BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646132|ref|NP_208314.1| hypothetical protein
[Helicobacter pylori 26695]
(115 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_208314.1| (NC_000915) hypothetical protein [Helicoba... 234 1e-61
ref|NP_224131.1| (NC_000921) putative [Helicobacter pylori ... 214 2e-55
ref|NP_326296.1| (NC_002771) LIPOPROTEIN [Mycoplasma pulmon... 46 7e-05
gb|AAM45347.1| (AC117080) hypothetical protein [Dictyosteli... 45 1e-04
ref|NP_473295.1| (NC_000521) hypothetical protein, PFC0810c... 45 1e-04
gb|AAD28550.1|AF111943_1 (AF111943) development protein DG1... 45 2e-04
gb|AAK50004.1|AF361474_1 (AF361474) receptor histidine kina... 45 2e-04
pir||T09057 probable protein-histidine kinase (EC 2.7.3.-) ... 45 2e-04
gb|AAL96749.1|AC115684_8 (AC115684) DEVELOPMENT PROTEIN DG1... 45 2e-04
gb|AAM43634.1| (AC117073) uracil-DNA glycosylase [Dictyoste... 45 2e-04
ref|NP_473201.1| (NC_000521) predicted using hexExon; MAL3P... 44 4e-04
gb|AAL06398.1|AF356777_1 (AF356777) unknown [Francisella tu... 43 6e-04
pir||T08605 hypothetical protein HelE - slime mold (Dictyos... 43 8e-04
dbj|BAB91768.1| (AP003287) hypothetical protein~similar to ... 42 0.001
gb|AAM33695.1| (AC117076) hypothetical protein [Dictyosteli... 42 0.001
gb|AAM43755.1| (AC116989) CDNA FLJ12480 FIS, CLONE NT2RM100... 42 0.001
gb|AAM09353.1| (AC117075) hypothetical protein [Dictyosteli... 42 0.001
pir||T17414 TipC protein - slime mold (Dictyostelium discoi... 42 0.001
ref|NP_473285.1| (NC_000521) hypothetical protein, PFC0760c... 42 0.001
gb|AAG21921.1|AF179276_2 (AF179276) pawn B-II [Paramecium t... 42 0.001
gb|AAM34377.1| (AC117082) C31E10.8 PROTEIN. [Dictyostelium ... 42 0.001
gb|AAK54088.2|AF362369_1 (AF362369) histidine kinase DhkG [... 42 0.001
gb|AAM33693.1| (AC117076) putative protein [Dictyostelium d... 42 0.002
ref|NP_563078.1| (NC_003366) 2`,3`-cyclic-nucleotide 2`-pho... 42 0.002
gb|AAL92340.1| (AC115600) hypothetical protein [Dictyosteli... 42 0.002
gb|AAL92993.1| (AC116030) hypothetical protein [Dictyosteli... 41 0.002
gb|AAM34352.1| (AC117082) hypothetical protein [Dictyosteli... 41 0.002
gb|AAD17489.2| (AF052006) C-module-binding factor; CMBF [Di... 41 0.002
ref|NP_473051.1| (NC_000910) predicted membrane associated ... 41 0.002
ref|NP_326524.1| (NC_002771) MEMBRANE NUCLEASE, LIPOPROTEIN... 41 0.002
gb|AAM33690.1| (AC117076) TRANSCRIPTION FACTOR DP1. 6/101 [... 41 0.002
gb|AAL92689.1|AC115682_16 (AC115682) hypothetical protein [... 41 0.002
sp|P18160|KYK1_DICDI Non-receptor tyrosine kinase spore lys... 41 0.003
gb|AAK17065.1| (AF244123) fibronectin binding autolysin [St... 41 0.003
gb|AAM33753.1| (AC116961) hypothetical protein [Dictyosteli... 41 0.003
gb|AAL92295.1| (AC115593) hypothetical protein [Dictyosteli... 40 0.004
emb|CAB62846.2| (AL035475) hypothetical protein [Plasmodium... 40 0.004
gb|AAM33216.1| (AC116965) CG5792 PROTEIN. 6/101 [Dictyostel... 40 0.004
gb|AAM44369.1| (AC123513) putative protein contains similar... 40 0.004
gb|AAL93044.1|AC116032_33 (AC116032) hypothetical protein [... 40 0.004
gb|AAM33177.1| (AC117072) POLYCOMBLIKE 2. 9/101 [Dictyostel... 40 0.004
emb|CAB62853.1| (AL035475) hypothetical protein MAL4P2.12 [... 40 0.004
emb|CAB62859.1| (AL035475) hypothetical protein MAL4P2.18 [... 40 0.004
gb|AAL92971.1| (AC116028) hypothetical protein [Dictyosteli... 40 0.004
gb|AAL88717.1|AC114257_2 (AC114257) hypothetical protein [D... 40 0.004
gb|AAK63225.1|AF325156_1 (AF325156) merozoite surface prote... 40 0.005
gb|AAM45260.1| (AC116978) Hypothetical 178.4 kDa protein [D... 40 0.005
gb|AAL92600.1|AC115678_1 (AC115678) NEUROFIBROMATOSIS PROTE... 40 0.006
gb|AAL93601.1| (AC116101) hypothetical protein [Dictyosteli... 40 0.006
gb|AAM09367.1| (AC117077) hypothetical protein [Dictyosteli... 40 0.006
ref|NP_473100.1| (NC_000910) RNA helicase [Plasmodium falci... 40 0.006
ref|NP_282836.1| (NC_002163) hypothetical protein Cj1710c [... 40 0.006
gb|AAD38875.1|AF110007_2 (AF110007) transcription factor [M... 39 0.008
emb|CAC03100.1| (X53023) erythrocyte membrane-associated an... 39 0.008
emb|CAA73586.1| (Y13119) pleiotropic effects on cellular di... 39 0.008
sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kin... 39 0.008
emb|CAB39037.2| (AL034559) hypothetical protein, PFC0960c [... 39 0.008
pir||T18277 kinesin heavy chain - slime mold (Dictyostelium... 39 0.008
gb|AAK54092.2|AF362373_1 (AF362373) histidine kinase DhkL [... 39 0.008
ref|NP_472959.1| (NC_000910) Ser/Thr protein kinase [Plasmo... 39 0.008
ref|NP_473200.1| (NC_000521) predicted using hexExon; MAL3P... 39 0.008
ref|NP_010279.1| (NC_001136) RNA Polymerase II transcriptio... 39 0.008
ref|NP_472985.1| (NC_000910) hypothetical protein [Plasmodi... 39 0.008
ref|NP_473326.1| (NC_000521) predicted using hexExon; MAL3P... 39 0.008
gb|AAC05577.1| (AF051898) coronin binding protein [Dictyost... 39 0.008
ref|NP_473257.1| (NC_000521) predicted using hexExon; MAL3P... 39 0.008
ref|NP_472952.1| (NC_000910) predicted secreted protein [Pl... 39 0.008
pir||S23692 erythrocyte membrane-associated antigen (clone ... 39 0.008
>ref|NP_208314.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||D64710 hypothetical protein HP1524 - Helicobacter pylori (strain 26695)
gb|AAD08566.1| (AE000650) H. pylori predicted coding region HP1524 [Helicobacter
pylori 26695]
Length = 115
Score = 234 bits (597), Expect = 1e-61
Identities = 115/115 (100%), Positives = 115/115 (100%)
Query: 1 MKSKITHFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEED 60
MKSKITHFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEED
Sbjct: 1 MKSKITHFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEED 60
Query: 61 EKATKEVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRKY 115
EKATKEVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRKY
Sbjct: 61 EKATKEVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRKY 115
>ref|NP_224131.1| (NC_000921) putative [Helicobacter pylori J99]
pir||A71809 hypothetical protein jhp1413 - Helicobacter pylori (strain J99)
gb|AAD06992.1| (AE001564) putative [Helicobacter pylori J99]
Length = 115
Score = 214 bits (544), Expect = 2e-55
Identities = 104/115 (90%), Positives = 108/115 (93%)
Query: 1 MKSKITHFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEED 60
MKSKITHFI ISFVLS+ SACKDEPKKSSQSHQNNTK T+NN INQ N DI+KIEHEEED
Sbjct: 1 MKSKITHFIVISFVLSVLSACKDEPKKSSQSHQNNTKTTQNNQINQPNKDIKKIEHEEED 60
Query: 61 EKATKEVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRKY 115
EK TKEVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNL+SPLNRKY
Sbjct: 61 EKVTKEVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLSSPLNRKY 115
>ref|NP_326296.1| (NC_002771) LIPOPROTEIN [Mycoplasma pulmonis]
emb|CAC13638.1| (AL445564) LIPOPROTEIN [Mycoplasma pulmonis]
Length = 622
Score = 46.2 bits (108), Expect = 7e-05
Identities = 29/92 (31%), Positives = 50/92 (53%), Gaps = 3/92 (3%)
Query: 22 KDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEIN 81
K++ K +++ NN+ KN+ + + N+D K+ +DEKA KE ++ +++ K DE
Sbjct: 142 KNKNPKDNENSNNNSSDQKNDELQKNNSD--KLNDNVQDEKANKENSNSNDSKEKNDENT 199
Query: 82 NEENADPSQ-KRTNNVLQRATNHQDNLNSPLN 112
N+ D +Q K + Q Q+NLNS N
Sbjct: 200 NKIQQDQNQQKEDQDTKQIEQEKQNNLNSNKN 231
>gb|AAM45347.1| (AC117080) hypothetical protein [Dictyostelium discoideum]
Length = 726
Score = 45.4 bits (106), Expect = 1e-04
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 29 SQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENADP 88
+ + NN I NN IN NN+I + + N INN N + NN N +
Sbjct: 183 NNNSNNNININNNNNINNNNNNISDSNNSHNNYNKNNNNNTYINNNNNNNNNNNNNNNNN 242
Query: 89 SQKRTNNVLQRATNHQDNLNSPLNRK 114
+ NN N+ D N+P N K
Sbjct: 243 NNNNNNN-----NNNNDKNNTPGNSK 263
>ref|NP_473295.1| (NC_000521) hypothetical protein, PFC0810c [Plasmodium falciparum]
pir||T18491 hypothetical protein C0810c - malaria parasite (Plasmodium
falciparum)
emb|CAB11130.1| (Z98551) hypothetical protein, PFC0810c [Plasmodium falciparum 3D7]
Length = 1119
Score = 45.4 bits (106), Expect = 1e-04
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 14/110 (12%)
Query: 12 SFVLSLFSACKDEPKKSSQSHQNNTKITKNNP----INQANNDIRKIEHEEEDEKATKEV 67
+F+L A K+E KK Q +QN K+ KN IN +DI +I + +
Sbjct: 495 TFILKSHLALKNELKKFFQINQN--KLLKNKTGVGLINSTKDDINRITNMNLATNTNNAM 552
Query: 68 NDLIN--------NENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNS 109
++ N N N +INN +D + TNN+ TN+ +N N+
Sbjct: 553 GNITNDSNIINTNNNNNTSDINNNNTSDINNNNTNNINNNNTNNINNNNT 602
>gb|AAD28550.1|AF111943_1 (AF111943) development protein DG1124 [Dictyostelium discoideum]
Length = 757
Score = 45.1 bits (105), Expect = 2e-04
Identities = 27/83 (32%), Positives = 44/83 (52%), Gaps = 3/83 (3%)
Query: 27 KSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENA 86
+SS + N +I +N + NN+ +IE E +E N++ NN N +EINN +N
Sbjct: 431 ESSTDNTENGEIIGDNTLTNTNNEPVQIEGEL-NEGLNNNTNNINNNNNNNNEINNNDNN 489
Query: 87 DPSQKRTNNVLQRATNHQDNLNS 109
+ +Q NN Q N++ N+ S
Sbjct: 490 NNNQNENNN--QNDNNNEYNIES 510
>gb|AAK50004.1|AF361474_1 (AF361474) receptor histidine kinase DhkC [Dictyostelium
discoideum]
Length = 1225
Score = 45.1 bits (105), Expect = 2e-04
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 8 FIAISFVLSLF-----SACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEK 62
F IS +L F + D+ ++ ++ + + KI NN N NN+ KIE +D+
Sbjct: 16 FTIISIILFYFFINNKNNLIDQCQEVTKLNNKDNKIVNNNNNNYNNNNFNKIEEINDDK- 74
Query: 63 ATKEVNDLINNEN---------KIDEINNEENADPSQKRTNNVLQRATN 102
KE+ LINN N +ID NN N + + NN L + +N
Sbjct: 75 -NKEIIKLINNSNNKNLKIKIQEIDSGNNNNNNNNNNNNNNNNLNKNSN 122
>pir||T09057 probable protein-histidine kinase (EC 2.7.3.-) DhkC - slime mold
(Dictyostelium discoideum)
gb|AAB84206.1| (AF029726) histidine kinase C [Dictyostelium discoideum]
Length = 1225
Score = 45.1 bits (105), Expect = 2e-04
Identities = 33/109 (30%), Positives = 51/109 (46%), Gaps = 16/109 (14%)
Query: 8 FIAISFVLSLF-----SACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEK 62
F IS +L F + D+ ++ ++ + + KI NN N NN+ KIE +D+
Sbjct: 16 FTIISIILFYFFINNKNNLIDQCQEVTKLNNKDNKIVNNNNNNYNNNNFNKIEEINDDK- 74
Query: 63 ATKEVNDLINNEN---------KIDEINNEENADPSQKRTNNVLQRATN 102
KE+ LINN N +ID NN N + + NN L + +N
Sbjct: 75 -NKEIIKLINNSNNKNLKIKIQEIDSGNNNNNNNNNNNNNNNNLNKNSN 122
>gb|AAL96749.1|AC115684_8 (AC115684) DEVELOPMENT PROTEIN DG1124 [Dictyostelium discoideum]
Length = 1282
Score = 45.1 bits (105), Expect = 2e-04
Identities = 27/83 (32%), Positives = 44/83 (52%), Gaps = 3/83 (3%)
Query: 27 KSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENA 86
+SS + N +I +N + NN+ +IE E +E N++ NN N +EINN +N
Sbjct: 956 ESSTDNTENGEIIGDNTLTNTNNEPVQIEGEL-NEGLNNNTNNINNNNNNNNEINNNDNN 1014
Query: 87 DPSQKRTNNVLQRATNHQDNLNS 109
+ +Q NN Q N++ N+ S
Sbjct: 1015 NNNQNENNN--QNDNNNEYNIES 1035
>gb|AAM43634.1| (AC117073) uracil-DNA glycosylase [Dictyostelium discoideum]
Length = 597
Score = 44.7 bits (104), Expect = 2e-04
Identities = 27/89 (30%), Positives = 40/89 (44%), Gaps = 4/89 (4%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKID--EINNE-- 83
++ +H NN NN N NN+ + + + N+ NN N ID E NNE
Sbjct: 492 NNNNHNNNNNNNNNNTNNNINNNTNNNKSNDNNNHNNTNNNNTNNNSNNIDNKENNNEEN 551
Query: 84 ENADPSQKRTNNVLQRATNHQDNLNSPLN 112
EN D + NN N+ +N+N+ N
Sbjct: 552 ENVDFNNNNNNNNDNNNNNNNNNINNSNN 580
Score = 43.5 bits (101), Expect = 4e-04
Identities = 24/90 (26%), Positives = 41/90 (44%), Gaps = 5/90 (5%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLIN---NENKIDEINNEE 84
++ ++ NN NN N NN+I H + N+ IN N NK ++ NN
Sbjct: 468 NNNNNNNNNNNNNNNNNNNNNNNINNNNHNNNNNNNNNNTNNNINNNTNNNKSNDNNNHN 527
Query: 85 NA--DPSQKRTNNVLQRATNHQDNLNSPLN 112
N + + +NN+ + N+++N N N
Sbjct: 528 NTNNNNTNNNSNNIDNKENNNEENENVDFN 557
Score = 39.3 bits (90), Expect = 0.008
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 4/70 (5%)
Query: 26 KKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEEN 85
K + ++ NNT NN N +NN K + EE+E + N+ NN N + NN N
Sbjct: 519 KSNDNNNHNNTN--NNNTNNNSNNIDNKENNNEENENV--DFNNNNNNNNDNNNNNNNNN 574
Query: 86 ADPSQKRTNN 95
+ S TNN
Sbjct: 575 INNSNNNTNN 584
>ref|NP_473201.1| (NC_000521) predicted using hexExon; MAL3P3.5 (PFC0345w),
Hypothetical protein, len: 1712 aa [Plasmodium
falciparum]
pir||T18429 hypothetical protein C0345w - malaria parasite (Plasmodium
falciparum)
emb|CAB11106.1| (Z98547) hypothetical protein, PFC0345w [Plasmodium falciparum 3D7]
Length = 1711
Score = 43.5 bits (101), Expect = 4e-04
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 26 KKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEEN 85
K SS N KNN NN+ ++ + + + N+LINN+N NN N
Sbjct: 1502 KDSSSVDNNKNNNNKNNNNKNNNNENNNKNNKNNNNDSFSKDNNLINNDN-----NNNNN 1556
Query: 86 ADPSQKRTNNVLQRATNHQDNLNSPLNRK 114
+ S + NN++ N+ +N N+ + +K
Sbjct: 1557 NNDSFSKDNNLINNDNNNNNNNNNKVIKK 1585
>gb|AAL06398.1|AF356777_1 (AF356777) unknown [Francisella tularensis subsp. tularensis]
Length = 231
Score = 43.1 bits (100), Expect = 6e-04
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 4/91 (4%)
Query: 23 DEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINN 82
++ +K Q+ QNN K K+N N+ N D + + +D K K+ D +N++ D +N
Sbjct: 85 EKQQKQQQNSQNNNKDNKDNKDNKDNKDNK----DNKDNKDNKDNKDNKDNKDNKDNKDN 140
Query: 83 EENADPSQKRTNNVLQRATNHQDNLNSPLNR 113
++N D + N + +++DN ++ N+
Sbjct: 141 KDNKDNKDNKDNKDNKDNKDNKDNKDNKDNK 171
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 1/93 (1%)
Query: 22 KDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEIN 81
KD + K K+N N+ N D K + +D K K+ D +N++ D +
Sbjct: 105 KDNKDNKDNKDNKDNKDNKDNKDNKDNKD-NKDNKDNKDNKDNKDNKDNKDNKDNKDNKD 163
Query: 82 NEENADPSQKRTNNVLQRATNHQDNLNSPLNRK 114
N++N D ++ N N D LN K
Sbjct: 164 NKDNKDNKDQQEQNEQNEQANKVDQRQKELNNK 196
>pir||T08605 hypothetical protein HelE - slime mold (Dictyostelium discoideum)
(fragment)
gb|AAB70840.1| (AF019981) HelE [Dictyostelium discoideum]
Length = 947
Score = 42.7 bits (99), Expect = 8e-04
Identities = 22/93 (23%), Positives = 42/93 (44%), Gaps = 5/93 (5%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
++ ++ NN NN N NN+ + + + N+ N N ID+++ + N D
Sbjct: 245 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNNNDNNYNKNNNNIDDLSEDPNTD 304
Query: 88 PSQKRTNNVLQRATNHQ-----DNLNSPLNRKY 115
++ NN+ R N+Q +N N+ N +
Sbjct: 305 NDKEWYNNINDRIVNYQHFDVHNNNNNKRNNNF 337
>dbj|BAB91768.1| (AP003287) hypothetical protein~similar to Oryza sativa
chromosome 1, P0424A08.05 [Oryza sativa (japonica
cultivar-group)]
Length = 156
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/43 (41%), Positives = 33/43 (75%), Gaps = 2/43 (4%)
Query: 58 EEDEKATKEVNDLINNENKI--DEINNEENADPSQKRTNNVLQ 98
EE +K +++NDLI+N+N++ DE+NN+++A+ + NNV+Q
Sbjct: 43 EEADKINEKLNDLIDNDNEVGVDEVNNDQDANMNDNSENNVVQ 85
>gb|AAM33695.1| (AC117076) hypothetical protein [Dictyostelium discoideum]
Length = 619
Score = 42.4 bits (98), Expect = 0.001
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 22 KDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKE---VNDLINNENKID 78
KDE ++ Q Q + + Q ++I+++E+DEK KE + + NN N +
Sbjct: 72 KDEKQQQQQQQQQQQQQQQQQQQQQQQQQEKQIKNKEKDEKDEKEEIKIEIIDNNSNNNN 131
Query: 79 EINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRK 114
NN N + + NN N+ +N N+ N +
Sbjct: 132 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNE 167
>gb|AAM43755.1| (AC116989) CDNA FLJ12480 FIS, CLONE NT2RM1001066. 3/101
[Dictyostelium discoideum]
Length = 1604
Score = 42.4 bits (98), Expect = 0.001
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
++ ++ NN I NN N NN+ I + + N+ NN N + NN N +
Sbjct: 6 NNNNNNNNNNINNNNNNNINNNNNNNINNNNNNNNINNNNNNNNNNNNNNNNNNNNNNNN 65
Query: 88 PSQKRTNNVLQRATNHQDNLNSPLN 112
+ NN + N N+NS N
Sbjct: 66 NNNNNNNNNNNKNINKLKNINSEKN 90
>gb|AAM09353.1| (AC117075) hypothetical protein [Dictyostelium discoideum]
Length = 740
Score = 42.4 bits (98), Expect = 0.001
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 11/99 (11%)
Query: 25 PKKSSQSHQNNTKITKNNPI-----------NQANNDIRKIEHEEEDEKATKEVNDLINN 73
P + SQS QNN NN I N NN+ + + N+ NN
Sbjct: 388 PPQYSQSPQNNNFNNNNNNISNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 447
Query: 74 ENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLN 112
N + INN N + + TNN TN+ +N N+ N
Sbjct: 448 NNNNNNINNSTNNNNNNSNTNNNTNTNTNNNNNKNNNNN 486
>pir||T17414 TipC protein - slime mold (Dictyostelium discoideum)
gb|AAC31916.1| (AF079445) TipC [Dictyostelium discoideum]
Length = 3848
Score = 42.4 bits (98), Expect = 0.001
Identities = 25/95 (26%), Positives = 43/95 (44%), Gaps = 2/95 (2%)
Query: 18 FSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKI 77
+S K + K S + N+ I + + Q NND+ K ++++ K N+ NN N
Sbjct: 2177 YSQQKKDKKNKSNDYDNDEII--EDTVEQVNNDLIKPADDQKNNNNNKNDNNNNNNNNNN 2234
Query: 78 DEINNEENADPSQKRTNNVLQRATNHQDNLNSPLN 112
+ NN N + + NN N+ +N N+ N
Sbjct: 2235 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNN 2269
>ref|NP_473285.1| (NC_000521) hypothetical protein, PFC0760c [Plasmodium falciparum]
pir||T18501 hypothetical protein C0760c - malaria parasite (Plasmodium
falciparum)
emb|CAB11140.1| (Z98551) hypothetical protein, PFC0760c [Plasmodium falciparum 3D7]
Length = 3394
Score = 42.4 bits (98), Expect = 0.001
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 22 KDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNEN-KIDEI 80
K+E S + NN I K+N IN NN+ + D ND INN+N D I
Sbjct: 2836 KNENYPVSTHYDNNDDINKDN-INNDNNNDNINDDNNNDNINNDNNNDNINNDNINNDNI 2894
Query: 81 NNEENADPSQKRTNN--VLQRATNHQDNLNSPLN 112
NN+ N D + +NN V + ++N D N+ LN
Sbjct: 2895 NNDNNNDNNNDNSNNGFVCELSSNIND-FNNILN 2927
>gb|AAG21921.1|AF179276_2 (AF179276) pawn B-II [Paramecium tetraurelia]
Length = 268
Score = 42.0 bits (97), Expect = 0.001
Identities = 29/114 (25%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 4 KITHFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKI--EHEEEDE 61
K + I F+ F K + + ++ ++ K T+ D+ KI EHE +
Sbjct: 151 KSVEYYTIQFI---FKDSKVDTLEYNELRESKLKFTEITTFLDQQKDLGKIRIEHELDPY 207
Query: 62 KATKEVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRKY 115
++L NN N D+ NN ++ +Q+ N V Q++ +Q+N S + KY
Sbjct: 208 YQFANNSNLNNNNNNNDKNNNSDSQKINQQELNKVNQQSYYNQENQKSTIEEKY 261
>gb|AAM34377.1| (AC117082) C31E10.8 PROTEIN. [Dictyostelium discoideum]
Length = 986
Score = 42.0 bits (97), Expect = 0.001
Identities = 22/86 (25%), Positives = 40/86 (45%)
Query: 27 KSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENA 86
+S ++ NN + ++ + N I K EE+++ +T N+ NN N + NN N
Sbjct: 810 ESKDNNNNNNTLDNDSTVEGKQNIIIKNNSEEQEDSSTSNNNNNNNNNNNNNNNNNNNNN 869
Query: 87 DPSQKRTNNVLQRATNHQDNLNSPLN 112
+ + NN N+ +N N+ N
Sbjct: 870 NNNNNNNNNNNNNNNNNNNNNNNNNN 895
>gb|AAK54088.2|AF362369_1 (AF362369) histidine kinase DhkG [Dictyostelium discoideum]
Length = 3432
Score = 42.0 bits (97), Expect = 0.001
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 3/93 (3%)
Query: 17 LFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENK 76
+ S + P SSQ HQNN I NN N NN+ + + N NN N
Sbjct: 2941 MLSPLPNSPLSSSQQHQNNNNINNNNINNNNNNNNNNNNNNNNNNNNNNNNN---NNNNN 2997
Query: 77 IDEINNEENADPSQKRTNNVLQRATNHQDNLNS 109
+ NN N +N+ N+ N NS
Sbjct: 2998 NNNNNNNNNGVGLSINLSNLNNHNHNNSHNNNS 3030
>gb|AAM33693.1| (AC117076) putative protein [Dictyostelium discoideum]
Length = 1043
Score = 41.6 bits (96), Expect = 0.002
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 4/92 (4%)
Query: 23 DEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENK--IDEI 80
++ K +++ NN NN NQ N + + + EED + ++ND +N+ K + ++
Sbjct: 878 NKEKDIIKNNNNNNNNNNNNNNNQKNKNNKN--NNEEDNFSVNKINDNVNDNEKKEVVKV 935
Query: 81 NNEENADPSQKRTNNVLQRATNHQDNLNSPLN 112
NN N + + NN N+ +N N+ N
Sbjct: 936 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 967
Score = 39.7 bits (91), Expect = 0.006
Identities = 26/89 (29%), Positives = 41/89 (45%), Gaps = 3/89 (3%)
Query: 28 SSQSHQNNTKITKNNPIN--QANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEEN 85
++ ++ NN + KNN N + N + KI D + KEV + NN N + NN N
Sbjct: 892 NNNNNNNNNQKNKNNKNNNEEDNFSVNKINDNVNDNEK-KEVVKVNNNNNNNNNNNNNNN 950
Query: 86 ADPSQKRTNNVLQRATNHQDNLNSPLNRK 114
+ + NN N+ +N N+ N K
Sbjct: 951 NNNNNNNNNNNNNNNNNNNNNNNNNNNNK 979
>ref|NP_563078.1| (NC_003366) 2`,3`-cyclic-nucleotide 2`-phosphodiesterase
[Clostridium perfringens]
dbj|BAB81868.1| (AP003193) 2`,3`-cyclic-nucleotide 2`-phosphodiesterase
[Clostridium perfringens]
Length = 725
Score = 41.6 bits (96), Expect = 0.002
Identities = 24/67 (35%), Positives = 38/67 (55%), Gaps = 4/67 (5%)
Query: 23 DEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINN 82
+E KK + N + KNN N +N D ++ ED K+ KEVN+ N +N I+E++
Sbjct: 633 EESKKDVPKVEENIEKQKNNKENNSNGDNTLVK---EDSKS-KEVNEKNNEQNNIEEVSK 688
Query: 83 EENADPS 89
+EN P+
Sbjct: 689 KENKLPN 695
>gb|AAL92340.1| (AC115600) hypothetical protein [Dictyostelium discoideum]
Length = 930
Score = 41.6 bits (96), Expect = 0.002
Identities = 23/87 (26%), Positives = 42/87 (47%), Gaps = 1/87 (1%)
Query: 27 KSSQSHQNNTKITKNNPINQANNDIRKIEHE-EEDEKATKEVNDLINNENKIDEINNEEN 85
K+ +++NN+ KNN N NN+ I + + +N+ NN+N + NN +N
Sbjct: 715 KNYYNNKNNSINNKNNNNNNINNNNNNINNSINNNNNINNSINNNNNNKNNNNNNNNNKN 774
Query: 86 ADPSQKRTNNVLQRATNHQDNLNSPLN 112
+ + NN N+ +N N+ +N
Sbjct: 775 NNNNNNNNNNNNNNNNNNNNNNNNNIN 801
Score = 40.8 bits (94), Expect = 0.003
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Query: 26 KKSSQSHQNNTKI--TKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNE 83
KK ++ NN KNN IN NN+ I + + +N+ INN N I+ N
Sbjct: 705 KKVYNNNNNNKNYYNNKNNSINNKNNNNNNINNNNNN------INNSINNNNNINNSINN 758
Query: 84 ENADPSQKRTNNVLQRATNHQDNLNSPLN 112
N + + NN + N+ +N N+ N
Sbjct: 759 NNNNKNNNNNNNNNKNNNNNNNNNNNNNN 787
Score = 39.3 bits (90), Expect = 0.008
Identities = 23/87 (26%), Positives = 40/87 (45%), Gaps = 6/87 (6%)
Query: 26 KKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEEN 85
K ++ ++ NN NN N NN+ + + +N+ INN N + INN N
Sbjct: 763 KNNNNNNNNNKNNNNNNNNNNNNNNNNNNNNNNNNNNINNSINNSINN-NINNSINNNIN 821
Query: 86 ADPSQKRTNNVLQRATNHQDNLNSPLN 112
+ NN+ N+ +N+N+ +N
Sbjct: 822 NINNNNNINNI-----NNNNNINNSIN 843
>gb|AAL92993.1| (AC116030) hypothetical protein [Dictyostelium discoideum]
Length = 340
Score = 41.2 bits (95), Expect = 0.002
Identities = 22/91 (24%), Positives = 41/91 (44%), Gaps = 4/91 (4%)
Query: 22 KDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEIN 81
K++ + + NN NN N NN+ + + N+ NN+N + N
Sbjct: 202 KNDNNNDNDDNNNNNNNNNNNNNNNNNNN----NNNNNNNNNNNNNNNNNNNDNNDNNDN 257
Query: 82 NEENADPSQKRTNNVLQRATNHQDNLNSPLN 112
N+ N++ + K TNN ++ + N+N +N
Sbjct: 258 NDNNSNINNKETNNDQKKTKKTKKNVNKKVN 288
>gb|AAM34352.1| (AC117082) hypothetical protein [Dictyostelium discoideum]
Length = 828
Score = 41.2 bits (95), Expect = 0.002
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
S+ ++QN NN N NN+ + +D K N+ NN N + NN N +
Sbjct: 192 SNHNNQNGNNNNNNNNNNNNNNNNNNNNNNVDDSKTNNNNNNNNNNNNNNNNNNNNNNNN 251
Query: 88 PSQKRTNNVLQRATNHQDNLNSPLN 112
+ NN N+ +N N+ N
Sbjct: 252 NNNNNNNNNNNNNNNNNNNNNNNNN 276
>gb|AAD17489.2| (AF052006) C-module-binding factor; CMBF [Dictyostelium discoideum]
Length = 1000
Score = 41.2 bits (95), Expect = 0.002
Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 12/85 (14%)
Query: 31 SHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENADPSQ 90
++ NN+ NN IN NN+ +N+ NN N + INN N + +
Sbjct: 574 NNNNNSNNNNNNNINNNNNN------------NNNNINNNNNNMNNNNSINNNNNNNNNN 621
Query: 91 KRTNNVLQRATNHQDNLNSPLNRKY 115
NN + +H +N N+ LN Y
Sbjct: 622 NINNNNINNNNHHNNNGNNNLNSSY 646
>ref|NP_473051.1| (NC_000910) predicted membrane associated protein [Plasmodium
falciparum]
pir||C71610 probable membrane associated protein PFB0615c - malaria parasite
(Plasmodium falciparum)
gb|AAC71912.1| (AE001406) predicted membrane associated protein [Plasmodium
falciparum 3D7]
Length = 2013
Score = 41.2 bits (95), Expect = 0.002
Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 22 KDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEIN 81
K++ KK ++ N K + I N I + +EE++EK +E N+ NE K ++IN
Sbjct: 211 KEKKKKKKKTDNKNEKKKGHMEIKDVNEKINEKINEEKNEKINEEKNE-EKNEEKNEKIN 269
Query: 82 NEENADPSQKRTNNVLQRATN-----HQDNLNSPL 111
E+N + ++K N TN ++N N PL
Sbjct: 270 EEKNEEKNEK-INEEKNEDTNKDPYEEKENDNIPL 303
Score = 39.7 bits (91), Expect = 0.006
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 11/102 (10%)
Query: 22 KDEPKKSSQSHQN-NTKITKNNPINQANND-IRKIEHEEEDEKATKEVNDLINNEN--KI 77
K+E KK ++ N KI N IN+ N+ I + ++EE++E+ +++N+ N E KI
Sbjct: 223 KNEKKKGHMEIKDVNEKI--NEKINEEKNEKINEEKNEEKNEEKNEKINEEKNEEKNEKI 280
Query: 78 DEINNE-ENADPSQKRTNNVLQRATNHQDNLN----SPLNRK 114
+E NE N DP +++ N+ + +H N S LN+K
Sbjct: 281 NEEKNEDTNKDPYEEKENDNIPLGDHHSVQYNIFTFSILNKK 322
>ref|NP_326524.1| (NC_002771) MEMBRANE NUCLEASE, LIPOPROTEIN [Mycoplasma pulmonis]
emb|CAC13866.1| (AL445565) MEMBRANE NUCLEASE, LIPOPROTEIN [Mycoplasma pulmonis]
Length = 1125
Score = 41.2 bits (95), Expect = 0.002
Identities = 30/112 (26%), Positives = 47/112 (41%), Gaps = 19/112 (16%)
Query: 22 KDEPKKSSQSHQNNTKIT-------------KNNPINQANNDIR--KIEHEEEDEKATKE 66
+D+ KK S + QNN+ T KNN I ND + + + D + +KE
Sbjct: 502 QDDSKKISDASQNNSNTTNEKDQKLDSQDESKNNAIKSQQNDQKDSNLSSSKNDTQPSKE 561
Query: 67 ----VNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRK 114
+N + N +I NN EN D ++ T+N Q + + L K
Sbjct: 562 SSPQINPNLENNQEISHSNNGENDDSKEQNTSNSRQTKNDLRSEQKQNLTTK 613
>gb|AAM33690.1| (AC117076) TRANSCRIPTION FACTOR DP1. 6/101 [Dictyostelium
discoideum]
Length = 657
Score = 41.2 bits (95), Expect = 0.002
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKI-DEINNEENA 86
++ ++ NN NN N NN+ + + ++ + +D INN +I DE ++
Sbjct: 32 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQSNSQHDDTINNTQEIEDESPSQSPT 91
Query: 87 DPSQKRTNNVLQRATNHQDNLN 108
P+ NN+ +TN+ +N N
Sbjct: 92 YPNNSNNNNINSTSTNNNNNNN 113
>gb|AAL92689.1|AC115682_16 (AC115682) hypothetical protein [Dictyostelium discoideum]
Length = 901
Score = 41.2 bits (95), Expect = 0.002
Identities = 29/90 (32%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 28 SSQSHQNNTKITKN-NPINQANNDIRKIEHEEEDEKATKEV----NDLINNENKIDEINN 82
++++++NNT +N N N +NN+ +E+EEE E +++ N+ NN N ++ NN
Sbjct: 815 NNKNNKNNTNNLENDNNDNSSNNNY--LENEEEPEIVFQDIKPNNNNNNNNNNNNNDDNN 872
Query: 83 EENADPSQKRTNNVLQRATNHQDNLNSPLN 112
+N D + NN N+ DN NS N
Sbjct: 873 NDNNDNNDNENNN-----DNNNDNENSNNN 897
>sp|P18160|KYK1_DICDI Non-receptor tyrosine kinase spore lysis A (Tyrosine-protein kinase
1)
pir||T18276 non-receptor tyrosine kinase - slime mold (Dictyostelium
discoideum)
gb|AAB41125.1| (U32174) non-receptor tyrosine kinase [Dictyostelium discoideum]
Length = 1584
Score = 40.8 bits (94), Expect = 0.003
Identities = 28/113 (24%), Positives = 43/113 (37%), Gaps = 2/113 (1%)
Query: 4 KITHFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKA 63
KIT S S + +D ++ ++ NN NN N NN+ +
Sbjct: 426 KITTTTTTSTSPSSINNNEDISSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNSNSSNTN 485
Query: 64 TKEVNDLINNENKIDEINNEENADPSQKRT--NNVLQRATNHQDNLNSPLNRK 114
+N+ NN N NN N S + NN+ N+ +N N L +K
Sbjct: 486 NNNINNTTNNNNSNSNNNNNNNNSNSNSNSNNNNINNNNNNNNNNNNIYLTKK 538
>gb|AAK17065.1| (AF244123) fibronectin binding autolysin [Staphylococcus caprae]
Length = 1395
Score = 40.8 bits (94), Expect = 0.003
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 18/92 (19%)
Query: 22 KDEPKKSSQSHQNNTKITKNNPINQ-----ANNDIRKIEHEEEDEKATKEVNDLINNENK 76
K+ S ++Q++TK KNN I++ +N+ K+++ KEV++ E+
Sbjct: 119 KETNTSSVNTYQDSTKDIKNNEISKDAVTSEDNETSKVDN------TNKEVSETEQQEST 172
Query: 77 IDEINNEENADPSQKRTNNVLQRATNHQDNLN 108
++ +N +EN +NN +Q ++N +NLN
Sbjct: 173 VENVNKDEN-------SNNNIQASSNQTNNLN 197
>gb|AAM33753.1| (AC116961) hypothetical protein [Dictyostelium discoideum]
Length = 868
Score = 40.8 bits (94), Expect = 0.003
Identities = 24/87 (27%), Positives = 41/87 (46%), Gaps = 1/87 (1%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
++ +++NN K NN N NN+ + + N+ NN N+I+ INN N +
Sbjct: 127 NNNNNKNNNKNKNNNNNNNYNNNNNNNNNNNNNNNNNNNNNNN-NNNNRINNINNNINNN 185
Query: 88 PSQKRTNNVLQRATNHQDNLNSPLNRK 114
+ R N + N+ +N N+ N K
Sbjct: 186 NNNNRINEDNKNNNNNNNNNNNNNNNK 212
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/85 (24%), Positives = 37/85 (42%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
++ ++ NN NN N NN+ ++ ++ N+ NN N + NN N +
Sbjct: 103 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNKNKNNNNNNNYNNNNNNNNNNNNNNNN 162
Query: 88 PSQKRTNNVLQRATNHQDNLNSPLN 112
+ NN R N +N+N+ N
Sbjct: 163 NNNNNNNNNNNRINNINNNINNNNN 187
Score = 39.3 bits (90), Expect = 0.008
Identities = 21/98 (21%), Positives = 36/98 (36%)
Query: 18 FSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKI 77
F + ++ ++ NN NN N NN+ + + ++ NN N
Sbjct: 49 FGNTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNFYNIFNNNNNN 108
Query: 78 DEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRKY 115
+ NN N + + NN N+ N N+ N Y
Sbjct: 109 NNNNNNNNNNNNNNNNNNNNNNNKNNNKNKNNNNNNNY 146
>gb|AAL92295.1| (AC115593) hypothetical protein [Dictyostelium discoideum]
Length = 2472
Score = 40.4 bits (93), Expect = 0.004
Identities = 23/85 (27%), Positives = 36/85 (42%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
S+ S+ NN I+ NN N NN+ + + N+ NN N + NN N +
Sbjct: 471 SNNSNNNNNSISGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 530
Query: 88 PSQKRTNNVLQRATNHQDNLNSPLN 112
+ NN N+ +N N+ N
Sbjct: 531 NNNNNNNNNNNNNNNNNNNNNNNNN 555
>emb|CAB62846.2| (AL035475) hypothetical protein [Plasmodium falciparum 3D7]
Length = 1734
Score = 40.4 bits (93), Expect = 0.004
Identities = 24/69 (34%), Positives = 39/69 (55%), Gaps = 2/69 (2%)
Query: 27 KSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENA 86
K+ + + N KI KN N+ N + +K E++E++E KE ND N K DE N+E+N
Sbjct: 1141 KNEEGYSNTDKILKNEK-NEKNVNEKKGENDEKNENEKKEENDEKNVNEKKDE-NDEKNE 1198
Query: 87 DPSQKRTNN 95
+ + +N
Sbjct: 1199 NEKKDENDN 1207
>gb|AAM33216.1| (AC116965) CG5792 PROTEIN. 6/101 [Dictyostelium discoideum]
Length = 1422
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/85 (24%), Positives = 37/85 (42%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
++ S+ NN + NN N +NN+ + + N+ NN N + NN N +
Sbjct: 380 NNNSNNNNNNNSNNNNNNNSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 439
Query: 88 PSQKRTNNVLQRATNHQDNLNSPLN 112
+ NN N+ +N N+ +N
Sbjct: 440 NNNNNNNNNNNNNNNNNNNNNNNIN 464
>gb|AAM44369.1| (AC123513) putative protein contains similarity to
topoisomerase-related function protein [Dictyostelium
discoideum]
Length = 1880
Score = 40.4 bits (93), Expect = 0.004
Identities = 26/91 (28%), Positives = 41/91 (44%), Gaps = 8/91 (8%)
Query: 22 KDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEIN 81
KD+ + ++Q + NN NN N NN+I + + N+ INN N I N
Sbjct: 1269 KDKERDNNQKNNNNNNNDNNN--NNNNNNINNNNNNTSNNNNNNNNNN-INNNNNISNNN 1325
Query: 82 NEENADPSQKRTNNVLQRATNHQDNLNSPLN 112
N N + + NN N+ +N N+ +N
Sbjct: 1326 NNNNNNNNNNNNNN-----NNNINNNNNTMN 1351
>gb|AAL93044.1|AC116032_33 (AC116032) hypothetical protein [Dictyostelium discoideum]
Length = 614
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/80 (26%), Positives = 36/80 (44%)
Query: 33 QNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENADPSQKR 92
Q N++ + NN +N NN++ + + N+ NN N + NN N + +
Sbjct: 79 QPNSQSSINNNLNNNNNNLNNYYNNNNNNNNNNNNNNNNNNNNINNNNNNNNNINNNNNN 138
Query: 93 TNNVLQRATNHQDNLNSPLN 112
NN N+ +N N+P N
Sbjct: 139 NNNNNNNNNNNNNNNNNPKN 158
>gb|AAM33177.1| (AC117072) POLYCOMBLIKE 2. 9/101 [Dictyostelium discoideum]
Length = 635
Score = 40.4 bits (93), Expect = 0.004
Identities = 26/87 (29%), Positives = 41/87 (46%), Gaps = 6/87 (6%)
Query: 23 DEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINN 82
D+ ++++ QNN NN N NN+I I + + +N+ INN N + INN
Sbjct: 105 DDRYNTNKNIQNNNNNNNNNNYNN-NNNINNIINNNSNTN-NSNINNNINNNNNNNNINN 162
Query: 83 EENADPSQKRTNNVLQRATNHQDNLNS 109
N + + TNN + N+NS
Sbjct: 163 NINNNTNNSNTNN----SNTGNSNINS 185
>emb|CAB62853.1| (AL035475) hypothetical protein MAL4P2.12 [Plasmodium falciparum
3D7]
Length = 1212
Score = 40.4 bits (93), Expect = 0.004
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 19/110 (17%)
Query: 22 KDEPKKSSQSHQNNTKITKNNPINQANND--IRKIEHE-------------EEDEKATKE 66
K+E S + +N ++ K N +N+ NND + KI H+ E
Sbjct: 829 KNESLSSLHNIKNESENNKYNKMNETNNDYYLNKIGHDVNNFLNILFDKKNEMMNNKNSV 888
Query: 67 VNDLINNENKID----EINNEENADPSQKRTNNVLQRATNHQDNLNSPLN 112
VN + ++NK+D INN N + + K NN N+ +N N+ N
Sbjct: 889 VNSMYTSDNKLDITHNNINNNNNNNNNNKNNNNNNNNDKNNNNNNNNNNN 938
>emb|CAB62859.1| (AL035475) hypothetical protein MAL4P2.18 [Plasmodium falciparum
3D7]
Length = 622
Score = 40.4 bits (93), Expect = 0.004
Identities = 29/101 (28%), Positives = 45/101 (43%), Gaps = 7/101 (6%)
Query: 22 KDEPKKSSQSHQNNTKITK-NNPINQANNDIRKIEHEE-----EDEKATKEVNDLINNEN 75
KD+ KK H NNT + N I D + I+ E+ + + +L+N+ N
Sbjct: 380 KDDKKKIKDYHMNNTSVKGLNEEIKSIKEDRKHIQFSLDNKIIENNEMKQRNTELLNDNN 439
Query: 76 KIDEINNE-ENADPSQKRTNNVLQRATNHQDNLNSPLNRKY 115
KI EIN E N + +L+R + + + LN KY
Sbjct: 440 KIKEINKELINEKLYLSKEMEILERKLKESNEMYNLLNDKY 480
Score = 39.3 bits (90), Expect = 0.008
Identities = 26/87 (29%), Positives = 42/87 (47%), Gaps = 6/87 (6%)
Query: 23 DEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINN 82
+E + + + NN +NN I+ NN+ +E + + ND INN D INN
Sbjct: 110 EELSEQNYNDCNNINKNENNKIDSINNNDNINNNENINNNDSINNNDNINNN---DNINN 166
Query: 83 EENADPSQKRTNNVLQRATNHQDNLNS 109
EN + ++ NN N+ DN+N+
Sbjct: 167 NENINNNENINNN---DNINNNDNINN 190
>gb|AAL92971.1| (AC116028) hypothetical protein [Dictyostelium discoideum]
Length = 722
Score = 40.4 bits (93), Expect = 0.004
Identities = 21/87 (24%), Positives = 38/87 (43%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
++ ++ NN NN N NN+ + + N+ NN+N NN +N +
Sbjct: 636 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNQNNNNNQNNN 695
Query: 88 PSQKRTNNVLQRATNHQDNLNSPLNRK 114
+ NN N+Q+N+N+ + K
Sbjct: 696 NNNTNINNHNNNNINNQNNINNSIKCK 722
>gb|AAL88717.1|AC114257_2 (AC114257) hypothetical protein [Dictyostelium discoideum]
Length = 261
Score = 40.4 bits (93), Expect = 0.004
Identities = 22/88 (25%), Positives = 37/88 (42%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
++ ++ NN NN N NN+ + + N+ NN N + NN+ N +
Sbjct: 174 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNKNNNN 233
Query: 88 PSQKRTNNVLQRATNHQDNLNSPLNRKY 115
+ NN N+ +N N+ N KY
Sbjct: 234 SNNNNDNNNNNNNNNNNNNNNNNKNLKY 261
>gb|AAK63225.1|AF325156_1 (AF325156) merozoite surface protein 8 [Plasmodium falciparum]
Length = 604
Score = 40.0 bits (92), Expect = 0.005
Identities = 22/80 (27%), Positives = 41/80 (50%), Gaps = 2/80 (2%)
Query: 33 QNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENADPSQKR 92
+N T +NNP N N ++ +++D+ K+VN ++ N + NN +N +
Sbjct: 26 ENGTTNIENNPGN--NGNMGPSGPKDKDKNIEKDVNHNMSMNNNNNNNNNNDNNNNINNN 83
Query: 93 TNNVLQRATNHQDNLNSPLN 112
NN + TN+ +N+N+ N
Sbjct: 84 NNNNINNNTNNNNNINNNNN 103
>gb|AAM45260.1| (AC116978) Hypothetical 178.4 kDa protein [Dictyostelium
discoideum]
Length = 2625
Score = 40.0 bits (92), Expect = 0.005
Identities = 24/73 (32%), Positives = 34/73 (45%), Gaps = 3/73 (4%)
Query: 40 KNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENADPSQKRTNNVLQR 99
KNN IN NN+ I +E E T+ N+ NN N + NN N + + NN
Sbjct: 729 KNNQINNNNNN---INNENNKENLTQSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN 785
Query: 100 ATNHQDNLNSPLN 112
N+ +N N+ N
Sbjct: 786 NNNNNNNNNNNNN 798
>gb|AAL92600.1|AC115678_1 (AC115678) NEUROFIBROMATOSIS PROTEIN TYPE I [Dictyostelium
discoideum]
Length = 1728
Score = 39.7 bits (91), Expect = 0.006
Identities = 23/89 (25%), Positives = 39/89 (42%), Gaps = 7/89 (7%)
Query: 31 SHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENADPSQ 90
+++NN NN N NN+ + + N+ NN N + NN EN++ ++
Sbjct: 240 TNENNNSSNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNENSNNNE 299
Query: 91 KRTNNVLQRAT-------NHQDNLNSPLN 112
+TN+ +T HQ SP+N
Sbjct: 300 IKTNSSPNSSTINIVVPQQHQHQQTSPIN 328
>gb|AAL93601.1| (AC116101) hypothetical protein [Dictyostelium discoideum]
Length = 1407
Score = 39.7 bits (91), Expect = 0.006
Identities = 21/94 (22%), Positives = 39/94 (41%)
Query: 19 SACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKID 78
S+ + P ++ ++ NN NN N NN+ ++ + N + + KI
Sbjct: 1085 SSSSNLPTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNQNNNNNQNNNNNQNKSQQQKIP 1144
Query: 79 EINNEENADPSQKRTNNVLQRATNHQDNLNSPLN 112
NN N + + NN N+ +N+N+ N
Sbjct: 1145 NNNNNNNNNNNNNNNNNNNNNNNNNNNNINNNNN 1178
>gb|AAM09367.1| (AC117077) hypothetical protein [Dictyostelium discoideum]
Length = 1204
Score = 39.7 bits (91), Expect = 0.006
Identities = 25/114 (21%), Positives = 45/114 (38%), Gaps = 6/114 (5%)
Query: 1 MKSKITHFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEED 60
M+ + ++ LFS ++ + + ++ NN + NN N NN + +
Sbjct: 940 MRDYLESYVDDLLASQLFSIVENFNNQQNNNNNNNNNNSNNNNNNNNNNSNNNNNNNNNN 999
Query: 61 EKATKEVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRK 114
N+ NN N + NN N + + NN N+ +N N+ N K
Sbjct: 1000 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN------NNNNNKNNRTNNK 1047
>ref|NP_473100.1| (NC_000910) RNA helicase [Plasmodium falciparum]
pir||C71604 RNA helicase PFB0860c - malaria parasite (Plasmodium falciparum)
gb|AAC71961.1| (AE001421) RNA helicase [Plasmodium falciparum 3D7]
Length = 562
Score = 39.7 bits (91), Expect = 0.006
Identities = 24/91 (26%), Positives = 42/91 (45%), Gaps = 7/91 (7%)
Query: 23 DEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINN 82
+E KK + +++ KI K + I+K EH+ E +K K +N N N + N+
Sbjct: 29 EEIKKMDEEYEH--KIKKKEQLKLQKKQIKKQEHKNEKKKKNKNLNKKHNQNNTNNSDNS 86
Query: 83 EENADPSQKRTNNVLQRA-----TNHQDNLN 108
N+D + + N + N+ DN+N
Sbjct: 87 FHNSDNNINQNGNYTNNSDYNIINNNHDNIN 117
>ref|NP_282836.1| (NC_002163) hypothetical protein Cj1710c [Campylobacter jejuni]
pir||B81269 hypothetical protein Cj1710c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73696.1| (AL139079) hypothetical protein Cj1710c [Campylobacter jejuni]
Length = 664
Score = 39.7 bits (91), Expect = 0.006
Identities = 21/83 (25%), Positives = 43/83 (51%), Gaps = 3/83 (3%)
Query: 23 DEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINN 82
DE K+ +++ QN +KNN + N +K+ ++E T +++ N NK + N+
Sbjct: 4 DENKEINKNEQNPNSNSKNNKRYKYKNRRKKLADSLQNENDTPKID---QNSNKENSENS 60
Query: 83 EENADPSQKRTNNVLQRATNHQD 105
E + +K+ N+ + T ++D
Sbjct: 61 ENKTEKKKKKNRNLPSKLTGNED 83
>gb|AAD38875.1|AF110007_2 (AF110007) transcription factor [Molgula oculata]
Length = 556
Score = 39.3 bits (90), Expect = 0.008
Identities = 25/92 (27%), Positives = 45/92 (48%), Gaps = 14/92 (15%)
Query: 27 KSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKE--------VNDLINNENKID 78
K+ + +QNN + N IN++ N IE+++ +K E + + +N+NKI
Sbjct: 395 KNDKENQNNIDKKQTNEINKSKN----IENQQNTKKINSERIPDVKNNPSPIASNQNKIS 450
Query: 79 EINNEENADPSQKRTNNVLQRATNHQDNLNSP 110
E ++E D R NN++ + +N SP
Sbjct: 451 E--SDEGRDSKASRLNNIISKMAPVTENNRSP 480
>emb|CAC03100.1| (X53023) erythrocyte membrane-associated antigen [Plasmodium
falciparum]
Length = 514
Score = 39.3 bits (90), Expect = 0.008
Identities = 28/86 (32%), Positives = 40/86 (45%), Gaps = 6/86 (6%)
Query: 27 KSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVN-DLINNENKIDEINNEEN 85
K++ ++ NN K NN N NND ++ D N D NN NK ++ NN +N
Sbjct: 345 KNNDNNNNNNKNNDNNNNNNKNNDNNNNNNKNNDNNNNNNKNNDNNNNNNKNNDNNNGDN 404
Query: 86 ADPSQKRTNNVLQRATNHQDNLNSPL 111
D + N L R + D+ N PL
Sbjct: 405 VDYEE----NSLPRMCS-VDHRNRPL 425
>emb|CAA73586.1| (Y13119) pleiotropic effects on cellular differentiation and slug
behaviour [Dictyostelium discoideum]
Length = 791
Score = 39.3 bits (90), Expect = 0.008
Identities = 18/65 (27%), Positives = 34/65 (51%)
Query: 45 NQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQ 104
++ NN I+ I+ +++ ++ V + INN N I+ NN N + + NN N+
Sbjct: 356 DKENNIIQLIQQQQQQQQLLNNVTNNINNNNNINNNNNNNNNNNNNNNNNNNNNNNNNNN 415
Query: 105 DNLNS 109
+N N+
Sbjct: 416 NNNNN 420
>sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kinase) (PtdIns-4-kinase)
(PI4K-alpha)
pir||T18275 1-phosphatidylinositol 3-kinase (EC 2.7.1.137) 4 - slime mold
(Dictyostelium discoideum)
gb|AAA85725.1| (U23479) phosphatidylinositol 4-kinase [Dictyostelium discoideum]
Length = 1093
Score = 39.3 bits (90), Expect = 0.008
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 18/89 (20%)
Query: 22 KDEPKKSSQS-HQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEI 80
+++PKK S + NN I NN N NN+ N+++ NEN + I
Sbjct: 176 ENDPKKDINSNNNNNNNINNNNSNNDDNNN-----------------NEILPNENSDNSI 218
Query: 81 NNEENADPSQKRTNNVLQRATNHQDNLNS 109
N+E N + NN+ N + ++NS
Sbjct: 219 NDENNQYGNSNNNNNISGENNNIKIDINS 247
>emb|CAB39037.2| (AL034559) hypothetical protein, PFC0960c [Plasmodium falciparum
3D7]
Length = 1946
Score = 39.3 bits (90), Expect = 0.008
Identities = 26/110 (23%), Positives = 50/110 (44%), Gaps = 2/110 (1%)
Query: 6 THFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATK 65
T+++ + S+ S DE KK+S +N + + +D IE+ EE+ +
Sbjct: 211 TNYVCQDEIHSIISP--DEEKKNSLQSLSNQNLEIAYELTSNGDDEYIIENNEENNEENN 268
Query: 66 EVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRKY 115
E N+ NNE +E N E N + + N+ ++ ++ N+ N +
Sbjct: 269 EENNEENNEENNEENNKENNKEYNNDNNNDNYSYYNSYNNSHNNSHNNSH 318
>pir||T18277 kinesin heavy chain - slime mold (Dictyostelium discoideum)
gb|AAB07748.1| (U41289) K7 kinesin-like protein [Dictyostelium discoideum]
Length = 1254
Score = 39.3 bits (90), Expect = 0.008
Identities = 22/62 (35%), Positives = 35/62 (55%), Gaps = 4/62 (6%)
Query: 35 NTKITKNNPINQANNDIRKIEHEEEDEKAT-KEVNDLINNENKIDEINNEENADPSQKRT 93
N++I+ N+ + N ++IE+ E+ K ++ND INN N +DE NN N D +
Sbjct: 418 NSQISSNHSFD---NTFKEIENTCENSKIIFDDLNDHINNNNNVDENNNTNNNDNNNNDN 474
Query: 94 NN 95
NN
Sbjct: 475 NN 476
>gb|AAK54092.2|AF362373_1 (AF362373) histidine kinase DhkL [Dictyostelium discoideum]
Length = 1709
Score = 39.3 bits (90), Expect = 0.008
Identities = 22/82 (26%), Positives = 35/82 (41%), Gaps = 5/82 (6%)
Query: 28 SSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENAD 87
++ ++ NN NN ++NN+ K D T N+ NN N + NN N +
Sbjct: 73 NNNNNNNNNNNNNNNNEEKSNNETEKTLESNGDTTTTTTTNNNNNNNNNNNNNNNNNNNN 132
Query: 88 PSQKRTNNVLQRATNHQDNLNS 109
+ NN N+ +N NS
Sbjct: 133 NNNNNNNN-----NNNNNNTNS 149
>ref|NP_472959.1| (NC_000910) Ser/Thr protein kinase [Plasmodium falciparum]
pir||H71621 serine/threonine-specific protein kinase (EC 2.7.1.-) PFB0150c -
malaria parasite (Plasmodium falciparum)
gb|AAC71820.1| (AE001376) Ser/Thr protein kinase [Plasmodium falciparum 3D7]
Length = 2485
Score = 39.3 bits (90), Expect = 0.008
Identities = 26/94 (27%), Positives = 45/94 (47%), Gaps = 3/94 (3%)
Query: 23 DEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEE-EDEKATKEVNDLINNENKIDEIN 81
+E + +NN K + N N+ NN+ E+ E +E+ +E N+ N EN E N
Sbjct: 1638 NEKNNEKNNEKNNEKNNEKN--NEKNNEKNNEENNEGNNEENNEENNEENNEENNDIEKN 1695
Query: 82 NEENADPSQKRTNNVLQRATNHQDNLNSPLNRKY 115
+ ++ + Q + N ++ TN+ D N N Y
Sbjct: 1696 DIKDNNSGQVKENIIVMNNTNNMDVDNDDNNNNY 1729
>ref|NP_473200.1| (NC_000521) predicted using hexExon; MAL3P3.4 (PFC0340w), DNA
polymerase delta small subunit, len: 499 aa; Similarity
to DNA polymerase delta, small subunits. A.thaliana DNA
polymerase delta, small subunit (TR:O48520) BLAST Score:
345, sum P(3) = 1.3e->
pir||T18428 hypothetical protein C0340w - malaria parasite (Plasmodium
falciparum)
emb|CAB11105.1| (Z98547) putative DNA polymerase delta small subunit [Plasmodium
falciparum 3D7]
Length = 498
Score = 39.3 bits (90), Expect = 0.008
Identities = 31/111 (27%), Positives = 50/111 (44%), Gaps = 11/111 (9%)
Query: 2 KSKITHFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDE 61
K K HF ++ C ++ S + KI K + + ++K EE +E
Sbjct: 31 KIKKKHFEYVNLSERFIITCPTYTQQFSHIYSLRIKIMKTLLMRTIEDIVKK---EEGNE 87
Query: 62 KATKEVN-DLINNENKI--DEINNEENADPSQKRTNNVLQRATNHQDNLNS 109
K K +N D INN + I D INN +N + +N+ N+ DN+N+
Sbjct: 88 KKKKNINNDNINNNDNINNDNINNNDNINNDNINNDNI-----NNNDNINN 133
>ref|NP_010279.1| (NC_001136) RNA Polymerase II transcriptional regulation mediator;
Med2p [Saccharomyces cerevisiae]
pir||S50977 hypothetical protein YDL005c - yeast (Saccharomyces cerevisiae)
emb|CAA88056.1| (Z48008) unknown [Saccharomyces cerevisiae]
emb|CAA88354.1| (Z48432) unknown [Saccharomyces cerevisiae]
emb|CAA98561.1| (Z74053) ORF YDL005c [Saccharomyces cerevisiae]
Length = 431
Score = 39.3 bits (90), Expect = 0.008
Identities = 22/75 (29%), Positives = 36/75 (47%), Gaps = 2/75 (2%)
Query: 34 NNTKITK--NNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINNEENADPSQK 91
N+TK K NN N+ NN K ++ ED + ++ NN N + NN++N + +
Sbjct: 287 NSTKNGKDNNNESNKNNNGDEKNKNNNEDNENNNNSSEKNNNNNNNNNNNNDDNGNNNNN 346
Query: 92 RTNNVLQRATNHQDN 106
+ N TN+ N
Sbjct: 347 NSGNDNNNTTNNDSN 361
>ref|NP_472985.1| (NC_000910) hypothetical protein [Plasmodium falciparum]
pir||D71618 hypothetical protein PFB0285c - malaria parasite (Plasmodium
falciparum)
gb|AAC71846.1| (AE001385) hypothetical protein [Plasmodium falciparum 3D7]
Length = 1436
Score = 39.3 bits (90), Expect = 0.008
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 17/84 (20%)
Query: 40 KNNPINQANNDIRKIEHEEEDEKATK--------EVNDLINNENKIDEINNEENADPSQK 91
K N I+ NN + K+++ E++E K N +INN N ++ +NN N +
Sbjct: 945 KKNQIDVVNNKVMKLDNMEDEEAMNKLSLISLYPNNNHIINNVNNVNNVNNVNNVN---- 1000
Query: 92 RTNNVLQRATNHQDNLNSPLNRKY 115
NNV N+ +N+N+ N Y
Sbjct: 1001 NVNNV-----NNVNNVNNVNNVNY 1019
>ref|NP_473326.1| (NC_000521) predicted using hexExon; MAL3P7.21 (PFC0960c),
Hypothetical protein, len: 1929 aa [Plasmodium
falciparum]
Length = 1928
Score = 39.3 bits (90), Expect = 0.008
Identities = 26/110 (23%), Positives = 50/110 (44%), Gaps = 2/110 (1%)
Query: 6 THFIAISFVLSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATK 65
T+++ + S+ S DE KK+S +N + + +D IE+ EE+ +
Sbjct: 211 TNYVCQDEIHSIISP--DEEKKNSLQSLSNQNLEIAYELTSNGDDEYIIENNEENNEENN 268
Query: 66 EVNDLINNENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLNRKY 115
E N+ NNE +E N E N + + N+ ++ ++ N+ N +
Sbjct: 269 EENNEENNEENNEENNKENNKEYNNDNNNDNYSYYNSYNNSHNNSHNNSH 318
>gb|AAC05577.1| (AF051898) coronin binding protein [Dictyostelium discoideum]
Length = 560
Score = 39.3 bits (90), Expect = 0.008
Identities = 20/90 (22%), Positives = 39/90 (43%)
Query: 23 DEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNENKIDEINN 82
++ K ++ ++ NN+ NN + NN+ I + + + N+ NN + + N+
Sbjct: 381 NDNKNNNSNNNNNSNNNSNNGNSNNNNNNNIINNNNSNSNSNNNSNNNSNNNSNRNSPNH 440
Query: 83 EENADPSQKRTNNVLQRATNHQDNLNSPLN 112
N D NN N+ +N N+ N
Sbjct: 441 NNNGDNDNNTNNNTNNNNNNNNNNNNNNNN 470
>ref|NP_473257.1| (NC_000521) predicted using hexExon; MAL3P5.8 (PFC0610c),
Hypothetical protein, len: 1182 aa [Plasmodium
falciparum]
emb|CAB38971.1| (AL034556) hypothetical protein, PFC0610c [Plasmodium falciparum
3D7]
Length = 1181
Score = 39.3 bits (90), Expect = 0.008
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 14/99 (14%)
Query: 28 SSQSHQNNTKITKNNPINQAN-NDI---------RKIEHEEED----EKATKEVNDLINN 73
++ ++ NN NN IN ++ N++ K E+E ED E K ND NN
Sbjct: 748 TNNNNNNNNNNNNNNSINNSSKNEVSQKNGKDNENKNENENEDKNKNEDEDKNKNDDHNN 807
Query: 74 ENKIDEINNEENADPSQKRTNNVLQRATNHQDNLNSPLN 112
+ + D +N N+ + +NN +N+ N NS N
Sbjct: 808 KKEDDNDDNNNNSSNNNNNSNNSSNNNSNNNSNNNSNNN 846
>ref|NP_472952.1| (NC_000910) predicted secreted protein [Plasmodium falciparum]
pir||A71623 probable secreted protein PFB0115w - malaria parasite (Plasmodium
falciparum)
gb|AAC71813.1| (AE001373) predicted secreted protein [Plasmodium falciparum 3D7]
Length = 1192
Score = 39.3 bits (90), Expect = 0.008
Identities = 29/94 (30%), Positives = 42/94 (43%), Gaps = 6/94 (6%)
Query: 15 LSLFSACKDEPKKSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVNDLINNE 74
L L ++ + PK SQ +++ K TKN I + NN + +EK ++ L N E
Sbjct: 50 LQLGASTINTPKTQSQENKDINKETKNTIIKKTNNFPSTL-----NEKFPHKI-QLTNKE 103
Query: 75 NKIDEINNEENADPSQKRTNNVLQRATNHQDNLN 108
NK DE N E D K Q + Q+ N
Sbjct: 104 NKEDEQNKENKKDEQNKEDEQNKQNKEDEQNKQN 137
>pir||S23692 erythrocyte membrane-associated antigen (clone pPf K16) -
Plasmodium falciparum (fragment)
Length = 518
Score = 39.3 bits (90), Expect = 0.008
Identities = 28/86 (32%), Positives = 40/86 (45%), Gaps = 6/86 (6%)
Query: 27 KSSQSHQNNTKITKNNPINQANNDIRKIEHEEEDEKATKEVN-DLINNENKIDEINNEEN 85
K++ ++ NN K NN N NND ++ D N D NN NK ++ NN +N
Sbjct: 347 KNNDNNNNNNKNNDNNNNNNKNNDNNNNNNKNNDNNNNNNKNNDNNNNNNKNNDNNNGDN 406
Query: 86 ADPSQKRTNNVLQRATNHQDNLNSPL 111
D + N L R + D+ N PL
Sbjct: 407 VDYEE----NSLPRMCS-VDHRNRPL 427
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.304 0.122 0.325
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,283,223
Number of Sequences: 1026957
Number of extensions: 2938254
Number of successful extensions: 34920
Number of sequences better than 1.0e-02: 68
Number of HSP's better than 0.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 30912
Number of HSP's gapped (non-prelim): 1517
length of query: 115
length of database: 324,149,939
effective HSP length: 91
effective length of query: 24
effective length of database: 230,696,852
effective search space: 5536724448
effective search space used: 5536724448
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 90 (39.3 bits)