD-DVDTIAGYYLTGVGTIPTTEKLSYELVS 409
Query: 420 HGYSFEVLSVDGARIKRLKAVK 441
F +L+ D + R+ VK
Sbjct: 410 QNKQF-ILTNDKVKNGRVTKVK 430
>ref|NP_359370.1| (NC_003098) Hemolysin [Streptococcus pneumoniae R6]
gb|AAL00581.1| (AE008542) Hemolysin [Streptococcus pneumoniae R6]
Length = 443
Score = 171 bits (434), Expect = 1e-41
Identities = 116/442 (26%), Positives = 227/442 (51%), Gaps = 24/442 (5%)
Query: 10 DPSESILML--MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRL 67
DPS L+L ++ F+L +LNAFF +E A+V + + R+E+ + G+ LK+ +
Sbjct: 3 DPSSQNLLLQFVLLFILTVLNAFFSATEMAMVSLNRARVEQKAEEGDRRYIRLLKVLENP 62
Query: 68 DTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITF 127
+ +LS Q+GITL ++ G + +++A+ + + + +++ ++ +T+
Sbjct: 63 NHFLSTIQVGITLITILSGASLTNTLGRVIASWLGNGETAQ------AVATFLSLAFLTY 116
Query: 128 LHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKE 187
+ +V GE+ PK +A+ + + A + + P V L +F ++ +
Sbjct: 117 ISIVFGELYPKRIALNLKDALAIRTAPIIIGIGKLVSPFVWLLAASTNFLSHLTPMSFDD 176
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
D + +E+ ++ S E +D+ E E+++ + A+E+M PR D +D ++
Sbjct: 177 ADEKMTRDEIAYMLTNS--EETLDADEIEMLQGVFSLDELMAREVMVPRTDAFMVDIQDD 234
Query: 248 YEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMII--- 304
+ I +LK +++R P G KDN+IG++H + LL + F+ IV K I+
Sbjct: 235 SQAIIQSILKQNYSRIPVYDGDKDNVIGIIHTKSLLKAGF----VDGFDNIVWKRILQDP 290
Query: 305 --VPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG 362
VPE+ + +L +++ Q A+++DEYGG AGL+T+ED++EEI+GEI DE D
Sbjct: 291 LFVPETIFVDDLLKELRNTQRQMAILLDEYGGMAGLVTLEDLLEEIVGEIDDETDKAAID 350
Query: 363 INKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME---GDTIVS 419
++++ E + ++G + L +E + + + T+ GY + + +P +VS
Sbjct: 351 VHQIGEDTYIVQGTMTLNDFNNYFDVELESD-DVDTIAGYYLTGVGTIPTTEKLSYELVS 409
Query: 420 HGYSFEVLSVDGARIKRLKAVK 441
F +L+ D + R+ VK
Sbjct: 410 QNKQF-ILTNDKVKNGRVTKVK 430
>ref|NP_458844.1| (NC_003198) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
ref|NP_463268.1| (NC_003197) putative hemolysin-related protein [Salmonella
typhimurium LT2]
gb|AAL23227.1| (AE008906) putative hemolysin-related protein [Salmonella
typhimurium LT2]
emb|CAD06887.1| (AL627283) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 447
Score = 170 bits (431), Expect = 3e-41
Identities = 110/432 (25%), Positives = 214/432 (49%), Gaps = 8/432 (1%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+ + F L+ ++AFF +SE +L RK +L+ L G+ NA+ LKM + + + Q+G
Sbjct: 5 IFIIFCLIAVSAFFSISEISLAASRKIKLKLLADEGSINAQRVLKMQENPGMFFTVVQIG 64
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
+ ++ G VG+ A + +ALF +P +S +++F +T L ++ ++ P
Sbjct: 65 LNAVAILGGIVGDAAFSPAFSALFSHY---MSPELSEQLSFILSFSLVTGLFILFADLTP 121
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
K + + E L P+ VF P+V LF+ +A+ + I D S++
Sbjct: 122 KRIGMIAPEAVALRIINPMRFCLFVFRPLVWLFNGMANNIFRLFKIPMVRKDDITSDDIY 181
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLK 257
++ +L G++ E E+I+N + + MT R+ ++ D + V +
Sbjct: 182 AVVEAGAL-AGVLRKQEHELIENVFELESRTVPSSMTSRESIIWFDLHEDEQSLKKKVAE 240
Query: 258 GHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI-VRKMIIVPESASISQILI 316
+++ C D+IIG V +DLL+R + M + + +R +IVP++ ++S+ L
Sbjct: 241 HPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSMALNSGVQIRNTLIVPDTLTLSEALE 300
Query: 317 KMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGM 376
K A++++EY G++T+ D++ +MG++ + +E I +E + ++G
Sbjct: 301 SFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQG--LEEQIVARDENSWLVDGG 358
Query: 377 LDLESVEEALHI-EFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIK 435
++ V L I EF + T+GG++ +L ++P D++ GY FEV+ +D RI
Sbjct: 359 TPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFSGYKFEVVDIDNYRID 418
Query: 436 RLKAVKQDQGEN 447
+L + D N
Sbjct: 419 QLLVTRLDNKSN 430
>ref|NP_600420.1| (NC_003450) COG1253:Hemolysins and related proteins containing CBS
domains [Corynebacterium glutamicum]
dbj|BAB98587.1| (AP005277) Uncharacterized CBS domain-containing proteins
[Corynebacterium glutamicum ATCC 13032]
Length = 467
Score = 168 bits (426), Expect = 1e-40
Identities = 118/408 (28%), Positives = 205/408 (49%), Gaps = 16/408 (3%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
L+V ++++LN +FV EFA + V + L L G+ A+ AL +++R LS QLG
Sbjct: 12 LVVIGVIIVLNGYFVAQEFAYMSVDRNELRALADSGDKKARRALSITKRTSFMLSGAQLG 71
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIH-SMSVVIAFLSITFLHVVLGEIV 136
IT++ L +G+V EP + L L + + P + S+ V+A T + ++ GE+
Sbjct: 72 ITVTGLLVGFVAEPLVGNALGVLLGGVGV---PAAVSISVGTVLALAISTVVQMIFGELF 128
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH-DGTHSEE 195
PK+ +A K+ L A + + ++ FD ++ L+ I P E D + + +
Sbjct: 129 PKNYTLATPLKSALALAPSTTWYLKLAGWLITFFDFASNALLRLFRIEPVEDVDSSATAQ 188
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIV 255
+L IV S G++++ + DF M PR + +D E + E ++
Sbjct: 189 DLPHIVASSRDSGVLNNSMSLSLDRLLDFPSHDVGHAMIPRSRVGVVDPETTIAEVKALM 248
Query: 256 LKGHFTRYPYCKGSKDN--IIGMVHIRDLLSRSIFTPKMHDFNQIVRKM---IIVPESAS 310
K H TRYP DN IG++++ D+L I ++ D ++ M +IVPE S
Sbjct: 249 RKAH-TRYPII---DDNHVPIGVINLIDILGTDIHGAEISDSAKVTEFMHQPVIVPEFMS 304
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL-KQEGINKLEEG 369
+ ++ ++ + A VIDEYGG G++T+ED+ EE++G+I+DE+D+ E I +
Sbjct: 305 LPDVVTELHNREDRLACVIDEYGGFIGIVTLEDLAEEVLGDINDEHDVFSSEDITETSPD 364
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTI 417
+ ++G L+ VE A+ E E + T+ G +F + GD I
Sbjct: 365 KWLIDGDTPLDEVERAIGYEL-PEGDYETISGLLFDHANALLKTGDVI 411
>ref|NP_406985.1| (NC_003143) putative membrane protein [Yersinia pestis]
emb|CAC92755.1| (AJ414157) putative membrane protein [Yersinia pestis]
Length = 443
Score = 167 bits (423), Expect = 2e-40
Identities = 103/422 (24%), Positives = 212/422 (49%), Gaps = 8/422 (1%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+++ L+ ++AFF LSE +L RK +L+ L G++NA LK+ + + + Q+G
Sbjct: 5 ILLILFLIAVSAFFSLSEISLAASRKIKLKLLADEGDTNALRVLKLQETPGMFFTVVQIG 64
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
+ ++ G VG+ A + +FE P S V +F+ +T L ++ ++ P
Sbjct: 65 LNAVAILGGIVGDAAFSPSFKLVFERF---MAPELADQASFVCSFVLVTSLFILFADLTP 121
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
K + + E + P+ ++F P+V F+ +A+ + + +D S++
Sbjct: 122 KRIGMISPEAVAVRIVNPMRFCLMIFRPLVWFFNGMANLIFRLFKLPMVRNDDITSDDIY 181
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLK 257
++ +L G++ E E+I+N + + MT R++++ D S + D +
Sbjct: 182 AVVEAGAL-AGVLRKQEHELIENVFELESRTVPSSMTSRENVIYFDLRESEDSIKDKIST 240
Query: 258 GHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI-VRKMIIVPESASISQILI 316
+++ C G D ++G V +DLL+R + + + + +R +IVP++ ++S+ L
Sbjct: 241 HPHSKFLVCDGHIDQVVGYVDSKDLLNRVLGNQSLVLSSGVQIRSALIVPDTLTLSEALE 300
Query: 317 KMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGM 376
K A++++EY G++T+ D++ +MG++ + ++E I +E + +EG
Sbjct: 301 SFKTAGEDFAVILNEYALVVGIITLNDVMTTLMGDLVGQG--QEEQIVARDENSWLIEGG 358
Query: 377 LDLESVEEALHI-EFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIK 435
+E V LHI +F + T+GG++ +L ++P D + GY FEV+ +D +I
Sbjct: 359 TPIEDVMRVLHIDDFPQSGNYETIGGFMMYMLRKIPKRTDFVKYAGYKFEVVDIDSYKID 418
Query: 436 RL 437
+L
Sbjct: 419 QL 420
>ref|NP_625717.1| (NC_003888) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
emb|CAB61656.1| (AL133213) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 347
Score = 167 bits (422), Expect = 3e-40
Identities = 107/342 (31%), Positives = 181/342 (52%), Gaps = 9/342 (2%)
Query: 14 SILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSA 73
S+L L+ A LLVL N FFV +EFALV VR++++E L G + A+ L +RL ++A
Sbjct: 2 SVLQLLFAALLVLANGFFVGAEFALVSVRRSQIEPL---GTTRARQVLYGLERLPQMMAA 58
Query: 74 TQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLG 133
Q GIT+ SL LG V EP +A LL +FE + L IH + VIA + F H+V+G
Sbjct: 59 AQFGITVCSLTLGAVAEPTVAHLLEPVFEWIHLPHG--MIHPLGYVIALAVVVFCHLVIG 116
Query: 134 EIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTH 192
E+VPK+LA+A EKA L+ + L F + P+ A L+ + PK E +
Sbjct: 117 EMVPKNLAMAAPEKAALWLSPGLVAFARLCRPITVALGACAQGILRLFHVEPKDEVEAVF 176
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
+ E+L +V ++ + G++D E E +++A + +++ PR+ +V + + E +
Sbjct: 177 TSEQLNRLVEDAGQAGLLDPEEQERLEDALELGSHPVTDVLLPRESLVTVSPSVTPGEIV 236
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASIS 312
+ + ++R+P + +G +H++D+L + + R M + +
Sbjct: 237 ALTARTGYSRFPIA-ADQGAFMGYLHVKDVLDLEESDRAVP--QHLWRPMTTLRPELPLD 293
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISD 354
L M++ H A V D G GL+ +ED++E ++GE+ D
Sbjct: 294 DALTVMRRAATHLAQVTDPSGRILGLVALEDVLELLVGEVRD 335
>ref|NP_214453.1| (NC_000918) hemolysin homolog protein [Aquifex aeolicus]
pir||H70481 hemolysin homolog protein - Aquifex aeolicus
gb|AAC07855.1| (AE000774) hemolysin homolog protein [Aquifex aeolicus]
Length = 422
Score = 166 bits (420), Expect = 5e-40
Identities = 108/427 (25%), Positives = 211/427 (49%), Gaps = 29/427 (6%)
Query: 19 MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGI 78
+V L+ + FF SE V K L + GN KL +K+ + L + +G
Sbjct: 13 LVFLFLLFASGFFSSSEVVFFSVSKPVLMKFS--GNRFFKLLMKLLSKPKELLISILIGN 70
Query: 79 TLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPK 138
L ++ + G +L ++A + L + GE +PK
Sbjct: 71 ELVNVLIASYGTKTFVELFG----------------DKGALLAVAVSSTLIFIFGETIPK 114
Query: 139 SLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELK 198
++ + +++ L A ++F VV P+ + + LKKMG+ KE +EE+L
Sbjct: 115 NVVLPIADRLALVYAPVFYLFHVVITPLRIILILPVQTLLKKMGVEIKEETFELTEEKLL 174
Query: 199 IIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKG 258
++ + + G + E +I+ + + +E+MTPR + L E+ E ++ + +
Sbjct: 175 SLIEQGIESGEFEIQEKSMIEKVLEMDEVLVREVMTPRPKIFALPEDKRVGEVVEEIKRR 234
Query: 259 HFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRK----MIIVPESASISQI 314
++ P K DN+ G+VH+++LL P H+ + +++ ++I+PE ++S
Sbjct: 235 AHSKIPLYKDVLDNVSGIVHVKELL------PIQHNRERALKEFATDVLIIPEVTTLSNF 288
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELE 374
L ++KK +I A+VIDE+G +G++T+ D+++ I+GEI +EY+ ++E I K+ + +
Sbjct: 289 LREIKKYKIKLAVVIDEHGAVSGVVTLYDVLKWIVGEIPEEYEEEKE-IEKISADTYRVG 347
Query: 375 GMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARI 434
G + +E + E + +E +E + T+ G+V + L R+P +GD G+ F V V ++
Sbjct: 348 GSVSIEELAEKIGLELPEEYDYDTVSGFVMANLGRIPKKGDEFTFDGFKFIVNEVQNNKV 407
Query: 435 KRLKAVK 441
K + V+
Sbjct: 408 KEVIVVR 414
>ref|NP_421811.1| (NC_002696) CBS domain protein [Caulobacter crescentus CB15]
gb|AAK24979.1| (AE005965) CBS domain protein [Caulobacter crescentus CB15]
Length = 400
Score = 166 bits (419), Expect = 7e-40
Identities = 112/411 (27%), Positives = 196/411 (47%), Gaps = 20/411 (4%)
Query: 43 KTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSLALGWVGEPAIAKLLAALFE 102
+ R+ +L + G+ AK K+ +T + A LG L ++ + + L+ +
Sbjct: 6 RARMHQLEREGDRPAKRVNKLLSDQETMIGAVLLGNNLINILASALATQVLTTLIPGPW- 64
Query: 103 SMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVV 162
V +A ++T L ++ E++PK+LAI +S+ + P +
Sbjct: 65 --------------GVAVATAAMTVLILIFAEVLPKTLAIVRSDDVARALSAPTLFIVRL 110
Query: 163 FYPVVRLFDVIAHFFLKKMGIN-PKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNA 221
F P++ I L+ G+ D + EE++ V EG++++ + ++
Sbjct: 111 FGPIIYAIQWIVRRTLRVFGVKLDMAVDVLAAHEEIRGAVDYHHSEGLVETDDRRMLGGV 170
Query: 222 XDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRD 281
D SD EIM RK MV LD E +D VL+ TR P + DNI+G++H RD
Sbjct: 171 LDLSDMDVSEIMVHRKSMVLLDAGLPARELVDAVLEAQHTRIPLYRDQPDNIVGVLHARD 230
Query: 282 LLSRSIFTP---KMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGL 338
LL P + D I+R+ +P++ ++ L K + H ALV+DEYG GL
Sbjct: 231 LLKALAECPTGVEGLDIAAILREPWFIPDATNLKDQLNAFLKRKNHFALVVDEYGALQGL 290
Query: 339 LTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVT 398
+T+EDI+EEI+GEI DE+D +G+ + +G ++G + + + A+ E E VT
Sbjct: 291 VTLEDILEEIVGEIEDEHDTTLDGVRRQGDGSVNVDGHVTVRDLNRAMDWRL-PEGEAVT 349
Query: 399 LGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVKQDQGENEA 449
+ G V + +P G T + + + F+VL +I L+ + +++A
Sbjct: 350 IAGLVIHEAQMIPEPGQTFIFYRHRFQVLRRQRNQITALRISARLDDDSDA 400
>ref|NP_625540.1| (NC_003888) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
emb|CAC01476.1| (AL391014) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 337
Score = 162 bits (410), Expect = 8e-39
Identities = 104/338 (30%), Positives = 187/338 (54%), Gaps = 8/338 (2%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
+ L++ +++NAFFV +EFAL+ VR++++E + G++ AK L + + L+A Q
Sbjct: 4 VQLLIGLATLVVNAFFVGAEFALISVRRSQVEPYAEEGDTRAKRVLWGLEHVSALLAAAQ 63
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEI 135
LGITL +L LG V EPAIA LL +F ++ + H++S V+A T+LH++LGE+
Sbjct: 64 LGITLCTLVLGIVAEPAIAHLLEPVFHAVGVPSGA--GHAVSFVLALALATYLHMLLGEM 121
Query: 136 VPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSE 194
VPK++A+A+ ++ L PL PV+ + +A+ LK + + K E T ++
Sbjct: 122 VPKNIALAEPVRSALVLGPPLVALSRALRPVIFTVNALANGLLKLLRVEAKNEVAATFTD 181
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
EL IV ++ G+ID E +++A + ++++ P + +V + E+ +
Sbjct: 182 AELAEIVKDAGEAGLIDDRARERLRDALELGRRPVRDVVLPLERVVHARVGITPEQLERL 241
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFN-QIVRKMIIVPESASISQ 313
+ F+R+P + I+G +H++D L S P+ F + +R + V E +
Sbjct: 242 SAQSGFSRFPVVDDGR-RIVGYLHVKDALDAS---PRDLPFRLRDMRPIARVRERTPLDD 297
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGE 351
+L M++ + H A V+ G AGL+TMED++ E+ G+
Sbjct: 298 VLTAMRRSRTHLAAVLGSDGRLAGLVTMEDVLRELFGQ 335
>ref|NP_290850.1| (NC_002655) putative transport protein [Escherichia coli O157:H7
EDL933]
ref|NP_313223.1| (NC_002695) putative transport protein [Escherichia coli O157:H7]
ref|NP_418639.1| (NC_000913) putative transport protein [Escherichia coli K12]
sp|P39319|YTFL_ECOLI Hypothetical protein ytfL
pir||S56443 hypothetical 49.8K protein (cysq-msra intergenic region) -
Escherichia coli
gb|AAA97114.1| (U14003) ORF_f447 [Escherichia coli]
gb|AAC77175.1| (AE000493) putative transport protein [Escherichia coli K12]
gb|AAG59416.1|AE005654_5 (AE005654) putative transport protein [Escherichia coli O157:H7
EDL933]
dbj|BAB38619.1| (AP002568) putative transport protein [Escherichia coli O157:H7]
Length = 447
Score = 162 bits (409), Expect = 1e-38
Identities = 106/431 (24%), Positives = 214/431 (49%), Gaps = 14/431 (3%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
++V L+ ++AFF +SE +L RK +L+ L GN NA+ L M + + + Q+G
Sbjct: 5 ILVILCLIAVSAFFSMSEISLAASRKIKLKLLADEGNINAQRVLNMQENPGMFFTVVQIG 64
Query: 78 ITLSSLALGWVGEPAIAKLLAALFE---SMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
+ ++ G VG+ A + +LF S +L E +S +++F +T + ++ +
Sbjct: 65 LNAVAILGGIVGDAAFSPAFHSLFSRYMSAELSE------QLSFILSFSLVTGMFILFAD 118
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSE 194
+ PK + + E L P+ V P+V F+ +A+ + + D S+
Sbjct: 119 LTPKRIGMIAPEAVALRIINPMRFCLYVCTPLVWFFNGLANIIFRIFKLPMVRKDDITSD 178
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
+ ++ +L G++ E E+I+N + + MTPR++++ D + +
Sbjct: 179 DIYAVVEAGAL-AGVLRKQEHELIENVFELESRTVPSSMTPRENVIWFDLHEDEQSLKNK 237
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI-VRKMIIVPESASISQ 313
V + +++ C D+IIG V +DLL+R + + + + +R +IVP++ ++S+
Sbjct: 238 VAEHPHSKFLVCNEDIDHIIGYVDSKDLLNRVLANQSLALNSGVQIRNTLIVPDTLTLSE 297
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFEL 373
L K A++++EY G++T+ D++ +MG++ + +E I +E + +
Sbjct: 298 ALESFKTAGEDFAVIMNEYALVVGIITLNDVMTTLMGDLVGQG--LEEQIVARDENSWLI 355
Query: 374 EGMLDLESVEEALHI-EFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGA 432
+G ++ V L I EF + T+GG++ +L ++P D++ GY FEV+ +D
Sbjct: 356 DGGTPIDDVMRVLDIDEFPQSGNYETIGGFMMFMLRKIPKRTDSVKFAGYKFEVVDIDNY 415
Query: 433 RIKRLKAVKQD 443
RI +L + D
Sbjct: 416 RIDQLLVTRID 426
>ref|NP_336346.1| (NC_002755) CBS domain protein [Mycobacterium tuberculosis CDC1551]
gb|AAK46160.1| (AE007047) CBS domain protein [Mycobacterium tuberculosis CDC1551]
Length = 345
Score = 161 bits (407), Expect = 2e-38
Identities = 107/344 (31%), Positives = 186/344 (53%), Gaps = 16/344 (4%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+++A LL+ NAFFV +EFAL+ R+ RLE L + G + A ++ ++L L+ QLG
Sbjct: 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
+T+SS+ LG VGEPA+ KLL F + P +H++S+ I + LHV+LGE+VP
Sbjct: 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGV--PPALLHTLSLAI----VVALHVLLGEMVP 120
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEEE 196
K++A+A E+ + P V+ + P + +++ A+ L+ +G+ PK E D S E
Sbjct: 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAVYNNCANAILRLVGVQPKDELDIAVSTAE 180
Query: 197 LKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTP----RKDMVCLDEENSYEENI 252
L ++ ESL EG++D E + A ++ P R V +
Sbjct: 181 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV 240
Query: 253 DIVL-KGHFTRYPYC-KGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESAS 310
+ L + ++R+P +G + IG +HI+D+L+ + D +VR + VP+S
Sbjct: 241 EQALAQTGYSRFPVVDRGGR--FIGYLHIKDVLTLGDNPQTVIDL-AVVRPLPRVPQSLP 297
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISD 354
++ L +M++ H ALV + G G++ +ED++E+++G + D
Sbjct: 298 LADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRD 341
>emb|CAC35699.1| (AJ301559) hypothetical protein [Rhodococcus fascians]
Length = 380
Score = 160 bits (406), Expect = 2e-38
Identities = 104/347 (29%), Positives = 189/347 (53%), Gaps = 16/347 (4%)
Query: 20 VAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGIT 79
+A LL+ NAFFV +EFAL+ R+ RLE L+ G A+ ++ Q L L+A QLGIT
Sbjct: 9 LAVLLLAGNAFFVGAEFALISARRDRLEALLAQGKKRAQSVIEAGQNLSQMLAAAQLGIT 68
Query: 80 LSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKS 139
+ S+ LG V EPA+A L+ E + + + F+H ++ IA + LH+++GE+VPK+
Sbjct: 69 ICSILLGRVAEPAVAHLIEVPLELVGIPGS--FLHPIAFAIALTLVVVLHILVGEMVPKN 126
Query: 140 LAIAKSEKATLFAARPLHVFWVV-FYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEEEL 197
+AIA E +T P+H+ ++ ++ +++ A+ L+ + I PK E + S EL
Sbjct: 127 IAIAGPE-STAMVLVPIHLMFIQGGVALISFYNLCANLTLRMLRIEPKDELSSSVSAVEL 185
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLD---EENSYEENID- 253
++GES EG+ID+ E ++ A + S + E++ P + ++ +++ +
Sbjct: 186 SQMIGESRSEGLIDAEEHRRLRQALETSGRTVAEVLIPSHQVRSIELSGPDHTLGPTLGS 245
Query: 254 ---IVLKGHFTRYPYCKGSKDNIIGMVHIRDLL---SRSIFTPKMHDFNQIVRKMIIVPE 307
V++ F+RYP + + +++G +H++D+L + P+ VR + +V
Sbjct: 246 VERAVIETGFSRYP-VRDASGSLVGYLHLKDVLDDMADDSAGPETVIPRSDVRALPVVSI 304
Query: 308 SASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISD 354
+ L K+++ H V D G T G++ +ED++EE +G + D
Sbjct: 305 DTVLDDALTKLRRASSHLGAVHDATGATVGIVALEDLVEEFVGTVRD 351
>ref|NP_216357.1| (NC_000962) hypothetical protein Rv1841c [Mycobacterium
tuberculosis H37Rv]
sp|Q50593|YI41_MYCTU Hypothetical protein Rv1841c
pir||A70664 hypothetical protein Rv1841c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB06113.1| (Z83859) hypothetical protein Rv1841c [Mycobacterium tuberculosis
H37Rv]
Length = 345
Score = 160 bits (406), Expect = 2e-38
Identities = 107/344 (31%), Positives = 185/344 (53%), Gaps = 16/344 (4%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+++A LL+ NAFFV +EFAL+ R+ RLE L + G + A ++ ++L L+ QLG
Sbjct: 7 VLLALLLIGANAFFVGAEFALISARRDRLEALAEQGKATAVTVIRAGEQLPAMLTGAQLG 66
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
+T+SS+ LG VGEPA+ KLL F + P +H++S+ I + LHV+LGE+VP
Sbjct: 67 VTVSSILLGRVGEPAVVKLLQLSFGLSGV--PPALLHTLSLAI----VVALHVLLGEMVP 120
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEEE 196
K++A+A E+ + P V+ + P + ++ A+ L+ +G+ PK E D S E
Sbjct: 121 KNIALAGPERTAMLLVPPYLVYVRLARPFIAFYNNCANAILRLVGVQPKDELDIAVSTAE 180
Query: 197 LKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTP----RKDMVCLDEENSYEENI 252
L ++ ESL EG++D E + A ++ P R V +
Sbjct: 181 LSEMIAESLSEGLLDHEEHTRLTRALRIRTRLVADVAVPLVNIRAVQVSAVGSGPTIGGV 240
Query: 253 DIVL-KGHFTRYPYC-KGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESAS 310
+ L + ++R+P +G + IG +HI+D+L+ + D +VR + VP+S
Sbjct: 241 EQALAQTGYSRFPVVDRGGR--FIGYLHIKDVLTLGDNPQTVIDL-AVVRPLPRVPQSLP 297
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISD 354
++ L +M++ H ALV + G G++ +ED++E+++G + D
Sbjct: 298 LADALSRMRRINSHLALVTADNGSVVGMVALEDVVEDLVGTMRD 341
>ref|NP_627954.1| (NC_003888) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
emb|CAC10302.1| (AL442629) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 341
Score = 160 bits (405), Expect = 3e-38
Identities = 98/339 (28%), Positives = 177/339 (51%), Gaps = 8/339 (2%)
Query: 14 SILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSA 73
+++ L V L +L NAFFV +EFA++ VR++++E K G+ A++ L Q + ++
Sbjct: 2 TVVQLFVGALTLLTNAFFVGAEFAMISVRRSQIEPRAKTGDKRARMTLWGLQHISQMMAT 61
Query: 74 TQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLG 133
QLGIT+SSL LG V EPAIA L+ +FE++ + +H ++ IA T+LH+++G
Sbjct: 62 AQLGITVSSLVLGAVAEPAIAHLMEPVFEAVHMPH--ALVHPVAFAIALTLATYLHMLIG 119
Query: 134 EIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTH 192
E++PK++A+A L PL PVV + A+ LK + + PK E +
Sbjct: 120 EMIPKNIALAAPATTALLLGPPLVALTRALKPVVFGINAFANTLLKLLRVEPKDEVEAVF 179
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
++++L +V ++ G++ +GE +++A + EI+ P + M + + +
Sbjct: 180 TDDQLARMVVDASEAGLLTPADGERLRDALELGTRPVGEILVPAQKMRTVPHTVTPAQLE 239
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDF-NQIVRKMIIVPESASI 311
+ ++R+P G ++G +HI+D L T + F + ++ V +
Sbjct: 240 RMAADAGYSRFP-VTGPGGTVLGYLHIKDTLG---LTDRESPFPRTALHRVTRVRIDTPL 295
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMG 350
L ++ E H A V E G G +TMED++ E++G
Sbjct: 296 DDTLTALRTEDSHLAAVTGETGSVLGFVTMEDVLTELVG 334
>ref|NP_538962.1| (NC_003317) CBS domain containing protein [Brucella melitensis]
gb|AAL51226.1| (AE009448) CBS domain containing protein [Brucella melitensis]
Length = 435
Score = 160 bits (404), Expect = 4e-38
Identities = 115/424 (27%), Positives = 205/424 (48%), Gaps = 23/424 (5%)
Query: 25 VLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSLA 84
V+L+AFF SE AL + R+ L + G++ A + ++ + D + +G L+++
Sbjct: 16 VILSAFFSGSETALTAASRARMLTLEQHGDARASVVQRLIGKRDRLIGVLLIGNNLANI- 74
Query: 85 LGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIAK 144
L +++ +M L F V A L++T + V+ E++PKS AI+
Sbjct: 75 -----------LASSIATTMFLT----FFGDAGVAYATLAMTVILVIFAEVLPKSWAISS 119
Query: 145 SEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHS-EEELKIIVGE 203
++ +L AR + + +V P+ + I L+ GIN S +EEL+ V
Sbjct: 120 PDRFSLNVARGVSLVVLVLGPLSAAVNWIVRVILRLFGINLAVGRSMLSPQEELRGAVEV 179
Query: 204 SLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRY 263
R+ + + + + D + ++M R M ++ + ++ + +L TR
Sbjct: 180 LHRDKSLIKEDRDQLGGLLDLKELEVSDVMVHRTAMGTINADTPADQIVGEILASPHTRV 239
Query: 264 PYCKGSKDNIIGMVHIRDLLSRSIFTPKMH----DFNQIVRKMIIVPESASISQILIKMK 319
P + DNIIG++H +DLL R+++ D ++ RK VP++ ++ L
Sbjct: 240 PVWRDDIDNIIGIIHTKDLL-RALYEVDNDFTRIDIMKVARKPWFVPDTTTLQDQLDAFL 298
Query: 320 KEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDL 379
+ + H A+V+DEYG GL+T+EDI+EEI+G+ISDE+D+ +G+ +G ++G L +
Sbjct: 299 RRKAHIAIVVDEYGDVQGLVTLEDILEEIVGDISDEHDIDMQGLRLQPDGSAIVDGSLPI 358
Query: 380 ESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKA 439
+ AL E E T+ G V + +P HG F VL + R+ RL+
Sbjct: 359 RDINRALDWNLPDE-EATTIAGLVIHETQTIPEVKQAFTFHGKRFTVLKKEKNRLTRLRI 417
Query: 440 VKQD 443
V D
Sbjct: 418 VPLD 421
>ref|NP_600665.1| (NC_003450) COG1253:Hemolysins and related proteins containing CBS
domains [Corynebacterium glutamicum]
dbj|BAB98841.1| (AP005278) Uncharacterized CBS domain-containing proteins
[Corynebacterium glutamicum ATCC 13032]
Length = 354
Score = 159 bits (401), Expect = 8e-38
Identities = 116/345 (33%), Positives = 180/345 (51%), Gaps = 15/345 (4%)
Query: 20 VAFLLVLL--NAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
V ++VLL NAFFV +EFAL+ R+ RL+ LV G A+ L ++ L L+ Q G
Sbjct: 7 VLLIIVLLSANAFFVAAEFALISSRRDRLDSLVSQGKKGAEKVLYATEHLSIMLAGAQFG 66
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
IT+ SL LG V EPAIA + F S + + IH +S VIA IT+LH++ GE+VP
Sbjct: 67 ITVCSLILGKVAEPAIAHFIEVPFTSWGVPND--LIHPISFVIALAIITWLHILFGEMVP 124
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEEE 196
K++AIA E ++ A L F + P++ + IA L+ G+ K E D T E+
Sbjct: 125 KNIAIAGPETLGMWLAPVLIAFVKITRPLIEFMNWIARLTLRAFGVEQKNELDSTVDPEQ 184
Query: 197 LKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS---YEENID 253
L ++ ES EG++D+ E + A S KE++ +D+ L S + +
Sbjct: 185 LASMISESRSEGLLDAEEHARLSKALRSEQRSIKELVIKDEDVRTLAFGKSGPTLHQLEE 244
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI----VRKMIIVPESA 309
V + F+R+P G + +G +HI+D+L R + P+M I +R + V
Sbjct: 245 AVRETGFSRFP-VTGRDGSYLGYIHIKDILPR-LADPEMDPSETIPRSALRPLSNVDADG 302
Query: 310 SISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISD 354
+ +L M H A V + G G++T+ED+IEE +G ++D
Sbjct: 303 LMDDVLDFMHYRSAHMAQVRLK-GELLGVITLEDLIEEYVGTVND 346
>ref|NP_438613.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P44717|YTFL_HAEIN Hypothetical protein HI0452
pir||H64152 hypothetical protein HI0452 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC22110.1| (U32728) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 432
Score = 158 bits (400), Expect = 1e-37
Identities = 107/426 (25%), Positives = 208/426 (48%), Gaps = 17/426 (3%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
++ L+L +A +E +L RK +L+ L G+ LK+ + +++ Q+
Sbjct: 9 ILAIVALILSSAVVSSAEISLASPRKLKLQSLANKGDVRPLQVLKLQEHPGRFITVVQIL 68
Query: 78 ITLSSLALGWVGE----PAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLG 133
+ + ++ G +GE P IA +L FE +I + IAF+ +T L ++
Sbjct: 69 LNMVAILGGGIGESALSPYIADILNRSFEGS-------WIAPTASTIAFILVTCLFILFA 121
Query: 134 EIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHS 193
+++PK +AI E L ++ VF P+V FD IA+ F + I+ DG S
Sbjct: 122 DLIPKRIAITYPEMVALSVVGIMNFSMYVFKPLVWFFDTIANVFFRLFRISTVREDGMTS 181
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
E++ +V G++ + E +I+N D + MT R+++V LD S +E +D
Sbjct: 182 -EDIFAVVEAGAEAGVLKTQEHYLIENIFDMQARTVTSTMTTRENIVYLDRTFSRQEVMD 240
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFN-QIVRKMIIVPESASIS 312
+ + ++ C D I+G + LL+ + + + +++RK + VP++ S+
Sbjct: 241 TLSRDSHSKIVICDNGLDKILGYIESHTLLTMYLQNENVVLTDPKLLRKALFVPDTLSLY 300
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFE 372
++L K A++++EY G++T+ D++ +MGE+ ++E I +E +
Sbjct: 301 EVLELFKSTGEDFAIIVNEYALVVGIVTLNDVMSIVMGELVSN---EEEYIVSRDENSWL 357
Query: 373 LEGMLDLESVEEALHIE-FDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
++G LE V L I F E T+ G++ +L ++P + D++V Y FEV+ +
Sbjct: 358 IDGATPLEEVTRVLDIAYFPDEENYETISGFMMYMLRKIPKKTDSVVYGKYKFEVIDTEN 417
Query: 432 ARIKRL 437
+I ++
Sbjct: 418 FKIDQI 423
>ref|NP_175989.1| (NM_104471) unknown protein [Arabidopsis thaliana]
Length = 846
Score = 157 bits (398), Expect = 2e-37
Identities = 105/411 (25%), Positives = 211/411 (50%), Gaps = 33/411 (8%)
Query: 19 MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGI 78
++ +L+ L+AFF ++E ++ + ++ EL + N + S + +L+ +G
Sbjct: 351 LILAVLLGLSAFFSMAETSITTLWPWKVRELAEKEPENGVFRMLRSD-VTRFLTTILIGT 409
Query: 79 TLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPK 138
T+ ++A + K A+F +S +++ L +L EI PK
Sbjct: 410 TVVNIA----ATALVTKAATAIFGEA----------GVSAATGVMTVAIL--LLTEITPK 453
Query: 139 SLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELK 198
S+A+ +++ RP+ ++ YPV R+ ++ LK +G+ + +E+ELK
Sbjct: 454 SVAVHNAQEVARIVVRPVAWLSLILYPVGRVVTYLSMGILKILGLKGRSEPYV-TEDELK 512
Query: 199 IIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKG 258
+++ + G I+ E ++I+N + DT +E+MTP D+V +D S + + +
Sbjct: 513 LMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDGSGSLVDFHNFWVTH 572
Query: 259 HFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPK--MHDFNQIV----RKMIIVPESASIS 312
++R P + DNI+G+ + DLL + PK + + +V + VP+S S+
Sbjct: 573 QYSRVPVFEQRIDNIVGIAYAMDLLD---YVPKGKLLESTTVVDMAHKPAFFVPDSMSVW 629
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL------ 366
+L + + ++H A+V++EYGGT G++T+ED++EEI+GEI DE D K+E K
Sbjct: 630 NLLREFRIRKVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMR 689
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTI 417
EG+++++ ++ + E L+I+ + + T+ G+V +P G+++
Sbjct: 690 AEGIYDVDANTSIDQLSEELNIKMAEGHQYETVSGFVCEAFGYIPKTGESV 740
>gb|AAF79321.1|AC002304_14 (AC002304) F14J16.20 [Arabidopsis thaliana]
Length = 930
Score = 157 bits (398), Expect = 2e-37
Identities = 105/411 (25%), Positives = 211/411 (50%), Gaps = 33/411 (8%)
Query: 19 MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGI 78
++ +L+ L+AFF ++E ++ + ++ EL + N + S + +L+ +G
Sbjct: 435 LILAVLLGLSAFFSMAETSITTLWPWKVRELAEKEPENGVFRMLRSD-VTRFLTTILIGT 493
Query: 79 TLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPK 138
T+ ++A + K A+F +S +++ L +L EI PK
Sbjct: 494 TVVNIA----ATALVTKAATAIFGEA----------GVSAATGVMTVAIL--LLTEITPK 537
Query: 139 SLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELK 198
S+A+ +++ RP+ ++ YPV R+ ++ LK +G+ + +E+ELK
Sbjct: 538 SVAVHNAQEVARIVVRPVAWLSLILYPVGRVVTYLSMGILKILGLKGRSEPYV-TEDELK 596
Query: 199 IIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKG 258
+++ + G I+ E ++I+N + DT +E+MTP D+V +D S + + +
Sbjct: 597 LMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDGSGSLVDFHNFWVTH 656
Query: 259 HFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPK--MHDFNQIV----RKMIIVPESASIS 312
++R P + DNI+G+ + DLL + PK + + +V + VP+S S+
Sbjct: 657 QYSRVPVFEQRIDNIVGIAYAMDLLD---YVPKGKLLESTTVVDMAHKPAFFVPDSMSVW 713
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL------ 366
+L + + ++H A+V++EYGGT G++T+ED++EEI+GEI DE D K+E K
Sbjct: 714 NLLREFRIRKVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMR 773
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTI 417
EG+++++ ++ + E L+I+ + + T+ G+V +P G+++
Sbjct: 774 AEGIYDVDANTSIDQLSEELNIKMAEGHQYETVSGFVCEAFGYIPKTGESV 824
>ref|NP_221062.1| (NC_000963) unknown [Rickettsia prowazekii]
pir||B71630 hypothetical protein RP702 - Rickettsia prowazekii
emb|CAA15138.1| (AJ235273) unknown [Rickettsia prowazekii]
Length = 424
Score = 157 bits (397), Expect = 2e-37
Identities = 107/428 (25%), Positives = 208/428 (48%), Gaps = 26/428 (6%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
++++V +++ L+A F +E A+ ++ +L GN AK L++ ++ + +
Sbjct: 4 ILVIVIIIMISLSALFAATETAITASSPGKIHKLKIAGNKRAKTVLEVLKKKEKVIGTLL 63
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEI 135
+G +L + + LL + ++A + F+ +V E+
Sbjct: 64 IGNSLINTICTTIATTLFISLLG----------------NNGTIVASGVMAFIIIVFAEV 107
Query: 136 VPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFF--LKKMGINPKEHDGTHS 193
VPK++A+AK E+ TL + + +F +F P+ D I F + ++ +NP + GT
Sbjct: 108 VPKAIAVAKPEQLTLKMSSTIVIFLKLFKPINIALDYITKIFCFIFRINLNP-QISGT-- 164
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EE++ ++ +EG + E ++ D + + EIMT R +++ L+ + YE I
Sbjct: 165 -EEVRGVIEHYHQEGGVYKSERNMLGGILDIRNMTVSEIMTHRSNIIALNIDLPYELIIK 223
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLS---RSIFTPKMHDFNQIVRKMIIVPESAS 310
+L G TR P + ++DNIIG+++++DLL + K D N ++ +P++A
Sbjct: 224 TLLSGAHTRIPLWQDNRDNIIGILNLKDLLKALYENNNDDKKVDINTLLTPPWFIPDNAL 283
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGV 370
+ L ++ H A V+DEYG G++T+ED+IEEI+G I+DE+D I +
Sbjct: 284 VVDQLHAFRERNNHFACVVDEYGTLLGIITLEDVIEEIVGPITDEHDRLNNEIIQESNTE 343
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVD 430
F ++G + + L E + T+ G + + R+P +G+ I + +L
Sbjct: 344 FIIKGTTTIRDINRELDWNLSDE-DANTIAGLIIHKIARIPNQGEVIKIFNFKIIILKKI 402
Query: 431 GARIKRLK 438
+I +K
Sbjct: 403 ANKIDSVK 410
>ref|NP_360716.1| (NC_003103) hemolysin homolog [Rickettsia conorii]
gb|AAL03617.1| (AE008659) hemolysin homolog [Rickettsia conorii]
Length = 424
Score = 156 bits (394), Expect = 5e-37
Identities = 106/407 (26%), Positives = 202/407 (49%), Gaps = 26/407 (6%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
++++V +++ L+A F +E A+ ++ +L GN AK L++ ++ + +
Sbjct: 4 ILVIVIIIMIALSALFAATETAITASSPGKIHKLKIAGNKRAKTILEVLKKKEKVIGTLL 63
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEI 135
+G +L + + LF S F+ ++A + F+ +V E+
Sbjct: 64 IGNSLINTVC--------TTIATTLFIS--------FLGDNGPIVASGVMAFIIIVFAEV 107
Query: 136 VPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFF--LKKMGINPKEHDGTHS 193
VPK++A+AK E+ L A + +F +F P+ D I F + ++ +NP + GT
Sbjct: 108 VPKAIAVAKPEQLALKMASTIVIFLKLFKPINIALDYITKIFCFILRINLNP-QISGT-- 164
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
EE++ ++ +EG + + ++ D + + EIMT R ++ L+ + +E I
Sbjct: 165 -EEVRGVIEHYHQEGGVYKSDRNMLGGILDIRNMTVSEIMTHRSSIIALNIDLPHEVIIK 223
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLS---RSIFTPKMHDFNQIVRKMIIVPESAS 310
+L G TR P + ++DNIIG+++++DLL + K D N+++ +PE+A
Sbjct: 224 TLLSGAHTRIPLWQDNRDNIIGILNLKDLLKALYENNNDAKKVDINKLLTPPWFIPENAL 283
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGV 370
+ L ++ H A V+DEYG G++T+ED+IEEI+G I+DE+D I K
Sbjct: 284 VVDQLHAFRERNNHFACVVDEYGTLLGIITLEDVIEEIVGPITDEHDRLNNEIIKKSNTE 343
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTI 417
F ++G + + L E + T+ G + + R+P +G+ I
Sbjct: 344 FIIKGTTTIRDINRELDWNLSDE-DANTIAGLIIHKIARIPNQGEVI 389
>ref|NP_219086.1| (NC_000919) hemolysin (tlyC) [Treponema pallidum]
pir||H71299 probable hemolysin (tlyC) - syphilis spirochete
gb|AAC65622.1| (AE001239) hemolysin (tlyC) [Treponema pallidum]
Length = 265
Score = 155 bits (393), Expect = 7e-37
Identities = 80/233 (34%), Positives = 143/233 (61%), Gaps = 2/233 (0%)
Query: 216 EIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIG 275
++I+ D SDTS +E+M PR D+ L+ S E ++ V + +R+P + + DN++G
Sbjct: 27 DMIRGIVDLSDTSVREVMIPRIDVDFLELSMSGETLVEKVTESGHSRFPVYEQTIDNVVG 86
Query: 276 MVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGT 335
+++++DL+ + P+ +++RK VPES I +L + K+ +H A+ +DEYGG
Sbjct: 87 VLYVKDLI-KLFGRPQEVRLERLLRKPFFVPESKRIDSLLREFKRRHVHIAIAVDEYGGV 145
Query: 336 AGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECE 395
+G+ MEDIIEEI+G+I DE+D ++E I L +GV+ + +DLE + E LH F + E
Sbjct: 146 SGIACMEDIIEEIVGDIQDEFDHEREDIEPLGQGVWLCDARVDLEDLSECLHTVFPSQ-E 204
Query: 396 QVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVKQDQGENE 448
TLGG+VF+L ++P++ + + + F + ++ +I +K V +G++E
Sbjct: 205 FGTLGGFVFNLFGKIPVKYEKVSWGAFDFIIQDMEAHKINTIKIVSVLRGDSE 257
>ref|NP_187914.1| (NM_112146) hemolysin-like protein [Arabidopsis thaliana]
dbj|BAB01398.1| (AP000375) contains similarity to hemolysin~gene_id:MJG19.2
[Arabidopsis thaliana]
Length = 661
Score = 155 bits (392), Expect = 9e-37
Identities = 101/408 (24%), Positives = 206/408 (49%), Gaps = 27/408 (6%)
Query: 19 MVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGI 78
++ L+ L+AFF ++E ++ + ++ EL + N + S + +L+ +G
Sbjct: 163 LILAALLSLSAFFSMAETSITTLWPWKVRELAEKEPENGVFRMLRSD-VTRFLTTILIGT 221
Query: 79 TLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPK 138
T+ ++A + + A+F +S +++ L +L EI PK
Sbjct: 222 TVVNIA----ATALVTEAATAIFGEA----------GVSAATGLMTVAIL--LLTEITPK 265
Query: 139 SLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELK 198
S+A+ +++ RP+ +V YPV R+ ++ LK +G+ + +E+ELK
Sbjct: 266 SVAVHNAQEVARIVVRPVAWLSLVLYPVGRIVTYLSMGILKILGLKGRSEPYV-TEDELK 324
Query: 199 IIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKG 258
+++ + G I+ E ++I+N + DT +E+MTP D+V +D S + + +
Sbjct: 325 LMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASASLVDFHSMWVTH 384
Query: 259 HFTRYPYCKGSKDNIIGMVHIRDLLS---RSIFTPKMHDFNQIVRKMIIVPESASISQIL 315
++R P + DNI+G+ + DLL + + + VP+S S+ +L
Sbjct: 385 QYSRVPVFEQRIDNIVGIAYAMDLLDYVQKGDLLESTSVGDMAHKPAYFVPDSMSVWNLL 444
Query: 316 IKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL------EEG 369
+ + ++H A+V++EYGGT G++T+ED++EEI+GEI DE D K+E K +EG
Sbjct: 445 REFRIRKVHMAVVLNEYGGTIGIVTLEDVVEEIVGEIFDENDSKEEIQKKTGYIVMRDEG 504
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTI 417
+++++ ++ + E L+++ + + T+ G+V +P G+++
Sbjct: 505 IYDVDANTSIDQLSEELNMKMPEGIQYETVSGFVCEAFGYIPKTGESV 552
>ref|NP_216882.1| (NC_000962) hypothetical protein Rv2366c [Mycobacterium
tuberculosis H37Rv]
sp|O05832|YN66_MYCTU Hypothetical protein Rv2366c
pir||E70586 hypothetical protein Rv2366c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB08473.1| (Z95208) hypothetical protein Rv2366c [Mycobacterium tuberculosis
H37Rv]
Length = 435
Score = 154 bits (388), Expect = 3e-36
Identities = 104/408 (25%), Positives = 208/408 (50%), Gaps = 22/408 (5%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
L+ + +L+ L F + A+ V R++ELV+ A K+ Y++ L
Sbjct: 7 LLGSIVLIGLGGLFAAIDAAISTVSPARVDELVRDQRPGAGSLRKVMADRPRYVNLVVLL 66
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
T + A A L+ + + + V+ +F VV+G + P
Sbjct: 67 RTSCEIT-------ATALLVVFIRYHFSMVWGLYLAAGIMVLASF-------VVVG-VGP 111
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
++L + +L A PL + + P+ RL ++ + G + SE EL
Sbjct: 112 RTLGRQNAYSISLATALPLRLISWLLMPISRLLVLLGNALTPGRGFR---NGPFASEIEL 168
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLK 257
+ +V + + G++ + E +I++ + DT A+E+M PR +M+ ++ + + + + + ++
Sbjct: 169 REVVDLAQQRGVVAADERRMIESVFELGDTPAREVMVPRTEMIWIESDKTAGQAMTLAVR 228
Query: 258 GHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTP---KMHDFNQIVRKMIIVPESASISQI 314
+R P + D+I+G+V+++DL+ ++ + + +++R + VP+S + +
Sbjct: 229 SGHSRIPVIGENVDDIVGVVYLKDLVEQTFCSTNGGRETTVARVMRPAVFVPDSKPLDAL 288
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG-INKLEEGVFEL 373
L +M++++ H AL++DEYG AGL+++ED++EEI+GEI+DEYD + + L + F +
Sbjct: 289 LREMQRDRNHMALLVDEYGAIAGLVSIEDVLEEIVGEIADEYDQAETAPVEDLGDKRFRV 348
Query: 374 EGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHG 421
L +E V E +EFD + + T+GG + L R+P+ G ++SHG
Sbjct: 349 SARLPIEDVGELYGVEFDDDLDVDTVGGLLALELGRVPLPGAEVISHG 396
>ref|NP_233223.1| (NC_002506) hemolysin, putative [Vibrio cholerae]
pir||F82411 probable hemolysin VCA0837 [imported] - Vibrio cholerae (group O1
strain N16961)
gb|AAF96735.1| (AE004411) hemolysin, putative [Vibrio cholerae]
Length = 437
Score = 151 bits (382), Expect = 1e-35
Identities = 101/430 (23%), Positives = 214/430 (49%), Gaps = 24/430 (5%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
+ + L+ + FF +SE +L RK RL ++ G+ A+ L++ R + + Q+G
Sbjct: 7 ISIIMALIAASCFFSMSEISLAAARKIRLRQMADEGDERAERVLELQARPGNFFTVVQIG 66
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
+ ++ G VGE A + AL E + + N + S V++F+ +T + +++ +++P
Sbjct: 67 LNAVAIMGGIVGESAFTPYIRALLEGL-IPAN--LLSQASFVLSFMLVTSMFILIADLMP 123
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
K +A+A E+ + + + P V F+ +A+ + + + P E + + +++
Sbjct: 124 KRIAMAMPERIATSLVGGMLICITLLKPFVWFFNGLANLLFRALSV-PTERNDEITSDDI 182
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLK 257
++ G++D E +++++ + MT R+ +V L+ +S E V+K
Sbjct: 183 YAVMDAGAEAGVLDKGEQQMMESVFEMQSIPVTSAMTARESLVFLNLSDSEE-----VIK 237
Query: 258 GHFTRYPY-----CKGSKDNIIGMVHIRDLLSRSIFTPKMH-DFNQIVRKMIIVPESASI 311
+++P+ C G D I G V + LL R I M+ + +V I+P++ S+
Sbjct: 238 QKISQHPHNKFLVCDGQLDQIKGYVDSKALLIRVINGQGMNLKESNVVIGCPIIPDTLSL 297
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMG----EISDEYDLKQEGINKLE 367
S+ L K ++ A+V++EY G++T D+ +MG +E + ++G + L
Sbjct: 298 SEALEYFKINRVDFAVVMNEYALVVGVVTFNDLQSAVMGTWVLAEGEEQIVARDGNSWLV 357
Query: 368 EGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVL 427
+GV + ++ ++E EF ++ T+ G++ +L ++P D++V GY FEV+
Sbjct: 358 DGVTPITDVMRSFAIE-----EFPQQQNYETIAGFMMYMLRKIPRRTDSVVYAGYKFEVV 412
Query: 428 SVDGARIKRL 437
+D ++ +L
Sbjct: 413 DIDNYKVDQL 422
>ref|NP_336915.1| (NC_002755) CBS domain protein [Mycobacterium tuberculosis CDC1551]
gb|AAK46729.1| (AE007083) CBS domain protein [Mycobacterium tuberculosis CDC1551]
Length = 406
Score = 151 bits (381), Expect = 2e-35
Identities = 84/296 (28%), Positives = 169/296 (56%), Gaps = 8/296 (2%)
Query: 130 VVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHD 189
VV+G + P++L + +L A PL + + P+ RL ++ + G +
Sbjct: 76 VVVG-VGPRTLGRQNAYSISLATALPLRLISWLLMPISRLLVLLGNALTPGRGFR---NG 131
Query: 190 GTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE 249
SE EL+ +V + + G++ + E +I++ + DT A+E+M PR +M+ ++ + +
Sbjct: 132 PFASEIELREVVDLAQQRGVVAADERRMIESVFELGDTPAREVMVPRTEMIWIESDKTAG 191
Query: 250 ENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTP---KMHDFNQIVRKMIIVP 306
+ + + ++ +R P + D+I+G+V+++DL+ ++ + + +++R + VP
Sbjct: 192 QAMTLAVRSGHSRIPVIGENVDDIVGVVYLKDLVEQTFCSTNGGRETTVARVMRPAVFVP 251
Query: 307 ESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG-INK 365
+S + +L +M++++ H AL++DEYG AGL+++ED++EEI+GEI+DEYD + +
Sbjct: 252 DSKPLDALLREMQRDRNHMALLVDEYGAIAGLVSIEDVLEEIVGEIADEYDQAETAPVED 311
Query: 366 LEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHG 421
L + F + L +E V E +EFD + + T+GG + L R+P+ G ++SHG
Sbjct: 312 LGDKRFRVSARLPIEDVGELYGVEFDDDLDVDTVGGLLALELGRVPLPGAEVISHG 367
>ref|NP_212336.1| (NC_001318) hemolysin, putative [Borrelia burgdorferi]
pir||B70125 hemolysin homolog - Lyme disease spirochete
gb|AAC66587.1| (AE001130) hemolysin, putative [Borrelia burgdorferi]
Length = 412
Score = 149 bits (377), Expect = 5e-35
Identities = 107/431 (24%), Positives = 215/431 (49%), Gaps = 26/431 (6%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
+L L++ L ++L+A F SE A + +++++ K G S + + Q ++
Sbjct: 1 MLELIIILLFIILSAIFSASETAYTSLSIIQIQDIRKKGKSGISV-YNLVQSPSKLITTI 59
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
+G +S++ +A L F + ++ I+ IT + ++ E
Sbjct: 60 LIGNNISNI---------VASTLTTKFVLEKYGNS-------ALAISTGLITIIVLIFAE 103
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSE 194
I+PK +AI +E L + L +F P++ + + I L + ++
Sbjct: 104 ILPKQIAILNNEIIALSTSFFLKPLIFIFTPLIYIINKIIKKILNLFKVKTSSQ---MTK 160
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
E +K ++ + GI+ + ++ D A EIMT R + L + ++ I +
Sbjct: 161 ESIKNMLSLAGSLGILKNDSRIFMQKMLDIDQVRASEIMTHRTGVFSLSSSSKLKDVIKL 220
Query: 255 VLKGHFTRYPYCKG-SKDNIIGMVHIRDLLSRSIFTPKMH-DFNQIVRKMIIVPESASIS 312
+ + ++R P KG S++ IIG++ +DL+ + M+ + +Q ++ + V ++ I
Sbjct: 221 IKEEGYSRIPIYKGQSREQIIGILIAKDLIE--VNKKDMNKNVSQFIKPAVFVQQNKRIK 278
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG--INKLEEGV 370
IL M+K+Q A+VIDEYGG +G+LT+EDI+E+I G ISDEYD+K+E I ++ +
Sbjct: 279 DILDIMRKKQKIMAIVIDEYGGFSGILTIEDIVEKIFGAISDEYDIKEEKPLITQINDNT 338
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVD 430
+ + G + +EEA+ I + T+GGY+ LL+++P + +T+ ++ + + +
Sbjct: 339 YSILGETTFDEIEEAIGISIKHKEYTNTIGGYLIDLLDKIPTKNETVKTNDGEYFIKEIQ 398
Query: 431 GARIKRLKAVK 441
+I+ + +K
Sbjct: 399 NNKIETITFIK 409
>ref|NP_520398.1| (NC_003295) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
emb|CAD15984.1| (AL646069) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
Length = 441
Score = 149 bits (376), Expect = 7e-35
Identities = 102/435 (23%), Positives = 209/435 (47%), Gaps = 11/435 (2%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
+ ++V L+L++AFF +E AL R+TRL+ L G+S A L++ + + Q
Sbjct: 1 MYVLVLVTLILVSAFFSAAEIALTASRRTRLQTLADDGDSRAPRILQLKDTPGNFFTVVQ 60
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEI 135
+G+ ++ G +GE I+ LA + + +++ F+ +T L ++ ++
Sbjct: 61 IGVNAVAILAGIIGERQISDTLAGWLADWLPQARADRVANLA---GFVIVTGLFILFADL 117
Query: 136 VPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEE 195
+PK LA+ E+ L P+ V PVV +F+ A LK +G+ P + + E
Sbjct: 118 LPKRLAVLYPERFALAIIGPMQGCLRVLRPVVWVFNGAADLILKLLGV-PTQRVEQITTE 176
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIV 255
++ +VG G++ E +I+N + + +MT R D+V + E +
Sbjct: 177 DIAAMVGAGAEAGVLRKHELAVIENVFELESRTVTSVMTVRDDIVYFTLDEPLESIKRKI 236
Query: 256 LKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI----VRKMIIVPESASI 311
+ Y C+ D+++G + +D+L + + + + ++++P++ ++
Sbjct: 237 VGQPHAEYLVCRDDIDSVLGFIASKDILQQILSEESSAVIRNVGKHYNKNLLVLPDTLNL 296
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVF 371
SQ L + ++ V++EYG G+ T++DI+ +MG+I Y + E I + ++G
Sbjct: 297 SQALARFREMHERFGAVVNEYGLVVGVATLDDIVGAVMGDIL--YLGEDEQIVRRDDGSC 354
Query: 372 ELEGMLDLESVEEALHI-EFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVD 430
++G+ + V+ A + + E T+ G V L+R+P + +++ EVL +D
Sbjct: 355 LVDGITPIADVKRAFDLDDLPGEHYVETIAGLVIYALKRIPKKSESVDIGPLHIEVLDMD 414
Query: 431 GARIKRLKAVKQDQG 445
RI +L ++ G
Sbjct: 415 SHRIDQLLVSRRTDG 429
>ref|NP_286383.1| (NC_002655) putative transport protein [Escherichia coli O157:H7
EDL933]
ref|NP_308723.1| (NC_002695) putative transport protein [Escherichia coli O157:H7]
ref|NP_415191.1| (NC_000913) putative transport protein [Escherichia coli K12]
sp|P77392|CORC_ECOLI Magnesium and cobalt efflux protein corC
pir||H64800 ybeX protein - Escherichia coli
gb|AAB40860.1| (U82598) similar to H. influenzae [Escherichia coli]
gb|AAC73759.1| (AE000170) putative transport protein [Escherichia coli K12]
gb|AAG54991.1|AE005244_9 (AE005244) putative transport protein [Escherichia coli O157:H7
EDL933]
dbj|BAB34119.1| (AP002552) putative transport protein [Escherichia coli O157:H7]
Length = 292
Score = 148 bits (374), Expect = 1e-34
Identities = 76/248 (30%), Positives = 137/248 (54%), Gaps = 2/248 (0%)
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
H + +EL ++ +S + +ID ++++ D +D ++IM PR M+ L +
Sbjct: 28 HGEPKNRDELLALIRDSGQNDLIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQT 87
Query: 248 YEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPE 307
+E +D++++ +R+P KD+I G++ +DLL + ++++R+ ++VPE
Sbjct: 88 LDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRQAVVVPE 147
Query: 308 SASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQE-GINKL 366
S + ++L + + ++ H A+VIDE+GG +GL+T+EDI+E I+GEI DEYD + + +L
Sbjct: 148 SKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQL 207
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEV 426
+ + + +E EA F E E T+GG V +P G+TI GY F+V
Sbjct: 208 SRHTWTVRALASIEDFNEAFGTHFSDE-EVDTIGGLVMQAFGHLPARGETIDIDGYQFKV 266
Query: 427 LSVDGARI 434
D RI
Sbjct: 267 AMADSRRI 274
>ref|NP_656152.1| (NC_003995) DUF21, Domain of unknown function DUF21 [Bacillus
anthracis A2012] [Bacillus anthracis str. A2012]
Length = 186
Score = 147 bits (372), Expect = 2e-34
Identities = 76/183 (41%), Positives = 118/183 (63%), Gaps = 3/183 (1%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSAT 74
I + + +L+ L AFFV +EFA+VKVR +R++ L+ GN+ A + LD YLSA
Sbjct: 3 IYSISIVIVLIALTAFFVAAEFAIVKVRSSRIDYLIAEGNNRATSVKTVITNLDEYLSAC 62
Query: 75 QLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
QLGIT+++L +GW G+PA+ ++ LF ++++ I +V++ FL ITFLHVV+GE
Sbjct: 63 QLGITVTALGIGWFGKPALKQMFDTLFVNLNISTQLADI--FAVILVFLFITFLHVVIGE 120
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGIN-PKEHDGTHS 193
+ PK+ AI K+E+ +LF A+PL F+ + +P + L + A K +G+ PK HD HS
Sbjct: 121 LAPKTFAIQKAEQVSLFVAKPLTFFYRMAFPFIWLLNGSARIITKLLGLKPPKGHDEVHS 180
Query: 194 EEE 196
EE+
Sbjct: 181 EED 183
>ref|NP_455236.1| (NC_003198) haemolysin-related protein [Salmonella enterica subsp.
enterica serovar Typhi]
ref|NP_459659.1| (NC_003197) putative CBS domain-containing protein [Salmonella
typhimurium LT2]
sp|Q9R874|CORC_SALTY Magnesium and cobalt efflux protein corC
gb|AAL19618.1| (AE008726) putative CBS domain-containing protein [Salmonella
typhimurium LT2]
emb|CAD05138.1| (AL627267) haemolysin-related protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 292
Score = 146 bits (369), Expect = 4e-34
Identities = 75/248 (30%), Positives = 136/248 (54%), Gaps = 2/248 (0%)
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
H + +EL ++ +S + +ID ++++ D +D ++IM PR M+ L +
Sbjct: 28 HGEPKNRDELLALIRDSGQNELIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQT 87
Query: 248 YEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPE 307
+E +D++++ +R+P KD+I G++ +DLL + ++++R ++VPE
Sbjct: 88 LDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRTAVVVPE 147
Query: 308 SASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQE-GINKL 366
S + ++L + + ++ H A+VIDE+GG +GL+T+EDI+E I+GEI DEYD + + +L
Sbjct: 148 SKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQL 207
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEV 426
+ + + +E +A F E E T+GG V +P G+TI GY F+V
Sbjct: 208 SRHTWTIRALASIEDFNDAFGTHFSDE-EVDTIGGLVMQAFGHLPARGETIDIDGYQFKV 266
Query: 427 LSVDGARI 434
D RI
Sbjct: 267 AMADSRRI 274
>gb|AAD09823.1| (AF116773) magnesium efflux protein CorC [Salmonella typhimurium]
Length = 273
Score = 146 bits (369), Expect = 4e-34
Identities = 75/248 (30%), Positives = 136/248 (54%), Gaps = 2/248 (0%)
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
H + +EL ++ +S + +ID ++++ D +D ++IM PR M+ L +
Sbjct: 9 HGEPKNRDELLALIRDSGQNELIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQT 68
Query: 248 YEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPE 307
+E +D++++ +R+P KD+I G++ +DLL + ++++R ++VPE
Sbjct: 69 LDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVLRTAVVVPE 128
Query: 308 SASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQE-GINKL 366
S + ++L + + ++ H A+VIDE+GG +GL+T+EDI+E I+GEI DEYD + + +L
Sbjct: 129 SKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDEEDDIDFRQL 188
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEV 426
+ + + +E +A F E E T+GG V +P G+TI GY F+V
Sbjct: 189 SRHTWTIRALASIEDFNDAFGTHFSDE-EVDTIGGLVMQAFGHLPARGETIDIDGYQFKV 247
Query: 427 LSVDGARI 434
D RI
Sbjct: 248 AMADSRRI 255
>ref|NP_212193.1| (NC_001318) hemolysin (tlyC) [Borrelia burgdorferi]
pir||C70107 hemolysin (tlyC) homolog - Lyme disease spirochete
gb|AAC66449.1| (AE001119) hemolysin (tlyC) [Borrelia burgdorferi]
Length = 259
Score = 146 bits (369), Expect = 4e-34
Identities = 75/233 (32%), Positives = 137/233 (58%), Gaps = 2/233 (0%)
Query: 212 SVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKD 271
++E +IKN +T KEIM PR ++ +D S +E + +V +R+P G+ D
Sbjct: 26 NIETSLIKNFNALKETVVKEIMIPRIGVIFVDYAKSKDELLKVVTSSSHSRFPVYHGTID 85
Query: 272 NIIGMVHIRDLLSRSIFTPKMH-DFNQIVRKMIIVPESASISQILIKMKKEQIHTALVID 330
NI+G++H RD+L D I+RK++ VPES +L + ++ +H A+V+D
Sbjct: 86 NIVGIIHTRDILLHMCKKDFYEIDLKDIMRKVMFVPESKKTDSLLKEFQENHVHIAIVVD 145
Query: 331 EYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEF 390
EYGG +GL+T+EDI+EEI+G+I DE+D + + I +L++G + + + +E + E L++
Sbjct: 146 EYGGVSGLVTLEDILEEIVGDIQDEFDNELDEIVRLDDGSYLCDARILIEDLNEKLNLNL 205
Query: 391 DKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVKQD 443
+ TLGG+V+ L R+P++ + + + F + ++ IK +K +++
Sbjct: 206 PNG-DFDTLGGFVYDLFGRIPLKNEKVEYNNLVFSIKNMHQRNIKVIKISEKE 257
>sp|Q54318|HLYC_TREHY Hemolysin C
pir||T46749 hemolysin tlyC [validated] - Treponema hyodysenteriae
emb|CAA51657.1| (X73141) hemolysin [Brachyspira hyodysenteriae]
Length = 268
Score = 145 bits (367), Expect = 7e-34
Identities = 75/232 (32%), Positives = 135/232 (57%), Gaps = 3/232 (1%)
Query: 210 IDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGS 269
+ E EII N + S +EIM PR D+V + E+SY++ I + +R P K
Sbjct: 29 LTEAEREIITNTIELKSKSVREIMVPRVDVVMIPMESSYDKVIKAFNRDRNSRIPVYKDG 88
Query: 270 KDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI 329
D+I+G+++++DL+ K +I+ K + VP S S+ ++L +++QIH A+V+
Sbjct: 89 IDDIVGVLYVKDLIDAE---EKNFSLKKILHKPLFVPISISLMELLKNFREKQIHIAMVV 145
Query: 330 DEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIE 389
DEYGG +G+++MED++E+I+G+I DEYD + E I ++G + ++ ++ + +
Sbjct: 146 DEYGGFSGIVSMEDVLEQIIGDIRDEYDEEDEEIKSNDDGTYLVDARTRIDDFNKYEILP 205
Query: 390 FDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVK 441
+ E T+GG++FS L R+P + I +GYSF V+ G + +++ K
Sbjct: 206 PIPDDEADTVGGFLFSYLGRLPKRNEDIEYNGYSFTVVGKSGNIVTKIRIEK 257
>ref|NP_656153.1| (NC_003995) hypothetical protein predicted by GeneMark [Bacillus
anthracis A2012] [Bacillus anthracis str. A2012]
Length = 266
Score = 145 bits (367), Expect = 7e-34
Identities = 87/246 (35%), Positives = 141/246 (56%), Gaps = 5/246 (2%)
Query: 199 IIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKG 258
++V ES + G I+ E + + +F D AKEIM PR +M + +E EE + + +
Sbjct: 1 MLVSESYKNGEINQSEYKYVNKIFEFDDRIAKEIMVPRTEMHIIRKEMPAEEALQKMSRE 60
Query: 259 HFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHD--FNQIVRKMIIVPESASISQILI 316
+TRYP G KD++IG V+ +D+ + + + + Q +R +I+V +S I + +
Sbjct: 61 KYTRYPVVDGDKDHVIGFVNFKDIFTDFVQHKAVRNKKVEQYIRPIILVIDSIPIHDLFL 120
Query: 317 KMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL-KQEGINKLEEGVFELEG 375
KM+K++ H A++IDEYGGT+GL+T+EDI+EEI+G+I DE+D +Q I ++ E LEG
Sbjct: 121 KMQKQRTHIAILIDEYGGTSGLVTVEDILEEIVGDIQDEFDTDEQPEIQQVSETKTILEG 180
Query: 376 MLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIK 435
+ + V L + D T+GG++ + + E D I Y F V +DG IK
Sbjct: 181 KVLVSEVNTLLGLTIDDNGVD-TIGGWILTKNIEI-AEEDFIEIENYKFCVKELDGHYIK 238
Query: 436 RLKAVK 441
RL+ K
Sbjct: 239 RLEVTK 244
>ref|NP_624577.1| (NC_003888) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
pir||T37160 probable integral membrane protein - Streptomyces coelicolor
emb|CAB53285.1| (AL109972) putative integral membrane protein [Streptomyces
coelicolor A3(2)]
Length = 339
Score = 145 bits (366), Expect = 1e-33
Identities = 94/331 (28%), Positives = 172/331 (51%), Gaps = 6/331 (1%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
L L V LL++ + FFV +EFALV ++ R+E+ V G AK AL + L L+ Q
Sbjct: 5 LALFVTVLLLVGSGFFVAAEFALVAAKRHRMEKAVADGQRGAKAALAGMRELSLMLAGAQ 64
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEI 135
LGIT+ +L LG V +PAI+ L L + L + ++ +A + + FLH+VLGE+
Sbjct: 65 LGITVCTLGLGSVSKPAISHELDPLLHELGL--PAALSYGVAFALAMIVVVFLHMVLGEM 122
Query: 136 VPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSE 194
PKS AIA E++ + A P P++R+ + I++ ++ + P+ E H+
Sbjct: 123 APKSWAIAHPERSAMLLAPPFRAVTTAVRPLIRVLNRISNALVRLCRVAPRDELASVHNR 182
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
++L +V ES R G+I + +++ + +T +++M P +V +D EE + +
Sbjct: 183 DQLTHLVEESERLGLISETDSDLLTRSLTEPETPVRDLMAPAAGIVAVDAGAEAEEILAL 242
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQI 314
TR +D I+G VH RD+L + + R + + E A++++
Sbjct: 243 AAAHDRTR--LLVRQEDAILGSVHARDVLVARA-QGRATGARALARPVPELAEDATVAEA 299
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDII 345
+ +++ + A+V D G G+++++D++
Sbjct: 300 IEVLRRRRASLAVVRDGAGRLTGIVSLDDLL 330
>ref|NP_406143.1| (NC_003143) putative membrane protein [Yersinia pestis]
emb|CAC92860.1| (AJ414153) putative membrane protein [Yersinia pestis]
Length = 292
Score = 145 bits (365), Expect = 1e-33
Identities = 75/253 (29%), Positives = 139/253 (54%), Gaps = 2/253 (0%)
Query: 183 INPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCL 242
+N H + +L ++ +S + +ID ++++ D ++ ++IM PR MV L
Sbjct: 23 LNQLFHGEPKNRGDLVELIRDSEQNDLIDPDTRDMLEGVMDIAEQRVRDIMIPRSQMVTL 82
Query: 243 DEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKM 302
+ +E +D++++ +R+P KD+I G++ +DLL + ++++R
Sbjct: 83 KRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRTDSEPFSIDKVLRTA 142
Query: 303 IIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQE- 361
I+VPES + ++L + + ++ H A+VIDE+GG +GL+T+EDI+E I+GEI DEYD +++
Sbjct: 143 IVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGEIEDEYDDEEDR 202
Query: 362 GINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHG 421
+ +L + + + +E E + F + E T+GG V +P G+TI G
Sbjct: 203 DVRQLSRHTYTIRALTQIEDFNEVFNTHFSDD-EVDTIGGLVMQAFGHLPARGETIEIEG 261
Query: 422 YSFEVLSVDGARI 434
Y F+V D RI
Sbjct: 262 YLFKVAMADSRRI 274
>ref|NP_654551.1| (NC_003995) CBS, CBS domain [Bacillus anthracis A2012] [Bacillus
anthracis str. A2012]
Length = 213
Score = 144 bits (363), Expect = 2e-33
Identities = 78/197 (39%), Positives = 121/197 (60%), Gaps = 3/197 (1%)
Query: 164 YPVVRLFDVIAHFFLKKMGINP-KEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAX 222
YP + + A G++P EH+ HSEEEL++I+ ES G I+ E + + N
Sbjct: 2 YPFIWALNGSARLVTGLFGLHPASEHEVAHSEEELRLILSESYESGEINQREFKYVNNIF 61
Query: 223 DFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL 282
+F + AKEIM PR +++ L E+ +E +I I+ + +TRYP KD IIGMV+++DL
Sbjct: 62 EFDNRVAKEIMVPRTEVIGLYEDEPFETHIKIIAQEKYTRYPVFGEDKDEIIGMVNVKDL 121
Query: 283 LSRSIFTPKMHD--FNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLT 340
R + + + R +I V E+ I +L++M+++ I A++ DEYGGTAG++T
Sbjct: 122 FIRYMDGNRDEECSITPYTRPVIEVLENIPIHDLLLQMQRKHIPLAVLYDEYGGTAGIVT 181
Query: 341 MEDIIEEIMGEISDEYD 357
+EDI+EEI+GEI DEYD
Sbjct: 182 LEDILEEIVGEIRDEYD 198
>ref|NP_438468.1| (NC_000907) hemolysin, putative [Haemophilus influenzae Rd]
sp|Q57368|CORC_HAEIN Magnesium and cobalt efflux protein corC
pir||G64060 conserved hypothetical protein HI0301 - Haemophilus influenzae
gb|AAC21966.1| (U32716) hemolysin, putative [Haemophilus influenzae Rd]
Length = 299
Score = 143 bits (361), Expect = 4e-33
Identities = 70/255 (27%), Positives = 145/255 (56%), Gaps = 4/255 (1%)
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
+ EEL ++ +S + +ID E+I+ + ++ ++IM PR ++ ++++ +
Sbjct: 33 NREELVEVIRDSEQNDLIDQNTREMIEGVMEIAELRVRDIMIPRSQIIFIEDQQDLNTCL 92
Query: 253 DIVLKGHFTRYPYCKGS--KDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESAS 310
+ +++ +R+P + +DNI+G++H +DLL ++ D + ++R ++IVPES
Sbjct: 93 NTIIESAHSRFPVIADADDRDNIVGILHAKDLLKFLREDAEVFDLSSLLRPVVIVPESKR 152
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKLEEG 369
+ ++L + E+ H A+V+DE+G +GL+T+EDI+E+I+G+I DE+D ++ I +L
Sbjct: 153 VDRMLKDFRSERFHMAIVVDEFGAVSGLVTIEDILEQIVGDIEDEFDEEEIADIRQLSRH 212
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSV 429
+ + + D++ + +FD E E T+GG + +P G+ I+ F+V S
Sbjct: 213 TYAVRALTDIDDFNAQFNTDFDDE-EVDTIGGLIMQTFGYLPKRGEEIILKNLQFKVTSA 271
Query: 430 DGARIKRLKAVKQDQ 444
D R+ +L+ D+
Sbjct: 272 DSRRLIQLRVTVPDE 286
>ref|NP_246122.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK03269.1| (AE006158) unknown [Pasteurella multocida]
Length = 419
Score = 143 bits (361), Expect = 4e-33
Identities = 114/433 (26%), Positives = 205/433 (47%), Gaps = 31/433 (7%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
+ + +L++++A+F SE L+ + RL L + G+ AK A K+ ++ D LS +
Sbjct: 9 LFITLIILLIISAYFSGSETGLLSANRYRLRHLAEKGHRGAKKAEKLLKKTDVLLSLILI 68
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
L ++ AI ++ V IA ++TF+ ++ EI+
Sbjct: 69 CNNLVNITAS-----AITTIIGMRLYG-----------DAGVAIATGALTFVMLIFAEIL 112
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEE 196
PK++A EK ++ L VF +F P+V L ++I L + + + S EE
Sbjct: 113 PKTIAARYPEKVAFTSSHLLSVFLRLFTPLVYLMNLIIQGILALLRLKSDNKSTSLSPEE 172
Query: 197 LKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVL 256
L+ IV ES + I S E++ + D + +IM PR D+ +D ++ ++ + +
Sbjct: 173 LRSIVNESGK--FIPSAHQEMLLSILDLEGVTVDDIMVPRNDIGGIDIDDDWKAIMRQLN 230
Query: 257 KGHFTRYPYCKGSKD-NIIGMVHIRDLLSRSIFTPKMHDFNQ--IVR---KMIIVPESAS 310
R KG+ D NI+GM+ +R+ + ++FN+ ++R ++ +PE
Sbjct: 231 HAAHGRVVLYKGNMDENILGMLRVREAYRLML---DKNEFNKETLIRAADEVYFIPEGTP 287
Query: 311 ISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEI--SDEYDLKQEGINKLEE 368
++ L+ + + LV+DEYG GL+T+EDI+EEI+GE S + E I + +
Sbjct: 288 LNSQLLNFRNNKERIGLVVDEYGDIKGLVTLEDILEEIVGEFTTSTAPSINDEVIPQ-SD 346
Query: 369 GVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLS 428
G +EG +L + + D E + T G + LE +P EG +G +L
Sbjct: 347 GSLIIEGSANLRDLNKLFDWNLDTE-DARTFNGLILEHLEEIPEEGTVCEINGLQITILE 405
Query: 429 VDGARIKRLKAVK 441
V+ IK+ K +K
Sbjct: 406 VNDNMIKQAKVIK 418
>ref|NP_601486.1| (NC_003450) COG1253:Hemolysins and related proteins containing CBS
domains [Corynebacterium glutamicum]
dbj|BAB99679.1| (AP005281) Uncharacterized CBS domain-containing proteins
[Corynebacterium glutamicum ATCC 13032]
Length = 440
Score = 142 bits (358), Expect = 8e-33
Identities = 109/437 (24%), Positives = 223/437 (50%), Gaps = 35/437 (8%)
Query: 14 SILMLMVAFLLVLL-NAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLS 72
S++ L +A ++ LL + E AL V + R+E+++K S + L++ +++
Sbjct: 4 SVIWLSIATVVALLFSGLLGAVESALSSVSRARVEQMLKDEASGSASLLRVIDERALHIN 63
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
+ TL + AA+F + N + + +V+A + ++ L +
Sbjct: 64 MLIMLRTLLDAS-------------AAVFAGA-IAVNVMDSWAWGIVLAIVVVSLLTFAV 109
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTH 192
+ +++ L +A L + P+ R I + G +G +
Sbjct: 110 VGVFGRTVGRKNPYSVMLRSAVVLSGLAKILGPIARGLIWIGNIIAPGPGFR----NGPY 165
Query: 193 SEE-ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
+ E EL+ +V + GI++ E +I++ D + T+ +++M PR +M+ ++ + +
Sbjct: 166 ATEVELREMVDIAQEHGIVEIEERRMIQSVFDLASTTVRQVMVPRPEMIWIESGKTAGQA 225
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTP---KMHDFNQIVRKMIIVPES 308
+ ++ +R P + D+IIG+V+++DL+ ++ + K ++++R+ VP+S
Sbjct: 226 TALCVRSGHSRIPVIGENVDDIIGIVYLKDLVQKTYYATDGGKSVLVDEVMREATFVPDS 285
Query: 309 ASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG-INKLE 367
S+ +L +M+++ H A+++DEYGG AGL+++EDI+EEI+GEI+DEYD ++ I K+
Sbjct: 286 KSLDALLQEMQEDHKHIAILVDEYGGVAGLISIEDILEEIVGEIADEYDAREVAPIEKIG 345
Query: 368 EGVFELEGMLDLESVEEALHIEFDKECE-------QV-TLGGYVFSLLERMPMEGDTIVS 419
+ + + L LE +++ + E D E E QV T+GG + L R+P+ G T+ +
Sbjct: 346 DRTYRVVSRLSLEDLKDHIEEELDLEIEFGDEIEDQVDTVGGLIAFELGRVPLPGATVET 405
Query: 420 HGYSFEVLSVDGARIKR 436
G L+ +GA+ +R
Sbjct: 406 CGLK---LTAEGAKNRR 419
>gb|AAC36474.1| (AF085347) integral membrane protein CorC [Salmonella typhimurium]
Length = 292
Score = 142 bits (358), Expect = 8e-33
Identities = 73/248 (29%), Positives = 134/248 (53%), Gaps = 2/248 (0%)
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
H + +EL ++ +S + +ID ++++ D +D ++IM PR M+ L +
Sbjct: 28 HGEPKNRDELLALIRDSGQNELIDEDTRDMLEGVMDIADQRVRDIMIPRSQMITLKRNQT 87
Query: 248 YEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPE 307
+E +D++++ +R+P KD+I G++ +D L + ++++R ++VPE
Sbjct: 88 LDECLDVIIESAHSRFPVISEDKDHIEGILMAKDFLPFMRSDAEAFSMDKVLRTAVVVPE 147
Query: 308 SASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQE-GINKL 366
S + ++L + + ++ H A+VIDE+GG +GL+T+EDI+E I+G I DEYD + + +L
Sbjct: 148 SKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVGVIEDEYDEEDDIDFRQL 207
Query: 367 EEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEV 426
+ + + +E +A F E E T+GG V +P G+TI GY F+V
Sbjct: 208 SRHTWTIRALASIEDFNDAFGTHFSDE-EVDTIGGLVMQAFGHLPARGETIDIDGYQFKV 266
Query: 427 LSVDGARI 434
D RI
Sbjct: 267 AMADSRRI 274
>ref|NP_230606.1| (NC_002505) hemolysin, putative [Vibrio cholerae]
sp|Q9KTE3|CORC_VIBCH Magnesium and cobalt efflux protein corC
pir||B82261 probable hemolysin VC0959 [imported] - Vibrio cholerae (group O1
strain N16961)
gb|AAF94121.1| (AE004177) hemolysin, putative [Vibrio cholerae]
Length = 291
Score = 142 bits (357), Expect = 1e-32
Identities = 72/250 (28%), Positives = 140/250 (55%), Gaps = 2/250 (0%)
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
+EL ++ +S +ID ++++ + ++ ++IM PR MV +D ++ + + I
Sbjct: 33 QELVDVIRDSEVNDLIDHDTRDMLEGVMEIAEMRVRDIMIPRSQMVTIDRTHNLDALVAI 92
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQI 314
+ +RYP KD++ G++ +DLL + +++R ++VPES + ++
Sbjct: 93 MTDAQHSRYPVISEDKDHVEGILLAKDLLKYLGSNCAPFNIQEVIRPAVVVPESKRVDRL 152
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEY-DLKQEGINKLEEGVFEL 373
L + ++E+ H A+V+DE+GG +GL+T+EDI+EEI+G+I DE+ D +Q+ I +L + F +
Sbjct: 153 LKEFREERYHMAIVVDEFGGVSGLVTIEDILEEIVGDIEDEFDDEEQKDIRQLSKHTFSV 212
Query: 374 EGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGAR 433
+ + +E +F E E T+GG V + +P G+ + GY+F+V + D R
Sbjct: 213 KALTTIEDFNHTFGTKFSDE-EVDTVGGLVMTAFGHLPARGEVVDIAGYNFKVTAADSRR 271
Query: 434 IKRLKAVKQD 443
+ L+ D
Sbjct: 272 VVALQVTVPD 281
>ref|NP_518649.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD14056.1| (AL646059) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 298
Score = 141 bits (355), Expect = 2e-32
Identities = 83/247 (33%), Positives = 139/247 (55%), Gaps = 5/247 (2%)
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
S EL I+ ++ +ID+ +I+ SD A++IM PR M ++ ++ E I
Sbjct: 31 SRAELLEILQDAHARNLIDADSLSMIEGVFQVSDLCARDIMIPRAQMDAINIADAPAEFI 90
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASIS 312
V + +R+P +GS+DNIIG++ +DLL +T + D ++R + +PES ++
Sbjct: 91 PFVQQAAHSRFPVYEGSRDNIIGILLAKDLLR--YYTDEGFDVRDMLRPAVFIPESKRLN 148
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL--EEGV 370
+L + + H A+V+DEYGG AGL+T+ED++E+I+G+I DEYD QE N L +G
Sbjct: 149 VLLRDFRVNRNHIAIVVDEYGGVAGLITIEDVLEQIVGDIEDEYDFDQEEDNILPTADGH 208
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVD 430
+ G+ ++ EA F E + T+GG + + L R+P G+ IV F+VL D
Sbjct: 209 MRVRGLTEISQFNEAFGTHFSDE-DVDTVGGLLANHLGRVPHRGEKIVLGTLQFDVLRAD 267
Query: 431 GARIKRL 437
+++ L
Sbjct: 268 ARQVQVL 274
>ref|NP_245970.1| (NC_002663) unknown [Pasteurella multocida]
sp|Q9CM13|CORC_PASMU Magnesium and cobalt efflux protein corC
gb|AAK03117.1| (AE006144) unknown [Pasteurella multocida]
Length = 300
Score = 141 bits (355), Expect = 2e-32
Identities = 73/253 (28%), Positives = 137/253 (53%), Gaps = 2/253 (0%)
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
+ EEL ++ +S + +ID E+I+ + ++ ++IM PR +V + + + + +
Sbjct: 35 NREELVEVIRDSEQNELIDQNTREMIEGVMEIAELRVRDIMIPRSQIVFIHTDQNLDSCL 94
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASIS 312
D ++ +R+P +DNI G++H +DLL + D ++R +IVPES +
Sbjct: 95 DTIIVSAHSRFPVITDERDNIAGILHAKDLLRFLRSNAEEFDLMPLLRPAVIVPESKRVD 154
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQ-EGINKLEEGVF 371
++L + E+ H A+V+DE+G +GL+T+EDI+E+I+G+I DE+D ++ I +L +
Sbjct: 155 RMLKDFRSERFHMAIVVDEFGAVSGLVTIEDILEQIVGDIEDEFDEEEIVNIRQLSRHTY 214
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
+ + D+E + + F E E T+GG V +P G+ I F+V S D
Sbjct: 215 AVRALTDIEDFNQQFNTHFADE-EVDTIGGVVMQAFGYLPKRGEEITIENIGFKVTSADS 273
Query: 432 ARIKRLKAVKQDQ 444
R+ +L+ D+
Sbjct: 274 RRLIQLRITVTDE 286
>ref|NP_645619.1| (NC_003923) ORFID:MW0802~hypothetical protein, similar to hemolysin
[Staphylococcus aureus subsp. aureus MW2]
dbj|BAB94667.1| (AP004824) ORFID:MW0802~hypothetical protein, similar to hemolysin
[Staphylococcus aureus subsp. aureus MW2]
Length = 346
Score = 140 bits (354), Expect = 2e-32
Identities = 94/348 (27%), Positives = 177/348 (50%), Gaps = 25/348 (7%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
M++ +L+ ++ FF SE AL KT+ + G+ AK +K+ ++ +++ +
Sbjct: 1 MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILI 60
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
G ++++ L P + ++A + +SV IA +T + +++ E++
Sbjct: 61 GNNVANILL-----PTLVTIMALRW-------------GISVGIASAVLTVVIILISEVI 102
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGIN-PKEHDGTHSEE 195
PKS+A +K T +++ +VF P+ L + + + + P+EH S+E
Sbjct: 103 PKSVAATFPDKITRLVYPIINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQ--FSKE 160
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEI-MTPRKDMVCLDEENSYEENIDI 254
E K ++ + EG ++ +E ++ +F + K++ TPR ++ +YEE +
Sbjct: 161 EFKTMLAIAGHEGALNEIETSRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYET 220
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQI 314
V+ +TRYP +G DNIIG+ H + LL+ S K + K + V E +
Sbjct: 221 VMNKPYTRYPVYEGDIDNIIGVFHSKYLLAWS--NKKENQITNYSAKPLFVNEHNKAEWV 278
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMG-EISDEYDLKQE 361
L KM + H A+V+DE+GGT +++ ED+IEE++G EI DE D K++
Sbjct: 279 LRKMTISRKHLAIVLDEFGGTEAIVSHEDLIEELLGMEIEDEMDKKEK 326
>ref|NP_240255.1| (NC_002528) hypothetical protein [Buchnera sp. APS]
sp|P57518|CORC_BUCAI Magnesium and cobalt efflux protein corC
dbj|BAB13141.1| (AP001119) hypothetical protein [Buchnera sp. APS]
Length = 291
Score = 140 bits (352), Expect = 4e-32
Identities = 73/253 (28%), Positives = 138/253 (53%), Gaps = 2/253 (0%)
Query: 183 INPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCL 242
+N HD + EEL +++ +S + +ID ++++ + KEIM PR M+ L
Sbjct: 22 LNQIFHDEPKNREELLVLIRDSEQNELIDQDTCDMLEGVMHIAKKRIKEIMIPRTQMITL 81
Query: 243 DEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKM 302
++ E +D++++ +R+P + + G + +DLL + + I+R
Sbjct: 82 KLHHNLNECLDVIIESAHSRFPVMSNDNNYVEGFLIAKDLLPFMKQSANIFCIKNILRPA 141
Query: 303 IIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQE- 361
++VPES + ++L + + ++ H A+VIDE+G +GL+T+EDI+E I+GEI DEYD ++
Sbjct: 142 VVVPESKHVDRMLKEFRSKRNHMAIVIDEFGAVSGLVTIEDILELIVGEIEDEYDDEETL 201
Query: 362 GINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHG 421
I K+++ F + + +++ E + F E E T+GG V +P G++I G
Sbjct: 202 NIRKIQKSTFSIRALTEIKEFNETFNTNFSDE-EVDTIGGLVMKEFGHLPSRGESINIDG 260
Query: 422 YSFEVLSVDGARI 434
YSF++ D ++
Sbjct: 261 YSFKISIADSRKV 273
>ref|NP_371443.1| (NC_002758) hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
ref|NP_374041.1| (NC_002745) hypothetical protein, similar to hemolysin
[Staphylococcus aureus subsp. aureus N315]
dbj|BAB42019.1| (AP003131) ORFID:SA0780~hypothetical protein, similar to hemolysin
[Staphylococcus aureus subsp. aureus N315]
dbj|BAB57081.1| (AP003360) hypothetical protein [Staphylococcus aureus subsp.
aureus Mu50]
Length = 346
Score = 140 bits (352), Expect = 4e-32
Identities = 94/348 (27%), Positives = 176/348 (50%), Gaps = 25/348 (7%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
M++ +L+ ++ FF SE AL KT+ + G+ AK +K+ ++ +++ +
Sbjct: 1 MIIAIIILIFISFFFSGSETALTAANKTKFKTEADKGDKKAKGIVKLLEKPSEFITTILI 60
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
G ++++ L P + ++A + +SV IA +T + +++ E++
Sbjct: 61 GNNVANILL-----PTLVTIMALRW-------------GISVGIASAVLTVVIILISEVI 102
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGIN-PKEHDGTHSEE 195
PKS+A +K T +++ +VF P+ L + + + + P+EH S+E
Sbjct: 103 PKSVAATFPDKITRLVYPIINICVIVFRPITLLLNKLTDSINRSLSKGQPQEHQ--FSKE 160
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEI-MTPRKDMVCLDEENSYEENIDI 254
E K ++ + EG ++ +E ++ +F + K++ TPR ++ +YEE +
Sbjct: 161 EFKTMLAIAGHEGALNEIETSRLEGVINFENLKVKDVDTTPRINVTAFASNATYEEVYET 220
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQI 314
V+ +TRYP +G DNIIG+ H + LL+ S K K + V E +
Sbjct: 221 VMNKPYTRYPVYEGDIDNIIGVFHSKYLLAWS--NKKEDQITNYSAKPLFVNEHNKAEWV 278
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMG-EISDEYDLKQE 361
L KM + H A+V+DE+GGT +++ ED+IEE++G EI DE D K++
Sbjct: 279 LRKMTISRKHLAIVLDEFGGTEAIVSHEDLIEELLGMEIEDEMDKKEK 326
>gb|AAG00559.2|AF287009_4 (AF287009) GldE [Flavobacterium johnsoniae]
Length = 431
Score = 140 bits (352), Expect = 4e-32
Identities = 100/421 (23%), Positives = 204/421 (47%), Gaps = 22/421 (5%)
Query: 22 FLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLS 81
F+L+ L+A +E AL + + +++ ++ +S K+ + R L+ L + +
Sbjct: 25 FILLFLSAIVSGAEVALFSLSQKDIDDTLQENDSKGKIISNLLDRPKKLLAT--LLVANN 82
Query: 82 SLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLA 141
L +G V + + +F + E+P+ + V++ +TF ++ GE++PK A
Sbjct: 83 FLNIGVV--ILFSFIGRNIFSGV---ESPVLKFILEVIL----VTFFILLFGEVLPKVYA 133
Query: 142 IAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIV 201
+ K A + + + P+ + + K+G + L++
Sbjct: 134 SRNNIKFAKRFAYSISILDKLLSPISLPMRRVTLYLHNKLGKQKNNFSINQLSQALELTD 193
Query: 202 GESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFT 261
E + E +I++ F +T K++M+PR D+ L+ + +++ F+
Sbjct: 194 SEGT-----STEEQKILEGIVSFGNTDTKQVMSPRIDIFALEITEPFSAICPKIIEKGFS 248
Query: 262 RYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKE 321
R P + + D I G++ ++DLL D+ ++R+ VPE+ + +L +
Sbjct: 249 RIPVYRDNIDQIEGVLFVKDLLPH--IDKDDFDWASLMREPFFVPENKKLDNLLKDFQSL 306
Query: 322 QIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLES 381
+ H A+V+DEYGGT+GL+++ED+IEEI+G+ISDE+D + ++++E F EG ++L+
Sbjct: 307 KSHLAIVVDEYGGTSGLVSLEDVIEEIVGDISDEFDDENLNFSQIDEKNFLFEGKINLKD 366
Query: 382 VEEALHIEFD----KECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRL 437
+ ++ D + E TL G++ +L P + I F + +VD R+K++
Sbjct: 367 FYRIVDVDEDVFEASKGEAETLAGFILEILGNFPKKDQKIAFENCVFTIETVDKKRVKQI 426
Query: 438 K 438
K
Sbjct: 427 K 427
>ref|NP_230209.1| (NC_002505) hemolysin, putative [Vibrio cholerae]
pir||G82309 probable hemolysin VC0558 [imported] - Vibrio cholerae (group O1
strain N16961)
gb|AAF93726.1| (AE004141) hemolysin, putative [Vibrio cholerae]
Length = 426
Score = 139 bits (350), Expect = 7e-32
Identities = 104/436 (23%), Positives = 213/436 (48%), Gaps = 30/436 (6%)
Query: 10 DPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDT 69
D S IL ++A L++++A+F SE ++ + + RL+ L G+ AK K+ R D
Sbjct: 3 DISTGILFALLA-CLIIISAYFSGSETGMMALNRYRLKHLANSGHKGAKRVEKLLDRPDR 61
Query: 70 YLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLH 129
+ +G L ++ L +A+ + +R + V IA ++T +
Sbjct: 62 LIGLILIGNNLVNI------------LASAIATIIGMR----LYGDLGVAIATGALTLVI 105
Query: 130 VVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHD 189
+V E+ PK+LA E+ + ++ L + + P+V +++ + ++ +GI+PK
Sbjct: 106 LVFAEVTPKTLAALYPERVSYASSVLLTILMKLLSPLVLFVNLMTNGLIRILGISPKHGK 165
Query: 190 GTH-SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSY 248
G H S EEL+ +V E+ G+I +++ + D + +IM PR ++ ++ + +
Sbjct: 166 GDHLSSEELRTVVNEA--GGLIPRRHQDMLLSILDLEHVTVNDIMIPRNEITGININDDW 223
Query: 249 EENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQ-----IVRKMI 303
+ + ++ R + D ++G++ +R+ S F + +DFN+ ++
Sbjct: 224 KSIVRQLVHSPHGRVVLYRDKIDEVVGILRLREA---SRFMLEKNDFNKEMLLRAADEIY 280
Query: 304 IVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLK-QEG 362
+PE ++ L+K ++ + L++DEYG GL T+EDI+EEI+GE + +
Sbjct: 281 FIPEGTPLNVQLLKFQRNKERIGLIVDEYGEIIGLTTLEDILEEIVGEFTTSMSPSLADE 340
Query: 363 INKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGY 422
I +G F +EG ++ + ++L + + + TL G + LE +P ++ +
Sbjct: 341 ITPQGDGSFLIEGSANIRDINKSLKWKLPTDGPR-TLNGLILEHLEEIPASHLSVKVAQH 399
Query: 423 SFEVLSVDGARIKRLK 438
E+L ++ RIK +K
Sbjct: 400 KMEILELEENRIKLVK 415
>sp|Q57017|YFJD_HAEIN Hypothetical protein HI0107
Length = 420
Score = 139 bits (349), Expect = 9e-32
Identities = 113/432 (26%), Positives = 205/432 (47%), Gaps = 28/432 (6%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
+ ++ + ++L+A+F SE L+ + K RL L + GN AK A K+ ++ DT LS +
Sbjct: 9 LFIILIICLVLSAYFSGSETGLLSLNKYRLRFLSEQGNKGAKKAEKLLEKPDTLLSFILI 68
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
L +++ AIA ++ V IA +TF+ +V EI
Sbjct: 69 FNNLVNISAS-----AIATVIGMRLYG-----------DAGVAIATGLLTFVMLVFSEIF 112
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEE 196
PK++A +EK + F++ L +FYP+V L ++ ++ +G+ S EE
Sbjct: 113 PKTVAAMHAEKVSFFSSHILTSLLKIFYPLVWLMNIFTKSLMQIVGLKLDMQKQVISSEE 172
Query: 197 LKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVL 256
L+ IV E+ E + +++ + D + +IM PR ++ ++ ++ + + +
Sbjct: 173 LRSIVSEA-GEATPNEQHPQMLLSILDMETVTVDDIMVPRNEIGGINIDDDWRAIMRQLN 231
Query: 257 KGHFTRYPYCKGSKD-NIIGMVHIRD----LLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
R KGS D ++G++ +R+ LL ++ FT + + ++ +PES +
Sbjct: 232 HAAHNRVVLYKGSLDEQVLGILRVREAFRLLLEKNEFTKE--TLIRAADEVYFIPESTPL 289
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEI--SDEYDLKQEGINKLEEG 369
L + + LV+DEYG GL+T+EDI+EEI+G+ S + +E I + +G
Sbjct: 290 KTQLANFRTNKERIGLVVDEYGDIKGLVTLEDILEEIVGDFTTSTAPSIDKEVIQQ-SDG 348
Query: 370 VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSV 429
++G +L + + + E D E + T G + LE +P EG G +L V
Sbjct: 349 SMIIDGSANLRDLNKMFNWELDTE-DARTFNGLILEHLEEIPDEGTICEIDGLLITILEV 407
Query: 430 DGARIKRLKAVK 441
IK+ K VK
Sbjct: 408 GDNMIKQAKVVK 419
>ref|NP_273582.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||H81187 conserved hypothetical protein NMB0537 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF40966.1| (AE002409) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 274
Score = 137 bits (346), Expect = 2e-31
Identities = 81/269 (30%), Positives = 143/269 (53%), Gaps = 7/269 (2%)
Query: 175 HFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMT 234
+FF + + +E D S E++ ++ ++ + + D+ ++ DFSD ++ M
Sbjct: 9 NFFERLIARLAREPD---SAEDVLNLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAMI 65
Query: 235 PRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHD 294
R M L E +S E V+ +R+P KD ++G++H +DLL + +F P+
Sbjct: 66 TRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLL-KYMFNPEQFH 124
Query: 295 FNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISD 354
I+R + VPE S++ +L + ++++ H A+VIDEYGGT+GL+T EDIIE+I+GEI D
Sbjct: 125 LKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDIIEQIVGEIED 184
Query: 355 EYDL--KQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPM 412
E+D + I+ + + + ++E + E+ E E T+GG V L +P+
Sbjct: 185 EFDEDDSADNIHAVSSERWRIHAATEIEDINTFFGTEYSSE-EADTIGGLVIQELGHLPV 243
Query: 413 EGDTIVSHGYSFEVLSVDGARIKRLKAVK 441
G+ ++ G F V D R+ L A +
Sbjct: 244 RGEKVLIGGLQFTVARADNRRLHTLMATR 272
>dbj|BAA35309.1| (D90705) Hemolysin (tlyC) homolog [Escherichia coli]
dbj|BAA35313.1| (D90706) Hemolysin (tlyC) homolog [Escherichia coli]
Length = 231
Score = 137 bits (346), Expect = 2e-31
Identities = 70/213 (32%), Positives = 120/213 (55%), Gaps = 2/213 (0%)
Query: 223 DFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL 282
D +D ++IM PR M+ L + +E +D++++ +R+P KD+I G++ +DL
Sbjct: 2 DIADQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISEDKDHIEGILMAKDL 61
Query: 283 LSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTME 342
L + ++++R+ ++VPES + ++L + + ++ H A+VIDE+GG +GL+T+E
Sbjct: 62 LPFMRSDAEAFSMDKVLRQAVVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIE 121
Query: 343 DIIEEIMGEISDEYDLKQE-GINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGG 401
DI+E I+GEI DEYD + + +L + + + +E EA F E E T+GG
Sbjct: 122 DILELIVGEIEDEYDEEDDIDFRQLSRHTWTVRALASIEDFNEAFGTHFSDE-EVDTIGG 180
Query: 402 YVFSLLERMPMEGDTIVSHGYSFEVLSVDGARI 434
V +P G+TI GY F+V D RI
Sbjct: 181 LVMQAFGHLPARGETIDIDGYQFKVAMADSRRI 213
>ref|NP_283515.1| (NC_003116) hypothetical protein NMA0716 [Neisseria meningitidis
Z2491]
pir||G81914 hypothetical protein NMA0716 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84001.1| (AL162754) hypothetical protein NMA0716 [Neisseria meningitidis
Z2491]
Length = 274
Score = 137 bits (346), Expect = 2e-31
Identities = 80/269 (29%), Positives = 144/269 (52%), Gaps = 7/269 (2%)
Query: 175 HFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMT 234
+FF + + +E D S E++ ++ ++ + + D+ ++ DFSD ++ M
Sbjct: 9 NFFERLIARLAREPD---SAEDVLTLLRQAHEQEVFDADTLLRLEKVLDFSDLEVRDAMI 65
Query: 235 PRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHD 294
R M L E +S E V+ +R+P KD ++G++H +DLL + +F P+
Sbjct: 66 TRSRMNVLKENDSIERITAYVIDTAHSRFPVIGEDKDEVLGILHAKDLL-KYMFNPEQFH 124
Query: 295 FNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISD 354
I+R + VPE S++ +L + ++++ H A+VIDEYGGT+GL+T EDIIE+I+G+I D
Sbjct: 125 LKSILRPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDIIEQIVGDIED 184
Query: 355 EYDLKQ--EGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPM 412
E+D + + I+ + + + ++E + E+ E E T+GG V L +P+
Sbjct: 185 EFDEDESADNIHAVSAERWRIHAATEIEDINAFFGTEYSSE-EADTIGGLVIQELGHLPV 243
Query: 413 EGDTIVSHGYSFEVLSVDGARIKRLKAVK 441
G+ ++ G F V D R+ L A +
Sbjct: 244 RGEKVLIGGLQFTVARADNRRLHTLMATR 272
>ref|NP_417103.1| (NC_000913) Uncharacterized CBS domain-containing protein
[Escherichia coli K12]
Length = 420
Score = 137 bits (345), Expect = 3e-31
Identities = 103/428 (24%), Positives = 207/428 (48%), Gaps = 27/428 (6%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
M+++ ++V+++A+F SE ++ + + RL + K GN +AK K+ ++ D +S +
Sbjct: 1 MIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLI 60
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
G L ++ L +AL + +R V IA +TF+ +V E++
Sbjct: 61 GNNLVNI------------LASALGTIVGMR----LYGDAGVAIATGVLTFVVLVFAEVL 104
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEE 195
PK++A EK ++ L ++ P+V L + I ++ MGI G+ S+E
Sbjct: 105 PKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKE 164
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIV 255
EL+ IV ES + I +++ + D + +IM PR +++ +D + ++ + +
Sbjct: 165 ELRTIVHESRSQ--ISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQL 222
Query: 256 LKGHFTRYPYCKGSKDNIIGMVHIRD----LLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
R + S D+ I M+ +R+ + + FT + + ++ VPE +
Sbjct: 223 SHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKET--MLRAADEIYFVPEGTPL 280
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYD-LKQEGINKLEEGV 370
S L+K ++ + LV++EYG GL+T+EDI+EEI+G+ + E + +G
Sbjct: 281 STQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGS 340
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVD 430
++G ++ + +A + ++ + T+ G + LE +P+ G + Y ++L V
Sbjct: 341 VIIDGTANVREINKAFNWHLPED-DARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQ 399
Query: 431 GARIKRLK 438
IK++K
Sbjct: 400 DNMIKQVK 407
>ref|NP_660760.1| (NC_004061) hypothetical 33.3 kD protein in cutE-asnB [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM67971.1| (AE014118) hypothetical 33.3 kD protein in cutE-asnB [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 291
Score = 137 bits (345), Expect = 3e-31
Identities = 74/253 (29%), Positives = 138/253 (54%), Gaps = 2/253 (0%)
Query: 183 INPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCL 242
+N HD + EEL +++ +S + +ID ++++ + K+IM PR M+ L
Sbjct: 22 LNQIFHDEPKNREELLVLIRDSEQNELIDQDTCDMLEGVMHIAKKRIKDIMIPRTQMITL 81
Query: 243 DEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKM 302
+ + +DI+++ +R+P ++ + G + +DLL I+R
Sbjct: 82 KLNYNLNKCLDIIIESAHSRFPVMSRDQNYVEGFLIAKDLLPFMKHPEDAFCIKNILRSA 141
Query: 303 IIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQE- 361
++VPES S+ +L + + ++ H A+VIDE+G +GL+T+EDI+E I+GEI DEYD +++
Sbjct: 142 VVVPESKSVDTMLKEFRLKRSHMAIVIDEFGAVSGLVTIEDILELIVGEIQDEYDDEEKV 201
Query: 362 GINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHG 421
I KL++ +F ++ + +++ + F E E T+GG V +P GD I +G
Sbjct: 202 NIRKLKKCIFSIKALTEIKEFNDTFETNFSDE-EVDTIGGLVMKAFGHLPSRGDHINING 260
Query: 422 YSFEVLSVDGARI 434
Y+F+V D ++
Sbjct: 261 YNFKVSIADSRKV 273
>ref|NP_457149.1| (NC_003198) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
ref|NP_461609.1| (NC_003197) putative membrane protein [Salmonella typhimurium LT2]
gb|AAL21568.1| (AE008821) putative membrane protein [Salmonella typhimurium LT2]
emb|CAD05858.1| (AL627276) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 413
Score = 137 bits (344), Expect = 3e-31
Identities = 106/423 (25%), Positives = 203/423 (47%), Gaps = 27/423 (6%)
Query: 24 LVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSL 83
+V+++A+F SE ++ + + RL + K GN +AK K+ ++ D +S +G L ++
Sbjct: 1 MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNI 60
Query: 84 ALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIA 143
L +AL + +R V IA +TF+ +V E++PK++A
Sbjct: 61 ------------LASALGTIVGMR----LYGDAGVAIATGVLTFVVLVFAEVLPKTIAAL 104
Query: 144 KSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEEELKIIVG 202
EK ++ L ++ P+V L + I ++ MGI G+ S+EEL+ IV
Sbjct: 105 YPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRLMGIKTDIVVSGSLSKEELRTIVH 164
Query: 203 ESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTR 262
ES + I +++ + D S +IM PR +++ +D + ++ + R
Sbjct: 165 ESRSQ--ISRRNQDMLLSVLDLEKVSVDDIMVPRNEIIGIDINDDWKSIERQLTHSPHGR 222
Query: 263 YPYCKGSKDNIIGMVHIRD----LLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKM 318
+ S D+ I M+ +R+ + + FT +M + ++ VPE +S LIK
Sbjct: 223 IVLYRDSLDDAISMLRVREAWRLMAEKKEFTKEM--MLRAADEIYYVPEGTPLSTQLIKF 280
Query: 319 KKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYD-LKQEGINKLEEGVFELEGML 377
++ + LV++EYG GL+T+EDI+EEI+G+ + E + +G ++G
Sbjct: 281 QRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTA 340
Query: 378 DLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRL 437
++ + +A + ++ + T+ G + LE +P+ G + Y ++L V IK++
Sbjct: 341 NVREINKAFNWHLPED-DARTVNGVILEALEEIPVAGTRVRIEQYDIDILDVQENMIKQV 399
Query: 438 KAV 440
K V
Sbjct: 400 KVV 402
>ref|NP_438281.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
pir||H64142 hypothetical protein HI0107 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC21785.1| (U32696) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 403
Score = 136 bits (343), Expect = 4e-31
Identities = 113/423 (26%), Positives = 200/423 (46%), Gaps = 28/423 (6%)
Query: 26 LLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSLAL 85
+L+A+F SE L+ + K RL L + GN AK A K+ ++ DT LS + L +++
Sbjct: 1 MLSAYFSGSETGLLSLNKYRLRFLSEQGNKGAKKAEKLLEKPDTLLSFILIFNNLVNISA 60
Query: 86 GWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIAKS 145
AIA ++ V IA +TF+ +V EI PK++A +
Sbjct: 61 S-----AIATVIGMRLYG-----------DAGVAIATGLLTFVMLVFSEIFPKTVAAMHA 104
Query: 146 EKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIVGESL 205
EK + F++ L +FYP+V L ++ ++ +G+ S EEL+ IV E+
Sbjct: 105 EKVSFFSSHILTSLLKIFYPLVWLMNIFTKSLMQIVGLKLDMQKQVISSEELRSIVSEA- 163
Query: 206 REGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPY 265
E + +++ + D + +IM PR ++ ++ ++ + + + R
Sbjct: 164 GEATPNEQHPQMLLSILDMETVTVDDIMVPRNEIGGINIDDDWRAIMRQLNHAAHNRVVL 223
Query: 266 CKGSKD-NIIGMVHIRD----LLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKK 320
KGS D ++G++ +R+ LL ++ FT + + ++ +PES + L +
Sbjct: 224 YKGSLDEQVLGILRVREAFRLLLEKNEFTKE--TLIRAADEVYFIPESTPLKTQLANFRT 281
Query: 321 EQIHTALVIDEYGGTAGLLTMEDIIEEIMGEI--SDEYDLKQEGINKLEEGVFELEGMLD 378
+ LV+DEYG GL+T+EDI+EEI+G+ S + +E I + +G ++G +
Sbjct: 282 NKERIGLVVDEYGDIKGLVTLEDILEEIVGDFTTSTAPSIDKEVIQQ-SDGSMIIDGSAN 340
Query: 379 LESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
L + + + E D E + T G + LE +P EG G +L V IK+ K
Sbjct: 341 LRDLNKMFNWELDTE-DARTFNGLILEHLEEIPDEGTICEIDGLLITILEVGDNMIKQAK 399
Query: 439 AVK 441
VK
Sbjct: 400 VVK 402
>sp|P37908|YFJD_ECOLI Hypothetical protein yfjD
Length = 428
Score = 136 bits (342), Expect = 6e-31
Identities = 102/428 (23%), Positives = 207/428 (47%), Gaps = 27/428 (6%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
++++ ++V+++A+F SE ++ + + RL + K GN +AK K+ ++ D +S +
Sbjct: 9 LIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLI 68
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
G L ++ L +AL + +R V IA +TF+ +V E++
Sbjct: 69 GNNLVNI------------LASALGTIVGMR----LYGDAGVAIATGVLTFVVLVFAEVL 112
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEE 195
PK++A EK ++ L ++ P+V L + I ++ MGI G+ S+E
Sbjct: 113 PKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKE 172
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIV 255
EL+ IV ES + I +++ + D + +IM PR +++ +D + ++ + +
Sbjct: 173 ELRTIVHESRSQ--ISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQL 230
Query: 256 LKGHFTRYPYCKGSKDNIIGMVHIRD----LLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
R + S D+ I M+ +R+ + + FT + + ++ VPE +
Sbjct: 231 SHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKET--MLRAADEIYFVPEGTPL 288
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYD-LKQEGINKLEEGV 370
S L+K ++ + LV++EYG GL+T+EDI+EEI+G+ + E + +G
Sbjct: 289 STQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGS 348
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVD 430
++G ++ + +A + ++ + T+ G + LE +P+ G + Y ++L V
Sbjct: 349 VIIDGTANVREINKAFNWHLPED-DARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQ 407
Query: 431 GARIKRLK 438
IK++K
Sbjct: 408 DNMIKQVK 415
>ref|NP_289165.1| (NC_002655) Uncharacterized CBS domain-containing protein
[Escherichia coli O157:H7 EDL933]
Length = 420
Score = 135 bits (341), Expect = 8e-31
Identities = 103/428 (24%), Positives = 206/428 (48%), Gaps = 27/428 (6%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
M+++ ++V+++A+F SE ++ + + RL + K GN +AK K+ ++ D +S +
Sbjct: 1 MIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLI 60
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
G L ++ L +AL + +R V IA +TF+ +V E++
Sbjct: 61 GNNLVNI------------LASALGTIVGMR----LYGDAGVAIATGVLTFVVLVFAEVL 104
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEE 195
PK++A EK ++ L ++ P+V L + I ++ MGI G+ S+E
Sbjct: 105 PKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKE 164
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIV 255
EL+ IV ES + I +++ + D + +IM PR +++ +D + ++ + +
Sbjct: 165 ELRTIVHESRSQ--ISRRNQDMLLSVPDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQL 222
Query: 256 LKGHFTRYPYCKGSKDNIIGMVHIRD----LLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
R + S D+ I M+ +R+ + + FT + + + VPE +
Sbjct: 223 SHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKET--MLRAADXIYFVPEGTPL 280
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYD-LKQEGINKLEEGV 370
S L+K ++ + LV++EYG GL+T+EDI+EEI+G+ + E + +G
Sbjct: 281 STQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGS 340
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVD 430
++G ++ + +A + ++ + T+ G + LE +P+ G + Y ++L V
Sbjct: 341 VIIDGTANVREINKAFNWHLPED-DARTVNGVILEALEEIPVVGTRVRIGEYDIDILDVQ 399
Query: 431 GARIKRLK 438
IK++K
Sbjct: 400 DNMIKQVK 407
>ref|NP_406764.1| (NC_003143) putative membrane protein [Yersinia pestis]
emb|CAC92530.1| (AJ414156) putative membrane protein [Yersinia pestis]
Length = 427
Score = 133 bits (334), Expect = 5e-30
Identities = 102/436 (23%), Positives = 201/436 (45%), Gaps = 26/436 (5%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
++++ ++++++A+F SE ++ + + R+ L K GN A+ K+ R D +S +
Sbjct: 10 LIIILVIMIIVSAYFSASETGMMTLNRYRMRHLSKQGNRAARRVEKLLNRPDRLISLVLI 69
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
G L ++ L +AL + +R V IA +TF+ ++ E++
Sbjct: 70 GNNLVNI------------LASALATIVGIR----LYGDAGVAIATGVLTFVILIFAEVL 113
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDG-THSEE 195
PK++A E+ ++ L + P+V L + I + GI H S++
Sbjct: 114 PKTIAALYPERVAFPSSMLLAPLQKIMLPLVWLLNTITRGLMHLCGIRGNVHSSDAMSKD 173
Query: 196 ELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIV 255
EL+ IV ES + I +++ + D + +IM PR ++V +D + ++ + +
Sbjct: 174 ELRTIVSES--QSKISRRNQDMLISVLDLEKVTVSDIMVPRNEVVGIDINDDWKSIMRQL 231
Query: 256 LKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVR---KMIIVPESASIS 312
R + S D+ IGM+ +R+ R + K + ++R ++ +PE ++
Sbjct: 232 THSPHGRIVLYRQSLDDAIGMLRVREAY-RLMTEKKEFNKENLLRAADEIYFIPEGTPLN 290
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYD-LKQEGINKLEEGVF 371
L+K ++ + +++DEYG GL+T+EDI+EEI+G+ + E +N +G
Sbjct: 291 VQLVKFQRNKKKVGMIVDEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVNPQSDGSV 350
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
++G + V +A + + T+ G + LE +P + Y EVL V
Sbjct: 351 LIDGSASVREVNKAFNWSLPVDAR--TINGMLLEELEEIPQAHIHVRLGNYQIEVLDVQE 408
Query: 432 ARIKRLKAVKQDQGEN 447
IKR+K E+
Sbjct: 409 NMIKRVKITPMTSAEH 424
>dbj|BAA16497.1| (D90888) similar to [SwissProt Accession Number P37908]
[Escherichia coli]
Length = 413
Score = 132 bits (333), Expect = 6e-30
Identities = 102/421 (24%), Positives = 202/421 (47%), Gaps = 27/421 (6%)
Query: 24 LVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSL 83
+V+++A+F SE ++ + + RL + K GN +AK K+ ++ D +S +G L ++
Sbjct: 1 MVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNI 60
Query: 84 ALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIA 143
L +AL + +R V IA +TF+ +V E++PK++A
Sbjct: 61 ------------LASALGTIVGMR----LYGDAGVAIATGVLTFVVLVFAEVLPKTIAAL 104
Query: 144 KSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEEELKIIVG 202
EK ++ L ++ P+V L + I ++ MGI G+ S+EEL+ IV
Sbjct: 105 YPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVH 164
Query: 203 ESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTR 262
ES + I +++ + D + +IM PR +++ +D + ++ + + R
Sbjct: 165 ESRSQ--ISRRNQDMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGR 222
Query: 263 YPYCKGSKDNIIGMVHIRD----LLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKM 318
+ S D+ I M+ +R+ + + FT + + ++ VPE +S L+K
Sbjct: 223 IVLYRDSLDDAISMLRVREAWRLMSEKKEFTKET--MLRAADEIYFVPEGTPLSTQLVKF 280
Query: 319 KKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYD-LKQEGINKLEEGVFELEGML 377
++ + LV++EYG GL+T+EDI+EEI+G+ + E + +G ++G
Sbjct: 281 QRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTA 340
Query: 378 DLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRL 437
++ + +A + ++ + T+ G + LE +P+ G + Y ++L V IK++
Sbjct: 341 NVREINKAFNWHLPED-DARTVNGVILEALEEIPVAGTRVRIGEYDIDILDVQDNMIKQV 399
Query: 438 K 438
K
Sbjct: 400 K 400
>ref|NP_279557.1| (NC_002607) Vng0505c [Halobacterium sp. NRC-1]
gb|AAG19037.1| (AE005003) Vng0505c [Halobacterium sp. NRC-1]
Length = 366
Score = 132 bits (332), Expect = 8e-30
Identities = 102/356 (28%), Positives = 168/356 (46%), Gaps = 23/356 (6%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQ 75
L + L+ N FFV +EFAL +VR+ +E + + A +M+ RL+ YL+ Q
Sbjct: 12 LRIFGGIALLAGNGFFVATEFALTRVRQ--FDESAFQETAGLRRAWEMTDRLEIYLTGCQ 69
Query: 76 LGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEI 135
LGIT+ S+ LG V EPA+A L +FE + I ++SV++A + H+VL E
Sbjct: 70 LGITVCSVGLGVVAEPALAVLFTPVFEFVGFGAGS--IATLSVLVALAVMNVAHLVLAEQ 127
Query: 136 VPKSLAIAKSEKATLFAARPLHVFWV-VFYPVVRLFDVIAHFFLKKMGINPKE------- 187
P L + +++ + A PLH +W P++R D IA L +G+
Sbjct: 128 APTYLGVERAKTVAHYCA-PLHYWWTRTMSPIIRAGDRIAKAILSLVGVEMTRSWTEEGA 186
Query: 188 HDGTHSEEELKIIVGESLR-EGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEEN 246
D +L+ +G+ L G+ D E+I A D + P ++V + +
Sbjct: 187 EDPIDGRSDLRSRMGDLLSGTGVPDERREEVI-GALDIDRIPVGDEAVPVDEVVAVSTTD 245
Query: 247 SYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHI----RDLLSRSIFTPKMHDFNQIVRKM 302
E N+D + RYP S D+ G+V++ RDL T + D +
Sbjct: 246 DLETNLDRMADSPHVRYPLVGESMDDFRGVVYLPEAFRDLDDLRDGTLALED---VAHPP 302
Query: 303 IIVPESASISQILIKMKKEQIHTALVID-EYGGTAGLLTMEDIIEEIMGEISDEYD 357
++ S+S + + + E+ A V D + GG G++T+ D++E I GE+ D YD
Sbjct: 303 LVFDADMSVSDAIDRFQAERQELAFVTDADTGGVVGMVTITDVLEAITGEVEDPYD 358
>ref|NP_213066.1| (NC_000918) hemolysin [Aquifex aeolicus]
pir||H70309 hemolysin - Aquifex aeolicus
gb|AAC06463.1| (AE000673) hemolysin [Aquifex aeolicus]
Length = 416
Score = 130 bits (326), Expect = 4e-29
Identities = 107/426 (25%), Positives = 198/426 (46%), Gaps = 28/426 (6%)
Query: 13 ESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLS 72
E I L+ F ++L FF SE ALV K L+ + K + Y++
Sbjct: 2 ELIGFLIGVFFFIILEGFFAGSEIALVNADKGFLKAVYK--KKKYSFLKHFLDSPEEYIT 59
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
T LG T+S + A L LF M+L + I V++A + F ++L
Sbjct: 60 LTMLGYTVSIV---------FASALYTLF-LMNLSKYVPEIKGKEVLLAETLVIFT-IIL 108
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTH 192
GEI+PKSL ++K + + L +V P + L ++ F + K
Sbjct: 109 GEIIPKSLFQHYADKVVIPSLYILDKLRIVLKPFLVLAKAVSRFISSRFA---KGESKVR 165
Query: 193 SEEELKII-VGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
E+ +K++ +S E + G +I N F + EI+ P ++V + + + +
Sbjct: 166 REDIIKLLREKKSFSESL-----GYVISNILSFKERRIGEIVRPLYEVVMIPDTATVLQA 220
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
I+ + K + R P + D+IIG V DL+ + + P +R+++I E +
Sbjct: 221 IEQIKKSGYARIPVYRKRVDDIIGYVSAYDLIDKPLDEP----IKSFIRRILIFSEFTPL 276
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVF 371
++L K+++ H ALV+DE G G++T+EDI EI+G+ E ++ + ++ + +
Sbjct: 277 PKVLEVFKEKKEHIALVVDERGVILGIVTLEDIFREILGDFISEKG-EEPLVREVSKDTW 335
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDG 431
+G +++ + I + TL G++ L R+P +GD + GY+F+V+ D
Sbjct: 336 VADGKVEINELRRITGINI-PDGPYNTLSGFIAYQLGRIPKKGDVVSYDGYNFKVVDGDT 394
Query: 432 ARIKRL 437
R++++
Sbjct: 395 RRVRKV 400
>ref|NP_104648.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB50434.1| (AP003002) hypothetical protein [Mesorhizobium loti]
Length = 294
Score = 130 bits (326), Expect = 4e-29
Identities = 80/251 (31%), Positives = 134/251 (52%), Gaps = 8/251 (3%)
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
S++EL+ V + R+G + + + I D + +IM R +M ++ +N+ E +
Sbjct: 42 SQDELRGAVDDFRRDGQVVREDRDRIGGLFDLEELEVSDIMVHRTNMRSVNADNAPEAVV 101
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI-----VRKMIIVPE 307
+L+ TR P KGS DNI+G++H +DLL +DF++I K VP+
Sbjct: 102 REILQSPHTRMPLWKGSLDNIVGVLHAKDLLRA--LNEVGNDFSKIDVMKIASKPWFVPD 159
Query: 308 SASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLE 367
+ ++ + L + + H A+V+DEYG GL+T+EDIIEEI+GEI+DE+D+ +G+ +
Sbjct: 160 TTTLQEQLNAFLRRKAHFAVVVDEYGEVEGLVTLEDIIEEIVGEIADEHDVDIQGVKQEA 219
Query: 368 EGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVL 427
+G ++G + + + AL E E T+ G V + +P E HG F V+
Sbjct: 220 DGSVVVDGNVPIRDLNRALDWNLPDE-EATTIAGLVIHEAQSIPDEKQAFTFHGKRFIVM 278
Query: 428 SVDGARIKRLK 438
D RI RL+
Sbjct: 279 KRDKNRIARLR 289
>ref|NP_484353.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB72267.1| (AP003582) ORF_ID:alr0309~hypothetical protein [Nostoc sp. PCC
7120]
Length = 350
Score = 129 bits (325), Expect = 5e-29
Identities = 94/345 (27%), Positives = 166/345 (47%), Gaps = 30/345 (8%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLAL----KMSQRLDTYLS 72
++ F+++L +A E AL V R+ +L + N +A L KM++ + T +
Sbjct: 4 LITTIFVVILGSALCSSIETALFSVSTLRVRQLAQSNNPSAVALLAIREKMNRPIATIVI 63
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
+ + S+ G V A+ +F ++ +TFL ++
Sbjct: 64 LNNIFNIIGSIVTGGVATQALGSQWLGIFSAV--------------------LTFLIIIF 103
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTH 192
GEI+PK+L E +L AA P+ +VF P+V + + + F K + T
Sbjct: 104 GEIIPKTLGERYCEPISLLAAIPITGLSIVFTPLVWILENVTAPFSKG------KKRPTT 157
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
+E E+K++ +EGII+S E E+I+ +D A ++MTPR + ++ + E
Sbjct: 158 NEAEIKLLANIGQQEGIIESDEAEMIQRVFKLNDVVAADLMTPRIMVTHINGNWTIAEAQ 217
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASIS 312
++ TR S D +IG ++LL+ + + + ++VRK+ VPE
Sbjct: 218 SEIIASQHTRIIVTDNSIDQVIGFSLKQELLTAIVEGNQNYQVAKLVRKVRFVPEVIHAD 277
Query: 313 QILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYD 357
++L + + H A+V+DEYG AG++T+ED++E I GEI DE D
Sbjct: 278 RLLKNFIEAREHLAVVVDEYGSVAGVVTLEDVLELITGEIVDETD 322
>ref|NP_252672.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||A83148 conserved hypothetical protein PA3983 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG07370.1|AE004816_6 (AE004816) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 279
Score = 129 bits (324), Expect = 7e-29
Identities = 71/248 (28%), Positives = 138/248 (55%), Gaps = 3/248 (1%)
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
+ +EL ++ ++ ++DS I++ A +D ++IM PR M+ + + +E +
Sbjct: 27 NRQELLELLRDAHDNKLLDSEALSIVEGAIQVADLQVRDIMVPRSQMMSIRSTQTPKEFL 86
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKM-HDFNQIVRKMIIVPESASI 311
+++ +RYP S D+++G++ +DLL + + D +++R VPES +
Sbjct: 87 PAIIEAAHSRYPVVGESLDDVMGVLLAKDLLPLILHNDERPFDIKELLRPATFVPESKRL 146
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEG-INKLEEGV 370
+ +L + + + H A+VIDEYGG AGL+T+ED++E+I+G+I DE+D++++ I L G
Sbjct: 147 NVLLREFRANRNHMAIVIDEYGGVAGLVTIEDVLEQIVGDIEDEHDVEEDSYIKPLPSGD 206
Query: 371 FELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVD 430
F ++ + +++ + EF E E T+GG V S +P + + + F VL+ D
Sbjct: 207 FIVKALTPVDAFNDFFGSEFSDE-EFDTVGGLVMSAFGHLPKRNEVVELGEFRFRVLNAD 265
Query: 431 GARIKRLK 438
R+ L+
Sbjct: 266 SRRVHLLR 273
>ref|NP_224706.1| (NC_000922) CBS Domains (Hemolysin homolog) [Chlamydophila
pneumoniae CWL029]
ref|NP_300565.1| (NC_002491) CBS domains (hemolysin homolog) [Chlamydophila
pneumoniae J138]
ref|NP_444795.1| (NC_002179) hemolysin, putative [Chlamydophila pneumoniae AR39]
pir||D72069 hemolysin, probable CP0244 [imported] - Chlamydophila pneumoniae
(strains CWL029 and AR39)
gb|AAD18650.1| (AE001636) CBS Domains (Hemolysin homolog) [Chlamydophila
pneumoniae CWL029]
gb|AAF38108.1| (AE002185) hemolysin, putative [Chlamydophila pneumoniae AR39]
dbj|BAA98716.1| (AP002546) CBS domains (hemolysin homolog) [Chlamydophila
pneumoniae J138]
Length = 387
Score = 126 bits (316), Expect = 6e-28
Identities = 68/231 (29%), Positives = 128/231 (54%), Gaps = 7/231 (3%)
Query: 212 SVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKD 271
S + ++ + F + +E+M P+ D+ L EE + +E + +V + ++R P K + D
Sbjct: 149 SFQSQLSEALSAFDNLIVREVMIPKVDIFALPEETTLQEALVLVSEEGYSRVPVYKKNLD 208
Query: 272 NIIGMVHIRDLLSRSIFTPKMHDFNQ----IVRKMIIVPESASISQILIKMKKEQIHTAL 327
NI G++ ++DLL + HD +Q + + PE S +L + +++ H A+
Sbjct: 209 NITGILLVKDLL---LLYTSSHDLSQPISSVAKPPFYAPEIKKASSLLQEFRQKHRHLAI 265
Query: 328 VIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALH 387
+++EYG T G+ TMEDIIEEI+GEI+DE+D+++ K + ++G +++ EE +
Sbjct: 266 IVNEYGFTEGIATMEDIIEEIIGEIADEHDVQENTPYKKIGSSWIVDGRMNISDAEEYFN 325
Query: 388 IEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
++ D E TLGG+VF + +P +G I + E+++ + +LK
Sbjct: 326 LKIDHENSYDTLGGHVFHKVGAVPQKGMRIHHENFDIEIITCTERNVGKLK 376
>ref|NP_418873.1| (NC_002696) CBS domain protein [Caulobacter crescentus CB15]
gb|AAK22041.1| (AE005679) CBS domain protein [Caulobacter crescentus CB15]
Length = 308
Score = 124 bits (312), Expect = 2e-27
Identities = 73/233 (31%), Positives = 127/233 (54%), Gaps = 10/233 (4%)
Query: 216 EIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIG 275
+++ A F ++MTPR D+V ++ +E + +R P + + D+ +G
Sbjct: 53 DLVDQAEAFQSLRVADVMTPRADIVAVELSTPFEAVAAQFAEAEHSRMPIYRETLDDPVG 112
Query: 276 MVHIRD---LLSRSIFTPKMHDF--NQIVRKMIIVPESASISQILIKMKKEQIHTALVID 330
++H++D LL+ P D N++ R + VP S + +L++M+ +IH ALVID
Sbjct: 113 VIHVKDVFRLLADEAKRPAPSDLILNKLRRDALYVPASMKAADLLLRMRTSRIHMALVID 172
Query: 331 EYGGTAGLLTMEDIIEEIMGEISDEY-DLKQEGINKLEEGVFELEGMLDLESVEEALHIE 389
E+GGT GL++MED+IE ++GEI DE+ D + G+F+ + LE +E AL +
Sbjct: 173 EFGGTDGLVSMEDLIEAVVGEIDDEHDDATAVAVVARPGGIFDADARAPLEELEAALSHD 232
Query: 390 F---DKECEQVTLGGYVFSLLERMPMEGDTIV-SHGYSFEVLSVDGARIKRLK 438
D + + T+ G V +L R+P G+ I G+ FEV+ D R++R++
Sbjct: 233 LAPPDMDEDIDTVAGLVVALAGRVPQRGEVIAHPDGFEFEVVEADPRRVRRVR 285
>ref|NP_384514.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC41845.1| (AL591783) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 387
Score = 124 bits (311), Expect = 2e-27
Identities = 86/302 (28%), Positives = 154/302 (50%), Gaps = 56/302 (18%)
Query: 197 LKIIVGESLREGIIDSV-------------EGEIIKNAXDFSDTSAKEIMTPRKDMVCLD 243
L+ + SLRE + D++ E ++ N F + +++M PR D+ +D
Sbjct: 49 LRGVSPSSLREDLADALMTDADGNAAFSPEERAMLNNILRFREVRVEDVMVPRADIEAVD 108
Query: 244 EENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLS------------------- 284
+ + E + + + +R P D+ GMVHIRDLL+
Sbjct: 109 QNITIGELMVLFEESGRSRMPVYSEGLDDPRGMVHIRDLLAYVTKQARNRRRNGKAQGAT 168
Query: 285 --------------RSIFTPKMHDFNQ------IVRKMIIVPESASISQILIKMKKEQIH 324
++ F D ++ IVR+++ VP S S ++ +M+ +I
Sbjct: 169 TTNGDKPERAPRQQKAGFDLSRVDLDKTVEEAGIVRQLLFVPPSMLASDLMQRMQAARIQ 228
Query: 325 TALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEE 384
ALVIDEYGGT GL+++EDI+E ++G+I DE+D ++ + + VF + ++LE + E
Sbjct: 229 MALVIDEYGGTDGLVSLEDIVEMVVGDIEDEHDDEEVMFARSSDDVFIADARVELEEIAE 288
Query: 385 ALHIEFD--KECEQV-TLGGYVFSLLERMPMEGDTIVS-HGYSFEVLSVDGARIKRLKAV 440
A+ +FD ++ E V TLGG VF+ L R+P+ G+ + + G+ F++L D R+KR++ +
Sbjct: 289 AVGPDFDVREQLEDVDTLGGLVFASLGRIPVRGEVVQAIPGFEFQILDADPRRVKRVRIM 348
Query: 441 KQ 442
++
Sbjct: 349 RK 350
>ref|NP_297080.1| (NC_002620) hemolysin, putative [Chlamydia muridarum]
pir||C81674 hemolysin, probable TC0706 [imported] - Chlamydia muridarum
(strain Nigg)
gb|AAF39520.1| (AE002339) hemolysin, putative [Chlamydia muridarum]
Length = 374
Score = 124 bits (311), Expect = 2e-27
Identities = 70/224 (31%), Positives = 120/224 (53%), Gaps = 1/224 (0%)
Query: 216 EIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIG 275
E+ N D A+EIMTP+ D+ L E + +++ ++R P + D+I G
Sbjct: 136 ELSANISCLEDMIAREIMTPKADIFALPSEIPISQAFPLIIDEGYSRVPLFTKNIDDITG 195
Query: 276 MVHIRDLLSRSIFTPKM-HDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGG 334
MV ++DLL P + I + PE +S +L + ++++ H A+V++EYG
Sbjct: 196 MVLVKDLLPVYYKDPHTTQPLSSIAYPPLYTPEIRRVSLLLQEFRQKRCHLAIVVNEYGF 255
Query: 335 TAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKEC 394
T GL++MEDI+EEI GEI+DEYD +++ K + ++G +++ EE + E
Sbjct: 256 TEGLVSMEDIVEEIFGEIADEYDDQEDVHYKKVGNAWIVDGRMNISDAEEYFGLRIAHES 315
Query: 395 EQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
TLGGYVF L +P +G I ++ ++LS ++++K
Sbjct: 316 SYDTLGGYVFHKLGAVPEKGMKIYYEDFAIDILSCSDRSVEKMK 359
>ref|NP_531065.1| (NC_003304) hemolysin [Agrobacterium tumefaciens str. C58 (U.
Washington)]
gb|AAL41381.1| (AE009007) hemolysin [Agrobacterium tumefaciens str. C58 (U.
Washington)]
Length = 380
Score = 124 bits (310), Expect = 3e-27
Identities = 92/304 (30%), Positives = 146/304 (47%), Gaps = 52/304 (17%)
Query: 197 LKIIVGESLREGIIDSV-------------EGEIIKNAXDFSDTSAKEIMTPRKDMVCLD 243
LK GE LRE + D++ E ++ N F + ++IM PR D+ LD
Sbjct: 48 LKPSQGERLREDLTDALMADTEIGAAFSPEERAMLNNILRFREVRVEDIMIPRVDIDGLD 107
Query: 244 EENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLL--------------SRSI-- 287
+ + E + + + +R P + DN GM+HIRDLL SRS+
Sbjct: 108 QNMTIGEALILFEETGRSRMPVYDETLDNPKGMIHIRDLLAYVAKQARNKRRAGSRSVAY 167
Query: 288 -------------FTPKMHDFNQ------IVRKMIIVPESASISQILIKMKKEQIHTALV 328
F D Q +VRK++ P S S +L M+ ++ ALV
Sbjct: 168 GEVKATTRSPRPNFDLARVDLEQTVADAGLVRKILFAPPSMLASDLLKTMQAQRTQLALV 227
Query: 329 IDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHI 388
IDEYGGT GL++ EDI+E ++G+I DE+D + ++L V + +L + E +
Sbjct: 228 IDEYGGTDGLVSHEDIVEMVVGDIDDEHDKDEAMFSRLSADVLVADARAELTELAEVIGP 287
Query: 389 EFD--KECEQV-TLGGYVFSLLERMPMEGDTI-VSHGYSFEVLSVDGARIKRLKAVKQDQ 444
EFD + E++ TLGG +F L R+P +G+ + G+ F++L D RIK ++ V+
Sbjct: 288 EFDVREHLEEIDTLGGLIFFALGRIPAKGEVVRAVPGFEFQILDADSRRIKGVRIVRDHG 347
Query: 445 GENE 448
E +
Sbjct: 348 SEGQ 351
>ref|NP_353391.1| (NC_003062) AGR_C_627p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK86176.1| (AE007973) AGR_C_627p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 384
Score = 124 bits (310), Expect = 3e-27
Identities = 92/304 (30%), Positives = 146/304 (47%), Gaps = 52/304 (17%)
Query: 197 LKIIVGESLREGIIDSV-------------EGEIIKNAXDFSDTSAKEIMTPRKDMVCLD 243
LK GE LRE + D++ E ++ N F + ++IM PR D+ LD
Sbjct: 52 LKPSQGERLREDLTDALMADTEIGAAFSPEERAMLNNILRFREVRVEDIMIPRVDIDGLD 111
Query: 244 EENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLL--------------SRSI-- 287
+ + E + + + +R P + DN GM+HIRDLL SRS+
Sbjct: 112 QNMTIGEALILFEETGRSRMPVYDETLDNPKGMIHIRDLLAYVAKQARNKRRAGSRSVAY 171
Query: 288 -------------FTPKMHDFNQ------IVRKMIIVPESASISQILIKMKKEQIHTALV 328
F D Q +VRK++ P S S +L M+ ++ ALV
Sbjct: 172 GEVKATTRSPRPNFDLARVDLEQTVADAGLVRKILFAPPSMLASDLLKTMQAQRTQLALV 231
Query: 329 IDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHI 388
IDEYGGT GL++ EDI+E ++G+I DE+D + ++L V + +L + E +
Sbjct: 232 IDEYGGTDGLVSHEDIVEMVVGDIDDEHDKDEAMFSRLSADVLVADARAELTELAEVIGP 291
Query: 389 EFD--KECEQV-TLGGYVFSLLERMPMEGDTI-VSHGYSFEVLSVDGARIKRLKAVKQDQ 444
EFD + E++ TLGG +F L R+P +G+ + G+ F++L D RIK ++ V+
Sbjct: 292 EFDVREHLEEIDTLGGLIFFALGRIPAKGEVVRAVPGFEFQILDADSRRIKGVRIVRDHG 351
Query: 445 GENE 448
E +
Sbjct: 352 SEGQ 355
>ref|NP_218467.1| (NC_000919) hemolysin, putative [Treponema pallidum]
pir||E71374 probable hemolysin - syphilis spirochete
gb|AAC65023.1| (AE001188) hemolysin, putative [Treponema pallidum]
Length = 407
Score = 124 bits (310), Expect = 3e-27
Identities = 106/419 (25%), Positives = 194/419 (46%), Gaps = 23/419 (5%)
Query: 26 LLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSLAL 85
+L+ F +E A + RL L + ++ A++A+++ +R + YL+A +G TL+S AL
Sbjct: 1 MLSMLFSAAETAFCALNTLRLRYLYEKRHARARVAMRILRRKNFYLAAVVIGNTLASSAL 60
Query: 86 GWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIAKS 145
V IA ALF IH++ I + T L ++ GEI+PKSLA+ +
Sbjct: 61 SAV----IALFARALFG----------IHAVGWSIG--AGTVLTLLFGEIIPKSLALCRP 104
Query: 146 EKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIVGESL 205
L AR L ++ P V++F + L+ + ++++L ++
Sbjct: 105 NAVALHTARFLQWSALMLTPFVQVFCMARSALLRLARVACHTPSLRVTDDDLHTVLYAGE 164
Query: 206 REGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPY 265
+G + S E + + + +A++IMT R ++ + +S E I K +R P
Sbjct: 165 ADGTVTSRERALYQRILHSASLTARDIMTCRAQLIAVPRASSLAEAIACAQKMRVSRVPV 224
Query: 266 CKGSKDNIIGMVHIRDLL-SRSIFTPKMHDFNQIVRKM---IIVPESASISQILIKMKKE 321
+ S D IIG+ ++ L S + + + +++ + + V E ++ + K++
Sbjct: 225 YERSVDWIIGIFDVKKFLCSEEVDGRDLEECGTLMQHVSAPVFVFECTRLAYVQHKLRAH 284
Query: 322 QIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGV--FELEGMLDL 379
A+V+DEYGGTAGL+T +I + + E+ + G GV + G L L
Sbjct: 285 SRAVAIVLDEYGGTAGLVTKHNIYQAFFKSSAHEFPVNSTGPQVTRAGVRAYIFPGSLRL 344
Query: 380 ESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
+ + + L +F C TL G + +P G T+V + VL + RI R++
Sbjct: 345 DEINDLLGTDF-SSCTSETLAGLIMEYTGCIPDPGTTVVFGSWRCVVLQLHVRRIVRVR 402
>dbj|BAA12353.1| (D84432) YrkA [Bacillus subtilis]
Length = 217
Score = 123 bits (309), Expect = 4e-27
Identities = 76/211 (36%), Positives = 120/211 (56%), Gaps = 7/211 (3%)
Query: 239 MVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKM--HDFN 296
+V + E+SYE + I+ +TRYP G KD+IIG ++ ++ LS I T + DF
Sbjct: 9 IVAISSEDSYETIVKIIKTESYTRYPVLNGDKDSIIGFINAKEFLSAYIDTDQKIKEDFK 68
Query: 297 --QIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISD 354
+ +I V ES I +L+KM+KE+ H A+++DEYGGT+GL+T EDI+EEI+GEI D
Sbjct: 69 LENHINPVIHVIESVPIHDVLVKMQKERTHIAILVDEYGGTSGLVTAEDILEEIVGEIRD 128
Query: 355 EYDLKQ-EGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPME 413
E+D + I K+ + + L+ + +E V + L + E T+GG+ F +
Sbjct: 129 EFDKDEVPNIRKVNDNHYILDSKVLIEDVNDLLGTTLASD-EVDTIGGW-FMTQQIDAAV 186
Query: 414 GDTIVSHGYSFEVLSVDGARIKRLKAVKQDQ 444
G I + GY F+V G I L+ V++ +
Sbjct: 187 GSVIEADGYIFKVHETVGRHINYLEIVRKKE 217
>gb|AAM75363.1|AF521648_3 (AF521648) hemolysin-like protein [Pseudomonas syringae]
Length = 287
Score = 123 bits (308), Expect = 5e-27
Identities = 77/193 (39%), Positives = 112/193 (57%), Gaps = 7/193 (3%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRK---TRLEELVKIGNSNAKLALKMSQRLDTYLSA 73
M++ A +LVLLN FFV +EFA+VK+R +R V + + T+L A
Sbjct: 18 MILFALVLVLLNGFFVAAEFAMVKLRSDPGSRPSRTVNGWRGQILRTVHNQAPMLTFLPA 77
Query: 74 TQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLG 133
+ GITL+SL LGWVGEPA A +L + +M + E+P I +S AF I++LH+V+G
Sbjct: 78 SW-GITLASLGLGWVGEPAFAHILEPVLGAMGV-ESPEVIKGVSFFAAFFIISYLHIVVG 135
Query: 134 EIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINP--KEHDGT 191
E+ PKS AI K E +L+ A PL++F+ YP + L + A+ L+ G HD
Sbjct: 136 ELAPKSWAIRKPETLSLWTAVPLYLFYWAMYPAIYLLNASANAILRIAGQGEPGAHHDHA 195
Query: 192 HSEEELKIIVGES 204
+S EELK+I+ S
Sbjct: 196 YSREELKLILHSS 208
>ref|NP_360778.1| (NC_003103) hemolysin C [Rickettsia conorii]
gb|AAL03679.1| (AE008663) hemolysin C [Rickettsia conorii]
Length = 299
Score = 123 bits (308), Expect = 5e-27
Identities = 89/285 (31%), Positives = 148/285 (51%), Gaps = 22/285 (7%)
Query: 162 VFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNA 221
+ + V +LF I +FF K P G + LKI + ++ +D E I+ N
Sbjct: 19 LIFTVRKLFSPIKNFFRKTK--TPDNFFGVI--KRLKI----NSQKMTLD--ERNILANL 68
Query: 222 XDFSDTSAKEIMTPRKDMVCLDEENSYEE-NIDIVLKGHFTRYPYCKGSKDNIIGMVHIR 280
+ D + ++IM PR D+ + + EE + I L+ TR G+ DN++G +HI+
Sbjct: 69 LELEDKTIEDIMVPRSDIAAIKLTTNLEELSESIKLEVPHTRTLIYDGTLDNVVGFIHIK 128
Query: 281 DLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLT 340
DL +++ T + +++RK II S + +L KM++E+ H A+V+DEYGGT GL+T
Sbjct: 129 DLF-KALATKQNGRLKKLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVVDEYGGTDGLVT 187
Query: 341 MEDIIEEIMGEISDEYD--LKQEGINKLEEGVFELEGMLDLESVE----EALHIEFDKEC 394
+ED+IEEI+G I DE+D L + + +++E +E E LH ++D
Sbjct: 188 IEDLIEEIVGRIDDEHDQQLDSDNFKVINNSTIIANARVEVEVLEEIIGEKLHNDYD--- 244
Query: 395 EQVTLGGYVFSLLERMPMEGDTI-VSHGYSFEVLSVDGARIKRLK 438
E T+GG V + + +P G I +S EV +K++K
Sbjct: 245 EFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATPRSLKQVK 289
>ref|NP_298191.1| (NC_002488) polar amino acid transporter [Xylella fastidiosa 9a5c]
pir||A82747 polar amino acid transporter XF0901 [imported] - Xylella fastidiosa
(strain 9a5c)
gb|AAF83711.1|AE003930_1 (AE003930) polar amino acid transporter [Xylella fastidiosa 9a5c]
Length = 323
Score = 122 bits (307), Expect = 7e-27
Identities = 65/246 (26%), Positives = 136/246 (54%), Gaps = 4/246 (1%)
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
H+ ++L +I+ + G+I + +++ A +D + ++M PR MV L E+ +
Sbjct: 63 HTLDDLLVILRSAEHHGLIATDTLRMMEGAIAIADLTVGDVMVPRSQMVSLPVESDLQTI 122
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
+++ +R+P +KD ++G++ +DLL + + ++++R + ++PES +
Sbjct: 123 TKQMVESGHSRFPVHGENKDEVLGILLAKDLLRGVSANHTITNVHELLRPVGMIPESKKL 182
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL---EE 368
+ +L + + H A+V+DEYGG AGL+T+ED++E+I+G+I DE+D ++ N + +
Sbjct: 183 NVLLKEFRLSHNHMAIVVDEYGGVAGLVTIEDVLEQIVGDIDDEHDETEDQTNMIAIQAD 242
Query: 369 GVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLS 428
G + ++ + +E E + EF + + T+GG V + +P GD + ++F V
Sbjct: 243 GCYIVDALTPIEDFNERFNAEFPDD-DYDTIGGLVTEAIGHLPETGDELTIGRFAFRVAK 301
Query: 429 VDGARI 434
+ RI
Sbjct: 302 ANARRI 307
>ref|NP_252437.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||H83178 conserved hypothetical protein PA3748 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG07135.1|AE004793_12 (AE004793) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 430
Score = 122 bits (306), Expect = 9e-27
Identities = 102/421 (24%), Positives = 198/421 (46%), Gaps = 25/421 (5%)
Query: 23 LLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSS 82
LLV +AFF E AL+ + + RL K G A+ + + D G TL +
Sbjct: 15 LLVACSAFFSCVETALLNLDRYRLRLQAKQGLRGARRSSWLLLHDDRLRGTLLFGRTLVN 74
Query: 83 LALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAI 142
++ AAL LR + + + +A +T L ++ G ++P+
Sbjct: 75 VSA------------AALASWAALRHWGV----IGLAVAIPGMTLLLLLFGALLPRRYGA 118
Query: 143 AKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGT-HSEEELKIIV 201
+SE+ L + PL + + +P++ L ++++ L+ +G+ E D + S +E +
Sbjct: 119 LRSERVALPLSLPLLILQRLCWPLLWLLTLLSNALLRLLGVAAAEQDDSGRSRDEEALHP 178
Query: 202 GESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFT 261
++ + ++ +++ D + ++M PR ++ +D ++ E ++ + T
Sbjct: 179 ADNPQASEVN--RHDMLLGLLDLEKVTVNDLMIPRNEIEGIDLDDELEVIVEQLRTTSHT 236
Query: 262 RYPYCKGSKDNIIGMVHIRD---LLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKM 318
R P + + I G+VH+R LL++ T + + Q + VPES +S L+
Sbjct: 237 RLPVYRDDVNQIEGVVHMRQIARLLTQGRLTKE--NLRQACMEPYFVPESTPLSTQLVNF 294
Query: 319 KKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLD 378
+KE+ +V+DEYG G++T+EDI+EEI+G+ +D L I E+G F ++G +
Sbjct: 295 QKEKRRIGVVVDEYGEVIGIVTLEDILEEIVGDFNDLDSLDNPDIQAQEDGSFVIDGSAN 354
Query: 379 LESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
L + ++L + + + TL G V LE++P + Y E+ R+K ++
Sbjct: 355 LRELNKSLGWQLPCDGPK-TLNGLVTEALEQIPDCAVCLRIGPYCLEIQQSAENRVKSVR 413
Query: 439 A 439
A
Sbjct: 414 A 414
>ref|NP_219935.1| (NC_000117) (CBS Domain) [Chlamydia trachomatis]
pir||G71515 probable (cbs domain) - Chlamydia trachomatis (serotype D, strain
UW3/Cx)
gb|AAC68020.1| (AE001316) (CBS Domain) [Chlamydia trachomatis]
Length = 369
Score = 122 bits (306), Expect = 9e-27
Identities = 69/224 (30%), Positives = 119/224 (52%), Gaps = 1/224 (0%)
Query: 216 EIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIG 275
E+ N A+EIMTP+ D+ L + + +++ ++R P S D+I G
Sbjct: 136 ELSTNISCLDHMIAREIMTPKADIFALQGDTPISQAFPLIIDEGYSRIPLFTKSIDDITG 195
Query: 276 MVHIRDLLSRSIFTPKMHD-FNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGG 334
MV ++DL P + I + PE S +L + ++++ H A+V++EYG
Sbjct: 196 MVLVKDLSPVYYKDPHTSQPLSSIAYPPLYTPEIRRASLLLQEFRQKRCHLAIVVNEYGF 255
Query: 335 TAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKEC 394
T GL++MEDIIEEI GEI+DEYD +++ +K + ++G +++ EE + + E
Sbjct: 256 TEGLVSMEDIIEEIFGEIADEYDNQEDVHHKKIGNAWIVDGRMNISDAEECFGLHIEHES 315
Query: 395 EQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
TLGGYVF L +P +G I ++ ++LS ++++K
Sbjct: 316 SYDTLGGYVFHKLGAVPEKGMKIYYEDFAIDILSCSDRSVEKMK 359
>gb|AAC62436.1| (U97482) hemolysin [Rickettsia typhi]
Length = 303
Score = 122 bits (306), Expect = 9e-27
Identities = 72/230 (31%), Positives = 126/230 (54%), Gaps = 6/230 (2%)
Query: 214 EGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEE-NIDIVLKGHFTRYPYCKGSKDN 272
E I+ N D + ++IM PR D+V + + EE + I ++ TR G+ DN
Sbjct: 62 ECNILANLLQLEDKTVEDIMVPRSDIVAIKLTTNLEELSESIKIEVPHTRTLIYDGTLDN 121
Query: 273 IIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEY 332
++G +HI+DL +++ T + +++RK II S + +L KM++E+ H A+V+DEY
Sbjct: 122 VVGFIHIKDLF-KALATKQNSPLKRLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVVDEY 180
Query: 333 GGTAGLLTMEDIIEEIMGEISDEYDLKQEGIN--KLEEGVFELEGMLDLESVEEALHIEF 390
GGT GL+T+ED+IEEI+G I DE+D + + N + +++E +EE + +
Sbjct: 181 GGTDGLVTIEDLIEEIVGRIDDEHDQQLDSTNFKVINNSTIIANARIEVELLEEIIGEKI 240
Query: 391 DKECEQV-TLGGYVFSLLERMPMEGDTI-VSHGYSFEVLSVDGARIKRLK 438
+ ++ T+GG V + + +P G I +S EV +K++K
Sbjct: 241 KNDDDEFDTIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATPRSLKQVK 290
>ref|NP_311502.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
dbj|BAB36898.1| (AP002562) hypothetical protein [Escherichia coli O157:H7]
Length = 398
Score = 122 bits (305), Expect = 1e-26
Identities = 97/404 (24%), Positives = 190/404 (47%), Gaps = 27/404 (6%)
Query: 41 VRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSLALGWVGEPAIAKLLAAL 100
+ + RL + K GN +AK K+ ++ D +S +G L ++ L +AL
Sbjct: 3 LNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNI------------LASAL 50
Query: 101 FESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFW 160
+ +R V IA +TF+ +V E++PK++A EK ++ L
Sbjct: 51 GTIVGMR----LYGDAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQ 106
Query: 161 VVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEEELKIIVGESLREGIIDSVEGEIIK 219
++ P+V L + I ++ MGI G+ S+EEL+ IV ES + I +++
Sbjct: 107 ILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQ--ISRRNQDMLL 164
Query: 220 NAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHI 279
+ D + +IM PR +++ +D + ++ + + R + S D+ I M+ +
Sbjct: 165 SVPDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRV 224
Query: 280 RD----LLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGT 335
R+ + + FT + + ++ VPE +S L+K ++ + LV++EYG
Sbjct: 225 REAWRLMSEKKEFTKET--MLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDI 282
Query: 336 AGLLTMEDIIEEIMGEISDEYD-LKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKEC 394
GL+T+EDI+EEI+G+ + E + +G ++G ++ + +A + ++
Sbjct: 283 QGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPED- 341
Query: 395 EQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
+ T+ G + LE +P+ G + Y ++L V IK++K
Sbjct: 342 DARTVNGVILEALEEIPVVGTRVRIGEYDIDILDVQDNMIKQVK 385
>ref|NP_642781.1| (NC_003919) polar amino acid transporter [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37317.1| (AE011883) polar amino acid transporter [Xanthomonas axonopodis pv.
citri str. 306]
Length = 292
Score = 121 bits (304), Expect = 1e-26
Identities = 66/246 (26%), Positives = 136/246 (54%), Gaps = 4/246 (1%)
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
H+ +EL ++ + ++G+I + +++ A S+ + ++M R MV L E + +
Sbjct: 32 HTRDELVALLRTAEQDGLIAADTLRMMEGAISVSELTVGDVMISRSQMVSLPVEARFIDL 91
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
+ V++ +R+P +KD ++G++ +DLL + + +++R +++PES +
Sbjct: 92 MKQVVESGHSRFPVHGENKDEVLGILLAKDLLRGVVADNGPGNVRELLRPAVLIPESKKL 151
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL---EE 368
+ +L + + + H A+V+DEYGG AGL+T+ED++E+I+GEI DE+D +E + + +
Sbjct: 152 NVLLKEFRLSRNHMAIVVDEYGGVAGLVTIEDVLEQIVGEIDDEHDDAEEENSLIAIQAD 211
Query: 369 GVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLS 428
G + ++ + +E E EF + E T+GG V + +P G+ + ++F V
Sbjct: 212 GRYVVDALTPIEDFNERFGAEFPDD-EYDTVGGLVTDAIGHLPETGEELTLGRFAFRVAK 270
Query: 429 VDGARI 434
D R+
Sbjct: 271 ADARRV 276
>gb|EAA02505.1| (AAAB01004957) ebiP48 [Anopheles gambiae str. PEST]
Length = 358
Score = 121 bits (304), Expect = 1e-26
Identities = 84/324 (25%), Positives = 159/324 (48%), Gaps = 10/324 (3%)
Query: 116 MSVVIAFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAH 175
+ V IA +T + +V GE+ PK+LA EK A+ L V P+V L + I
Sbjct: 35 LGVAIATFGLTLIVLVFGEVTPKTLAAMFPEKIAYPASWVLKGLMVPLSPLVWLINGITS 94
Query: 176 FFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTP 235
LK + +NP + D ++EE L+ IV E+ +I E++ + D + + IM P
Sbjct: 95 GLLKLLRLNPSKDDALNTEE-LRTIVNEA--GSLIPQRHQEMLLSILDLDKMTVEHIMVP 151
Query: 236 RKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRD---LLSRSIFTPKM 292
R ++ +D + ++ + + T+ + + D+++G +H RD L++R F
Sbjct: 152 RSEIYAIDINDDWKTILRQLAHCAHTKILLYRDNIDDVVGFLHARDALRLMARDQFNKS- 210
Query: 293 HDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEI 352
+ V ++ +PE ++ L K ++ + L++DEYG GL+T++DI+EEI+G+
Sbjct: 211 -SLLREVDEIYFIPEGTPLNVQLAKFQRNKERIGLIVDEYGDIQGLITLDDILEEIVGDF 269
Query: 353 SDEY-DLKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMP 411
+ + I+ +G F +EG + + + + + + + TL G + LE +P
Sbjct: 270 TTSMTPAPSDEIHPQPDGSFLVEGSASIRELNKEMSWQLPIDGPR-TLNGAILEYLEEIP 328
Query: 412 MEGDTIVSHGYSFEVLSVDGARIK 435
++ GY E+L V+ +K
Sbjct: 329 QPNISLRLAGYPIEILEVENNMVK 352
>ref|NP_106186.1| (NC_002678) hemolysin [Mesorhizobium loti]
dbj|BAB51972.1| (AP003006) hemolysin [Mesorhizobium loti]
Length = 358
Score = 121 bits (304), Expect = 1e-26
Identities = 81/291 (27%), Positives = 149/291 (50%), Gaps = 30/291 (10%)
Query: 186 KEHDGTHSEEELKIIVGESLREGIIDSV-EGEIIKNAXDFSDTSAKEIMTPRKDMVCLDE 244
++ +GT EE+ + E+ + S E ++ N + +++M PR D+ ++
Sbjct: 56 RQRNGTSLREEIAGALAETASDAESFSPGERAMLNNILRLREVRVEDVMVPRADIEAVEI 115
Query: 245 ENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLS--------------RSIFTP 290
+ + + + +R P + D+ GMVHIRD+L+ R
Sbjct: 116 TTTLGDLLGTFEQSGHSRMPVYSETLDDPRGMVHIRDVLAHITKLARVKKGRTTRKTPVA 175
Query: 291 KMHDFNQI-----------VRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLL 339
D Q+ +R+++ VP S S ++ +M+ + ALVIDEYGGT GL+
Sbjct: 176 TQLDLAQVDLARTIGELNLIRQVLFVPPSMLASDLMGRMQTTRTQMALVIDEYGGTDGLV 235
Query: 340 TMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEF--DKECEQV 397
++EDI+E ++G+I DE+D + I + +GVF ++G +++ V + + +F + E V
Sbjct: 236 SLEDIVEMVVGDIEDEHDDDEPMITQAGDGVFIVDGKAEIDEVAKMIGEDFAAGEHGEYV 295
Query: 398 -TLGGYVFSLLERMPMEGDTIVS-HGYSFEVLSVDGARIKRLKAVKQDQGE 446
T+GG +F+ L R+P G+ + + G+ F VL D R+KR++ V+ +GE
Sbjct: 296 DTIGGMIFNTLGRVPARGEVVQAIPGFEFHVLDADPRRVKRVRIVQSQKGE 346
>ref|NP_221092.1| (NC_000963) HEMOLYSIN C (tlyC) [Rickettsia prowazekii]
sp|O05961|Y740_RICPR Hypothetical protein RP740
pir||H71633 hemolysin C (tlyC) RP740 - Rickettsia prowazekii
emb|CAA72456.1| (Y11778) hemolysin [Rickettsia prowazekii]
emb|CAA15168.1| (AJ235273) HEMOLYSIN C (tlyC) [Rickettsia prowazekii]
Length = 303
Score = 121 bits (304), Expect = 1e-26
Identities = 83/282 (29%), Positives = 142/282 (49%), Gaps = 16/282 (5%)
Query: 162 VFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNA 221
+ + V +LF +I HFF K P G II + + E I+ N
Sbjct: 20 LIFIVRQLFYLIKHFFSKTK--TPDNFFG--------IIKRLKINSQKMSLDEFNILANL 69
Query: 222 XDFSDTSAKEIMTPRKDMVCLDEENSYEE-NIDIVLKGHFTRYPYCKGSKDNIIGMVHIR 280
D ++IM PR D++ + + EE + I + TR G+ DN++G +HI+
Sbjct: 70 LKLEDKIVEDIMVPRSDIIAIKLTTNLEELSESIKIAVPHTRTLIYDGTLDNVVGFIHIK 129
Query: 281 DLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLT 340
DL +++ T + +++RK II S + +L KM++E+ H A+V+DEYGGT GL+T
Sbjct: 130 DLF-KALATKQNSPLKRLIRKHIIAAPSMKLLDLLAKMRRERTHIAIVVDEYGGTDGLVT 188
Query: 341 MEDIIEEIMGEISDEYDLKQEGIN--KLEEGVFELEGMLDLESVEEALHIEFDKECEQV- 397
+ED+IEEI+G I DE+D + + N + +++E +EE + + + ++
Sbjct: 189 IEDLIEEIVGRIDDEHDQQLDSANFKVINNSTIIANARIEVELLEEIIGEKLKNDDDEFD 248
Query: 398 TLGGYVFSLLERMPMEGDTI-VSHGYSFEVLSVDGARIKRLK 438
T+GG V + + +P G I +S EV +K++K
Sbjct: 249 TIGGLVLTRVSSVPAIGTRIDISENIEIEVTDATPRSLKQVK 290
>gb|AAK95613.1|AF401230_3 (AF401230) putative hemolysin [Vibrio vulnificus]
Length = 395
Score = 120 bits (301), Expect = 3e-26
Identities = 96/409 (23%), Positives = 193/409 (46%), Gaps = 33/409 (8%)
Query: 39 VKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSSLALGWVGEPAIAKLLA 98
+ + + RL+ L G+ AK K+ R D + +G L ++ AIA +L
Sbjct: 1 MSLNRYRLKHLANSGHKGAKRVEKLLSRPDRLIGLILIGNNLVNILAS-----AIATILG 55
Query: 99 ALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHV 158
+ V IA ++T + +V E+ PK++A E+ + ++ L V
Sbjct: 56 MRLYG-----------DLGVAIATGALTLVVLVFAEVTPKTVAALYPERVSYASSILLVV 104
Query: 159 FWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTH--SEEELKIIVGESLREGIIDSVEGE 216
+ P+V L + I + F++ +G+ +H+G S EEL+ +V E+ +I +
Sbjct: 105 LMKLLSPLVMLVNFITNGFIRLLGLKA-QHNGEDNLSSEELRTVVNEA--GSLIPQRHQD 161
Query: 217 IIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGM 276
++ + D + +IM PR ++ +D + ++ + + R + D +GM
Sbjct: 162 MLVSILDLEHVTVNDIMIPRNEITGIDINDDWKSIVRQLTHSPHGRIVLYRDKIDEAVGM 221
Query: 277 VHIRDLLSRSIFTPKMHDFNQ-----IVRKMIIVPESASISQILIKMKKEQIHTALVIDE 331
+ +R+ + + ++FN+ ++ +PES ++ L+K ++ + L++DE
Sbjct: 222 LRLREAYRLML---EKNEFNKETLLRAADEVYFIPESTPLNVQLLKFQRNKQRIGLIVDE 278
Query: 332 YGGTAGLLTMEDIIEEIMGEISDEY--DLKQEGINKLEEGVFELEGMLDLESVEEALHIE 389
YG GL+T+EDI+EEI+GE + L E I +G F +EG ++ + + L +
Sbjct: 279 YGDIIGLVTLEDILEEIVGEFTTSIAPSLSDE-ITPQGDGSFLIEGSTNIRDINKGLKWK 337
Query: 390 FDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
+ + TL G + LE +P ++ G++ E++ ++ RIK +K
Sbjct: 338 LPTDGPR-TLNGLILEHLEDIPESHLSVKVAGHAMEIVELEENRIKSVK 385
>ref|NP_637687.1| (NC_003902) polar amino acid transporter [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM41611.1| (AE012341) polar amino acid transporter [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 292
Score = 120 bits (301), Expect = 3e-26
Identities = 65/246 (26%), Positives = 136/246 (54%), Gaps = 4/246 (1%)
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
H+ +EL ++ + ++G+I + +++ A S+ + ++M R MV L E + +
Sbjct: 32 HTRDELVALLRTAEQDGLIAADTLRMMEGAISVSELTVGDVMISRSQMVSLPVEARFLDL 91
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
+ V++ +R+P +KD ++G++ +DLL + + +++R +++PES +
Sbjct: 92 MKQVVESGHSRFPVHGENKDEVLGILLAKDLLRGVVADNGPGNVRELLRPAVLIPESKKL 151
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL---EE 368
+ +L + + + H A+V+DEYGG AGL+T+ED++E+I+GEI DE+D +E + + +
Sbjct: 152 NVLLKEFRLSRNHMAIVVDEYGGVAGLVTIEDVLEQIVGEIDDEHDDAEEENSLIAIQAD 211
Query: 369 GVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLS 428
G + ++ + +E E +F + E T+GG V + +P G+ + ++F V
Sbjct: 212 GRYVVDALTPIEDFNERFGADFPDD-EYDTVGGLVTDAIGHLPETGEELTLGRFAFRVAK 270
Query: 429 VDGARI 434
D R+
Sbjct: 271 ADARRV 276
>ref|NP_072808.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium]
sp|Q49399|Y146_MYCGE Hypothetical protein MG146 (VXpSPT7_orf424)
pir||B64216 hemolysin tlyC homolog - Mycoplasma genitalium
gb|AAC71364.1| (U39695) conserved hypothetical protein [Mycoplasma genitalium]
Length = 424
Score = 118 bits (295), Expect = 2e-25
Identities = 96/367 (26%), Positives = 176/367 (47%), Gaps = 24/367 (6%)
Query: 9 LDPSESILMLMVAFLLVLLNAFF--VLS--EFALVKVRKTRLEELVKIGNSNAKLALKMS 64
+D + S L L V L ++L AF V+S E A+ + R + +K N KL+ K+
Sbjct: 1 MDSAPSGLTLTVIILSIILLAFISTVVSAYETAITSLTPYRWKNYIKTNNKQDKLSTKII 60
Query: 65 QRLDTYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLS 124
+ S+ + I +++ + + ++ +L E E +S V+ +
Sbjct: 61 NHFQNHYSSCLITILITNNIVAIM----VSNILFLALEQTIKNE------LLSSVLNLVV 110
Query: 125 ITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGIN 184
L V EI+PK+L + + A ++ F+++F+P+ +L +I LKK
Sbjct: 111 SGVLIVSFCEILPKTLGRINVIRTLVLFAYLVYFFYLIFWPITKLTSLI----LKKY--- 163
Query: 185 PKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDE 244
E+ S +++ + E + G+ + +IK F K++M K +
Sbjct: 164 --ENPLPVSRKDVYYFIDEIEQNGLFSKEDSLLIKKTLIFDQVLVKKVMIKWKKVAYCYL 221
Query: 245 ENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMII 304
+S L+ F+R P + + I+G +H++D + PK D NQ++ +++
Sbjct: 222 NDSINLIAKQFLQRQFSRMPVVDKTTNKIVGFIHLKDFFTAKEANPKSLDLNQLLYPVVL 281
Query: 305 VPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGIN 364
V +S I Q L +M+ + H A+V D++ T G+++MEDIIEE++GEI DE+D Q I
Sbjct: 282 VQDSTPIKQALRQMRLNRAHLAVVNDKHEKTIGIVSMEDIIEELVGEIYDEHDDIQP-IQ 340
Query: 365 KLEEGVF 371
L+E V+
Sbjct: 341 VLDENVW 347
>ref|NP_540890.1| (NC_003317) CBS domain containing protein [Brucella melitensis]
gb|AAL53154.1| (AE009630) CBS domain containing protein [Brucella melitensis]
Length = 372
Score = 117 bits (294), Expect = 2e-25
Identities = 83/284 (29%), Positives = 143/284 (50%), Gaps = 47/284 (16%)
Query: 204 SLREGIIDSVEGEIIKNAXDFS--------------DTSAKEIMTPRKDMVCLDEENSYE 249
SLRE + D++ ++ FS + +++M PR D+ ++
Sbjct: 52 SLREDLADALSSATSEDGAAFSPEEKAMLHNILRLREIRVEDVMIPRADVEAVEITTPLW 111
Query: 250 ENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLS----------------RSIFTPKMH 293
E +++ K +R P + D+ GM+HIRD+L+ +S T
Sbjct: 112 EVLELFEKSGHSRMPVYAETLDDPRGMIHIRDVLNYITRQARQKARRRTTAKSAATEVAP 171
Query: 294 DFNQ-------------IVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLT 340
F+ ++RK++ VP S S ++ +M+ I ALVIDEYGGT GL++
Sbjct: 172 KFDMSRIDLAKTIGELNLMRKVLFVPPSMMASGLMARMQASHIQMALVIDEYGGTDGLVS 231
Query: 341 MEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEF--DKECEQV- 397
+EDI+E ++G+I DE+D ++ I + +GVF ++ DLE + + F + E V
Sbjct: 232 LEDIVEMVVGDIEDEHDDEEIMIAEDADGVFVVDARADLEELAARIGPGFAVGEHGEDVD 291
Query: 398 TLGGYVFSLLERMPMEGDTIVS-HGYSFEVLSVDGARIKRLKAV 440
T+GG +FS+L R+P+ G+ + + Y F VL VD R+K+++ V
Sbjct: 292 TVGGLIFSVLGRIPVRGEVVQAIPDYEFHVLEVDPRRVKKVRIV 335
>ref|NP_520945.1| (NC_003295) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
emb|CAD16531.1| (AL646072) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
Length = 425
Score = 117 bits (292), Expect = 4e-25
Identities = 106/432 (24%), Positives = 192/432 (43%), Gaps = 26/432 (6%)
Query: 23 LLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLGITLSS 82
LL+ +AFF +SE +L+ + + RL L K + A+ + + D LS +G L +
Sbjct: 15 LLLCCSAFFSISETSLMALNRHRLRHLAKSNVAGARRTQGLLGQTDKLLSLILIGNNLIN 74
Query: 83 LALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAI 142
A+ + IA L F + ++ IA + FL +V EI PK
Sbjct: 75 TAVPVL----IANLAIHYFGNS----------GTTLSIATAIVAFLIIVFCEIAPKIAGA 120
Query: 143 AKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH-DGTHSEEELKIIV 201
E+ + A+ + + P+V + + L+ + INP++ + S EEL+ +V
Sbjct: 121 TYPERISFPASFIIAPLLRLATPLVTVVNAFVTVLLRLVRINPRQAPEQRMSAEELRTLV 180
Query: 202 GESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFT 261
ES I I+ N D + ++MTPR + LD EE I + +
Sbjct: 181 LES--GNFIPHKHRSILLNLFDLDAITVDDVMTPRARVESLDLSRPIEEVIQQLETCYHN 238
Query: 262 RYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHD-FNQIVRKMIIVPESASISQILIKMKK 320
+ P + D ++G++H+R LS +HD F ++ K VP + + L ++
Sbjct: 239 KLPVFEQDTDQVLGILHVRKALSLLGHAELIHDDFRSLLAKPYFVPSGTPVFRQLQYFQE 298
Query: 321 EQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL---EEGVFELEGML 377
+ LVI+EYG GL+T+EDIIEE++G E+ KL + + + +
Sbjct: 299 NRRRIGLVINEYGDMLGLVTLEDIIEEMIG----EFTTTLPNAGKLAWDAQNAYLADAGM 354
Query: 378 DLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRL 437
L + L ++ + + TL G V +LE +P ++ G +++ +D I+ +
Sbjct: 355 SLRDLNRRLGLQLPTDGPK-TLNGLVLEVLEEIPEAPVSVRIAGCVMDIVQMDSQSIRTV 413
Query: 438 KAVKQDQGENEA 449
+ + G+ +
Sbjct: 414 RLHRPAAGQKRS 425
>ref|NP_522733.1| (NC_003296) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
emb|CAD18323.1| (AL646083) PROBABLE TRANSMEMBRANE PROTEIN [Ralstonia solanacearum]
Length = 526
Score = 116 bits (291), Expect = 5e-25
Identities = 91/376 (24%), Positives = 171/376 (45%), Gaps = 21/376 (5%)
Query: 84 ALGWVGE-PAIAKLLAALFESMDLRENPI--FIHSMSVVIAFLSITFLHVVLGEIVPKSL 140
A+G V + P + +A +M P+ F+++ V+ L ++FL ++ +V + L
Sbjct: 147 AVGMVNDLPVMMAAVAVAMGAMLFASRPLTDFVNAHRTVVV-LCLSFLLMIGFSLVAEGL 205
Query: 141 AIAKSEKATLFAARPLHVFWVVFYPVVR-----------LFDVIAHFFLKKMGINPKEHD 189
K L+AA + F V + L + A L +G +H
Sbjct: 206 GF-HIPKGYLYAAIGFSILIEFFNQVAQRNSDRYERRRPLRERTADTVLSLLGERRADHG 264
Query: 190 GTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE 249
+E G E + E ++ ++ S + IMTPR D+ +D E
Sbjct: 265 TGEAEAAASRAPGLPTPETVFRPEERSMVSGVLGLAERSVRSIMTPRHDISWVDLEGDIA 324
Query: 250 ENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESA 309
++L ++P C+G D+++G+ +DL+ + T D + V+ + V +
Sbjct: 325 HTRQLLLAVPHNQFPVCRGGLDDLVGVARAKDLMG-DLDTRGAIDVERSVKPALKVSDGI 383
Query: 310 SISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEG 369
I +++ ++K+ + +V D G++T D++E I GE DE + + G+ L EG
Sbjct: 384 GILRLMDQLKRSRGRMMVVTDPLNVVQGVVTPIDVLEAIAGEFPDEDE--RPGVVALREG 441
Query: 370 VFELEGMLDLESVEEALHIEF--DKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVL 427
+E+ G DL +E+ LH+++ D+ +LGGY+F +R+P D +V H F +L
Sbjct: 442 CWEVAGEADLRQLEDILHVDWLLDEGGGATSLGGYLFRQWDRLPEVSDALVRHDLRFVIL 501
Query: 428 SVDGARIKRLKAVKQD 443
V RI R++ + +
Sbjct: 502 EVGSRRIMRVRIERME 517
>ref|NP_109847.1| (NC_000912) tlyC homolog, hemolysin activity doubtful [Mycoplasma
pneumoniae]
sp|P75586|Y146_MYCPN Hypothetical protein MG146 homolog (VXpSPT7_orf424)
pir||S73998 hemolysin hlyC homolog VXpSPT7_orf424 - Mycoplasma pneumoniae
(strain ATCC 29342)
gb|AAB96320.1| (AE000062) tlyC homolog, hemolysin activity doubtful, see comments
[Mycoplasma pneumoniae]
Length = 424
Score = 114 bits (286), Expect = 2e-24
Identities = 89/365 (24%), Positives = 176/365 (47%), Gaps = 26/365 (7%)
Query: 11 PSESILMLMVAFLLVLLNAFFVLS--EFALVKVRKTRLEELVKIGNSNAKLALKMSQRLD 68
PS +L L++ +++L V+S E A+ + + VK N KL K+
Sbjct: 5 PSGGLLALIIISIILLACISAVVSAYETAITSITSYKWSNYVKTHNKQKKLTTKIVNHFQ 64
Query: 69 TYLSATQLGITLSSLALGWVGEPAIAKLLA-ALFESMDLR-ENPIFIHSMSVVIAFLSIT 126
SA + I V +A L++ LF ++D +NP +++++I+ +
Sbjct: 65 KNYSACLITIL--------VANNIVAILVSNILFLALDQSIKNPAISSALNLLISGV--- 113
Query: 127 FLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK 186
L ++L EI PK+LA + ++ A ++ F+++F+P+ +L +I + K +
Sbjct: 114 -LLLMLCEITPKTLARINIIRVLVYFAVVVYFFYILFWPITKLASIIFAKYEKAPPV--- 169
Query: 187 EHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEEN 246
S ++ + E + G+ +G++IK F +IM +V E +
Sbjct: 170 ------SRRDVYFFIDEIEQNGLFTKEDGQLIKRTLIFDQVLVDQIMIKWNRVVYCYEGD 223
Query: 247 SYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVP 306
+ + L G F+R P + + ++G +H++DL S + + +++ ++V
Sbjct: 224 PVKTIKEKFLHGQFSRMPVLDQTSNEVVGFIHLKDLFSSLEKSNEPFVLQELLYPAVLVS 283
Query: 307 ESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKL 366
+ I Q L +M+ + H A+V D++ T G+++MEDIIEE++GEI DE+D + E + L
Sbjct: 284 NTTPIKQALRQMRLHRAHLAVVQDKHHHTIGIVSMEDIIEELVGEIYDEHD-EVEAVQTL 342
Query: 367 EEGVF 371
+ +
Sbjct: 343 DNNTW 347
>ref|NP_300451.1| (NC_002491) CBS domain protein [Chlamydophila pneumoniae J138]
dbj|BAA98602.1| (AP002546) CBS domain protein [Chlamydophila pneumoniae J138]
Length = 411
Score = 114 bits (285), Expect = 2e-24
Identities = 83/310 (26%), Positives = 141/310 (44%), Gaps = 7/310 (2%)
Query: 130 VVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHD 189
++LGEI+PK++A+ + + A + +F P++ V ++ ++ I K+
Sbjct: 100 LILGEILPKAVALPFNTQIASSVAPLILCVTKIFKPLLHWGIVGINYVVQ--WILSKQQI 157
Query: 190 GTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE 249
+ELK ++ G+++ E ++ SD S KE M PR+D++ D + E
Sbjct: 158 DIIQPQELKEVLQSCKDFGVVNQEESRLLYGYLSLSDCSVKERMQPRQDILFYDIQTPLE 217
Query: 250 ENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESA 309
+ K H +R P C + N++G+ R LL D +++K +PE+
Sbjct: 218 NLYLLFSKQHCSRVPICNDNLQNLLGICTARSLLLHDKPLQSSDDLLPLLKKPYYMPETI 277
Query: 310 SISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEG 369
S L +M E ++IDEYG GL+T ED+ E + GEI D+ D K I G
Sbjct: 278 SAKMALCQMAAEDETLGMIIDEYGSIEGLITQEDLFEIVAGEIVDQRDNK---ILYTTSG 334
Query: 370 --VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVL 427
V G L+L E I T+GG++ + +P G + + F+VL
Sbjct: 335 ADVIIASGTLELREFSEIFDINLPTNNNIATIGGWLIEQIGTIPTTGMKLSWNNLLFQVL 394
Query: 428 SVDGARIKRL 437
RI+R+
Sbjct: 395 DAAPNRIRRV 404
>ref|NP_224594.1| (NC_000922) CBS Domain protein (Hemolysin Homolog) [Chlamydophila
pneumoniae CWL029]
ref|NP_444909.1| (NC_002179) conserved hypothetical protein [Chlamydophila
pneumoniae AR39]
pir||H72084 cbs domain protein (hemolysin homolog) - Chlamydophila pneumoniae
(strains CWL029 and AR39)
gb|AAD18537.1| (AE001623) CBS Domain protein (Hemolysin Homolog) [Chlamydophila
pneumoniae CWL029]
gb|AAF38210.1| (AE002198) conserved hypothetical protein [Chlamydophila pneumoniae
AR39]
Length = 411
Score = 114 bits (285), Expect = 2e-24
Identities = 83/310 (26%), Positives = 141/310 (44%), Gaps = 7/310 (2%)
Query: 130 VVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHD 189
++LGEI+PK++A+ + + A + +F P++ V ++ ++ I K+
Sbjct: 100 LILGEILPKAVALPFNTQIASSVAPLILCVTKIFKPLLHWGIVGINYVVQ--WILSKQQI 157
Query: 190 GTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE 249
+ELK ++ G+++ E ++ SD S KE M PR+D++ D + E
Sbjct: 158 DIIQPQELKEVLQSCKDFGVVNQEESRLLYGYLSLSDCSVKERMQPRQDILFYDIQTPLE 217
Query: 250 ENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESA 309
+ K H +R P C + N++G+ R LL D +++K +PE+
Sbjct: 218 NLYLLFSKQHCSRVPICNDNLQNLLGICTARSLLLHDKPLQSSDDLLPLLKKPYYMPETI 277
Query: 310 SISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEG 369
S L +M E ++IDEYG GL+T ED+ E + GEI D+ D K I G
Sbjct: 278 SAKMALCQMAAEDETLGMIIDEYGSIEGLITQEDLFEIVAGEIVDQRDNK---ILYTTSG 334
Query: 370 --VFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVL 427
V G L+L E I T+GG++ + +P G + + F+VL
Sbjct: 335 ADVIIASGTLELREFSEIFDINLPTNNNIATIGGWLIEQIGTIPTTGMKLSWNNLLFQVL 394
Query: 428 SVDGARIKRL 437
RI+R+
Sbjct: 395 DAAPNRIRRV 404
>ref|NP_441476.1| (NC_000911) hemolysin [Synechocystis sp. PCC 6803]
sp|P74078|YC54_SYNY3 Hypothetical protein sll1254
pir||S75595 hemolysin, 38K - Synechocystis sp. (strain PCC 6803)
dbj|BAA18156.1| (D90912) hemolysin [Synechocystis sp. PCC 6803]
Length = 346
Score = 112 bits (279), Expect = 1e-23
Identities = 91/371 (24%), Positives = 171/371 (45%), Gaps = 36/371 (9%)
Query: 15 ILMLMVAFLLVLLNAFFV-LSEFALVKVRKTRLEELVKIGNSNAKLAL-----KMSQRLD 68
+L ++ A +VLL + +E AL V ++ +L + N +A +AL +M++ +
Sbjct: 1 MLEIVAAIFIVLLGSGICSCAEAALFSVPLVKVRQLSQSNNPSA-IALQAIRHRMNRPIG 59
Query: 69 TYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFL 128
T + + + S+ +G + + +F + +T L
Sbjct: 60 TIVVLNNIFNIVGSITIGALATKHLQDAWMGVFSGI--------------------LTLL 99
Query: 129 HVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH 188
+V GEI+PK+L + L A P+ ++F P+V L + I + F +
Sbjct: 100 IIVFGEIIPKTLGERYATNIALLIAIPVRFLTLIFTPLVWLIEQITNPFTHGKRVP---- 155
Query: 189 DGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSY 248
+ +E E+K + +EG+I+ E ++I+ +D A ++MTPR + L E +
Sbjct: 156 --STNEAEIKFLATLGYKEGVIEGDEEQMIQRVFQLNDLMAVDLMTPRVIITYLLGELTL 213
Query: 249 EENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPES 308
E +++ TR D ++G+ +DLL+ I ++ R VPE
Sbjct: 214 AECQQDIIQSQHTRILIVDEYIDEVLGIALKQDLLTALIQGEGYKTIAELARPAQFVPEG 273
Query: 309 ASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLK---QEGINK 365
++L + ++++ H +VIDEYGG AG++T+ED++E + GEI DE D QE K
Sbjct: 274 MRADKLLKQFQEKREHLMVVIDEYGGVAGVITLEDVVEVLTGEIVDETDKNIDLQEIARK 333
Query: 366 LEEGVFELEGM 376
+ + + G+
Sbjct: 334 KRQALLKQRGV 344
>ref|NP_405113.1| (NC_003143) putative membrane protein [Yersinia pestis]
emb|CAC90350.1| (AJ414148) putative membrane protein [Yersinia pestis]
Length = 528
Score = 111 bits (278), Expect = 2e-23
Identities = 73/259 (28%), Positives = 132/259 (50%), Gaps = 12/259 (4%)
Query: 190 GTHSEEELKI----IVGESLREG--IIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLD 243
G H E EL ++ ++ EG + ++ E +I+ + + IMT R D+ LD
Sbjct: 259 GKHEEAELDNHTANLIADNTSEGQEVFNAQERRMIERVLGLAQRTVSSIMTSRHDVEYLD 318
Query: 244 EENSYEENIDIVLKGHFTRYPYCKGSK-DNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKM 302
+ E+ ++ K TR + S D +G++H+ DLL + + K+ D ++R+
Sbjct: 319 LNDPPEKLTQLLAKNLHTRIVVTEDSSTDEPLGVIHVIDLLKQQLANEKL-DLRSLIRQP 377
Query: 303 IIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEI---SDEYDLK 359
+I PE S+ L + ++ Q H A V+DE+G G++T+ D++E I G + +E D +
Sbjct: 378 LIFPEQVSLLMALEQFRQAQTHFAFVVDEFGSIEGVVTLTDVMETIAGNLPVAGEELDAR 437
Query: 360 QEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVS 419
+ I + E+G + G + LE + L + D++ E TL G + +R+P G+ +
Sbjct: 438 HD-IQQTEDGCWIANGYMPLEDLVLYLPLPIDEKREYHTLAGLLMEHTQRIPKVGEQLTI 496
Query: 420 HGYSFEVLSVDGARIKRLK 438
Y FE L V+ RI ++K
Sbjct: 497 GDYLFEPLVVNSHRILKVK 515
>ref|NP_356300.1| (NC_003063) AGR_L_1024p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_534833.1| (NC_003305) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAK89085.1| (AE008249) AGR_L_1024p [Agrobacterium tumefaciens str. C58
(Cereon)]
gb|AAL45149.1| (AE009364) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 518
Score = 109 bits (272), Expect = 8e-23
Identities = 68/247 (27%), Positives = 132/247 (52%), Gaps = 5/247 (2%)
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
E +I ++ + + S E ++I+ ++ IMTPR ++ LD + ++
Sbjct: 268 ETADVIAAQAAQGDLFKSEEKDMIRGVLTLAERPVVSIMTPRTEIDWLDIDADHDTLRSR 327
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQI 314
+L+ +R +G D+ +G+ RDLL + K++ + +R+ ++V ESA+ Q+
Sbjct: 328 LLELDHSRLMLAQGKLDSFLGVAATRDLLRDLLHDGKLN-LERSLREPLVVHESATALQV 386
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLE-EGVFEL 373
+ +++ + A++IDEYG G+ T DI+E I GE DE + Q I+ LE +G + +
Sbjct: 387 MEQLRTSPLQMAVIIDEYGTLQGIATPTDILEAIAGEFPDEGEEAQ--ISGLEQDGSWLI 444
Query: 374 EGMLDLESVEEALHIEFDKECEQV-TLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGA 432
+G +D+ V L I+ + ++ T+ GY+ L R+P G+ I G+ FE++S
Sbjct: 445 DGTVDIRRVSYLLDIDLVDDADRYSTIAGYILWRLSRLPEIGERISGDGFEFEIVSCSDR 504
Query: 433 RIKRLKA 439
I++++A
Sbjct: 505 NIEKIRA 511
>ref|NP_600419.1| (NC_003450) COG1253:Hemolysins and related proteins containing CBS
domains [Corynebacterium glutamicum]
dbj|BAB98586.1| (AP005277) Uncharacterized CBS domain-containing proteins
[Corynebacterium glutamicum ATCC 13032]
Length = 336
Score = 106 bits (265), Expect = 5e-22
Identities = 89/345 (25%), Positives = 165/345 (47%), Gaps = 27/345 (7%)
Query: 12 SESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYL 71
+E ++L LL+ L+AFFV+ EFAL+ R+ RLEE V+ S+ + AL+ L L
Sbjct: 2 TEWYVVLPATILLIALSAFFVIIEFALLAARRNRLEETVETSRSS-RAALRSLNELTLML 60
Query: 72 SATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVV 131
+ QLGIT+ + ALG + +P + L LFE R + ++ +++ +TFLH+V
Sbjct: 61 AGAQLGITMVTFALGAITKPWVHYALMPLFEWA--RIPLVMADVIAFILSLFIVTFLHLV 118
Query: 132 LGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH--D 189
+GE+ PKS AIA E A A P F +F P+++ + +A+ ++K+G P +
Sbjct: 119 IGEMAPKSWAIAHPETALRTIAIPARGFINLFRPLLQWINKMANDLVRKVGETPVDRAAA 178
Query: 190 GTHSEEELKIIVGESLREGIID-----SVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDE 244
G + + L ++ S G +D + G I + T T +
Sbjct: 179 GGYDTDTLHALIEHSRETGALDQQSAAQISGIIKLDKITVGQTLTASPFTHSASATVAEV 238
Query: 245 ENSYEE--NIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKM 302
+ + + ++ +++ +P+ ++H+RD L S ++ R +
Sbjct: 239 QAAAQRSGSLRVLIDAPSHLFPH----------VIHVRDTLGAS----PDEKASKWSRPI 284
Query: 303 IIVPESASISQILIKMKKEQIHTALVIDEYGGTA-GLLTMEDIIE 346
+ V E+ ++ Q L M++ + V+ G T G++T + I++
Sbjct: 285 LTVAETDTLHQALEYMREHNEQISAVLSADGKTVLGVITWDHILK 329
>ref|NP_326345.1| (NC_002771) HEMOLYSIN C [Mycoplasma pulmonis]
emb|CAC13687.1| (AL445564) HEMOLYSIN C [Mycoplasma pulmonis]
Length = 429
Score = 105 bits (263), Expect = 8e-22
Identities = 91/349 (26%), Positives = 168/349 (48%), Gaps = 36/349 (10%)
Query: 14 SILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSA 73
SI++ MV +L+ L++FF +E A + +L + VK +A L K + L++
Sbjct: 28 SIVITMV--ILLFLSSFFSSAETAYASLNIAKLNQDVKSKKKSALLIQKQIKSFSKTLTS 85
Query: 74 TQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLG 133
+G L ++ + L S L+EN I ++ +A T L ++ G
Sbjct: 86 ILVGNNLVNIGFS---------SMTTLLLSKTLQENEFLITIFTIFLA----TPLVIIFG 132
Query: 134 EIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHS 193
EI+PK LA + A F + ++ V F+ + + + KK N T+S
Sbjct: 133 EIIPKILA---KKYAYQFLKKTCYI--VEFFNYLFIIITFPVLYFKKTNENV-----TNS 182
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
E +LK V + EG+I+ E ++I NA D + +++ L+ +++ + I+
Sbjct: 183 EMDLKSYVEIANEEGVINKDESKLISNAFDLNSEKVIRHYVKSENITFLNADDNVAKAIE 242
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
+ K ++R P + ++N +G++HI DLL T + + + ++ + +S+++
Sbjct: 243 LTKKDRYSRIPVKQ--QNNFLGIIHISDLLGEEPET----NIRKYIYQIPKISHFSSLTK 296
Query: 314 ILIKMKKEQIHTALVI-----DEYGGTAGLLTMEDIIEEIMGEISDEYD 357
L ++ E+ H A V + G++TMEDIIEE++GEI DEYD
Sbjct: 297 ALESLRSEKKHMAFVTKKNLESQQEQIIGIITMEDIIEELVGEIYDEYD 345
>ref|NP_077902.1| (NC_002162) hemolysin [Ureaplasma urealyticum]
pir||D82936 hemolysin UU072 [imported] - Ureaplasma urealyticum
gb|AAF30477.1|AE002107_1 (AE002107) hemolysin [Ureaplasma urealyticum]
Length = 442
Score = 104 bits (260), Expect = 2e-21
Identities = 95/402 (23%), Positives = 186/402 (45%), Gaps = 37/402 (9%)
Query: 15 ILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLE-ELVKIGNSN-AKLALKMSQRLDTYLS 72
+++ ++ +L+ + FF +E A+ V + + E KI + + KM L+
Sbjct: 21 VILAIITLILICFSVFFSAAETAITSVTTVKWKTESNKIKSKTITNVVYKMINNYTITLA 80
Query: 73 ATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVL 132
+G TL + A + A + +S N ++ IA IT + ++
Sbjct: 81 TILIGNTLVNTASSTIA----GLFFAGIMKSFSTTSNA---EAIGTGIATGIITLIVLIF 133
Query: 133 GEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTH 192
GE +PK+ A K A PL+ F+++F+P+ + I F KK ++ T
Sbjct: 134 GEFIPKNFAKKNPIKVLKLVAYPLNCFYILFWPLTWSLNRI---FNKK-----SQNIITA 185
Query: 193 SEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI 252
+EEELK ++ EG +DS E II A F D K+ M P +V ++E + ++
Sbjct: 186 TEEELKSLIEVIRHEGTLDSQEALIINKAILFDDILIKQKMVPWTQVVKINENKTVLQSF 245
Query: 253 DIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKM----IIVPES 308
+I F+R D ++G+++++ ++ + P N+I+R + +++ +
Sbjct: 246 EIFNSTGFSRL-VVVNKNDEVVGIIYLKKIIKYLLNEP-----NKIIRTIMQTPLLINQK 299
Query: 309 ASISQILIKMKKEQIHTALVIDEY--GGTAGLLTMEDIIEEIMGEISDEYDLKQE--GIN 364
++ L M+ ++IH +V+D G++T+E+I EE+ G + DE D + E I
Sbjct: 300 DTLYDGLRTMQFQRIHLGIVVDNITEKNPIGIITLENITEELTGNVYDETDNENEIKEIQ 359
Query: 365 KLEEGVFELEGMLDLESVEEALHIEFDKECE---QVTLGGYV 403
+ E + ++ + + LH DK+ E +++G Y+
Sbjct: 360 IVNETTWRVDAKTNAKLF---LHQYIDKDIEVNDDISMGKYI 398
>ref|NP_250022.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||G83479 conserved hypothetical protein PA1331 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG04720.1|AE004562_7 (AE004562) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 515
Score = 101 bits (251), Expect = 2e-20
Identities = 68/265 (25%), Positives = 130/265 (48%), Gaps = 5/265 (1%)
Query: 174 AHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIM 233
AH L+ +G E D EE+ + E + + D E +I ++ + +M
Sbjct: 250 AHAVLRLLGGQRLEADEVG--EEVADLFEEGDDQVVFDRRERVMISGVLQLAEKPIRSLM 307
Query: 234 TPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCK-GSKDNIIGMVHIRDLLSRSIFTPKM 292
T R ++ C+D ++ E +L+ ++R P + G + +G VH ++LL + +
Sbjct: 308 TVRAEVDCIDLDSGREAIRAALLESSYSRLPLVRDGRVEEPLGYVHKKELL-KELLAGAQ 366
Query: 293 HDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEI 352
D + R+ + + + SI L +M++ H A V++E+G GLLT+ DI+E I GE+
Sbjct: 367 PDLESLARQPLNLLQDCSILNALEQMREASTHVAFVVNEFGEFIGLLTLTDILESIAGEL 426
Query: 353 SDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPM 412
D ++ + + +G + + G ++L V + + + TL G V SLL+R+P+
Sbjct: 427 PDASEIDGPDVVEENDG-YLVSGAMNLSQVRRRVGFDARATEDYQTLAGLVMSLLDRLPV 485
Query: 413 EGDTIVSHGYSFEVLSVDGARIKRL 437
GD + + V+ V+ R+ R+
Sbjct: 486 IGDRLQWQDWELRVVEVEERRVTRV 510
>emb|CAA10144.1| (AJ012716) hypothetical protein [Erwinia chrysanthemi]
Length = 264
Score = 101 bits (251), Expect = 2e-20
Identities = 61/264 (23%), Positives = 125/264 (47%), Gaps = 4/264 (1%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
L++ L+ ++AFF LSE +L RK +L+ + G+ NA L LK + + + Q+G
Sbjct: 5 LLIILFLIAISAFFSLSEISLAASRKIKLKLMADEGDLNAALVLKFQETPGIFFTVIQIG 64
Query: 78 ITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVP 137
+ ++ G +G+ A + LF S ++ + S + +F+ +T L ++ G++ P
Sbjct: 65 LNAVAILAGIIGDAAFSPYFEMLFASFLPQD---MVARASFICSFVLVTSLFILFGDLTP 121
Query: 138 KSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
K + + E + P+ +VF P+V LF+ +A+ + + P + +++
Sbjct: 122 KRIGMIAPEAIAIRIINPMRFCLLVFRPLVWLFNGLANLIFRLFKL-PMVRKEDITPDDI 180
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLK 257
+V G++ E E+I+N + + MT R+ +V D + + +
Sbjct: 181 YAVVEAGALAGVLRKQEHELIENVFELESRTVPSSMTSRESVVYFDLHEDETQIKEKIAH 240
Query: 258 GHFTRYPYCKGSKDNIIGMVHIRD 281
+++ C G+ D I+G V +D
Sbjct: 241 QPHSKFLVCNGTIDQIVGYVDSKD 264
>ref|NP_296904.1| (NC_002620) conserved hypothetical protein [Chlamydia muridarum]
pir||D81693 conserved hypothetical protein TC0527 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39369.1| (AE002321) conserved hypothetical protein [Chlamydia muridarum]
Length = 412
Score = 100 bits (250), Expect = 3e-20
Identities = 90/424 (21%), Positives = 177/424 (41%), Gaps = 22/424 (5%)
Query: 14 SILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSA 73
S +++++ + VL + F LS AL + + L+ N + L+ L Y +
Sbjct: 3 SPVIIVLTAVFVLCSGFISLSHIALFSLPSS----LIAHYNHSKNKQLRQIANLMAYPNH 58
Query: 74 TQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLG 133
+ + + + + IA L+ ++ F+ ++ V +A L +VLG
Sbjct: 59 LLITLVFFDIGINIGVQNCIATLVG---------DSASFLMTVGVPLA------LTLVLG 103
Query: 134 EIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHS 193
EI+PK +AI + + + V F P+ +F ++KM ++ +
Sbjct: 104 EIIPKVIAIPYNVRIARLVTPIIFVSTKSFRPIFDWAISGINFIIQKMLVH--QEGDFIQ 161
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
+ELK ++ G+++ E ++ + S KE M P++++V D E
Sbjct: 162 PQELKEVLRSCKDFGVVNHEESRLLFGYLSMEEGSIKERMKPKQEIVFYDVLTPIENLYR 221
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
+ ++R CK N++G+ + L+ D ++RK +PE+ S
Sbjct: 222 LFSGQRYSRILVCKDGLQNLLGVCSAKSLVLHKEQLQSSEDLLPLLRKPHYIPETVSAKT 281
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFEL 373
L + KE ++IDEYG GL+T D+ E + E+S ++ + ++ V
Sbjct: 282 ALYHLAKEDSGLGIIIDEYGSIEGLITQNDLFEIVSNEVSHIRPASKQFAHS-DKNVIIA 340
Query: 374 EGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGAR 433
G +L + ++ VT+GG++ L +P G + F+VL
Sbjct: 341 AGTYELSDFYDLFGVDLPTTSNCVTIGGWLTEQLGEIPETGTKFAWGQFVFQVLDAAPNC 400
Query: 434 IKRL 437
+KR+
Sbjct: 401 VKRV 404
>ref|NP_274493.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||C81077 conserved hypothetical protein NMB1485 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41841.1| (AE002498) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 518
Score = 100 bits (249), Expect = 4e-20
Identities = 64/243 (26%), Positives = 127/243 (51%), Gaps = 4/243 (1%)
Query: 202 GESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFT 261
GES + + E +I++ ++ +M PR+D+ LD S EE + ++
Sbjct: 273 GESGDDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYS 332
Query: 262 RYPYC-KGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKK 320
R K D +G ++ +DLLS+ + T + D +R+ +++P+S + + ++
Sbjct: 333 RLLVVGKAGVDEPLGYINKKDLLSQLLETGGL-DIQTALRQPLVLPDSTTALGAIELFRQ 391
Query: 321 EQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQE-GINKLEEGVFELEGMLDL 379
ALV+DE+G G++TM+D++E I GE +E++ ++E + + +EG L+
Sbjct: 392 SSADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALEY 451
Query: 380 ESVEEALHI-EFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
+ L++ + +++ + T+ G + L+ +P GD HG+ FEV+ +G RI+R+K
Sbjct: 452 VELAPQLNLPQQEEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIERVK 511
Query: 439 AVK 441
K
Sbjct: 512 ITK 514
>ref|NP_284409.1| (NC_003116) conserved hypothetical integral membrane protein
[Neisseria meningitidis Z2491]
pir||A81865 conserved hypothetical integral membrane protein NMA1694 [imported]
- Neisseria meningitidis (group A strain Z2491)
emb|CAB84922.1| (AL162756) conserved hypothetical integral membrane protein
[Neisseria meningitidis Z2491]
Length = 518
Score = 100 bits (248), Expect = 5e-20
Identities = 64/243 (26%), Positives = 126/243 (51%), Gaps = 4/243 (1%)
Query: 202 GESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFT 261
GES + + E +I++ ++ +M PR+D+ LD S EE + ++
Sbjct: 273 GESGDDAHFEENEKSMIRSVLTLAERPIMGVMIPRRDIERLDISQSREEQCAQLQNTPYS 332
Query: 262 RYPYC-KGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKK 320
R K D +G ++ +DLLS+ + T + D +R+ +++P+S + + ++
Sbjct: 333 RLLVVGKAGVDEPLGYINKKDLLSQLLETGGL-DIQTALRQPLVLPDSTTALGAIELFRQ 391
Query: 321 EQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQE-GINKLEEGVFELEGMLDL 379
ALV+DE+G G++TM+D++E I GE +E++ ++E + + +EG L+
Sbjct: 392 SSADYALVVDEFGAVLGMVTMKDLLETIAGEFPEEFEREEEPAVQGNPDESLTVEGALEY 451
Query: 380 ESVEEALHI-EFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
+ L++ + ++ + T+ G + L+ +P GD HG+ FEV+ +G RI+R+K
Sbjct: 452 VELASQLNLPQQQEDADFHTVAGLIMEELQTIPDVGDFADFHGWRFEVVEKEGQRIERVK 511
Query: 439 AVK 441
K
Sbjct: 512 ITK 514
>ref|NP_461064.1| (NC_003197) putative inner membrane protein [Salmonella typhimurium
LT2]
gb|AAL21023.1| (AE008794) putative inner membrane protein [Salmonella typhimurium
LT2]
Length = 526
Score = 99.0 bits (245), Expect = 1e-19
Identities = 57/241 (23%), Positives = 123/241 (50%), Gaps = 4/241 (1%)
Query: 209 IIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYC-K 267
I + E +I+ + + + IMT R D+ +D E ++ K TR +
Sbjct: 282 IFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEAEIRALLEKNQHTRLVVTGE 341
Query: 268 GSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTAL 327
+++++G+VH+ DLL +S+ ++ ++R+ ++ PE+ + L + + + H A
Sbjct: 342 NEQEDLLGVVHVIDLLQQSLRGEPLN-LRALIRQPLVFPETLPLLPALEQFRNARTHFAF 400
Query: 328 VIDEYGGTAGLLTMEDIIEEIMGEISDEYDL--KQEGINKLEEGVFELEGMLDLESVEEA 385
V+DE+G G++T+ D++E I G + +E + + I K +G + G + LE + +
Sbjct: 401 VVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQKNPDGSWTANGHMPLEDLVQY 460
Query: 386 LHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVKQDQG 445
+ + D++ E T+ G + L+R+P G+ + Y + L V+ R+++++ + G
Sbjct: 461 VPLPLDEKREYHTIAGLLMEYLQRIPQTGEEVQVGDYLLKTLQVESHRVQKVQLIPLHNG 520
Query: 446 E 446
E
Sbjct: 521 E 521
>sp|P76389|YEGH_ECOLI Hypothetical protein yegH
Length = 527
Score = 98.2 bits (243), Expect = 2e-19
Identities = 62/270 (22%), Positives = 135/270 (49%), Gaps = 6/270 (2%)
Query: 183 INPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCL 242
++ ++ D E ++V ++ I + E +I+ + + + IMT R D+ +
Sbjct: 257 LSGQKEDAELDAETASMLVDHGNQQ-IFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHI 315
Query: 243 DEENSYEENIDIVLKGHFTRYPYCKGSK-DNIIGMVHIRDLLSRSIFTPKMHDFNQIVRK 301
D EE ++ + TR G ++++G+VH+ DLL +S+ ++ ++R+
Sbjct: 316 DLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLN-LRVLIRQ 374
Query: 302 MIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL--K 359
++ PE+ + L + + + H A V+DE+G G++T+ D+ E I G + +E +
Sbjct: 375 PLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDA 434
Query: 360 QEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVS 419
+ I K +G + G + LE + + + + D++ E T+ G + L+R+P G+ +
Sbjct: 435 RHDIQKNADGSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQV 494
Query: 420 HGYSFEVLSVDGARIKRLKAVK-QDQGENE 448
Y + L V+ R+++++ + + GE E
Sbjct: 495 GDYLLKTLQVESHRVQKVQIIPLRKDGEME 524
>dbj|BAA15916.1| (D90844) ORF_ID:o355#2; similar to [SwissProt Accession Number
P43932] [Escherichia coli]
Length = 540
Score = 98.2 bits (243), Expect = 2e-19
Identities = 62/270 (22%), Positives = 135/270 (49%), Gaps = 6/270 (2%)
Query: 183 INPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCL 242
++ ++ D E ++V ++ I + E +I+ + + + IMT R D+ +
Sbjct: 270 LSGQKEDAELDAETASMLVDHGNQQ-IFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHI 328
Query: 243 DEENSYEENIDIVLKGHFTRYPYCKGSK-DNIIGMVHIRDLLSRSIFTPKMHDFNQIVRK 301
D EE ++ + TR G ++++G+VH+ DLL +S+ ++ ++R+
Sbjct: 329 DLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLN-LRVLIRQ 387
Query: 302 MIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL--K 359
++ PE+ + L + + + H A V+DE+G G++T+ D+ E I G + +E +
Sbjct: 388 PLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDA 447
Query: 360 QEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVS 419
+ I K +G + G + LE + + + + D++ E T+ G + L+R+P G+ +
Sbjct: 448 RHDIQKNADGSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQV 507
Query: 420 HGYSFEVLSVDGARIKRLKAVK-QDQGENE 448
Y + L V+ R+++++ + + GE E
Sbjct: 508 GDYLLKTLQVESHRVQKVQIIPLRKDGEME 537
>ref|NP_416567.1| (NC_000913) putative transport protein [Escherichia coli K12]
pir||F64972 hypothetical protein b2063 - Escherichia coli (strain K-12)
gb|AAC75124.1| (AE000296) putative transport protein [Escherichia coli K12]
Length = 549
Score = 98.2 bits (243), Expect = 2e-19
Identities = 62/270 (22%), Positives = 135/270 (49%), Gaps = 6/270 (2%)
Query: 183 INPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCL 242
++ ++ D E ++V ++ I + E +I+ + + + IMT R D+ +
Sbjct: 279 LSGQKEDAELDAETASMLVDHGNQQ-IFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHI 337
Query: 243 DEENSYEENIDIVLKGHFTRYPYCKGSK-DNIIGMVHIRDLLSRSIFTPKMHDFNQIVRK 301
D EE ++ + TR G ++++G+VH+ DLL +S+ ++ ++R+
Sbjct: 338 DLNAPEEEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLN-LRVLIRQ 396
Query: 302 MIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL--K 359
++ PE+ + L + + + H A V+DE+G G++T+ D+ E I G + +E +
Sbjct: 397 PLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDA 456
Query: 360 QEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVS 419
+ I K +G + G + LE + + + + D++ E T+ G + L+R+P G+ +
Sbjct: 457 RHDIQKNADGSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQV 516
Query: 420 HGYSFEVLSVDGARIKRLKAVK-QDQGENE 448
Y + L V+ R+++++ + + GE E
Sbjct: 517 GDYLLKTLQVESHRVQKVQIIPLRKDGEME 546
>ref|NP_660657.1| (NC_004061) hypothetical 56.5 kD protein in sdaA-manX [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM67868.1| (AE014108) hypothetical 56.5 kD protein in sdaA-manX [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 515
Score = 97.1 bits (240), Expect = 4e-19
Identities = 106/453 (23%), Positives = 201/453 (43%), Gaps = 38/453 (8%)
Query: 12 SESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYL 71
S + L + L++L+ F+L + A +++ + RLE N A + + +
Sbjct: 77 SNNFFSLSIRDLILLIGGLFLLFK-ATIELHE-RLENEDHENTENKNYASFWAVVIQIVV 134
Query: 72 SATQLGITLSSLALGWVGE---PAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFL 128
+ A+G V + IA +LA + + + FI+ V+ L ++FL
Sbjct: 135 LDAVFSLDAIITAVGMVNQLLIMMIAVVLATILMLLASKALTNFINIHQTVVV-LCLSFL 193
Query: 129 HVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIA-HFFLKKMGINPKE 187
++ +V ++L K L+AA + F ++ +F+ IA H F+K P
Sbjct: 194 LMIGFSLVAEALKFY-IPKGYLYAA-------IGFSILIEIFNQIARHNFMKNQSRKPMR 245
Query: 188 HDGTHS------------------EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSA 229
+ + + +I++ SL E +I + S
Sbjct: 246 QRAAEAILRLMIREKNNNKNRIKTDNKAEIVLSSSLETETFKDEEKYMINGVLTLAGRSI 305
Query: 230 KEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFT 289
K IMTPR ++ ++ E + E +L +P CKG D IIG+V ++LL
Sbjct: 306 KSIMTPRSNISWVNTEKTINEIRLQLLDTPHNLFPVCKGELDEIIGIVRAKELLVAIEKN 365
Query: 290 PKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIM 349
++ F + II+P++ +L +++ Q +V +E+G GL+T D++E I
Sbjct: 366 IDVYTFASQIPP-IIIPDTLDPINLLGVLRRAQGSFVIVSNEFGVVQGLITPLDVLEAIA 424
Query: 350 GEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHI-EFDKECEQVTLGGYVFSLLE 408
GE D D + I E+ + ++G DL S+++ L+ E K+ + +LGG + S
Sbjct: 425 GEFPDA-DETPDIIK--EQNSWLVKGETDLHSLQQLLNTKELIKQDDCASLGGLLISQKG 481
Query: 409 RMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVK 441
++P+ G+TI + +SF +++ RI ++ K
Sbjct: 482 QLPLPGETIKINSFSFHIVNATEYRIDLVRITK 514
>ref|NP_310895.1| (NC_002695) putative transport protein [Escherichia coli O157:H7]
dbj|BAB36291.1| (AP002560) putative transport protein [Escherichia coli O157:H7]
Length = 549
Score = 97.1 bits (240), Expect = 4e-19
Identities = 61/270 (22%), Positives = 135/270 (49%), Gaps = 6/270 (2%)
Query: 183 INPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCL 242
++ ++ D E ++V ++ I + E +I+ + + + IMT R D+ +
Sbjct: 279 LSGQKEDAELDAETASMLVDHGNQQ-IFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHI 337
Query: 243 DEENSYEENIDIVLKGHFTRYPYCKGSK-DNIIGMVHIRDLLSRSIFTPKMHDFNQIVRK 301
D +E ++ + TR G ++++G+VH+ DLL +S+ ++ ++R+
Sbjct: 338 DLNAPEDEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLN-LRVLIRQ 396
Query: 302 MIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL--K 359
++ PE+ + L + + + H A V+DE+G G++T+ D+ E I G + +E +
Sbjct: 397 PLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDA 456
Query: 360 QEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVS 419
+ I K +G + G + LE + + + + D++ E T+ G + L+R+P G+ +
Sbjct: 457 RHDIQKNADGSWTANGHMPLEDLVQYVPLPLDEKREYHTIAGLLMEYLQRIPKPGEEVQV 516
Query: 420 HGYSFEVLSVDGARIKRLKAVK-QDQGENE 448
Y + L V+ R+++++ + + GE E
Sbjct: 517 GDYLLKTLQVESHRVQKVQIIPLRKDGEME 546
>ref|NP_456665.1| (NC_003198) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD02482.1| (AL627273) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 526
Score = 96.7 bits (239), Expect = 5e-19
Identities = 56/241 (23%), Positives = 122/241 (50%), Gaps = 4/241 (1%)
Query: 209 IIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYC-K 267
I + E +I+ + + + IMT R D+ +D E ++ K TR +
Sbjct: 282 IFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHIDLNAPEAEIRALLEKNQHTRLVVTGE 341
Query: 268 GSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTAL 327
+++++G+VH+ DLL +S+ ++ ++R+ ++ PE+ + L + + + H A
Sbjct: 342 NEQEDLLGVVHVIDLLQQSLRGEPLN-LRALIRQPLVFPETLPLLPALEQFRNARTHFAF 400
Query: 328 VIDEYGGTAGLLTMEDIIEEIMGEISDEYDL--KQEGINKLEEGVFELEGMLDLESVEEA 385
V+DE+G G++T+ D++E I G + +E + + I K + + G + LE + +
Sbjct: 401 VVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQKNPDSSWTANGHMPLEDLVQY 460
Query: 386 LHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVKQDQG 445
+ + D++ E T+ G + L+R+P G+ + Y + L V+ R+++++ + G
Sbjct: 461 VPLPLDEKREYHTIAGLLMEYLQRIPQTGEEVQVGDYLLKTLQVESHRVQKVQLIPLHNG 520
Query: 446 E 446
E
Sbjct: 521 E 521
>ref|NP_288569.1| (NC_002655) putative transport protein [Escherichia coli O157:H7
EDL933]
gb|AAG57123.1|AE005432_4 (AE005432) putative transport protein [Escherichia coli O157:H7
EDL933]
Length = 549
Score = 96.3 bits (238), Expect = 7e-19
Identities = 61/270 (22%), Positives = 134/270 (49%), Gaps = 6/270 (2%)
Query: 183 INPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCL 242
++ ++ D E ++V ++ I + E +I+ + + + IMT R D+ +
Sbjct: 279 LSGQKEDAELDAETASMLVDHGNQQ-IFNPQERRMIERVLNLNQRTVSSIMTSRHDIEHI 337
Query: 243 DEENSYEENIDIVLKGHFTRYPYCKGSK-DNIIGMVHIRDLLSRSIFTPKMHDFNQIVRK 301
D +E ++ + TR G ++++G+VH+ DLL +S+ ++ ++R+
Sbjct: 338 DLNAPEDEIRQLLERNQHTRLVVTDGDDAEDLLGVVHVIDLLQQSLRGEPLN-LRVLIRQ 396
Query: 302 MIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL--K 359
++ PE+ + L + + + H A V+DE+G G++T+ D+ E I G + +E +
Sbjct: 397 PLVFPETLPLLPALEQFRNARTHFAFVVDEFGSVEGIVTLSDVTETIAGNLPNEVEEIDA 456
Query: 360 QEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVS 419
+ I K +G + G + LE + + + + D+ E T+ G + L+R+P G+ +
Sbjct: 457 RHDIQKNADGSWTANGHMPLEDLVQYVPLPLDEXREYHTIAGLLMEYLQRIPKPGEEVQV 516
Query: 420 HGYSFEVLSVDGARIKRLKAVK-QDQGENE 448
Y + L V+ R+++++ + + GE E
Sbjct: 517 GDYLLKTLQVESHRVQKVQIIPLRKDGEME 546
>ref|NP_240145.1| (NC_002528) hypothetical protein [Buchnera sp. APS]
sp|P57408|Y323_BUCAI Hypothetical protein BU323
dbj|BAB13031.1| (AP001119) hypothetical protein [Buchnera sp. APS]
Length = 521
Score = 96.3 bits (238), Expect = 7e-19
Identities = 111/461 (24%), Positives = 204/461 (44%), Gaps = 53/461 (11%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG 77
L + +++L FF+L F RLE + N A + + +
Sbjct: 83 LSIRDIILLFGGFFLL--FKTTMELHERLENNHHENSENKNYAGFWAVVIQIVVLDAVFS 140
Query: 78 ITLSSLALGWVGE---PAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGE 134
+ A+G V + IA +LA + + FI+ V+ L ++FL ++
Sbjct: 141 LDAIITAVGMVNQLLIMMIAVILATFLMLLASKALTNFINLHQTVVV-LCLSFLLMIGFS 199
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIA-HFFLKKMGINPKEHDGTHS 193
+V ++L K L+AA + F ++ +F+ IA H F+K P +
Sbjct: 200 LVTEALRFC-IPKGYLYAA-------IGFSILIEIFNQIARHNFMKNQSRRPMRQRA--A 249
Query: 194 EEELKIIVGESLREGII----------DSVEGE------------IIKNAXDFSDTSAKE 231
E L+++VGE ++ I DS++ +I + S +
Sbjct: 250 EAILRLMVGEQNKKQQIKKIEINSQKTDSIQSSKEMETFKDEERYMINGVLTLAGRSIRS 309
Query: 232 IMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPK 291
IMTPR ++ ++ E + +E +L + +P CKG D IIG+V ++LL + K
Sbjct: 310 IMTPRSNISWVNTEKNTDEIRMQLLDTPHSLFPVCKGELDEIIGIVRAKELL---VAIEK 366
Query: 292 MHDFNQIVRKM--IIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIM 349
D + K+ II+P++ ++L +++ Q +V +E+G GL+T D++E I
Sbjct: 367 KIDASTFSSKILPIIIPDTLDPIKLLGVLRRAQGSFVIVSNEFGVVQGLITPLDVLEAIA 426
Query: 350 GEISD---EYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSL 406
GE D D+ QE + L +G +L + L + EE + KE +LGG + +
Sbjct: 427 GEFPDADETPDIIQENNSWLVKGETDLHSLQQLLNTEELI-----KEDNYASLGGLLIAQ 481
Query: 407 LERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVKQDQGEN 447
++P+ G+ I H + F ++ RI ++ +K +Q +N
Sbjct: 482 KGQLPIPGEIIHIHPFYFHIVKATEYRIDLVRIIK-NQDDN 521
>ref|NP_539588.1| (NC_003317) INTEGRAL MEMBRANE PROTEIN / HEMOLYSIN [Brucella
melitensis]
gb|AAL51852.1| (AE009508) INTEGRAL MEMBRANE PROTEIN / HEMOLYSIN [Brucella
melitensis]
Length = 522
Score = 94.7 bits (234), Expect = 2e-18
Identities = 56/245 (22%), Positives = 126/245 (50%), Gaps = 3/245 (1%)
Query: 195 EELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDI 254
+ + +I ++ + E E+I+ D ++ + IM+PR ++ LD + ++
Sbjct: 271 DTVDVIAQQTAASDVFLPEEKEMIRGVLDLAERPVRSIMSPRNEVEWLDLDEDEDKIHAT 330
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQI 314
+ K +R + D IG+ ++DLL + K D++++V++ ++V E+A++ ++
Sbjct: 331 IRKLSHSRVVVARHQVDEFIGVALVKDLLL-DMTDKKAIDWDKVVKQPLVVHENANVLRV 389
Query: 315 LIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELE 374
+ +++ I +V+DE+G G++T DI+E I GE DE D + +G + ++
Sbjct: 390 MEQLRISPIQLGVVVDEHGSFEGVVTPTDILEAIAGEFPDE-DEEVAVAQSDGQGGYLVD 448
Query: 375 GMLDLESVEEALHIEF-DKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGAR 433
G D+ + L + D+ TL GY L +P+ G++ + G+ F + ++ G
Sbjct: 449 GFTDIRRLSGLLDRDLVDEGDRYTTLAGYALWHLGHLPVGGESFTADGFDFTIEAMSGRH 508
Query: 434 IKRLK 438
+++++
Sbjct: 509 VEKVR 513
>ref|NP_405328.1| (NC_003143) putative membrane protein [Yersinia pestis]
emb|CAC90578.1| (AJ414150) putative membrane protein [Yersinia pestis]
Length = 464
Score = 91.3 bits (225), Expect = 2e-17
Identities = 67/233 (28%), Positives = 111/233 (46%), Gaps = 12/233 (5%)
Query: 214 EGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNI 273
E +I + S + +MTPR ++ +D S E + +L + +P C+ S D I
Sbjct: 232 ERYMISGVLTLASRSLRSVMTPRTEISWVDCNRSQAEIREQLLDTPHSLFPVCRDSLDQI 291
Query: 274 IGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYG 333
IG+V +DLL + DF I+VP++ + +L ++K + +V DE+G
Sbjct: 292 IGVVRAKDLLVAIERGESICDF-AATTPPIVVPDTMDVINLLGVLRKAKGRLVVVNDEFG 350
Query: 334 GTAGLLTMEDIIEEIMGEISDE---YDLKQEGINKLEEGVFELEGMLDLESVEEALHIE- 389
GL+T D++E I GE DE D+ +G L ++G DL S+E+AL +
Sbjct: 351 VVQGLVTPLDVLEAIAGEFPDEDETPDIIADGDGWL------VKGGADLHSLEQALDCQT 404
Query: 390 -FDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVK 441
+ +L G + S MP GD I H F+++ V RI+ ++ K
Sbjct: 405 LVSPTADYASLAGLLLSHSGHMPTAGDVIELHNLRFQIMDVSDYRIELVRITK 457
>ref|NP_218468.1| (NC_000919) hemolysin, putative [Treponema pallidum]
pir||F71374 probable hemolysin - syphilis spirochete
gb|AAC65024.1| (AE001188) hemolysin, putative [Treponema pallidum]
Length = 453
Score = 90.5 bits (223), Expect = 4e-17
Identities = 80/350 (22%), Positives = 140/350 (39%), Gaps = 40/350 (11%)
Query: 115 SMSVVIAFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIA 174
+ SV A +++T + ++ GE+ PK+L S ++ A L + + + YP + +
Sbjct: 89 AQSVWKALVAVTCVIILCGEMFPKALGARYSLGFLMWIAPFLQLSYWLLYPCACVSSALM 148
Query: 175 HFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMT 234
H GI H S EE+K ++ REG+I S E ++ + A F +M
Sbjct: 149 HVL---EGIFLPRHTTCLSREEIKTLIAVGAREGVISSTENQLFQRALQFKRIPLAHVMV 205
Query: 235 PRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPK--- 291
P V + ++ D F++ + + G VH D+ S P
Sbjct: 206 PHTHFVSVFQDTPLSHVWDAFRTCSFSQL-LVHDAAGIVWGFVHYWDIFGESKVLPSQSS 264
Query: 292 --------------MHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAG 337
+H + +++ VP A + +L + + ALV+DE G G
Sbjct: 265 DQMVSACVANTRAAVHRVGDLAQELCCVPNVADLFSVLDMLSVSKQQMALVVDERGDGEG 324
Query: 338 LLTMEDIIEEIMGEIS------DEYDLKQEGINKLEE----------GVFEL--EGMLDL 379
L+TM DI+E I G ++ + Y + + ++ + G E+ G + L
Sbjct: 325 LVTMTDIMEVIFGSLAGVSEGVEGYTVHGSMVQRMSKPRVDFQMKSVGTHEILCSGTVPL 384
Query: 380 ESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSV 429
E E L T+GG + R+P GD +V G F++ V
Sbjct: 385 EYFNEVLGTRLQSRVYH-TVGGLLLERFGRLPTVGDELVIEGLRFKIRRV 433
>sp|Q48445|YC19_KLEPN Hypothetical protein in CPS region (ORF19)
dbj|BAA21009.1| (D21242) ORF19 [Klebsiella pneumoniae]
Length = 320
Score = 90.1 bits (222), Expect = 5e-17
Identities = 57/219 (26%), Positives = 111/219 (50%), Gaps = 6/219 (2%)
Query: 200 IVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGH 259
+V + + + + E +I+ + + S IMT R D+ ++ EE +V K
Sbjct: 88 LVADQDQHPLFNPQERLMIERVLNLNQRSVSSIMTSRHDIERINLSAPEEEIRSLVEKNQ 147
Query: 260 FTRYPYCKGSKDN--IIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIK 317
TR G KDN ++G+VH+ DLL +S+ + D +VR+ ++ PE + L +
Sbjct: 148 HTRL-VVTGGKDNEDLLGVVHVIDLLQQSLRQEPL-DLQALVRQPLVFPEGLPLLSALEQ 205
Query: 318 MKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDL--KQEGINKLEEGVFELEG 375
++ + H A V+DE+G G++T+ D++E I G + +E + + I ++G + + G
Sbjct: 206 FRQARTHFAFVVDEFGSVEGIVTLSDVMETIAGNLPNEVEEIDARHDIQHHQDGSWTVNG 265
Query: 376 MLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEG 414
+ LE + + + + D + E T+ G + L+ +P G
Sbjct: 266 HMPLEDLVQYVPLPLDDKREYHTVAGLLMEYLQHVPQWG 304
>ref|NP_219761.1| (NC_000117) Hypothetical protein containing CBS domains [Chlamydia
trachomatis]
pir||B71538 probable hypothetical protein containing cbs domains - Chlamydia
trachomatis (serotype D, strain UW3/Cx)
gb|AAC67849.1| (AE001298) Hypothetical protein containing CBS domains [Chlamydia
trachomatis]
Length = 414
Score = 85.1 bits (209), Expect = 2e-15
Identities = 70/313 (22%), Positives = 131/313 (41%), Gaps = 7/313 (2%)
Query: 128 LHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKE 187
L +VLGEIVPK +AI + + + F P+ +F ++KM ++
Sbjct: 98 LTLVLGEIVPKVIAIPYNARIAKIVTPIIFASTKSFRPIFDWAISGINFIVQKM--LARQ 155
Query: 188 HDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENS 247
+ELK ++ G+++ E ++ + S KE MTP+++++ D
Sbjct: 156 ESDFIQPQELKEVLRSCKDFGVVNHEESRLLFGYLSMEEGSIKERMTPKQEIIFYDVLTP 215
Query: 248 YEENIDIVL--KGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIV 305
E + K +++ CKG N++G+ + LL + ++RK +
Sbjct: 216 IENLYKLFSGPKQSYSKVLVCKGGLQNLLGVCSAKLLLLYKEKLQSAEELLPLLRKPHYI 275
Query: 306 PESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIM-GEISDEYDLKQEGIN 364
PE+ S L + E ++IDEYG GL+T D+ + + G + KQ
Sbjct: 276 PETVSAKTALYHLAGEDCGLGIIIDEYGSIEGLITQNDLFKIVSDGVAHNRPSFKQ--FA 333
Query: 365 KLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSF 424
++ V G +L + ++ VT+GG++ L +P G + F
Sbjct: 334 HSDKNVVIAAGTYELSDFYDLFGVDLPTTANCVTIGGWLTEQLGEIPETGTKFAWGQFVF 393
Query: 425 EVLSVDGARIKRL 437
++L +KR+
Sbjct: 394 QILDAAPNCVKRV 406
>ref|NP_456335.1| (NC_003198) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD05511.1| (AL627272) putative membrane protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 519
Score = 80.5 bits (197), Expect = 4e-14
Identities = 64/249 (25%), Positives = 117/249 (46%), Gaps = 10/249 (4%)
Query: 204 SLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRY 263
S+ EG E +I + S + IMTPR ++ +D S E +L + +
Sbjct: 275 SVSEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLSVAEIRQQLLSSPHSLF 334
Query: 264 PYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRK--MIIVPESASISQILIKMKKE 321
P C+G D IIG+V ++LL + + D I I+VPE+ +L +++
Sbjct: 335 PVCRGELDEIIGIVRAKELL---VALEEGADVAAIAASSPAIVVPETLDPINLLGVLRRA 391
Query: 322 QIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLES 381
+ +V +E+G GL+T D++E I GE D D E + E + ++G DL +
Sbjct: 392 RGSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDA-DETPEIVADAEGWI--VKGGTDLHA 448
Query: 382 VEEALHIE--FDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKA 439
+++AL ++ ++E + T+ G V + +P GD I ++ + R+ ++
Sbjct: 449 LQQALEVDHLVNEEGDIATVAGLVIAANGHIPRVGDVIDVPPLRITIVEANDYRVDLVRI 508
Query: 440 VKQDQGENE 448
VK+ +E
Sbjct: 509 VKEQPAHDE 517
>gb|AAD31439.1|AF130857_3 (AF130857) CorB [Salmonella typhimurium]
Length = 227
Score = 79.7 bits (195), Expect = 6e-14
Identities = 52/215 (24%), Positives = 105/215 (48%), Gaps = 8/215 (3%)
Query: 231 EIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRD----LLSRS 286
+IM PR +++ +D + ++ + R + S D+ I M+ +R+ + +
Sbjct: 5 DIMVPRNEIIGIDINDDWKSIERQLTHSPHGRIVLYRDSLDDAISMLRVREAWRLMAEKK 64
Query: 287 IFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIE 346
FT +M + ++ VPE +S LIK ++ + LV++EYG GL+T+EDI+E
Sbjct: 65 EFTKEM--MLRAADEIYYVPEGTPLSTQLIKFQRNKKKVGLVVNEYGDIQGLVTVEDILE 122
Query: 347 EIMGEISDEYD-LKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFS 405
EI+G+ + E + +G ++G ++ + +A + ++ + T+ G +
Sbjct: 123 EIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPED-DARTVNGVILE 181
Query: 406 LLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAV 440
LE +P+ G + Y ++L V I ++K V
Sbjct: 182 ALEEIPVAGTRVRIEQYDIDILDVQENMINQVKVV 216
>pir||H65039 hypothetical protein in grpE 3' region - Escherichia coli (strain
K-12)
gb|AAC75662.1| (AE000347) putative transport protein [Escherichia coli K12]
Length = 227
Score = 78.6 bits (192), Expect = 1e-13
Identities = 50/213 (23%), Positives = 105/213 (48%), Gaps = 8/213 (3%)
Query: 231 EIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRD----LLSRS 286
+IM PR +++ +D + ++ + + R + S D+ I M+ +R+ + +
Sbjct: 5 DIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKK 64
Query: 287 IFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIE 346
FT + + ++ VPE +S L+K ++ + LV++EYG GL+T+EDI+E
Sbjct: 65 EFTKET--MLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILE 122
Query: 347 EIMGEISDEYD-LKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFS 405
EI+G+ + E + +G ++G ++ + +A + ++ + T+ G +
Sbjct: 123 EIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPED-DARTVNGVILE 181
Query: 406 LLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
LE +P+ G + Y ++L V IK++K
Sbjct: 182 ALEEIPVAGTRVRIGEYDIDILDVQDNMIKQVK 214
>gb|AAG57723.1|AE005491_3 (AE005491) putative transport protein [Escherichia coli O157:H7
EDL933]
Length = 227
Score = 78.2 bits (191), Expect = 2e-13
Identities = 50/213 (23%), Positives = 105/213 (48%), Gaps = 8/213 (3%)
Query: 231 EIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRD----LLSRS 286
+IM PR +++ +D + ++ + + R + S D+ I M+ +R+ + +
Sbjct: 5 DIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKK 64
Query: 287 IFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIE 346
FT + + ++ VPE +S L+K ++ + LV++EYG GL+T+EDI+E
Sbjct: 65 EFTKET--MLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILE 122
Query: 347 EIMGEISDEYD-LKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGYVFS 405
EI+G+ + E + +G ++G ++ + +A + ++ + T+ G +
Sbjct: 123 EIVGDFTTSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPED-DARTVNGVILE 181
Query: 406 LLERMPMEGDTIVSHGYSFEVLSVDGARIKRLK 438
LE +P+ G + Y ++L V IK++K
Sbjct: 182 ALEEIPVVGTRVRIGEYDIDILDVQDNMIKQVK 214
>ref|NP_310552.1| (NC_002695) putative transport protein [Escherichia coli O157:H7]
ref|NP_416330.1| (NC_000913) putative transport protein [Escherichia coli K12]
sp|P76262|YOAE_ECOLI Hypothetical protein yoaE
pir||H64942 hypothetical protein b1816 - Escherichia coli (strain K-12)
dbj|BAA15623.1| (D90825) ORF_ID:o334#8; similar to [SwissProt Accession Number
P43932] [Escherichia coli]
dbj|BAA15628.1| (D90826) ORF_ID:o334#8; similar to [SwissProt Accession Number
P43932] [Escherichia coli]
gb|AAC74886.1| (AE000276) putative transport protein [Escherichia coli K12]
dbj|BAB35948.1| (AP002558) putative transport protein [Escherichia coli O157:H7]
Length = 518
Score = 78.2 bits (191), Expect = 2e-13
Identities = 64/245 (26%), Positives = 115/245 (46%), Gaps = 9/245 (3%)
Query: 207 EGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYC 266
EG E +I + S + IMTPR ++ +D +E + +L + +P C
Sbjct: 278 EGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQLLSSPHSLFPVC 337
Query: 267 KGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI--VRKMIIVPESASISQILIKMKKEQIH 324
+G D IIG+V ++LL + + D I IIVPE+ +L +++ +
Sbjct: 338 RGELDEIIGIVRAKELL---VALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGS 394
Query: 325 TALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEE 384
+V +E+G GL+T D++E I GE D D E I + + ++G DL ++++
Sbjct: 395 FVIVTNEFGVVQGLVTPLDVLEAIAGEFPDA-DETPEIIT--DGDGWLVKGGTDLHALQQ 451
Query: 385 ALHIEFDKECEQV-TLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVKQD 443
AL +E + + + T+ G V S +P GD I ++ + R+ ++ VK+
Sbjct: 452 ALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQ 511
Query: 444 QGENE 448
+E
Sbjct: 512 PAHDE 516
>ref|NP_288252.1| (NC_002655) putative transport protein [Escherichia coli O157:H7
EDL933]
gb|AAG56805.1|AE005404_8 (AE005404) putative transport protein [Escherichia coli O157:H7
EDL933]
Length = 518
Score = 77.4 bits (189), Expect = 3e-13
Identities = 64/245 (26%), Positives = 114/245 (46%), Gaps = 9/245 (3%)
Query: 207 EGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYC 266
EG E +I + S + IMTPR ++ +D +E + L + +P C
Sbjct: 278 EGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLGVDEIREQXLSSPHSLFPVC 337
Query: 267 KGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQI--VRKMIIVPESASISQILIKMKKEQIH 324
+G D IIG+V ++LL + + D I IIVPE+ +L +++ +
Sbjct: 338 RGELDEIIGIVRAKELL---VALEEGVDVAAIASASPAIIVPETLDPINLLGVLRRARGS 394
Query: 325 TALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEE 384
+V +E+G GL+T D++E I GE D D E I + + ++G DL ++++
Sbjct: 395 FVIVTNEFGVVQGLVTPLDVLEAIAGEFPDA-DETPEIIT--DGDGWLVKGGTDLHALQQ 451
Query: 385 ALHIEFDKECEQV-TLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKAVKQD 443
AL +E + + + T+ G V S +P GD I ++ + R+ ++ VK+
Sbjct: 452 ALDVEHLADDDDIATVAGLVISANGHIPRVGDVIDVGPLHITIIEANDYRVDLVRIVKEQ 511
Query: 444 QGENE 448
+E
Sbjct: 512 PAHDE 516
>ref|NP_229927.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||F82343 conserved hypothetical protein VC0271 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF93446.1| (AE004115) conserved hypothetical protein [Vibrio cholerae]
Length = 352
Score = 77.4 bits (189), Expect = 3e-13
Identities = 82/345 (23%), Positives = 150/345 (42%), Gaps = 26/345 (7%)
Query: 16 LMLMVAFLLVLLNAFFVLS--EFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSA 73
+ L+ ++ V + F+ S E L+ + + L +L + G+ A + +D L++
Sbjct: 1 MFLLAIYISVAIGVSFICSVLEAVLLSITPSYLAQLRQQGHPAANRLAGLKADIDRPLAS 60
Query: 74 TQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLG 133
+TL+++A +G A +F S L + A L++ L VL
Sbjct: 61 I---LTLNTIA-HTIGAATAGAQAAVVFGSQWL----------GLFSAVLTLGIL--VLS 104
Query: 134 EIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHS 193
EIVPK++ + A+ L P V + I +K+ PK D
Sbjct: 105 EIVPKTIGATYWRELAPQASLVLRWMVWALTPFVWFSEQITKRLARKVEA-PKLRD---- 159
Query: 194 EEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENID 253
E+ + + G E +++ N + ++MTPR + + + + +E I+
Sbjct: 160 --EISAMAMLANENGEFAEGESKMLNNLLAIQNVPVTQVMTPRPVLFRVSADLTIDEFIE 217
Query: 254 IVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQ 313
F+R KDNI+G VH +L ++R + +V + S+ +
Sbjct: 218 QHRDTPFSRPLIYSEEKDNIVGFVHRLELFKEQQNGQGNLLLGDVMRPIHVVLNTLSLPK 277
Query: 314 ILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMG-EISDEYD 357
+M ++++ ++V+DEYG GLLT+EDI E ++G EI DE D
Sbjct: 278 AFDQMMQKRLQLSVVVDEYGSVQGLLTLEDIFEHLLGEEIIDEAD 322
>gb|AAF33142.1|AF196836_1 (AF196836) putative hemolysin [Candida glabrata]
Length = 508
Score = 76.6 bits (187), Expect = 5e-13
Identities = 72/250 (28%), Positives = 122/250 (48%), Gaps = 23/250 (9%)
Query: 121 AFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKK 180
A +S T L VV GEI+P+S+ + + F A + V + YPV ++ + L
Sbjct: 143 AVISSTILIVVFGEIIPQSICVKYGLEVGAFFAPFVLVLMYLMYPVAYPIALLLDYIL-- 200
Query: 181 MGINPKEHDGTHSEEELKIIVGESLREGI--IDSVEGEIIKNAXDFSDTSAKEIMTPRKD 238
++H + + LK +V G+ + + E II D D KEIMTP ++
Sbjct: 201 ----GEDHGTVYKKSGLKTLVTLHQTMGVERLTTDEVTIISAVLDLKDKKVKEIMTPIEN 256
Query: 239 MVCLDEENSYEE-NIDIVLKGHFTRYP-YCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFN 296
+ L + +E I+ + F+R P + N IGM+ +R L+S + P+ D
Sbjct: 257 VFTLSADKILDEKTIEEIFNSGFSRIPIHLPNEPMNFIGMLIVRILIS---YDPE--DAL 311
Query: 297 QIVR-KMIIVPESA---SISQILIKMKKEQIHTALVIDEYG---GTAGLLTMEDIIEEIM 349
I + +PE++ S IL ++ + H +V + G G+ G++T+ED+IEE++
Sbjct: 312 PISSFPLATLPETSPNTSCLNILNYFQEGKSHMCIVSERPGSSNGSIGVVTLEDVIEELI 371
Query: 350 G-EISDEYDL 358
G EI DE D+
Sbjct: 372 GEEIVDESDV 381
>ref|NP_296905.1| (NC_002620) conserved hypothetical protein [Chlamydia muridarum]
pir||E81693 conserved hypothetical protein TC0528 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39370.1| (AE002321) conserved hypothetical protein [Chlamydia muridarum]
Length = 404
Score = 75.9 bits (185), Expect = 9e-13
Identities = 90/433 (20%), Positives = 173/433 (39%), Gaps = 37/433 (8%)
Query: 9 LDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLD 68
++ L V + + + FF + E A V + RL+ + N A + +R
Sbjct: 1 METDSPFFWLGVNLVCIFVQGFFSMMEMACVSFNRVRLQYYLTKSNKKASYINFLIRRPY 60
Query: 69 TYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFL 128
LG+ ++ L +G +LL P + + + FL
Sbjct: 61 RLFGTVMLGVNIA-LQVGSEASRTCYRLLGI---------PPEYAPATQI--------FL 102
Query: 129 HVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH 188
V+ E++P +++ EK L A L+ +FYP+++ I + I +
Sbjct: 103 VVIFAELLPLAISRKIPEKIALKGAPILYCAHYLFYPLIQSVGGITSMIYFLLNIKEETL 162
Query: 189 DGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSY 248
T S +EL+ ++L + I N S TS ++I + L S
Sbjct: 163 HSTLSRDELQ----KTLETHHEEQDFNVIATNIFSLSATSVEQICQYLDQIPMLSATASV 218
Query: 249 EENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPES 308
++ IV + P K NI+G+ ++L++R+ P + N V
Sbjct: 219 QDFCQIVRRHRLDFVPVYHKVKKNIVGIAFPKNLINRNPNDPIVPYLN----SPWFVTAK 274
Query: 309 ASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIM--GEISDEYDLKQEGINKL 366
+ + ++ + +K + A+V++++G G L + + + + G I+ K + + +
Sbjct: 275 SKLIHVIQEFRKNSSNVAIVLNDHGEPMGALGLHTVFKTLFNTGNIAQS---KPKTASLI 331
Query: 367 EEGVFELEGMLDLESVEEALHIEF-DKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFE 425
E G L +E L+I F D ECE T+ + LL+ P G +I+ +G E
Sbjct: 332 ER---TFSGNTPLSEIENELNISFSDNECE--TIAQLMLKLLDTPPEVGASIIINGLLLE 386
Query: 426 VLSVDGARIKRLK 438
V + + IK ++
Sbjct: 387 VKEISLSGIKTIE 399
>ref|NP_460784.1| (NC_003197) putative inner membrane protein [Salmonella typhimurium
LT2]
gb|AAL20743.1| (AE008781) putative inner membrane protein [Salmonella typhimurium
LT2]
Length = 518
Score = 75.5 bits (184), Expect = 1e-12
Identities = 64/249 (25%), Positives = 116/249 (45%), Gaps = 11/249 (4%)
Query: 204 SLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRY 263
S+ EG E +I + S + IMTPR ++ +D S E +L + +
Sbjct: 275 SVSEGAFAEEERYMINGVLTLASRSLRGIMTPRGEISWVDANLSVAEIRQQLLSSPHSLF 334
Query: 264 PYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRK--MIIVPESASISQILIKMKKE 321
P C+G D IIG+V ++LL + + D I I+VPE+ L+ + +
Sbjct: 335 PVCRGELDEIIGIVRAKELL---VALEEGADVAAIAASSPAIVVPETLDPIN-LLGVLRA 390
Query: 322 QIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLES 381
+ +V +E+G GL+T D++E I GE D D E + E + ++G DL +
Sbjct: 391 RGSFVIVTNEFGVVQGLVTPLDVLEAIAGEFPDA-DETPEIVADAEGWI--VKGGTDLHA 447
Query: 382 VEEALHIE--FDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVLSVDGARIKRLKA 439
+++AL ++ ++E + T+ G V + +P GD I ++ + R+ ++
Sbjct: 448 LQQALEVDHLVNEEGDIATVAGLVIAANGHIPRVGDVIDVPPLRITIVEANDYRVDLVRI 507
Query: 440 VKQDQGENE 448
VK+ +E
Sbjct: 508 VKEQPAHDE 516
>ref|NP_224595.1| (NC_000922) CT257 hypothetical protein [Chlamydophila pneumoniae
CWL029]
ref|NP_300452.1| (NC_002491) CT257 hypothetical protein [Chlamydophila pneumoniae
J138]
ref|NP_444908.1| (NC_002179) conserved hypothetical protein [Chlamydophila
pneumoniae AR39]
pir||A72085 conserved hypothetical protein CP0360 [imported] - Chlamydophila
pneumoniae (strains CWL029 and AR39)
gb|AAD18538.1| (AE001623) CT257 hypothetical protein [Chlamydophila pneumoniae
CWL029]
gb|AAF38209.1| (AE002198) conserved hypothetical protein [Chlamydophila pneumoniae
AR39]
dbj|BAA98603.1| (AP002546) CT257 hypothetical protein [Chlamydophila pneumoniae
J138]
Length = 404
Score = 70.5 bits (171), Expect = 4e-11
Identities = 78/429 (18%), Positives = 182/429 (42%), Gaps = 33/429 (7%)
Query: 12 SESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYL 71
+ ++ + V + ++L F+ + E A V + RL+ + + A+ + +R
Sbjct: 3 NSALFWIGVNIICIVLQGFYSMMEMACVSFNRVRLQYYLTKDHKKARYINFLIRRPYRLF 62
Query: 72 SATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVV 131
LG+ ++ VG + AL + D A + F+ V+
Sbjct: 63 GTVMLGVNIALQ----VGSESSRNCYRALGITPDY--------------APFTQIFIVVI 104
Query: 132 LGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHDGT 191
E++P +++ EK L+ A L+ +FYP+++L + + I ++ + T
Sbjct: 105 FAELLPLTISRKIPEKLALWGAPILYYSHYIFYPLIQLIGSLTEGLYYLLNIRKEKLNST 164
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
S +E + ++L + I N S T A ++ P + + L + ++
Sbjct: 165 LSRDEFQ----KALETHHEEQDFNTIATNIFSLSATCADQVCQPLEQVTMLPSSANVKDF 220
Query: 252 IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASI 311
+ P ++ N+IG+ H +D +++++ P +++ + + + +
Sbjct: 221 CRTIKNTDINFIPVYHKARKNVIGIAHPKDFVNKALDEPLINN----LHSPWFITAKSKL 276
Query: 312 SQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEEGVF 371
+IL + + + A+V++ G G+L++ I +I+ ++ LK + I+ +E
Sbjct: 277 IRILKEFRDNRSSVAVVLNASGEPIGILSLNAIF-KILFNTTNIAHLKPKTISVIER--- 332
Query: 372 ELEGMLDLESVEEALHIEFDKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEV--LSV 429
G ++ +++ L I+F + + TL V LL+ G +++ + EV +S+
Sbjct: 333 TFPGNSRIKDLQKELDIQFPQYPVE-TLAQLVLQLLDSPAEVGTSVIINNLLLEVKEMSL 391
Query: 430 DGARIKRLK 438
G + +K
Sbjct: 392 SGIKTVSIK 400
>ref|NP_014581.1| (NC_001147) Product of gene unknown; Mam3p [Saccharomyces
cerevisiae]
pir||S61717 probable membrane protein YOL060c - yeast (Saccharomyces
cerevisiae)
emb|CAA62524.1| (X91067) 01216; hypothetical protein [Saccharomyces cerevisiae]
emb|CAA99069.1| (Z74802) ORF YOL060c [Saccharomyces cerevisiae]
Length = 706
Score = 68.6 bits (166), Expect = 1e-10
Identities = 67/250 (26%), Positives = 117/250 (46%), Gaps = 23/250 (9%)
Query: 121 AFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKK 180
A +S T L V+ GEI+P+S+ + + F + V + YPV + + L +
Sbjct: 151 AVVSSTILIVIFGEIIPQSVCVKYGLQVGAFFCPFVLVLMYLMYPVAYPIATLLDYMLGE 210
Query: 181 MGINPKEHDGTHSEEELKIIVGESLREGI--IDSVEGEIIKNAXDFSDTSAKEIMTPRKD 238
+H + + LK +V G+ + E II D +EIMTP ++
Sbjct: 211 ------DHGTMYKKSGLKTLVTLHRTMGVERLTKDEVTIISAVLDLKAKRVEEIMTPIEN 264
Query: 239 MVCLDEENSYEEN-IDIVLKGHFTRYP-YCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFN 296
+ + + ++ ++ + F+R P + +N IGM+ +R L+S + P D
Sbjct: 265 VFTMSADTILDDKTVEKIFNSGFSRIPIFLPNEPNNFIGMLLVRVLIS---YDPD--DCL 319
Query: 297 QIVR-KMIIVPESA---SISQILIKMKKEQIHTALVIDEYG---GTAGLLTMEDIIEEIM 349
I + +PE++ S IL ++ + H +V E G G G+LT+ED+IEE++
Sbjct: 320 PISHFPLATLPETSPNTSCLNILNYFQEGKAHMCVVSKEPGSSHGAIGVLTLEDVIEELI 379
Query: 350 G-EISDEYDL 358
G EI DE D+
Sbjct: 380 GEEIVDESDV 389
>ref|NP_503052.1| (NM_070651) C52D10.12.p [Caenorhabditis elegans]
gb|AAK77203.1|AC006622_3 (AC006622) Hypothetical protein C52D10.12 [Caenorhabditis elegans]
Length = 811
Score = 68.6 bits (166), Expect = 1e-10
Identities = 91/370 (24%), Positives = 165/370 (44%), Gaps = 64/370 (17%)
Query: 24 LVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQLG-ITLSS 82
L+ L+A F L+ + LE ++K G A+K + L + G + L S
Sbjct: 211 LLCLSALFSGLTLGLMSLTPQELELVIKSG------AIKEQKCAAKILPVRKKGNLLLCS 264
Query: 83 LALGWV-GEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLA 141
L LG V AI+ L+ L + A + T V+ GEI+P+S+
Sbjct: 265 LLLGNVIVNSAISILMGELTTG---------------IYALIGSTMGIVIFGEILPQSIC 309
Query: 142 IAKSEK--ATLFAARPLHVF--WVVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEEL 197
+ K + A + L +F + + +PV +L D + +G + +D E +
Sbjct: 310 VKKGLEVGAHTISITQLFIFLTFPIAWPVSKLLDCL-------LGDEYQAYDRKRLMELI 362
Query: 198 KIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE-ENIDIVL 256
K+ + ++ + S E +I A + +D K++MT +D+ L + + + ++
Sbjct: 363 KMSITDNGQV----SNELKIAVGAMEIADKVVKDVMTKIEDVFMLPDTTVLNAKTVMEIV 418
Query: 257 KGHFTRYP-YCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMI--------IVPE 307
K +TR P Y G K+N+ M+ ++DL ++ P D N V+ + V
Sbjct: 419 KMGYTRIPVYQYGDKNNVTDMLFVKDL---ALLDP---DDNFTVKTVCGYHKHPVKFVMN 472
Query: 308 SASISQILIKMKKEQIHTALVI---------DEYGGTAGLLTMEDIIEEIM-GEISDEYD 357
+ +L KK + H A+V D G++T+EDI+EEI+ EI+DE+D
Sbjct: 473 DTPLPNLLEAFKKGEGHLAMVKRLINTDDKHDPSYVLVGVVTLEDIVEEILQAEINDEFD 532
Query: 358 LKQEGINKLE 367
+ + +NK++
Sbjct: 533 IVSDNVNKVK 542
>ref|NP_219372.1| (NC_000919) hemolysin, putative [Treponema pallidum]
pir||D71262 probable hemolysin - syphilis spirochete
gb|AAC65893.1| (AE001262) hemolysin, putative [Treponema pallidum]
Length = 357
Score = 67.4 bits (163), Expect = 3e-10
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 2/143 (1%)
Query: 297 QIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEY 356
+IV++ I VPE S+ ++L ++ Q A VIDEYGG G++T +++I + E +
Sbjct: 171 RIVQQPIFVPEVISVRKLLHLFQQMQAQMAFVIDEYGGIEGMVTRDELIMRCVQEYARAD 230
Query: 357 DLKQEGINKLEEGVFELEGMLDLESVEE--ALHIEFDKECEQVTLGGYVFSLLERMPMEG 414
+ E + +G + + G ++L + L T+ GYV S+ R+P
Sbjct: 231 GINSEDCFQNPDGSWIVSGWMNLNEMYRLGVLARTTRPHTGVHTIAGYVLSIRNRIPRVK 290
Query: 415 DTIVSHGYSFEVLSVDGARIKRL 437
+ + ++G F +L +DG RI RL
Sbjct: 291 EQLNANGCRFTILKMDGRRIDRL 313
>pir||G65039 hypothetical protein b2612 - Escherichia coli (strain K-12)
gb|AAC75661.1| (AE000347) orf, hypothetical protein [Escherichia coli K12]
Length = 196
Score = 67.0 bits (162), Expect = 4e-10
Identities = 51/189 (26%), Positives = 94/189 (48%), Gaps = 17/189 (8%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
M+++ ++V+++A+F SE ++ + + RL + K GN +AK K+ ++ D +S +
Sbjct: 1 MIIILIIMVVISAYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLI 60
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
G L ++ L +AL + +R V IA +TF+ +V E++
Sbjct: 61 GNNLVNI------------LASALGTIVGMR----LYGDAGVAIATGVLTFVVLVFAEVL 104
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEE 195
PK++A EK ++ L ++ P+V L + I ++ MGI G+ S+E
Sbjct: 105 PKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKE 164
Query: 196 ELKIIVGES 204
EL+ IV ES
Sbjct: 165 ELRTIVHES 173
>ref|NP_219762.1| (NC_000117) hypothetical protein [Chlamydia trachomatis]
pir||C71538 hypothetical protein CT257 - Chlamydia trachomatis (serotype D,
strain UW3/Cx)
gb|AAC67850.1| (AE001298) hypothetical protein [Chlamydia trachomatis]
Length = 404
Score = 64.3 bits (155), Expect = 3e-09
Identities = 80/428 (18%), Positives = 166/428 (38%), Gaps = 33/428 (7%)
Query: 9 LDPSESILMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLD 68
++ + L V L + + FF + E A + + RL+ + N A + +R
Sbjct: 1 METNSPFFWLGVNLLCIFVQGFFSMMEMACISFNRVRLQYYLTKSNKKASYINFLVRRPY 60
Query: 69 TYLSATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFL 128
LG+ ++ L +G KLL +P + + +++
Sbjct: 61 RLFGTVMLGVNIA-LQIGSESSRTCYKLLGI---------SPEYAPATQIILV------- 103
Query: 129 HVVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEH 188
V+ E++P +++ EK L A L+ +FYP+++ I + + I +
Sbjct: 104 -VIFAELIPLAISRKIPEKIALKGAPILYFAHYLFYPLIQCVGGITNMIYFILNIKEETL 162
Query: 189 DGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSY 248
T S +EL+ ++L + I N S TS +++ + L S
Sbjct: 163 HSTLSRDELQ----KTLETHHEEHDFNVIATNIFSLSATSVEQVCQYLDQIPILSATASV 218
Query: 249 EENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPES 308
+ +V + P K N++G+ ++L++R+ P + + +
Sbjct: 219 RDVCQLVRRHRLDFVPVYHKVKKNVVGIAFPKNLINRNPSDPVV----PYLSSPWFITAK 274
Query: 309 ASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEEIMGEISDEYDLKQEGINKLEE 368
+ + + + +K + A+V++ G G+L + + + + + LK + + +E
Sbjct: 275 SKLIHAIQEFRKNSSNVAIVLNNNGEPMGVLGLHTVFKTLF-NTRNIAQLKPKPTSLIER 333
Query: 369 GVFELEGMLDLESVEEALHIEF-DKECEQVTLGGYVFSLLERMPMEGDTIVSHGYSFEVL 427
G L +E L I F D +C T+ + LL+ P G +I+ + EV
Sbjct: 334 ---TFSGNTPLSEIENELDIIFMDNDC--TTIEQLMLKLLDTPPEVGASIIINDLLLEVK 388
Query: 428 SVDGARIK 435
+ IK
Sbjct: 389 EISLYGIK 396
>ref|NP_588087.1| (NC_003421) conserved hypothetical protein [Schizosaccharomyces
pombe]
pir||T50445 conserved hypothetical protein SPCC4B3.03c [imported] - fission
yeast (Schizosaccharomyces pombe)
emb|CAB60677.1| (AL132870) conserved hypothetical protein [Schizosaccharomyces
pombe]
Length = 679
Score = 62.0 bits (149), Expect = 1e-08
Identities = 86/368 (23%), Positives = 163/368 (43%), Gaps = 66/368 (17%)
Query: 16 LMLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSN----AKLALKMSQRLDTYL 71
+ L+++ +L+LL F L+ L+ L + G+++ A+ LK+ +R ++
Sbjct: 64 MKLIISAVLILLGGVFAGLTIGLMGCDDLHLQVLEQSGDASERVHARKVLKLLRRGKHWV 123
Query: 72 SATQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVV 131
T L +G + + L +F+S+ P + S ++++ F
Sbjct: 124 LVTLL-----------LGNVIVNETLPIVFDSIIGGGWPAVLISTAMIVIF--------- 163
Query: 132 LGEIVPKSLAI-------AKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGIN 184
GE++P++ + AK E LF +++ W + YP + D
Sbjct: 164 -GEVIPQATCVRYGLSIGAKLEPIVLFM---MYLLWPIAYPTALILDACLG--------- 210
Query: 185 PKEHDGTHSEEELKIIVGESLREGI--IDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCL 242
+ + + LK +V GI ++ E II D + A+ IMTP +D+ L
Sbjct: 211 -ESQSTMYKKSGLKTLVTLHRDLGIDKLNQDEVTIITAVLDLREKHAESIMTPIEDVFTL 269
Query: 243 DEENSYEENI--DIVLKGHFTRYPYCK-GSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIV 299
+ +E++ +I+ G ++R P K G + IGM+ + L+ + P D V
Sbjct: 270 PMDRILDEDLIGEIICAG-YSRIPVHKPGFPHDFIGMLLTKTLIG---YDP---DDKWPV 322
Query: 300 RKMII--VPES---ASISQILIKMKKEQIHTALVIDEYG---GTAGLLTMEDIIEEIMG- 350
K + +P++ S +L ++ + H L+ + G G G++T+EDIIEE++G
Sbjct: 323 GKFALATLPQTWPNTSCLDLLNYCQEGKSHMILISNSPGEPHGAIGVITLEDIIEELIGE 382
Query: 351 EISDEYDL 358
EI DE D+
Sbjct: 383 EIIDETDV 390
>ref|NP_060119.2| (NM_017649) ancient conserved domain protein 2 [Homo sapiens]
gb|AAF86374.1| (AF216962) ancient conserved domain protein 2 [Homo sapiens]
Length = 633
Score = 61.6 bits (148), Expect = 2e-08
Identities = 64/284 (22%), Positives = 126/284 (43%), Gaps = 28/284 (9%)
Query: 117 SVVIAFLSITFLHVVLGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDV 172
S ++A + T V+ GEIVP+++ +A + + + YPV +L D
Sbjct: 98 SGLVAVVVSTIGIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDC 157
Query: 173 IAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEI 232
+ +E ++ E+L ++ + + E II+ A + + +++
Sbjct: 158 VLG----------QEIGTVYNREKLLEMLRVTDPYNDLVKEELNIIQGALELRTKTVEDV 207
Query: 233 MTPRKDMVCLDEENSYEEN-IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL--LSRSIFT 289
MTP +D + E + N + +++ +TR P +G + NI+ ++ ++DL + T
Sbjct: 208 MTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCT 267
Query: 290 PKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI--------DEYGGTAGLLTM 341
P + V + +L + KK + H A+V D + G++T+
Sbjct: 268 PLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVTL 327
Query: 342 EDIIEEIM-GEISDEYDLKQEGINKLEEGVFELEGMLDLESVEE 384
ED+IEEI+ EI DE DL + N+ ++ V E D + ++
Sbjct: 328 EDVIEEIIKSEILDETDLYTD--NRTKKKVAHRERKQDFSAFKQ 369
>dbj|BAB14585.1| (AK023479) unnamed protein product [Homo sapiens]
Length = 853
Score = 61.6 bits (148), Expect = 2e-08
Identities = 64/284 (22%), Positives = 126/284 (43%), Gaps = 28/284 (9%)
Query: 117 SVVIAFLSITFLHVVLGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDV 172
S ++A + T V+ GEIVP+++ +A + + + YPV +L D
Sbjct: 340 SGLVAVVVSTIGIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDC 399
Query: 173 IAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEI 232
+ +E ++ E+L ++ + + E II+ A + + +++
Sbjct: 400 VLG----------QEIGTVYNREKLLEMLRVTDPYNDLVKEELNIIQGALELRTKTVEDV 449
Query: 233 MTPRKDMVCLDEENSYEEN-IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL--LSRSIFT 289
MTP +D + E + N + +++ +TR P +G + NI+ ++ ++DL + T
Sbjct: 450 MTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCT 509
Query: 290 PKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI--------DEYGGTAGLLTM 341
P + V + +L + KK + H A+V D + G++T+
Sbjct: 510 PLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVTL 569
Query: 342 EDIIEEIM-GEISDEYDLKQEGINKLEEGVFELEGMLDLESVEE 384
ED+IEEI+ EI DE DL + N+ ++ V E D + ++
Sbjct: 570 EDVIEEIIKSEILDETDLYTD--NRTKKKVAHRERKQDFSAFKQ 611
>ref|XP_031972.2| (XM_031972) ancient conserved domain protein 2 [Homo sapiens]
Length = 875
Score = 61.6 bits (148), Expect = 2e-08
Identities = 64/284 (22%), Positives = 126/284 (43%), Gaps = 28/284 (9%)
Query: 117 SVVIAFLSITFLHVVLGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDV 172
S ++A + T V+ GEIVP+++ +A + + + YPV +L D
Sbjct: 340 SGLVAVVVSTIGIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDC 399
Query: 173 IAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEI 232
+ +E ++ E+L ++ + + E II+ A + + +++
Sbjct: 400 VLG----------QEIGTVYNREKLLEMLRVTDPYNDLVKEELNIIQGALELRTKTVEDV 449
Query: 233 MTPRKDMVCLDEENSYEEN-IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL--LSRSIFT 289
MTP +D + E + N + +++ +TR P +G + NI+ ++ ++DL + T
Sbjct: 450 MTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCT 509
Query: 290 PKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI--------DEYGGTAGLLTM 341
P + V + +L + KK + H A+V D + G++T+
Sbjct: 510 PLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVTL 569
Query: 342 EDIIEEIM-GEISDEYDLKQEGINKLEEGVFELEGMLDLESVEE 384
ED+IEEI+ EI DE DL + N+ ++ V E D + ++
Sbjct: 570 EDVIEEIIKSEILDETDLYTD--NRTKKKVAHRERKQDFSAFKQ 611
>ref|NP_291047.1| (NM_033569) cyclin M2; ancient conserved domain protein 2 [Mus
musculus]
gb|AAF86373.1| (AF216961) ancient conserved domain protein 2; mACDP2 [Mus
musculus]
Length = 693
Score = 61.6 bits (148), Expect = 2e-08
Identities = 64/284 (22%), Positives = 126/284 (43%), Gaps = 28/284 (9%)
Query: 117 SVVIAFLSITFLHVVLGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDV 172
S ++A + T V+ GEIVP+++ +A + + + YPV +L D
Sbjct: 158 SGLVAVVVSTIGIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDC 217
Query: 173 IAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEI 232
+ +E ++ E+L ++ + + E II+ A + + +++
Sbjct: 218 VLG----------QEIGTVYNREKLLEMLRVTDPYNDLVKEELNIIQGALELRTKTVEDV 267
Query: 233 MTPRKDMVCLDEENSYEEN-IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL--LSRSIFT 289
MTP +D + E + N + +++ +TR P +G + NI+ ++ ++DL + T
Sbjct: 268 MTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCT 327
Query: 290 PKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI--------DEYGGTAGLLTM 341
P + V + +L + KK + H A+V D + G++T+
Sbjct: 328 PLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVTL 387
Query: 342 EDIIEEIM-GEISDEYDLKQEGINKLEEGVFELEGMLDLESVEE 384
ED+IEEI+ EI DE DL + N+ ++ V E D + ++
Sbjct: 388 EDVIEEIIKSEILDETDLYTD--NRTKKKVAHRERKQDFSAFKQ 429
>dbj|BAB14386.1| (AK023066) unnamed protein product [Homo sapiens]
Length = 633
Score = 61.2 bits (147), Expect = 2e-08
Identities = 67/285 (23%), Positives = 127/285 (44%), Gaps = 30/285 (10%)
Query: 117 SVVIAFLSITFLHVVLGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDV 172
S ++A + T VV GEIVP+++ +A + + + YPV +L D
Sbjct: 98 SGLVAVVVSTIGIVVFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDC 157
Query: 173 IAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEI 232
+ +E ++ E+L ++ + + E II+ A + + +++
Sbjct: 158 VLG----------QEIGTVYNREKLLEMLRVTDPYNDLVKEELNIIQGALELRTKTVEDV 207
Query: 233 MTPRKDMVCLDEENSYEENI--DIVLKGHFTRYPYCKGSKDNIIGMVHIRDL--LSRSIF 288
MTP +D + E + N +I++ G +TR P +G + NI+ ++ ++DL +
Sbjct: 208 MTPLRDCFMITGEAILDFNTMSEIMVSG-YTRIPVFEGERSNIVDLLFVKDLAFVDPDDC 266
Query: 289 TPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI--------DEYGGTAGLLT 340
TP + V + +L + KK + H A+V D + G++T
Sbjct: 267 TPLKTITKFYNHPLHFVFNDTKLDAMLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVT 326
Query: 341 MEDIIEEIM-GEISDEYDLKQEGINKLEEGVFELEGMLDLESVEE 384
+ED+IEEI+ EI DE DL + N+ ++ V E D + ++
Sbjct: 327 LEDVIEEIIKSEILDETDLYTD--NRTKKKVAHRERKQDFSAFKQ 369
>gb|AAD31438.1|AF130857_2 (AF130857) CorF [Salmonella typhimurium]
Length = 196
Score = 58.9 bits (141), Expect = 1e-07
Identities = 48/189 (25%), Positives = 91/189 (47%), Gaps = 17/189 (8%)
Query: 17 MLMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLSATQL 76
M+++ ++V+ +F SE ++ + + RL + K GN +AK K+ ++ D +S +
Sbjct: 1 MIILIIMVVISAYYFSGSETGMMTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLI 60
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIV 136
G L ++ L +AL + +R + IA +TF+ +V E++
Sbjct: 61 GNNLVNI------------LASALGTIVGMR----LYGDAGLAIATGVLTFVVLVFAEVL 104
Query: 137 PKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPK-EHDGTHSEE 195
PK++A EK ++ L ++ P+V L + I ++ MGI G+ S+E
Sbjct: 105 PKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNTITRLLMRMMGIKTDIVVSGSLSKE 164
Query: 196 ELKIIVGES 204
+L+ IV ES
Sbjct: 165 QLRTIVHES 173
>ref|NP_171826.1| (NM_100209) unknown protein [Arabidopsis thaliana]
gb|AAC72127.1| (AC005278) Strong similarity to gi|2244780 hypothetical protein
from Arabidopsis thaliana chromosome 4 contig gb|Z97335
Length = 514
Score = 57.4 bits (137), Expect = 3e-07
Identities = 62/245 (25%), Positives = 114/245 (46%), Gaps = 18/245 (7%)
Query: 98 AALFESMDLRENPIFIHSMSVVIAFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLH 157
AA E++ + + IF ++V+ LS+TF+ + GEI+P+++ +
Sbjct: 102 AAAMEALPICLDKIFHPFVAVL---LSVTFV-LAFGEIIPQAICSRYGLAVGANFLWLVR 157
Query: 158 VFWVVFYP-------VVRLFDVIAHFFLKKMGINPKEHDGT-HSEEELKIIVG----ESL 205
+ ++ YP V+ L +++ F++ ++ H+ T +LK +V E+
Sbjct: 158 ILMIICYPIAYPIGKVMLLCLLLSTFYMPQVLDAVIGHNDTLFRRAQLKALVSIHSQEAG 217
Query: 206 REGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE-ENIDIVLKGHFTRYP 264
+ G + E II A D S +A+E MTP + LD + E I +L +R P
Sbjct: 218 KGGELTHEETMIISGALDLSQKTAEEAMTPIESTFSLDVNTKLDWETIGKILSRGHSRIP 277
Query: 265 YCKGSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIH 324
G+ NIIG++ ++ LL+ T + + +RK+ VP + IL + +K H
Sbjct: 278 VYLGNPKNIIGLLLVKSLLTVRAET-EAPVSSVSIRKIPRVPSDMPLYDILNEFQKGSSH 336
Query: 325 TALVI 329
A V+
Sbjct: 337 MAAVV 341
>dbj|BAB13418.1| (AB046812) KIAA1592 protein [Homo sapiens]
Length = 717
Score = 55.5 bits (132), Expect = 1e-06
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 30/260 (11%)
Query: 117 SVVIAFLSITFLHVVLGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDV 172
S ++A S T V+ GEI+P++L +A L + + + + +P+ +L D
Sbjct: 209 SGLMAVASSTIGIVIFGEILPQALCSRHGLAVGANTILLTKFFMLLTFPLSFPISKLLD- 267
Query: 173 IAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEI--IKNAXDFSDTSAK 230
FFL + E ++ E+L ++ + E D V+ E+ I+ A + + +
Sbjct: 268 ---FFLGQ------EIRTVYNREKLMEML--KVTEPYNDLVKEELNMIQGALELRTKTVE 316
Query: 231 EIMTPRKDMVCLDEENSYEEN-IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL--LSRSI 287
+IMT +D + + + N + +++ +TR P + + NI+ +++++DL +
Sbjct: 317 DIMTQLQDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDD 376
Query: 288 FTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI--------DEYGGTAGLL 339
TP + V + +L + KK + H A+V D + GL+
Sbjct: 377 CTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIVQKVNNEGEGDPFYEVLGLV 436
Query: 340 TMEDIIEEIM-GEISDEYDL 358
T+ED+IEEI+ EI DE D+
Sbjct: 437 TLEDVIEEIIKSEILDESDM 456
>gb|AAL91640.1| (AY075631) At1g47330/T3F24_2 [Arabidopsis thaliana]
Length = 527
Score = 55.5 bits (132), Expect = 1e-06
Identities = 58/237 (24%), Positives = 109/237 (45%), Gaps = 23/237 (9%)
Query: 103 SMDLRENPIFIHSMSV--VIAFLSITFLHVVLGEIVPKSLAIAKSEKATLFAARPLHVFW 160
SM + PIF+ + + LS+T + +V GEI+P+++ K A + V
Sbjct: 81 SMAMEALPIFLDKIVPPWLAILLSVTLI-LVFGEIMPQAVCTRYGLKVGAIMAPFVRVLL 139
Query: 161 VVFYPVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIV----GESLREGIIDSVEGE 216
V+F+P+ + + L K H ELK V E+ + G + + E
Sbjct: 140 VLFFPISYPISKVLDWML------GKGHGVLLRRAELKTFVNFHGNEAGKGGDLTTDETS 193
Query: 217 IIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE-ENIDIVLKGHFTRYPYCKGSKDNIIG 275
II A + ++ +AK+ MTP + L+ + E ++ ++ +R P + +IIG
Sbjct: 194 IITGALELTEKTAKDAMTPISNAFSLELDTPLNLETLNTIMSVGHSRVPVYFRNPTHIIG 253
Query: 276 MVHIRDLLS----RSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALV 328
++ +++LL+ + + KM +RK+ V E+ + IL + +K H A+V
Sbjct: 254 LILVKNLLAVDARKEVPLRKMS-----MRKIPRVSETMPLYDILNEFQKGHSHIAVV 305
>ref|NP_064569.1| (NM_020184) ancient conserved domain protein 4 [Homo sapiens]
gb|AAF86370.1| (AF202777) ancient conserved domain protein 4 [Homo sapiens]
Length = 631
Score = 55.1 bits (131), Expect = 2e-06
Identities = 63/260 (24%), Positives = 121/260 (46%), Gaps = 30/260 (11%)
Query: 117 SVVIAFLSITFLHVVLGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDV 172
S ++A S T V+ GEI+P++L +A L + + + + +P+ +L D
Sbjct: 123 SGLMAVASSTIGIVIFGEILPQALCSRHGLAVGANIILLTKFFMLLTFPLSFPISKLLD- 181
Query: 173 IAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEI--IKNAXDFSDTSAK 230
FFL + E ++ E+L ++ + E D V+ E+ I+ A + + +
Sbjct: 182 ---FFLGQ------EIRTVYNREKLMEML--KVTEPYNDLVKEELNMIQGALELRTKTVE 230
Query: 231 EIMTPRKDMVCLDEENSYEEN-IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL--LSRSI 287
+IMT +D + + + N + +++ +TR P + + NI+ +++++DL +
Sbjct: 231 DIMTQLQDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDD 290
Query: 288 FTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI--------DEYGGTAGLL 339
TP + V + +L + KK + H A+V D + GL+
Sbjct: 291 CTPLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIVQKVNNEGEGDPFYEVLGLV 350
Query: 340 TMEDIIEEIM-GEISDEYDL 358
T+ED+IEEI+ EI DE D+
Sbjct: 351 TLEDVIEEIIKSEILDESDM 370
>ref|NP_195096.1| (NM_119528) putative protein [Arabidopsis thaliana]
pir||T04987 hypothetical protein T16L1.190 - Arabidopsis thaliana
emb|CAA20583.1| (AL031394) putative protein [Arabidopsis thaliana]
emb|CAB80087.1| (AL161584) putative protein [Arabidopsis thaliana]
Length = 411
Score = 54.3 bits (129), Expect = 3e-06
Identities = 58/265 (21%), Positives = 117/265 (43%), Gaps = 23/265 (8%)
Query: 102 ESMDLRENPIFIHSMSVVIAFLSITFLHVVL-GEIVPKSLA----IAKSEKATLFAARPL 156
+ + + PIF+ + + I+ ++L GEI+P+S+ +A F +
Sbjct: 67 DDLSFQTLPIFLDGLVTAWGAILISVTLILLFGEIIPQSICSRYGLAIGATVAPFVRVLV 126
Query: 157 HVFWVVFYPVVRLFD-VIAHFFLKKMGINPKEHDGTHSEEELKIIV----GESLREGIID 211
+ V +P+ +L D ++ H ELK +V E+ + G +
Sbjct: 127 FICLPVAWPISKLLDFLLGH-----------RRAALFRRAELKTLVDFHGNEAGKGGELT 175
Query: 212 SVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI-DIVLKGHFTRYPYCKGSK 270
E II A + S+ K+ MTP D+ +D + ++ +++L+ +R P
Sbjct: 176 HDETTIIAGALELSEKMVKDAMTPISDIFVIDINAKLDRDLMNLILEKGHSRVPVYYEQP 235
Query: 271 DNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVID 330
NIIG+V +++LL+ + ++ N +R++ VPE + IL + +K H A+V+
Sbjct: 236 TNIIGLVLVKNLLTINP-DEEIPVKNVTIRRIPRVPEILPLYDILNEFQKGLSHMAVVVR 294
Query: 331 EYGGTAGLLTMEDIIEEIMGEISDE 355
+ L + ++E ++ E
Sbjct: 295 QCDKIHPLPSKNGSVKEARVDVDSE 319
>gb|AAL36056.1| (AY064150) AT4g33700/T16L1_190 [Arabidopsis thaliana]
gb|AAM26645.1| (AY101524) AT4g33700/T16L1_190 [Arabidopsis thaliana]
Length = 424
Score = 53.9 bits (128), Expect = 4e-06
Identities = 58/257 (22%), Positives = 114/257 (43%), Gaps = 23/257 (8%)
Query: 110 PIFIHSMSVVIAFLSITFLHVVL-GEIVPKSLA----IAKSEKATLFAARPLHVFWVVFY 164
PIF+ + + I+ ++L GEI+P+S+ +A F + + V +
Sbjct: 88 PIFLDGLVTAWGAILISVTLILLFGEIIPQSICSRYGLAIGATVAPFVRVLVFICLPVAW 147
Query: 165 PVVRLFD-VIAHFFLKKMGINPKEHDGTHSEEELKIIV----GESLREGIIDSVEGEIIK 219
P+ +L D ++ H ELK +V E+ + G + E II
Sbjct: 148 PISKLLDFLLGH-----------RRAALFRRAELKTLVDFHGNEAGKGGELTHDETTIIA 196
Query: 220 NAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI-DIVLKGHFTRYPYCKGSKDNIIGMVH 278
A + S+ K+ MTP D+ +D + ++ +++L+ +R P NIIG+V
Sbjct: 197 GALELSEKMVKDAMTPISDIFVIDINAKLDRDLMNLILEKGHSRVPVYYEQPTNIIGLVL 256
Query: 279 IRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGL 338
+++LL+ + ++ N +R++ VPE + IL + +K H A+V+ + L
Sbjct: 257 VKNLLTINP-DEEIPVKNVTIRRIPRVPEILPLYDILNEFQKGLSHMAVVVRQCDKIHPL 315
Query: 339 LTMEDIIEEIMGEISDE 355
+ ++E ++ E
Sbjct: 316 PSKNGSVKEARVDVDSE 332
>ref|NP_291048.1| (NM_033570) ancient conserved domain protein 4 [Mus musculus]
gb|AAF86375.1| (AF216963) ancient conserved domain protein 4; mACDP4 [Mus
musculus]
Length = 644
Score = 53.5 bits (127), Expect = 5e-06
Identities = 57/258 (22%), Positives = 113/258 (43%), Gaps = 26/258 (10%)
Query: 117 SVVIAFLSITFLHVVLGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDV 172
S ++A S T V+ GEI+P++L +A + + + + + +P+ +L D
Sbjct: 137 SGIMAVASSTIGIVIFGEILPQALCSRHGLAVGANTIVLTKVFMLLTFPLSFPISKLLDF 196
Query: 173 IAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEI 232
+ ++ + K + E +V E L +I+ A + + ++I
Sbjct: 197 VLGQEIRTVYNREKLMEMLKVTEPYNDLVKEELN----------MIQGALELRTKTVEDI 246
Query: 233 MTPRKDMVCLDEENSYEEN-IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL--LSRSIFT 289
MT D + + + N + +++ +TR P + + NI+ +++++DL + T
Sbjct: 247 MTQLHDCFMIRSDAILDFNTMSEIMESGYTRIPVFEDEQSNIVDILYVKDLAFVDPDDCT 306
Query: 290 PKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI--------DEYGGTAGLLTM 341
P + V + +L + KK + H A+V D + GL+T+
Sbjct: 307 PLKTITRFYNHPVHFVFHDTKLDAMLEEFKKGKSHLAIVQKVNNEGEGDPFYEVLGLVTL 366
Query: 342 EDIIEEIM-GEISDEYDL 358
ED+IEEI+ EI DE D+
Sbjct: 367 EDVIEEIIKSEILDESDM 384
>ref|NP_179058.1| (NM_127015) hypothetical protein [Arabidopsis thaliana]
gb|AAD15464.1| (AC006067) hypothetical protein [Arabidopsis thaliana]
Length = 408
Score = 53.5 bits (127), Expect = 5e-06
Identities = 61/258 (23%), Positives = 116/258 (44%), Gaps = 35/258 (13%)
Query: 110 PIFIHSMSVVIAFLSITFLHVVL-GEIVPKSLA----IAKSEKATLFAARPLHVFWVVFY 164
PIF+ ++ + I+ ++L GEI+P+S+ +A F + + V +
Sbjct: 95 PIFLDALVTAWGAILISVTLILLFGEIIPQSVCSRHGLAIGATVAPFVRVLVWICLPVAW 154
Query: 165 PVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDF 224
P+ + +V FF G G + +E II G A +
Sbjct: 155 PISKPNNVACQFFQAGKG-------GELTHDETTIIAG------------------ALEL 189
Query: 225 SDTSAKEIMTPRKDMVCLDEENSYEENI-DIVL-KGHFTRYPYCKGSKDNIIGMVHIRDL 282
S+ AK+ MTP D +D + ++ +++L KGH +R P + NIIG+V +++L
Sbjct: 190 SEKMAKDAMTPISDTFVIDINAKLDRDLMNLILDKGH-SRVPVYYEQRTNIIGLVLVKNL 248
Query: 283 LSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTME 342
L+ + ++ N +R++ VPE+ + IL + +K H A+V+ + L +
Sbjct: 249 LTINP-DEEIQVKNVTIRRIPRVPETLPLYDILNEFQKGHSHMAVVVRQCDKIHPLQS-N 306
Query: 343 DIIEEIMGEISDEYDLKQ 360
D E + E+ + D ++
Sbjct: 307 DAANETVNEVRVDVDYER 324
>ref|NP_200091.1| (NM_124657) putative protein [Arabidopsis thaliana]
dbj|BAA98097.1| (AB025606) gene_id:F6N7.28~pir||T04987~similar to unknown protein
[Arabidopsis thaliana]
Length = 519
Score = 52.8 bits (125), Expect = 8e-06
Identities = 63/281 (22%), Positives = 112/281 (39%), Gaps = 50/281 (17%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGN----SNAKLALKMSQRLDTYLSA 73
L+V LV+ L+ + LE ++K G NA+ L + + L
Sbjct: 17 LLVCVALVVFAGLMSGLTLGLMSLSIVELEVMIKAGEPHDRKNAEKILPLVKNQHLLLCT 76
Query: 74 TQLGITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSVV--IAFLSITFLHVV 131
+G L+ AL PIF+ S+ +S+T + +
Sbjct: 77 LLIGNALAMEAL------------------------PIFVDSLLPAWGAILISVTLI-LA 111
Query: 132 LGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKE 187
GEI+P+++ ++ K + + VF+ + YP+ +L D++ K
Sbjct: 112 FGEIIPQAVCSRYGLSIGAKLSFLVRLIIIVFFPLSYPISKLLDLLLG----------KR 161
Query: 188 HDGTHSEEELKIIV----GESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLD 243
H ELK +V E+ + G + E II A D S SAK+ MTP + LD
Sbjct: 162 HSTLLGRAELKSLVYMHGNEAGKGGELTHDETTIISGALDMSQKSAKDAMTPVSQIFSLD 221
Query: 244 EENSYEE-NIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLL 283
+E + ++ +R P + + IIG + +++L+
Sbjct: 222 INFKLDEKTMGLIASAGHSRIPIYSVNPNVIIGFILVKNLI 262
>ref|NP_113573.1| (NM_031396) cyclin M1; ancient conserved domain protein 1 [Mus
musculus]
gb|AAF86371.1|AF202994_1 (AF202994) ancient conserved domain protein 1 [Mus musculus]
Length = 586
Score = 51.6 bits (122), Expect = 2e-05
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 13/165 (7%)
Query: 214 EGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE-ENIDIVLKGHFTRYPYCKGS-KD 271
E II+ A + +E++TP D L + + + +L+ +TR P +G +
Sbjct: 49 ELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRSGYTRIPVYEGDQRH 108
Query: 272 NIIGMVHIRDL--LSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI 329
NI+ ++ ++DL + TP + R + V + +L + KK + H A+V
Sbjct: 109 NIVDILFVKDLAFVDPDDCTPLLTVTRFYNRPLHCVFNDTRLDTVLEEFKKGKSHLAIVQ 168
Query: 330 --------DEYGGTAGLLTMEDIIEEIM-GEISDEYDLKQEGINK 365
D + G++T+EDIIEEI+ EI DE DL + K
Sbjct: 169 RVNNEGEGDPFYEVMGIVTLEDIIEEIIKSEILDETDLYTDNRKK 213
>ref|NP_065081.1| (NM_020348) cyclin M1; ancient conserved domain protein 1 [Homo
sapiens]
gb|AAF86357.1|AF169226_1 (AF169226) ancient conserved domain protein 1 [Homo sapiens]
Length = 586
Score = 51.6 bits (122), Expect = 2e-05
Identities = 45/165 (27%), Positives = 77/165 (46%), Gaps = 13/165 (7%)
Query: 214 EGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYE-ENIDIVLKGHFTRYPYCKGS-KD 271
E II+ A + +E++TP D L + + + +L+ +TR P +G +
Sbjct: 49 ELNIIQGALELRTKVVEEVLTPLGDCFMLRSDAVLDFATVSEILRSGYTRIPVYEGDQRH 108
Query: 272 NIIGMVHIRDL--LSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI 329
NI+ ++ ++DL + TP + R + V + +L + KK + H A+V
Sbjct: 109 NIVDILFVKDLAFVDPDDCTPLLTVTRFYNRPLHCVFNDTRLDTVLEEFKKGKSHLAIVQ 168
Query: 330 --------DEYGGTAGLLTMEDIIEEIM-GEISDEYDLKQEGINK 365
D + G++T+EDIIEEI+ EI DE DL + K
Sbjct: 169 RVNNEGEGDPFYEVMGIVTLEDIIEEIIKSEILDETDLYTDNRKK 213
>emb|CAC35698.1| (AJ301559) hypothetical protein [Rhodococcus fascians]
Length = 126
Score = 50.1 bits (118), Expect = 5e-05
Identities = 34/113 (30%), Positives = 57/113 (50%), Gaps = 14/113 (12%)
Query: 343 DIIEEIMGEISDEYDLKQEGINKLEEGVFELEGMLDLESVEEALHIEFDKECEQVTLGGY 402
D+IEEI+G++ DE+D + + + +G ++ G+L ++ V A E E T+GG
Sbjct: 1 DLIEEIVGDVRDEHDEPELDVARSGDG-WDCAGLLRIDEVASATGYSAP-EGEYETIGGL 58
Query: 403 VFSLLERMPMEGDTIV------------SHGYSFEVLSVDGARIKRLKAVKQD 443
V L R+P EGD ++ G+ V+ +DG RI R+ + D
Sbjct: 59 VLMQLGRIPSEGDAVLLPSPATEDVPDGDGGWMARVIRMDGRRIDRVLILPVD 111
>ref|NP_508521.1| (NM_076120) C33D12.2.p [Caenorhabditis elegans]
pir||T16630 hypothetical protein M02F4.4 - Caenorhabditis elegans
gb|AAK39203.1| (U64600) Hypothetical protein C33D12.2 [Caenorhabditis elegans]
Length = 500
Score = 48.1 bits (113), Expect = 2e-04
Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 45/267 (16%)
Query: 130 VVLGEIVPKSLAIAKSEKATLFAARPLHVFWVVFYPVVRLFDVIAHFFLKKMGINPKEHD 189
VV GEI+P++L + V + YP+ + FLK+ +
Sbjct: 239 VVFGEIIPQALCVKLGLPIGARTIPITQVLLFLMYPLTWPISKVLDIFLKE--------E 290
Query: 190 GTHSEEELKIIVGESLREGII---DSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEEN 246
T S E K++ L E I S E +++ A + D + MT +D+ L
Sbjct: 291 LTRSLERNKLVEMLKLSEKSIIGGQSDEFKMVLGALELYDKTVAHAMTRYEDIFMLPHTL 350
Query: 247 SYEEN-IDIVLKGHFTRYPYCKGS----------KDNIIGMVHIRDLLSRSIFTPKMHD- 294
+ + +L +TR P + + NI+ ++ ++DL ++ P +
Sbjct: 351 TLGAGMVTQILDMGYTRIPIYESKTFGGESLNDDRKNIVALLFVKDL---ALLDPDDNHN 407
Query: 295 -------FNQIVRKMIIVPESASISQILIKMKKEQIHTALVI--------DEYGGTAGLL 339
+N VR++++ + +L + K+ + H ALV D GL+
Sbjct: 408 VMKIASIYNHEVRRVLV---DMPLRNMLEEFKRGEYHMALVERLVEQEDKDPIYELCGLI 464
Query: 340 TMEDIIEEIMG-EISDEYDLKQEGINK 365
T+EDIIEEI+ EI DE D + +++
Sbjct: 465 TLEDIIEEIIQCEIIDETDAVCDNVHR 491
>gb|AAG46066.1|AC079830_6 (AC079830) putative ancient conserved domain protein [Oryza sativa]
Length = 293
Score = 48.1 bits (113), Expect = 2e-04
Identities = 52/196 (26%), Positives = 86/196 (43%), Gaps = 26/196 (13%)
Query: 110 PIFIHSMSVVIAFLSITFLHVVL-GEIVPKSLAIAKSEKATLFAARPLHVF-WVVF---Y 164
PIF+ S+ + I+ ++L GEI+P+S+ A + V WV F Y
Sbjct: 88 PIFLDSLVTAWGAILISVTLILLFGEILPQSICSRYGLAIGASVAPLVRVLVWVCFPVAY 147
Query: 165 PVVRLFDVIAHFFLKKMGINPKEHDGTHSEEELKIIV----GESLREGIIDSVEGEIIKN 220
P+ +L D + K H ELK +V E+ + G + E II
Sbjct: 148 PISKLLDHLLG----------KGHTALFRRAELKTLVTLHGNEAGKGGELTHDETTIIAG 197
Query: 221 AXDFSDTSAKEIMTPRKDMVCLDEENSYEENI--DIVLKGHFTRYPYCKGSKDNIIGMVH 278
A + ++ AK+ MTP +D + ++ ++ KGH +R P K NIIG++
Sbjct: 198 ALELTEKKAKDAMTPLCQTFAIDINAKLDRDLMQKVLDKGH-SRVPVYYEKKTNIIGLI- 255
Query: 279 IRDLLSRSIFTPKMHD 294
L+ S F+ + +D
Sbjct: 256 ---LVMLSSFSKQSYD 268
>pir||T42414 conserved hypothetical protein - fission yeast
(Schizosaccharomyces pombe) (fragment)
dbj|BAA13799.1| (D89137) similar to Saccharomyces cerevisiae ORF YOL060C, EMBL
Accession Number Z74802 [Schizosaccharomyces pombe]
Length = 409
Score = 47.4 bits (111), Expect = 4e-04
Identities = 51/173 (29%), Positives = 89/173 (50%), Gaps = 22/173 (12%)
Query: 201 VGESLREGIIDSVEGE---IIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENI--DIV 255
+G R+ IID + + II D + A+ IMTP +D++ L + +E++ +I+
Sbjct: 27 LGTLHRDLIIDKLNHDDVTIITAVLDLREKHAESIMTPIEDVLTLPMDRILDEDLIGEII 86
Query: 256 LKGHFTRYPYCK-GSKDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMII--VPES---A 309
G ++R P K G + IGM+ + L+ + P D V K + +P++
Sbjct: 87 CAG-YSRIPVHKPGFPHDFIGMLLTKTLIG---YDP---DDKWPVGKFALATLPQTWPNT 139
Query: 310 SISQILIKMKKEQIHTALVIDEYG---GTAGLLTMEDIIEEIMG-EISDEYDL 358
S +L ++ + H L+ + G G G++T+EDIIEE++G EI DE D+
Sbjct: 140 SCLDLLNYCQEGKSHMILISNSPGEPHGAIGVITLEDIIEELIGEEIIDETDV 192
>ref|NP_497773.1| (NM_065372) R13G10.4.p [Caenorhabditis elegans]
pir||T19772 hypothetical protein R13G10.4 - Caenorhabditis elegans
emb|CAA91278.1| (Z66495) contains similarity to Pfam domain: PF00571 (CBS domain),
Score=29.5, E-value=2.6e-05, N=2; PF01595 (Domain of
unknown function), Score=15.4, E-value=1.8e-06, N=1
[Caenorhabditis elegans]
emb|CAA84672.1| (Z35602) contains similarity to Pfam domain: PF00571 (CBS domain),
Score=29.5, E-value=2.6e-05, N=2; PF01595 (Domain of
unknown function), Score=15.4, E-value=1.8e-06, N=1
[Caenorhabditis elegans]
Length = 722
Score = 45.8 bits (107), Expect = 0.001
Identities = 75/369 (20%), Positives = 156/369 (41%), Gaps = 57/369 (15%)
Query: 18 LMVAFLLVLLNAFFVLSEFALVKVRKTRLEELVKIGNSNAKLALKMSQRLDTYLS-ATQL 76
++ F +L++A+ +K L ++KI +A A K +R+ + +TQL
Sbjct: 140 IVFCFFCILMSAYASGMTLGYMKFSMIDLNTMLKIAEGDA--AKKRVRRIMHFRRRSTQL 197
Query: 77 GITLSSLALGWVGEPAIAKLLAALFESMDLRENPIFIHSMSV--VIAFLSITFLHVVLGE 134
+T S L +++F + +H +S V+ + ++ E
Sbjct: 198 VVTFS--------------LFSSVFTVLFTTTCEKMLHGVSNEDVLKMAVPALICLIFAE 243
Query: 135 IVPKSLAIAKSEKATLFAARPLHVFWVVFY---PVVRLFDVIAHFFLKKMGINPKEHDGT 191
++P+ A+ S+ AA V ++F+ P+ ++ FLK+ +
Sbjct: 244 MIPQ--AVCNSKFGFNLAASLWFVTVIIFFVTLPIAYPASLVLGRFLKR------DVREV 295
Query: 192 HSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEEN 251
+ EE + LR + E I++NA F+ ++M P +++ L +
Sbjct: 296 MTPEEKTCL----LRSMAQNEREKTILENATTFTLKKVGQLMVPIEEVFMLSRSQKLNRS 351
Query: 252 --IDIVLKGHFTRYP-YCKGSKDNIIGMVHIRD---------LLSRSIFTPKMHDFNQIV 299
+ +V KG +TR P Y ++ I+GM+++++ L+ +H +
Sbjct: 352 TVLTLVEKG-YTRIPVYDNKNRSVIVGMLNMKNFNLLMVKTNLIDEPTVKEALHALELLK 410
Query: 300 RKMI-----IVPESASISQILIKMKKEQIHTALVIDEYGG----TAGLLTMEDIIEEIMG 350
+ + V + +L +MK H A V+ EY G++T+EDI+E+++G
Sbjct: 411 DRTVKFAVKYVNIEMNAHLLLNRMKTGDFHFACVV-EYSAYDSKVVGIITIEDILEKLIG 469
Query: 351 EISDEYDLK 359
+I + +L+
Sbjct: 470 KIDEINELR 478
>ref|NP_509493.1| (NM_077092) R04E5.2.p [Caenorhabditis elegans]
gb|AAG00012.2| (U41538) Hypothetical protein R04E5.2 [Caenorhabditis elegans]
Length = 762
Score = 45.4 bits (106), Expect = 0.001
Identities = 63/293 (21%), Positives = 119/293 (40%), Gaps = 65/293 (22%)
Query: 119 VIAFLSITFLHVVLGEIVPKSLAI----AKSEKATLFAARPLHVFWVVFYPVVRLFDVIA 174
+IAF++ T VV GEI+P+S+ + A + + + + +P+ ++ D
Sbjct: 235 LIAFVASTVGIVVFGEILPQSICVKYGLAVGANTIFITKFFMFLLFPITWPLGKILD--- 291
Query: 175 HFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMT 234
K G++ + + E LK+ + + ID +I A + + S +++MT
Sbjct: 292 ----KYAGVDIDVVNRSRMVEMLKMNMENDACD--IDLSTLKIAIGAMELTKKSVRDVMT 345
Query: 235 PRKDMVCLDEENSYE-ENIDIVLKGHFTRYPYCKGSKDN---IIGMVHIRDLL----SRS 286
D+ L E+ E + + +TR P +G+ N + ++++ DL +
Sbjct: 346 DIDDVFMLSEDQVLNAETMTKISDSGYTRIPVFEGNNRNKVAVKNLLYVSDLALIGKDNN 405
Query: 287 IFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI----------------- 329
I + FN+ R++ IV ES ++ ++ + K H A+V
Sbjct: 406 ITVKAVARFNK--RRLRIVDESMPLTALMDEFKLGDYHLAMVAKATEVKKHHHGKFADGT 463
Query: 330 ------------------------DEYGGTAGLLTMEDIIEEIM-GEISDEYD 357
D GL+T+EDI EE++ EI+DE D
Sbjct: 464 VDSFILKSMKLVEATMMPQVENPEDHPVTLVGLITLEDITEELLQAEITDETD 516
>pir||T28874 hypothetical protein R04E5.2 - Caenorhabditis elegans
Length = 538
Score = 45.4 bits (106), Expect = 0.001
Identities = 63/293 (21%), Positives = 119/293 (40%), Gaps = 65/293 (22%)
Query: 119 VIAFLSITFLHVVLGEIVPKSLAI----AKSEKATLFAARPLHVFWVVFYPVVRLFDVIA 174
+IAF++ T VV GEI+P+S+ + A + + + + +P+ ++ D
Sbjct: 216 LIAFVASTVGIVVFGEILPQSICVKYGLAVGANTIFITKFFMFLLFPITWPLGKILD--- 272
Query: 175 HFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEIMT 234
K G++ + + E LK+ + + ID +I A + + S +++MT
Sbjct: 273 ----KYAGVDIDVVNRSRMVEMLKMNMENDACD--IDLSTLKIAIGAMELTKKSVRDVMT 326
Query: 235 PRKDMVCLDEENSYE-ENIDIVLKGHFTRYPYCKGSKDN---IIGMVHIRDLL----SRS 286
D+ L E+ E + + +TR P +G+ N + ++++ DL +
Sbjct: 327 DIDDVFMLSEDQVLNAETMTKISDSGYTRIPVFEGNNRNKVAVKNLLYVSDLALIGKDNN 386
Query: 287 IFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI----------------- 329
I + FN+ R++ IV ES ++ ++ + K H A+V
Sbjct: 387 ITVKAVARFNK--RRLRIVDESMPLTALMDEFKLGDYHLAMVAKATEVKKHHHGKFADGT 444
Query: 330 ------------------------DEYGGTAGLLTMEDIIEEIM-GEISDEYD 357
D GL+T+EDI EE++ EI+DE D
Sbjct: 445 VDSFILKSMKLVEATMMPQVENPEDHPVTLVGLITLEDITEELLQAEITDETD 497
>dbj|BAA90926.1| (AK000071) unnamed protein product [Homo sapiens]
Length = 396
Score = 45.1 bits (105), Expect = 0.002
Identities = 36/141 (25%), Positives = 67/141 (46%), Gaps = 13/141 (9%)
Query: 255 VLKGHFTRYPYCKGSKDNIIGMVHIRDL--LSRSIFTPKMHDFNQIVRKMIIVPESASIS 312
+++ +TR P +G + NI+ ++ ++DL + TP + V +
Sbjct: 16 IMESGYTRIPVFEGERSNIVDLLFVKDLAFVDPDDCTPLKTITKFYNHPLHFVFNDTKLD 75
Query: 313 QILIKMKKEQIHTALVI--------DEYGGTAGLLTMEDIIEEIM-GEISDEYDLKQEGI 363
+L + KK + H A+V D + G++T+ED+IEEI+ EI DE DL +
Sbjct: 76 AMLEEFKKGKSHLAIVQRVNNEGEGDPFYEVLGIVTLEDVIEEIIKSEILDETDLYTD-- 133
Query: 364 NKLEEGVFELEGMLDLESVEE 384
N+ ++ V E D + ++
Sbjct: 134 NRTKKKVAHRERKQDFSAFKQ 154
>ref|NP_613810.1| (NC_003551) CBS-domain-containing protein [Methanopyrus kandleri
AV19]
sp|P50100|Y525_METKA Hypothetical protein MK0525 (OrfX)
gb|AAM01740.1| (AE010347) CBS-domain-containing protein [Methanopyrus kandleri
AV19]
Length = 196
Score = 44.7 bits (104), Expect = 0.002
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 270 KDNIIGMVHIRDLLSRSIFTPKMHDF----NQIVRKMIIVPESASISQILIKMKKEQIHT 325
KD IG++ RDL+ + + K D + + + +I V E +++ + M + I
Sbjct: 44 KDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQPVITVEEDMEVNEAVKLMVDKGIRR 103
Query: 326 ALVIDEYGGTAGLLTMEDIIE---EIMGEISDEYDLKQEGINKLEEGVFELEGMLDL-ES 381
++D+ G G++TM+DI++ ++ I +E QE + +LEE +EG+ DL E+
Sbjct: 104 LPIVDDNGKLIGIVTMQDILQVEPYLVATIEEEMKKFQEELEELEEVSEIIEGVCDLCET 163
Query: 382 VEEAL 386
E L
Sbjct: 164 YSEEL 168
>ref|NP_280824.1| (NC_002607) Vng2168c [Halobacterium sp. NRC-1]
gb|AAG20304.1| (AE005104) Vng2168c [Halobacterium sp. NRC-1]
Length = 390
Score = 44.7 bits (104), Expect = 0.002
Identities = 30/124 (24%), Positives = 59/124 (47%), Gaps = 3/124 (2%)
Query: 224 FSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLL 283
F + ++MTP D+ + S + +D +L+ T YP + + +GMV + D
Sbjct: 246 FEGVTVADVMTPASDVHTVAATASVADLMDSMLEHRHTGYPVFRDA--TAVGMVTLDDAR 303
Query: 284 S-RSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTME 342
S R++ M + + + +P SA + L +++ + LV+D G GL+T
Sbjct: 304 SVRAVERDAMRVADVMSDDVYTIPGSADATDALDALQEHSVGRLLVVDADGEMVGLITRS 363
Query: 343 DIIE 346
D+++
Sbjct: 364 DLMD 367
>gb|AAA92086.1| (U31567) similar to the inosine monophosphate dehydrogenase from
Pyrococcus furiosus (SwissProt Accession Number P42851);
orfX protein; Method: conceptual translation supplied by
author [Methanopyrus kandleri]
Length = 172
Score = 44.7 bits (104), Expect = 0.002
Identities = 35/125 (28%), Positives = 65/125 (52%), Gaps = 8/125 (6%)
Query: 270 KDNIIGMVHIRDLLSRSIFTPKMHDF----NQIVRKMIIVPESASISQILIKMKKEQIHT 325
KD IG++ RDL+ + + K D + + + +I V E +++ + M + I
Sbjct: 44 KDEPIGIITERDLVIKVVSQGKNPDEVIARDIMSQPVITVEEDMEVNEAVKLMVDKGIRR 103
Query: 326 ALVIDEYGGTAGLLTMEDIIE---EIMGEISDEYDLKQEGINKLEEGVFELEGMLDL-ES 381
++D+ G G++TM+DI++ ++ I +E QE + +LEE +EG+ DL E+
Sbjct: 104 LPIVDDNGKLIGIVTMQDILQVEPYLVATIEEEMKKFQEELEELEEVSEIIEGVCDLCET 163
Query: 382 VEEAL 386
E L
Sbjct: 164 YSEEL 168
>ref|NP_269462.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
gb|AAK34183.1| (AE006573) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
Length = 427
Score = 43.5 bits (101), Expect = 0.005
Identities = 36/159 (22%), Positives = 75/159 (46%), Gaps = 5/159 (3%)
Query: 228 SAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSI 287
+ +++M P D L E++S EE ++ K R+P K +IG+V +RD++ +
Sbjct: 189 TVEQVMIPITDYGYLCEDSSVEEFNTLIKKTRQVRFPVL-DYKRKVIGVVSMRDVVDQ-- 245
Query: 288 FTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEE 347
P + + I + S++ I KM E ++ V DE G++T +E
Sbjct: 246 -LPTTKLTKVMSKNPITARPNTSLANISQKMIFEDLNMLPVTDEENNLLGMITRRQAMEN 304
Query: 348 IMG-EISDEYDLKQEGINKLEEGVFELEGMLDLESVEEA 385
+ + ++ Y ++ ++ LEE V + +++ ++ A
Sbjct: 305 LPNHQPNNPYTYSEQILSNLEETVDYYQVVVEPTMIDSA 343
>gb|AAH21222.1|AAH21222 (BC021222) Similar to cyclin M2 [Homo sapiens]
Length = 552
Score = 43.5 bits (101), Expect = 0.005
Identities = 36/171 (21%), Positives = 78/171 (45%), Gaps = 15/171 (8%)
Query: 117 SVVIAFLSITFLHVVLGEIVPKSLA----IAKSEKATLFAARPLHVFWVVFYPVVRLFDV 172
S ++A + T V+ GEIVP+++ +A + + + YPV +L D
Sbjct: 340 SGLVAVVVSTIGIVIFGEIVPQAICSRHGLAVGANTIFLTKFFMMMTFPASYPVSKLLDC 399
Query: 173 IAHFFLKKMGINPKEHDGTHSEEELKIIVGESLREGIIDSVEGEIIKNAXDFSDTSAKEI 232
+ +E ++ E+L ++ + + E II+ A + + +++
Sbjct: 400 VLG----------QEIGTVYNREKLLEMLRVTDPYNDLVKEELNIIQGALELRTKTVEDV 449
Query: 233 MTPRKDMVCLDEENSYEEN-IDIVLKGHFTRYPYCKGSKDNIIGMVHIRDL 282
MTP +D + E + N + +++ +TR P +G + NI+ ++ ++DL
Sbjct: 450 MTPLRDCFMITGEAILDFNTMSEIMESGYTRIPVFEGERSNIVDLLFVKDL 500
>ref|NP_247366.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q57837|Y392_METJA Hypothetical protein MJ0392
pir||H64348 hypothetical protein homolog MJ0392 - Methanococcus jannaschii
gb|AAB98382.1| (U67492) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 339
Score = 43.5 bits (101), Expect = 0.005
Identities = 37/146 (25%), Positives = 66/146 (44%), Gaps = 18/146 (12%)
Query: 214 EGEIIKNAXDFSDTSAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNI 273
E +++ F + AK+IMTP + V + + S EE +D +LK + YP + K +
Sbjct: 207 ESRVVEVETIFKNIKAKDIMTP--NPVYVTPDMSIEEFLDFMLKHKYFGYPVVENGK--L 262
Query: 274 IGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYG 333
+G + I ++ K + K ++V E I +IL KM + + E G
Sbjct: 263 VGCIGIGNI------HKKEGTVRDYMEKPVVVSEDTDIKEILRKMANTD---RVFVVEGG 313
Query: 334 GTAGLLTMEDIIE-----EIMGEISD 354
G+++ DI+ E+ E+ D
Sbjct: 314 KLKGIISKTDILRAMSILELKEELKD 339
>ref|NP_578014.1| (NC_003413) inosine-5'-monophosphate dehydrogenase (imp
dehydrogenase); (IMPDH) [Pyrococcus furiosus DSM 3638]
sp|P42851|IMDH_PYRFU Inosine-5'-monophosphate dehydrogenase (IMP dehydrogenase) (IMPDH)
(IMPD)
pir||JC4998 IMP dehydrogenase (EC 1.1.1.205) - Pyrococcus furiosus
gb|AAC44532.1| (U08814) IMP dehydrogenase [Pyrococcus furiosus]
gb|AAL80409.1| (AE010152) inosine-5'-monophosphate dehydrogenase (imp
dehydrogenase); (IMPDH) [Pyrococcus furiosus DSM 3638]
Length = 485
Score = 43.1 bits (100), Expect = 0.007
Identities = 23/76 (30%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 270 KDNIIGMVHIRDLLSRSIFTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVI 329
+D ++G++ +D+ +R T K + R++I VPES + + L M + +I V+
Sbjct: 132 EDRVVGIITKKDIAAREGRTVK----ELMTREVITVPESVDVEEALKIMMENRIDRLPVV 187
Query: 330 DEYGGTAGLLTMEDII 345
+E G GL+TM D++
Sbjct: 188 NEDGKLVGLITMSDLV 203
>ref|NP_607464.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
gb|AAL97963.1| (AE010057) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 427
Score = 42.7 bits (99), Expect = 0.009
Identities = 36/159 (22%), Positives = 74/159 (45%), Gaps = 5/159 (3%)
Query: 228 SAKEIMTPRKDMVCLDEENSYEENIDIVLKGHFTRYPYCKGSKDNIIGMVHIRDLLSRSI 287
+ +++M P D L E +S EE ++ K R+P K +IG+V +RD++ +
Sbjct: 189 TVEQVMIPITDYGYLCENSSVEEFNTLIKKTRQVRFPVL-DYKRKVIGVVSMRDVVDQ-- 245
Query: 288 FTPKMHDFNQIVRKMIIVPESASISQILIKMKKEQIHTALVIDEYGGTAGLLTMEDIIEE 347
P + + I + S++ I KM E ++ V DE G++T +E
Sbjct: 246 -LPTTKLTKVMSKNPITARPNTSLANISQKMIFEDLNMLPVTDEENNLLGMITRRQAMEN 304
Query: 348 IMG-EISDEYDLKQEGINKLEEGVFELEGMLDLESVEEA 385
+ + ++ Y ++ ++ LEE V + +++ ++ A
Sbjct: 305 LPNHQPNNPYTYSEQILSNLEETVDYYQVVVEPTMIDSA 343
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.320 0.138 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 259,806,887
Number of Sequences: 1026957
Number of extensions: 10433068
Number of successful extensions: 30532
Number of sequences better than 1.0e-02: 231
Number of HSP's better than 0.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 29795
Number of HSP's gapped (non-prelim): 253
length of query: 449
length of database: 324,149,939
effective HSP length: 124
effective length of query: 325
effective length of database: 196,807,271
effective search space: 63962363075
effective search space used: 63962363075
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 99 (42.7 bits)