BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646174|ref|NP_208358.1| conserved hypothetical
GTP-binding protein [Helicobacter pylori 26695]
(208 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_208358.1| (NC_000915) conserved hypothetical GTP-bin... 412 e-114
ref|NP_224193.1| (NC_000921) putative [Helicobacter pylori ... 396 e-110
ref|NP_281833.1| (NC_002163) putative ATP /GTP binding prot... 161 5e-39
ref|NP_073003.1| (NC_000908) conserved hypothetical GTP-bin... 105 2e-22
ref|NP_622293.1| (NC_003869) predicted GTPases [Thermoanaer... 103 9e-22
ref|NP_110169.1| (NC_000912) GTP binding, era like [Mycopla... 101 5e-21
ref|NP_607090.1| (NC_003485) conserved hypothetical GTP-bin... 101 6e-21
ref|NP_254179.1| (NC_002516) conserved hypothetical protein... 100 8e-21
ref|NP_269085.1| (NC_002737) conserved hypothetical GTP-bin... 100 2e-20
gb|EAA02598.1| (AAAB01005721) ebiP181 [Anopheles gambiae st... 99 2e-20
ref|NP_663029.1| (NC_002932) GTP-binding protein [Chlorobiu... 97 9e-20
ref|NP_562305.1| (NC_003366) probable GTP binding protein [... 95 4e-19
ref|NP_349243.1| (NC_003030) Predicted GTPase, YSXC B.subti... 95 6e-19
ref|NP_359019.1| (NC_003098) Conserved hypothetical protein... 94 1e-18
ref|NP_346015.1| (NC_003028) GTP-binding protein [Streptoco... 94 1e-18
sp|P24253|ENGB_ECOLI Probable GTP-binding protein engB 92 3e-18
ref|NP_220494.1| (NC_000963) unknown [Rickettsia prowazekii... 92 3e-18
ref|NP_312814.1| (NC_002695) essential GTPase for cell cycl... 92 3e-18
ref|NP_521109.1| (NC_003295) PROBABLE GTP-BINDING PROTEIN [... 92 3e-18
ref|NP_458048.1| (NC_003198) ATP/GTP-binding protein [Salmo... 92 3e-18
sp|Q9L6G1|ENGB_LACLC Probable GTP-binding protein engB >gi|... 92 4e-18
ref|NP_267308.1| (NC_002662) GTP-binding protein [Lactococc... 92 4e-18
ref|NP_439275.1| (NC_000907) conserved hypothetical GTP-bin... 91 8e-18
ref|NP_602804.1| (NC_003454) GTP-binding protein [Fusobacte... 90 1e-17
ref|NP_246450.1| (NC_002663) unknown [Pasteurella multocida... 88 5e-17
ref|NP_078100.1| (NC_002162) conserved hypothetical ATP/GTP... 87 9e-17
ref|NP_565543.1| (NM_127852) putative nucleotide-binding pr... 87 1e-16
sp|O81004|YB87_ARATH Hypothetical GTP-binding protein At2g2... 87 1e-16
ref|NP_541251.1| (NC_003318) GTP-BINDING PROTEIN CGPA [Bruc... 87 1e-16
ref|NP_418301.1| (NC_000913) orf, hypothetical protein [Esc... 87 1e-16
ref|NP_326070.1| (NC_002771) GTP-BINDING PROTEIN [Mycoplasm... 87 1e-16
ref|NP_290489.1| (NC_002655) orf, hypothetical protein [Esc... 87 1e-16
ref|NP_229770.1| (NC_002505) conserved hypothetical protein... 87 1e-16
ref|NP_390697.1| (NC_000964) similar to hypothetical protei... 87 2e-16
ref|NP_240244.1| (NC_002528) hypothetical GTP-binding prote... 87 2e-16
ref|NP_298719.1| (NC_002488) GTP-binding protein [Xylella f... 86 2e-16
ref|NP_372197.1| (NC_002758) conserved hypothetical protein... 86 2e-16
ref|NP_646434.1| (NC_003923) conserved hypothetical protein... 86 2e-16
sp|Q9PDE9|ENGB_XYLFA Probable GTP-binding protein engB 86 2e-16
ref|NP_403685.1| (NC_003143) conserved hypothetical protein... 86 3e-16
ref|NP_229266.1| (NC_000853) conserved hypothetical protein... 86 3e-16
sp|Q9RNL6|ENGB_ZYMMO Probable GTP-binding protein engB >gi|... 85 5e-16
sp|Q9JY03|ENGB_NEIMB Probable GTP-binding protein engB 84 8e-16
ref|NP_283463.1| (NC_003116) putative GTP-binding protein [... 84 8e-16
ref|NP_274803.1| (NC_003112) conserved hypothetical protein... 84 8e-16
gb|AAB52537.1| (U72876) hypothetical GTPase [Neisseria gono... 84 1e-15
ref|NP_384549.1| (NC_003047) HYPOTHETICAL GTP-BINDING PROTE... 84 1e-15
sp|O05132|ENGB_NEIGO Probable GTP-binding protein engB 84 1e-15
ref|NP_353414.1| (NC_003062) AGR_C_672p [Agrobacterium tume... 84 1e-15
ref|NP_359775.1| (NC_003103) hypothetical GTP-binding prote... 83 2e-15
ref|NP_105600.1| (NC_002678) GTP-binding protein [Mesorhizo... 83 2e-15
gb|AAC69623.1| (AF084242) GTP-binding protein; CgpA [Caulob... 82 4e-15
ref|NP_465083.1| (NC_003210) similar to hypothetical GTP bi... 82 5e-15
ref|NP_419583.1| (NC_002696) GTP-binding protein CgpA [Caul... 82 5e-15
ref|NP_470929.1| (NC_003212) similar to hypothetical GTP bi... 81 8e-15
ref|NP_660751.1| (NC_004061) hypothetical GTP-binding prote... 80 1e-14
ref|NP_243915.1| (NC_002570) GTP-binding protein [Bacillus ... 80 2e-14
ref|NP_196709.1| (NM_121186) putative GTP-binding protein [... 77 2e-13
gb|AAM64748.1| (AY087192) putative GTP-binding protein [Ara... 77 2e-13
ref|NP_658500.1| (NC_003995) MMR_HSR1, GTPase of unknown fu... 76 3e-13
ref|NP_641078.1| (NC_003919) GTP-binding protein [Xanthomon... 75 4e-13
ref|NP_638743.1| (NC_003902) GTP-binding protein [Xanthomon... 75 4e-13
gb|AAM33711.1| (AC117076) PUTATIVE GTP-BINDING PROTEIN CGPA... 75 6e-13
ref|NP_214245.1| (NC_000918) hypothetical protein [Aquifex ... 74 1e-12
ref|NP_568876.1| (NM_125222) contains similarity to GTP-bin... 67 2e-10
dbj|BAA96928.2| (AB019228) contains similarity to GTP-bindi... 65 6e-10
gb|AAM19136.1|AC103891_16 (AC103891) Putative nucleotide bi... 65 6e-10
ref|XP_148358.1| (XM_148358) hypothetical protein XP_148358... 55 4e-07
dbj|BAB89927.1| (AP003309) putative GTP-binding protein [Or... 54 9e-07
ref|XP_039952.2| (XM_039952) HSPC135 protein [Homo sapiens] 49 3e-05
ref|NP_281151.1| (NC_002607) Vng2587c [Halobacterium sp. NR... 47 1e-04
gb|AAF23374.1| (AF189713) MLL septin-like fusion protein MS... 45 5e-04
ref|NP_006631.1| (NM_006640) MLL septin-like fusion; MLL se... 45 5e-04
emb|CAC42222.1| (AJ312320) OVARIAN/Breast septin delta [Hom... 45 5e-04
dbj|BAB14057.1| (AK022493) unnamed protein product [Homo sa... 45 5e-04
ref|NP_059076.1| (NM_017380) MLL septin-like fusion; SL3-3 ... 45 5e-04
emb|CAC42221.1| (AJ312319) OVARIAN/Breast septin gamma [Hom... 45 5e-04
ref|NP_010623.1| (NC_001136) Hypothetical ORF; Ydr336wp [Sa... 45 5e-04
dbj|BAA76835.1| (AB023208) KIAA0991 protein [Homo sapiens] ... 45 5e-04
ref|NP_613494.1| (NC_003551) Predicted GTPase of the YihA f... 45 5e-04
gb|AAF01207.1|AF180526_1 (AF180526) E-septin short form [Ra... 45 7e-04
ref|NP_114025.1| (NM_031837) E-septin [Rattus norvegicus] >... 45 7e-04
gb|AAF03376.1|AF170253_1 (AF170253) septin-like protein [Ra... 45 7e-04
gb|AAF03391.1|AF173899_1 (AF173899) septin-like protein SLP... 45 7e-04
dbj|BAB01956.1| (AP002063) GTP-binding protein-like [Arabid... 44 9e-04
ref|NP_247293.1| (NC_000909) conserved hypothetical protein... 44 9e-04
ref|NP_107728.1| (NC_002678) GTP-binding protei [Mesorhizob... 44 0.001
ref|NP_623074.1| (NC_003869) predicted GTPases [Thermoanaer... 44 0.001
ref|NP_113427.1| (NC_002753) hypothetical protein [Guillard... 43 0.002
ref|NP_562623.1| (NC_003366) conserved hypothetical protein... 43 0.003
ref|NP_484527.1| (NC_003272) GTP binding protein [Nostoc sp... 43 0.003
sp|P39827|CC10_CANAL Cell division control protein 10 >gi|5... 43 0.003
ref|NP_662663.1| (NC_002932) GTP-binding protein [Chlorobiu... 42 0.003
pir||S43278 cell division control protein CDC10 - yeast (Ca... 42 0.003
ref|NP_488860.1| (NC_003272) hypothetical protein [Nostoc s... 42 0.003
ref|NP_484788.1| (NC_003272) hypothetical protein [Nostoc s... 42 0.004
emb|CAC32261.1| (AL583933) MMR_HSR1 GTP-binding protein [Le... 42 0.004
ref|NP_009928.1| (NC_001135) cell division cycle blocked at... 42 0.004
ref|NP_441526.1| (NC_000911) hypothetical protein [Synechoc... 42 0.004
ref|NP_347088.1| (NC_003030) Ferrous iron transport protein... 42 0.006
sp|Q9V288|ENGB_PYRAB Probable GTP-binding protein engB 42 0.006
ref|NP_471385.1| (NC_003212) similar to unknown protein [Li... 41 0.007
ref|NP_406380.1| (NC_003143) putative GTP-binding protein [... 41 0.007
ref|NP_465461.1| (NC_003210) similar to unknown protein [Li... 41 0.007
ref|NP_187815.1| (NM_112042) GTPase, putative [Arabidopsis ... 41 0.010
sp|P40797|PNUT_DROME Peanut protein >gi|2133645|pir||A54294... 41 0.010
ref|NP_594754.1| (NC_003424) septin homolog spn1 [Schizosac... 41 0.010
ref|NP_477064.1| (NM_057716) pnut-P1; Peanut; septin; Enhan... 41 0.010
ref|NP_577843.1| (NC_003413) GTP-binding protein [Pyrococcu... 41 0.010
pir||T38815 septin homolog spn1 - fission yeast (Schizosacc... 41 0.010
>ref|NP_208358.1| (NC_000915) conserved hypothetical GTP-binding protein
[Helicobacter pylori 26695]
sp|O26087|ENGB_HELPY Probable GTP-binding protein engB
pir||G64715 conserved hypothetical ATP-binding protein HP1567 - Helicobacter
pylori (strain 26695)
gb|AAD08606.1| (AE000654) conserved hypothetical GTP-binding protein [Helicobacter
pylori 26695]
Length = 208
Score = 412 bits (1059), Expect = e-114
Identities = 208/208 (100%), Positives = 208/208 (100%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTR 60
MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTR
Sbjct: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTR 60
Query: 61 LANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH 120
LANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH
Sbjct: 61 LANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH 120
Query: 121 LVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTA 180
LVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTA
Sbjct: 121 LVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTA 180
Query: 181 HFNALSSKYPTLEIVRQTLLKHLLTNPL 208
HFNALSSKYPTLEIVRQTLLKHLLTNPL
Sbjct: 181 HFNALSSKYPTLEIVRQTLLKHLLTNPL 208
>ref|NP_224193.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZJ42|ENGB_HELPJ Probable GTP-binding protein engB
pir||D71802 hypothetical protein jhp1475 - Helicobacter pylori (strain J99)
gb|AAD07059.1| (AE001569) putative [Helicobacter pylori J99]
Length = 208
Score = 396 bits (1017), Expect = e-110
Identities = 198/208 (95%), Positives = 203/208 (97%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTR 60
MIVIKDAHFLTSS+ L QCPASLTSEMV+LGRSNVGKS+FINTLLGKNLAKSSATPGKTR
Sbjct: 1 MIVIKDAHFLTSSNNLSQCPASLTSEMVILGRSNVGKSTFINTLLGKNLAKSSATPGKTR 60
Query: 61 LANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH 120
LANFFSTTWEDKENAL TFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH
Sbjct: 61 LANFFSTTWEDKENALTTTFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH 120
Query: 121 LVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTA 180
L+DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINT
Sbjct: 121 LIDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTI 180
Query: 181 HFNALSSKYPTLEIVRQTLLKHLLTNPL 208
HFNALSSKYPTLEIVRQTLLK+LLTNPL
Sbjct: 181 HFNALSSKYPTLEIVRQTLLKYLLTNPL 208
>ref|NP_281833.1| (NC_002163) putative ATP /GTP binding protein [Campylobacter
jejuni]
sp|Q9PHL7|ENGB_CAMJE Probable GTP-binding protein engB
pir||A81414 probable ATP /GTP binding protein Cj0650 [imported] - Campylobacter
jejuni (strain NCTC 11168)
emb|CAB75286.1| (AL139075) putative ATP /GTP binding protein [Campylobacter jejuni]
Length = 198
Score = 161 bits (407), Expect = 5e-39
Identities = 98/198 (49%), Positives = 125/198 (62%), Gaps = 5/198 (2%)
Query: 3 VIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRL 61
+I A F+TS + + +S SE+ LGRSNVGKSS IN+L KNLAKSSATPGKT+L
Sbjct: 1 MIISAKFITSLVKFDENLSSNFSEVAFLGRSNVGKSSLINSLCKQKNLAKSSATPGKTQL 60
Query: 62 ANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHL 121
NFF + N + N IDLPGFGYAKVSK+LK+ W L E L +R SIKLFIHL
Sbjct: 61 INFFEVIC--RRNEEKFNINFIDLPGFGYAKVSKNLKEIWNQNLDEFLKLRTSIKLFIHL 118
Query: 122 VDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTAH 181
+D+RH LEID N + ++ LRPDQ L +FTK DKLN++E+ +L L++ +
Sbjct: 119 IDSRHTHLEIDVNLNDYLKRFLRPDQKILKVFTKCDKLNQSEKAKLKNEFKDSILVSNLN 178
Query: 182 FNALSSKYPTLEIVRQTL 199
L S I+ QTL
Sbjct: 179 KFGLDSLEDI--IINQTL 194
>ref|NP_073003.1| (NC_000908) conserved hypothetical GTP-binding protein [Mycoplasma
genitalium]
sp|P47577|ENGB_MYCGE Probable GTP-binding protein engB
pir||A64237 hypothetical protein homolog MG335 - Mycoplasma genitalium
gb|AAC71558.1| (U39714) conserved hypothetical GTP-binding protein [Mycoplasma
genitalium]
Length = 191
Score = 105 bits (263), Expect = 2e-22
Identities = 61/160 (38%), Positives = 97/160 (60%), Gaps = 14/160 (8%)
Query: 6 DAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFF 65
DAHFL S+S L CP E+ +GRSNVGKSS IN K LAK+SATPG+T+L N+F
Sbjct: 2 DAHFLKSASDLKDCPQDNIPEICFMGRSNVGKSSLINAFFKKKLAKTSATPGRTQLLNYF 61
Query: 66 STTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
++DK +DLPG+G+AK++K+ K L + L+ R ++ + +VD+
Sbjct: 62 E--YKDK--------RFVDLPGYGFAKINKNKKDFITNLLTQFLNFRSNLVGVVLIVDSG 111
Query: 126 HLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQH 165
+ ++ +E ++ +L+ +L + KFDKLN++E++
Sbjct: 112 VVTVQ----DQEVVKIILQTGLNFLIVANKFDKLNQSERY 147
>ref|NP_622293.1| (NC_003869) predicted GTPases [Thermoanaerobacter tengcongensis]
gb|AAM23897.1| (AE013031) predicted GTPases [Thermoanaerobacter tengcongensis]
Length = 194
Score = 103 bits (258), Expect = 9e-22
Identities = 65/177 (36%), Positives = 99/177 (55%), Gaps = 13/177 (7%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLA 62
IK A F+ S+ Q P ++ ++G+SNVGKS+ INT+LG KNLAK S+TPGKTR
Sbjct: 3 IKTAEFVGSAFNESQYPKDKIPQIAIVGKSNVGKSTLINTVLGRKNLAKVSSTPGKTRGI 62
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
NF+ + F ++DLPG+GYAKVSK +KK+W + L+ ++K + L+
Sbjct: 63 NFY---------LVNRAFYIVDLPGYGYAKVSKEMKKQWAYNIETFLNTSKNLKHALLLI 113
Query: 123 DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINT 179
D R E D + + + + TK DK+NK+E ++ N + F I++
Sbjct: 114 DIRREPTEDDFMM---VNWFSFKNLPFSVVLTKADKVNKSEANKAIENICRSFNISS 167
>ref|NP_110169.1| (NC_000912) GTP binding, era like [Mycoplasma pneumoniae]
sp|P75303|ENGB_MYCPN Probable GTP-binding protein engB
pir||S73686 hypothetical protein yihA - Mycoplasma pneumoniae (strain ATCC
29342)
gb|AAB96008.1| (AE000034) GTP binding, era like [Mycoplasma pneumoniae]
Length = 193
Score = 101 bits (252), Expect = 5e-21
Identities = 60/159 (37%), Positives = 93/159 (57%), Gaps = 14/159 (8%)
Query: 6 DAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFF 65
+A FL S+S L CP E+ +GRSNVGKSS IN K LAK+SATPG+T+L NFF
Sbjct: 2 EARFLKSASDLESCPQDSVKEVCFMGRSNVGKSSLINAFFQKKLAKTSATPGRTQLLNFF 61
Query: 66 STTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
R F +DLPG+G+AK+SK K+ L + L+ R ++ + ++D+
Sbjct: 62 EYN--------RKRF--VDLPGYGFAKLSKVQKEAITNLLTQFLNFRQNLTGVVLVIDSG 111
Query: 126 HLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
+ ++ +E ++ +L+ +L + KFDKLN++E+
Sbjct: 112 VVTVQ----DQEVVKTILQTGLNFLVIANKFDKLNQSER 146
>ref|NP_607090.1| (NC_003485) conserved hypothetical GTP-binding protein
[Streptococcus pyogenes MGAS8232]
gb|AAL97589.1| (AE010023) conserved hypothetical GTP-binding protein
[Streptococcus pyogenes MGAS8232]
Length = 199
Score = 101 bits (251), Expect = 6e-21
Identities = 66/165 (40%), Positives = 97/165 (58%), Gaps = 19/165 (11%)
Query: 6 DAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANF 64
+A L S++ P E+ + GRSNVGKSSFINT+LG KNLA++S+ PGKT+L NF
Sbjct: 11 NASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNF 70
Query: 65 FSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDA 124
F+ +DK +D+PG+GYAKVSKS + EW + E L+ R +++ + LVD
Sbjct: 71 FNI--DDK-------LRFVDVPGYGYAKVSKSERAEWGKMIEEYLTSRDNLRAVVSLVDL 121
Query: 125 RHLDLEIDKNAKENIQA---LLRPDQAYLSLFTKFDKLNKNEQHR 166
RH +KE+IQ L D + + TK DK+ + + ++
Sbjct: 122 RHAP------SKEDIQMYDFLKYYDIPVIVVATKADKIPRGKWNK 160
>ref|NP_254179.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
sp|Q9HT81|ENGB_PSEAE Probable GTP-binding protein engB
pir||E82958 conserved hypothetical protein PA5492 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG08877.1|AE004962_1 (AE004962) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 215
Score = 100 bits (250), Expect = 8e-21
Identities = 64/153 (41%), Positives = 85/153 (54%), Gaps = 12/153 (7%)
Query: 7 AHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFS 66
A FL S++Q+ QCP E+ GRSN GKSS +NTL NLA++S TPG+T+L NFF
Sbjct: 14 ASFLISAAQVDQCPPDEGLEVAFAGRSNAGKSSALNTLTHANLARTSKTPGRTQLLNFF- 72
Query: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126
AL + ++DLPG+GYAKV LK+ W+ L LS R S+ ++D RH
Sbjct: 73 --------ALDDSRRLVDLPGYGYAKVPIPLKQHWQRHLEAYLSSRASLAGVFLMMDIRH 124
Query: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKL 159
+ D+ + QA P L TK DKL
Sbjct: 125 PLTDFDRLMLDWAQASQLPIHV---LMTKADKL 154
>ref|NP_269085.1| (NC_002737) conserved hypothetical GTP-binding protein
[Streptococcus pyogenes] [Streptococcus pyogenes M1 GAS]
gb|AAK33806.1| (AE006538) conserved hypothetical GTP-binding protein
[Streptococcus pyogenes M1 GAS]
Length = 199
Score = 99.8 bits (247), Expect = 2e-20
Identities = 65/165 (39%), Positives = 97/165 (58%), Gaps = 19/165 (11%)
Query: 6 DAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANF 64
+A L S++ P E+ + GRSNVGKSSFINT+LG KNLA++S+ PGKT+L NF
Sbjct: 11 NASILLSAANKSHYPQDDLPEIALAGRSNVGKSSFINTILGRKNLARTSSKPGKTQLLNF 70
Query: 65 FSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDA 124
F+ +DK +D+PG+GYAKVSKS + +W + E L+ R +++ + LVD
Sbjct: 71 FNI--DDK-------LRFVDVPGYGYAKVSKSERAKWGKMIEEYLTSRDNLRAVVSLVDL 121
Query: 125 RHLDLEIDKNAKENIQA---LLRPDQAYLSLFTKFDKLNKNEQHR 166
RH +KE+IQ L D + + TK DK+ + + ++
Sbjct: 122 RHAP------SKEDIQMYDFLKYYDIPVIVVATKADKIPRGKWNK 160
>gb|EAA02598.1| (AAAB01005721) ebiP181 [Anopheles gambiae str. PEST]
Length = 191
Score = 99.4 bits (246), Expect = 2e-20
Identities = 64/159 (40%), Positives = 91/159 (56%), Gaps = 13/159 (8%)
Query: 2 IVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTR 60
++IK F+ SSS+ +CP + E +GRSNVGKSS IN ++ K+LAK+S TPGKT+
Sbjct: 1 MLIKSVDFVKSSSKWQECPEANLPEYAFIGRSNVGKSSLINAMMDRKDLAKTSQTPGKTQ 60
Query: 61 LANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH 120
L N F + T+ + DLPG+GYAKVSK+L+K +E + + R ++
Sbjct: 61 LINHF---------LVNETWYLTDLPGYGYAKVSKTLRKSFEKLITNYILNRNNLVNLFV 111
Query: 121 LVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKL 159
LVD RH +ID E +Q + +FTK DKL
Sbjct: 112 LVDIRHAPQKID---IEFMQWCGESGIPFSIIFTKADKL 147
>ref|NP_663029.1| (NC_002932) GTP-binding protein [Chlorobium tepidum TLS]
gb|AAM73371.1| (AE012964) GTP-binding protein [Chlorobium tepidum TLS]
Length = 192
Score = 97.4 bits (241), Expect = 9e-20
Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 13/164 (7%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLA 62
I A F S S L P+ E+V +GRSNVGKSS +N+L K LAK+S+TPGKTRL
Sbjct: 3 ITTADFFCSYSSLNGLPSDGRPEIVFVGRSNVGKSSLLNSLCARKGLAKTSSTPGKTRLI 62
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
N+F + +DLPG+GYAKV + ++ W L + R I L + LV
Sbjct: 63 NYF---------IINDNLYFVDLPGYGYAKVGQGERESWGKLLTGYIQKRGEIALVVLLV 113
Query: 123 DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR 166
D+RH + D E + RP + + TK+DKL + E+ +
Sbjct: 114 DSRHPGMASDLEMMEFLDYCGRP---FGIVLTKWDKLKQAEKSK 154
>ref|NP_562305.1| (NC_003366) probable GTP binding protein [Clostridium perfringens]
dbj|BAB81095.1| (AP003190) probable GTP binding protein [Clostridium perfringens]
Length = 197
Score = 95.1 bits (235), Expect = 4e-19
Identities = 64/161 (39%), Positives = 84/161 (51%), Gaps = 13/161 (8%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKN-LAKSSATPGKTRLA 62
IK + F+ S+ + Q P E+ +GRSNVGKSS IN+L + LAK S TPGKTRL
Sbjct: 3 IKSSEFIISAVKREQYPDDNLPEIAFVGRSNVGKSSIINSLTNRRGLAKVSQTPGKTRLI 62
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
NFF L F ++DLPG+GYAKVSK K W + L R +K + LV
Sbjct: 63 NFF---------LLNKDFYLVDLPGYGYAKVSKKEKASWGATIERYLLNRGPLKKVVLLV 113
Query: 123 DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNE 163
D RH D E I+ + + TK DK++ N+
Sbjct: 114 DCRHKPTADDVQMYEWIK---HYGYEVVVIATKSDKISNNQ 151
>ref|NP_349243.1| (NC_003030) Predicted GTPase, YSXC B.subtilis ortholog [Clostridium
acetobutylicum]
gb|AAK80583.1|AE007761_2 (AE007761) Predicted GTPase, YSXC B.subtilis ortholog [Clostridium
acetobutylicum]
Length = 200
Score = 94.7 bits (234), Expect = 6e-19
Identities = 62/164 (37%), Positives = 87/164 (52%), Gaps = 13/164 (7%)
Query: 2 IVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKN-LAKSSATPGKTR 60
++IK A F+ S++ Q P E+ +GRSNVGKSS IN + + L K S TPGKTR
Sbjct: 1 MIIKQAEFIISAAWKKQFPIDGKDEIAFVGRSNVGKSSLINAITNRRKLVKVSGTPGKTR 60
Query: 61 LANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH 120
L NFF + F +DLPG+GYAKVSK ++W + L R +K I
Sbjct: 61 LVNFFM---------INNDFYFVDLPGYGYAKVSKKELEKWSQTIEGYLVGREQLKKVIL 111
Query: 121 LVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
LVD+RH + D I+ D + + TK DK+ ++E+
Sbjct: 112 LVDSRHKPTKDDITMYNWIKYY---DYKCIVIATKSDKIKRSEK 152
>ref|NP_359019.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAL00230.1| (AE008512) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 197
Score = 94.0 bits (232), Expect = 1e-18
Identities = 52/122 (42%), Positives = 76/122 (61%), Gaps = 10/122 (8%)
Query: 6 DAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANF 64
+A L S++ P E+ + GRSNVGKSSFINT+L KNLA++S PGKT+L NF
Sbjct: 9 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 68
Query: 65 FSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDA 124
F+ +DK +D+PG+GYA+VSK +++W + E L+ R +++ + LVD
Sbjct: 69 FNI--DDK-------MRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDL 119
Query: 125 RH 126
RH
Sbjct: 120 RH 121
>ref|NP_346015.1| (NC_003028) GTP-binding protein [Streptococcus pneumoniae TIGR4]
gb|AAK75655.1| (AE007451) GTP-binding protein [Streptococcus pneumoniae TIGR4]
Length = 195
Score = 94.0 bits (232), Expect = 1e-18
Identities = 52/122 (42%), Positives = 76/122 (61%), Gaps = 10/122 (8%)
Query: 6 DAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANF 64
+A L S++ P E+ + GRSNVGKSSFINT+L KNLA++S PGKT+L NF
Sbjct: 7 NAEILLSAANKSHYPQDELPEIALAGRSNVGKSSFINTMLNRKNLARTSGKPGKTQLLNF 66
Query: 65 FSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDA 124
F+ +DK +D+PG+GYA+VSK +++W + E L+ R +++ + LVD
Sbjct: 67 FNI--DDK-------MRFVDVPGYGYARVSKKEREKWGCMIEEYLTTRENLRAVVSLVDL 117
Query: 125 RH 126
RH
Sbjct: 118 RH 119
>sp|P24253|ENGB_ECOLI Probable GTP-binding protein engB
Length = 210
Score = 92.4 bits (228), Expect = 3e-18
Identities = 56/156 (35%), Positives = 89/156 (56%), Gaps = 13/156 (8%)
Query: 5 KDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLAN 63
+ HF+ S+ + P+ E+ GRSN GKSS +NTL K+LA++S TPG+T+L N
Sbjct: 7 QQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLIN 66
Query: 64 FFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVD 123
F + ++DLPG+GYA+V + +K++W+ L E L R S++ + L+D
Sbjct: 67 LFEVADGKR---------LVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMD 117
Query: 124 ARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKL 159
RH ++D ++ I+ + + A L L TK DKL
Sbjct: 118 IRHPLKDLD---QQMIEWAVDSNIAVLVLLTKADKL 150
>ref|NP_220494.1| (NC_000963) unknown [Rickettsia prowazekii]
sp|Q9ZE46|ENGB_RICPR Probable GTP-binding protein engB
pir||D71719 hypothetical protein RP102 - Rickettsia prowazekii
emb|CAA14571.1| (AJ235270) unknown [Rickettsia prowazekii]
Length = 214
Score = 92.4 bits (228), Expect = 3e-18
Identities = 60/158 (37%), Positives = 89/158 (55%), Gaps = 13/158 (8%)
Query: 7 AHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF 65
A F+ + + Q P E+V +G+SNVGKSS INT+ K+LAK S TPG+TR NFF
Sbjct: 24 AKFVAGAIHINQIPDFSLPEIVFVGKSNVGKSSIINTICNNKSLAKVSNTPGRTRQINFF 83
Query: 66 STTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
+ DK ++DLPG+G+A V S+K++WEG + L ++ L L+D+R
Sbjct: 84 NIV--DK-------LIIVDLPGYGFANVPISVKEQWEGLITYYLRNSHNLMLVNLLIDSR 134
Query: 126 HLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNE 163
I +N K+ + LL + + +FTK DK+ E
Sbjct: 135 R---GIKENDKKVAELLLANKREFQIIFTKSDKVTDRE 169
>ref|NP_312814.1| (NC_002695) essential GTPase for cell cycle [Escherichia coli
O157:H7]
sp|Q8X8H0|ENGB_ECO57 Probable GTP-binding protein engB
dbj|BAB38210.1| (AP002567) essential GTPase for cell cycle [Escherichia coli
O157:H7]
Length = 210
Score = 92.4 bits (228), Expect = 3e-18
Identities = 56/156 (35%), Positives = 89/156 (56%), Gaps = 13/156 (8%)
Query: 5 KDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLAN 63
+ HF+ S+ + P+ E+ GRSN GKSS +NTL K+LA++S TPG+T+L N
Sbjct: 7 QQTHFVMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLIN 66
Query: 64 FFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVD 123
F + ++DLPG+GYA+V + +K++W+ L E L R S++ + L+D
Sbjct: 67 LFEVADGKR---------LVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMD 117
Query: 124 ARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKL 159
RH ++D ++ I+ + + A L L TK DKL
Sbjct: 118 IRHPLKDLD---QQMIEWAVDSNIAVLVLLTKADKL 150
>ref|NP_521109.1| (NC_003295) PROBABLE GTP-BINDING PROTEIN [Ralstonia solanacearum]
emb|CAD16697.1| (AL646073) PROBABLE GTP-BINDING PROTEIN [Ralstonia solanacearum]
Length = 234
Score = 92.4 bits (228), Expect = 3e-18
Identities = 60/174 (34%), Positives = 89/174 (50%), Gaps = 7/174 (4%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKT 59
M ++ A F T+ + L PA+ E+ GRSN GKS+ IN L K LA SS TPG+T
Sbjct: 1 MSLLHQARFFTTVNHLRDLPATAVPEVAFAGRSNAGKSTAINVLCNQKRLAFSSKTPGRT 60
Query: 60 RLANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFI 119
+ N+FS AL ++DLPG+GYA+V K WE L + + R + +
Sbjct: 61 QHINYFSVM---PAKALDPLGFLVDLPGYGYAQVPGEAKSHWEHLLGDYIQTRSQLAGLV 117
Query: 120 HLVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPK 173
++DAR ++D + ++ L + L TK DKL N+ R ++A K
Sbjct: 118 IMMDARRPFTDLD---CQMVEWFLPTGKPIHVLLTKADKLTNNDASRALMSARK 168
>ref|NP_458048.1| (NC_003198) ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Typhi]
ref|NP_462881.1| (NC_003197) putative GTPase, involved in coordination of cell cycle
[Salmonella typhimurium LT2]
gb|AAL22840.1| (AE008887) putative GTPase, involved in coordination of cell cycle
[Salmonella typhimurium LT2]
emb|CAD03099.1| (AL627280) ATP/GTP-binding protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 210
Score = 92.4 bits (228), Expect = 3e-18
Identities = 56/156 (35%), Positives = 88/156 (55%), Gaps = 13/156 (8%)
Query: 5 KDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLAN 63
+ HF+ S+ + P+ E+ GRSN GKSS +NTL K+LA++S TPG+T+L N
Sbjct: 7 QQTHFVMSAPDIRHLPSDCGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLIN 66
Query: 64 FFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVD 123
F + ++DLPG+GYA+V + +K++W+ L E L R S++ + L+D
Sbjct: 67 LFEVVDGKR---------LVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMD 117
Query: 124 ARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKL 159
RH ++D ++ IQ + + L L TK DKL
Sbjct: 118 IRHPLKDLD---QQMIQWAVESNIQVLVLLTKADKL 150
>sp|Q9L6G1|ENGB_LACLC Probable GTP-binding protein engB
gb|AAF63739.1|AF236863_3 (AF236863) hypothetical GTP-binding protein [Lactococcus lactis]
Length = 195
Score = 92.0 bits (227), Expect = 4e-18
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 13/156 (8%)
Query: 12 SSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTTWE 70
S++ Q P + E+ + GRSNVGKSSFINTLL KN A++S PGKT+L NF++ +
Sbjct: 13 SAASKKQYPENDWPEIALAGRSNVGKSSFINTLLNRKNFARTSGQPGKTQLLNFYNI--D 70
Query: 71 DKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLE 130
D+ + +D+PG+GYA+VSK +++W + E L+ R ++K + LVD RH E
Sbjct: 71 DQ-------LHFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLKAVVSLVDIRHEPSE 123
Query: 131 IDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR 166
D E ++ P + + TK DK+ + + ++
Sbjct: 124 DDLMMYEFLKYYHIP---VILVATKADKVPRGKWNK 156
>ref|NP_267308.1| (NC_002662) GTP-binding protein [Lactococcus lactis subsp. lactis]
sp|Q9CGE5|ENGB_LACLA Probable GTP-binding protein engB
gb|AAK05250.1|AE006347_8 (AE006347) GTP-binding protein [Lactococcus lactis subsp. lactis]
Length = 195
Score = 92.0 bits (227), Expect = 4e-18
Identities = 58/156 (37%), Positives = 92/156 (58%), Gaps = 13/156 (8%)
Query: 12 SSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTTWE 70
S++ Q P + E+ + GRSNVGKSSFINTLL KN A++S PGKT+L NF++ +
Sbjct: 13 SAASKKQYPENDWPEIALAGRSNVGKSSFINTLLNRKNFARTSGQPGKTQLLNFYNI--D 70
Query: 71 DKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLE 130
D+ + +D+PG+GYA+VSK +++W + E L+ R ++K + LVD RH E
Sbjct: 71 DQ-------LHFVDVPGYGYARVSKKEREKWGKMIEEYLTTRENLKAVVSLVDIRHEPSE 123
Query: 131 IDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR 166
D E ++ P + + TK DK+ + + ++
Sbjct: 124 DDLMMYEFLKYYHIP---VILVATKADKVPRGKWNK 156
>ref|NP_439275.1| (NC_000907) conserved hypothetical GTP-binding protein [Haemophilus
influenzae Rd]
sp|P46453|ENGB_HAEIN Probable GTP-binding protein engB
gb|AAC22772.1| (U32792) conserved hypothetical GTP-binding protein [Haemophilus
influenzae Rd]
Length = 205
Score = 90.9 bits (224), Expect = 8e-18
Identities = 59/172 (34%), Positives = 92/172 (53%), Gaps = 16/172 (9%)
Query: 8 HFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFS 66
HFLTS+ + P E+ GRSN GKS+ +N L KNLA++S TPG+T+L N F
Sbjct: 12 HFLTSAPNIRSIPEDTGIEIAFAGRSNAGKSTALNALTNQKNLARTSKTPGRTQLINLFE 71
Query: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126
+ ++DLPG+GYA V + +K +W+ L E L R + + L+D RH
Sbjct: 72 ---------VEPNCKLVDLPGYGYAAVPEQMKIQWQKSLGEYLQKRECLAGLVVLMDIRH 122
Query: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLN---KNEQHRLFLNAPKPF 175
++D ++ I+ + + L L TK DKL+ +++Q ++ A PF
Sbjct: 123 PLKDLD---QQMIEWAVSANLPVLLLLTKADKLSQSARSKQVKMVREAILPF 171
>ref|NP_602804.1| (NC_003454) GTP-binding protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
gb|AAL94103.1| (AE010503) GTP-binding protein [Fusobacterium nucleatum subsp.
nucleatum ATCC 25586]
Length = 194
Score = 90.1 bits (222), Expect = 1e-17
Identities = 63/163 (38%), Positives = 88/163 (53%), Gaps = 15/163 (9%)
Query: 4 IKDAHFLTSSSQLFQCPASLTS-EMVVLGRSNVGKSSFINTLLGK-NLAKSSATPGKTRL 61
IK A F+ S+ P L E +GRSNVGKSS IN+L + LA++S TPG+T+L
Sbjct: 3 IKKADFVKSAVYEKDYPEQLDKMEFAFVGRSNVGKSSLINSLTSRLKLARTSKTPGRTQL 62
Query: 62 ANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHL 121
N+F E F ++DLPG+G+AKV K +KK+W G E KL L
Sbjct: 63 INYFLINDE---------FYIVDLPGYGFAKVPKEMKKQW-GQTMERYIASKRKKLVFVL 112
Query: 122 VDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
+D R + + D E ++ L + Y +FTK DKL+ NE+
Sbjct: 113 LDIRRVPSDED---IEMLEWLEYNEMDYKIIFTKIDKLSNNER 152
>ref|NP_246450.1| (NC_002663) unknown [Pasteurella multocida]
sp|P57947|ENGB_PASMU Probable GTP-binding protein engB
gb|AAK03595.1| (AE006188) unknown [Pasteurella multocida]
Length = 205
Score = 88.2 bits (217), Expect = 5e-17
Identities = 61/185 (32%), Positives = 98/185 (52%), Gaps = 18/185 (9%)
Query: 8 HFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFS 66
HFLTS+ + P E+ GRSN GKS+ +N L K+LA++S TPG+T+L N F
Sbjct: 12 HFLTSAPDIRALPEDSGIEIAFAGRSNAGKSTALNALTNQKSLARTSKTPGRTQLINLFE 71
Query: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126
+ ++DLPG+GYA V + +K +W+ L E L R + + L+D RH
Sbjct: 72 ---------VEPQCRLVDLPGYGYAAVPEQMKIQWQKALGEYLQKRQCLAGVVILMDIRH 122
Query: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLN---KNEQHRLFLNAPKPFL--INTAH 181
++D ++ I+ + + L L TK DKL+ +++Q ++ A PF +
Sbjct: 123 PLKDLD---QQMIEWAVASELPVLLLLTKADKLSQSARSKQVKMVREAILPFQGDVQVEA 179
Query: 182 FNALS 186
F+AL+
Sbjct: 180 FSALN 184
>ref|NP_078100.1| (NC_002162) conserved hypothetical ATP/GTP-binding protein
[Ureaplasma urealyticum]
sp|Q9PQM5|ENGB_UREPA Probable GTP-binding protein engB
pir||D82913 conserved hypothetical ATP/GTP-binding protein UU266 [imported] -
Ureaplasma urealyticum
gb|AAF30675.1|AE002123_8 (AE002123) conserved hypothetical ATP/GTP-binding protein
[Ureaplasma urealyticum]
Length = 208
Score = 87.4 bits (215), Expect = 9e-17
Identities = 58/173 (33%), Positives = 88/173 (50%), Gaps = 26/173 (15%)
Query: 7 AHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFS 66
A F+ S+ Q P E+ V+GRSNVGKSS IN L K +A++S TPG+T+L NFF
Sbjct: 2 AKFIKSAHYFDQYPIDKQFEICVIGRSNVGKSSLINALANKKIARTSNTPGRTQLVNFFD 61
Query: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126
F ++DLPG+G+AKVSK + + + + L R ++ + D
Sbjct: 62 FN----------NFRLVDLPGYGFAKVSKEKQTDLAAIIDQYLGYRQNLCAVFQICDINV 111
Query: 127 L---DLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNK----NEQHRL--FLN 170
L D+E+ + + A+ + K DK+NK N +H++ FLN
Sbjct: 112 LTNDDVEMSRYFENQ-------KYAHFVVLNKLDKVNKSYFNNNKHKIAKFLN 157
>ref|NP_565543.1| (NM_127852) putative nucleotide-binding protein [Arabidopsis
thaliana]
gb|AAC32434.2| (AC004786) putative nucleotide-binding protein [Arabidopsis
thaliana]
gb|AAM64830.1| (AY087277) putative nucleotide-binding protein [Arabidopsis
thaliana]
Length = 300
Score = 87.0 bits (214), Expect = 1e-16
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 13/164 (7%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLL-GKNLAKSSATPGKTRLA 62
IK+ F+ SS++ CP E+ +LGRSNVGKSS IN L+ K +A +S PGKT+L
Sbjct: 100 IKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLI 159
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
N F + ++ ++DLPG+G+AKVS + K +W F R S+ + L+
Sbjct: 160 NHF---------LVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDSLVCVLLLI 210
Query: 123 DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR 166
DA +ID + L R + +FTK DK+ + R
Sbjct: 211 DASVPPQKIDLDC---ANWLGRNNVPMTFVFTKCDKMKATKGKR 251
>sp|O81004|YB87_ARATH Hypothetical GTP-binding protein At2g22870
Length = 219
Score = 87.0 bits (214), Expect = 1e-16
Identities = 58/164 (35%), Positives = 86/164 (52%), Gaps = 13/164 (7%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLL-GKNLAKSSATPGKTRLA 62
IK+ F+ SS++ CP E+ +LGRSNVGKSS IN L+ K +A +S PGKT+L
Sbjct: 19 IKEVEFVKSSARARDCPKDDRPEIAILGRSNVGKSSLINCLVRKKEVALTSKKPGKTQLI 78
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
N F + ++ ++DLPG+G+AKVS + K +W F R S+ + L+
Sbjct: 79 NHF---------LVNKSWYIVDLPGYGFAKVSDAAKTDWSAFTKGYFLNRDSLVCVLLLI 129
Query: 123 DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHR 166
DA +ID + L R + +FTK DK+ + R
Sbjct: 130 DASVPPQKIDLDC---ANWLGRNNVPMTFVFTKCDKMKATKGKR 170
>ref|NP_541251.1| (NC_003318) GTP-BINDING PROTEIN CGPA [Brucella melitensis]
gb|AAL53515.1| (AE009666) GTP-BINDING PROTEIN CGPA [Brucella melitensis]
Length = 241
Score = 87.0 bits (214), Expect = 1e-16
Identities = 51/135 (37%), Positives = 76/135 (55%), Gaps = 4/135 (2%)
Query: 26 EMVVLGRSNVGKSSFINTLLGKN-LAKSSATPGKTRLANFFSTTWEDKENALRATFNVID 84
E+ GRSNVGKSS IN L+GK LA++S TPG+T+ N+F EN ++D
Sbjct: 59 EIAFAGRSNVGKSSLINALVGKKGLARTSNTPGRTQELNYFVPDGYSGENGDLPPLALVD 118
Query: 85 LPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAKENIQALLR 144
+PG+G+A+ K+ W +++ L R ++K L+DARH I KN E + L +
Sbjct: 119 MPGYGFAEAPKAQVDAWTRLVFDYLRGRTTLKRVYVLIDARH---GIKKNDAEVLDLLDK 175
Query: 145 PDQAYLSLFTKFDKL 159
+Y + TK DK+
Sbjct: 176 AAVSYQIVLTKIDKI 190
>ref|NP_418301.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
pir||S40810 hypothetical protein f199 - Escherichia coli
gb|AAA24403.1| (J01663) unidentified protein [Escherichia coli]
gb|AAB02999.1| (L19201) matches PS00017: ATP_GTP_A [Escherichia coli]
gb|AAC76862.1| (AE000462) orf, hypothetical protein [Escherichia coli K12]
Length = 199
Score = 87.0 bits (214), Expect = 1e-16
Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 13/151 (8%)
Query: 10 LTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTT 68
+ S+ + P+ E+ GRSN GKSS +NTL K+LA++S TPG+T+L N F
Sbjct: 1 MMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVA 60
Query: 69 WEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLD 128
+ ++DLPG+GYA+V + +K++W+ L E L R S++ + L+D RH
Sbjct: 61 DGKR---------LVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPL 111
Query: 129 LEIDKNAKENIQALLRPDQAYLSLFTKFDKL 159
++D ++ I+ + + A L L TK DKL
Sbjct: 112 KDLD---QQMIEWAVDSNIAVLVLLTKADKL 139
>ref|NP_326070.1| (NC_002771) GTP-BINDING PROTEIN [Mycoplasma pulmonis]
emb|CAC13412.1| (AL445563) GTP-BINDING PROTEIN [Mycoplasma pulmonis]
Length = 186
Score = 87.0 bits (214), Expect = 1e-16
Identities = 59/170 (34%), Positives = 94/170 (54%), Gaps = 26/170 (15%)
Query: 8 HFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFST 67
HF+ S+S E+ +GRSNVGKSS IN+L ++K S TPG+T+L NFF
Sbjct: 3 HFIKSASNSQSWYNHDKVEICFIGRSNVGKSSLINSLSNSAVSKVSNTPGRTQLINFFE- 61
Query: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH- 126
+D++N +DLPG+G+A++ K ++ + E L R ++K + L D+R
Sbjct: 62 --DDQKNV------YVDLPGYGFAQMPKDKLEKMHQMIDEYLQNRKNLKTIVLLFDSRRG 113
Query: 127 -LDLEID-----KNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLN 170
LD ++D + AK+NI + L TK DKLN+ ++H+L ++
Sbjct: 114 ILDQDLDFINWAQQAKKNI----------ILLATKIDKLNQAQKHKLLVS 153
>ref|NP_290489.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
gb|AAG59053.1|AE005617_2 (AE005617) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
Length = 199
Score = 87.0 bits (214), Expect = 1e-16
Identities = 54/151 (35%), Positives = 86/151 (56%), Gaps = 13/151 (8%)
Query: 10 LTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTT 68
+ S+ + P+ E+ GRSN GKSS +NTL K+LA++S TPG+T+L N F
Sbjct: 1 MMSAPDIRHLPSDTGIEVAFAGRSNAGKSSALNTLTNQKSLARTSKTPGRTQLINLFEVA 60
Query: 69 WEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLD 128
+ ++DLPG+GYA+V + +K++W+ L E L R S++ + L+D RH
Sbjct: 61 DGKR---------LVDLPGYGYAEVPEEMKRKWQRALGEYLEKRQSLQGLVVLMDIRHPL 111
Query: 129 LEIDKNAKENIQALLRPDQAYLSLFTKFDKL 159
++D ++ I+ + + A L L TK DKL
Sbjct: 112 KDLD---QQMIEWAVDSNIAVLVLLTKADKL 139
>ref|NP_229770.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
sp|Q9KVN0|ENGB_VIBCH Probable GTP-binding protein engB
pir||E82364 conserved hypothetical protein VC0111 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF93289.1| (AE004101) conserved hypothetical protein [Vibrio cholerae]
Length = 220
Score = 87.0 bits (214), Expect = 1e-16
Identities = 49/130 (37%), Positives = 74/130 (56%), Gaps = 10/130 (7%)
Query: 5 KDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLAN 63
++ HF+TS+ + P E+ GRSN GKSS +N L KNLAK+S TPG+T+L N
Sbjct: 8 QNTHFITSAPDIRHLPEDEGIEIAFAGRSNAGKSSSLNRLTNQKNLAKTSKTPGRTQLIN 67
Query: 64 FFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVD 123
F +++DLPG+G+A+V +K +W+ L E L R S+K + L+D
Sbjct: 68 LFKVA---------DGCHIVDLPGYGFAQVPLEMKLKWQRALGEYLQKRQSLKGLVVLMD 118
Query: 124 ARHLDLEIDK 133
RH ++D+
Sbjct: 119 IRHPMKDLDQ 128
>ref|NP_390697.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|P38424|ENGB_BACSU Probable GTP-binding protein engB
pir||I40422 conserved hypothetical protein ysxC - Bacillus subtilis
emb|CAA53985.1| (X76424) orfX [Bacillus subtilis]
emb|CAA99541.1| (Z75208) hypothetical protein [Bacillus subtilis]
emb|CAB14779.1| (Z99118) similar to hypothetical proteins [Bacillus subtilis]
Length = 195
Score = 86.7 bits (213), Expect = 2e-16
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 13/147 (8%)
Query: 18 QCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTTWEDKENAL 76
Q P E+ + GRSNVGKSSFIN+L+ KNLA++S+ PGKT+ NF+ E
Sbjct: 17 QYPEGGLPEIALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDE------ 70
Query: 77 RATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAK 136
+ +D+PG+G+AKVSKS ++ W + ++ R +K + +VD RH D
Sbjct: 71 ---LHFVDVPGYGFAKVSKSEREAWGRMIETYITTREELKAVVQIVDLRHAPSNDDVQMY 127
Query: 137 ENIQALLRPDQAYLSLFTKFDKLNKNE 163
E ++ P + + TK DK+ K +
Sbjct: 128 EFLKYYGIP---VIVIATKADKIPKGK 151
>ref|NP_240244.1| (NC_002528) hypothetical GTP-binding protein [Buchnera sp. APS]
sp|P57507|ENGB_BUCAI Probable GTP-binding protein engB
dbj|BAB13130.1| (AP001119) hypothetical GTP-binding protein [Buchnera sp. APS]
Length = 205
Score = 86.7 bits (213), Expect = 2e-16
Identities = 54/158 (34%), Positives = 85/158 (53%), Gaps = 13/158 (8%)
Query: 8 HFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFS 66
+FL S S++ E+ +G SN GKSS IN L K LA+ S TPG+T+L NFF
Sbjct: 10 NFLKSYSKITDIDIQNGIEIAFIGYSNTGKSSAINALTNQKKLARFSKTPGRTQLINFFE 69
Query: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126
+ F ++DLPG+GY++ ++ +W+ +++ L R IKLF+ L+D R+
Sbjct: 70 VV---------SGFRIVDLPGYGYSQAPLLVRSKWQKKVYDYLEKREQIKLFVLLMDIRY 120
Query: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
++D+ I ++ + L L TK DK+ N Q
Sbjct: 121 PLKKLDQKI---ISIAVQKKISILVLLTKCDKIKINHQ 155
>ref|NP_298719.1| (NC_002488) GTP-binding protein [Xylella fastidiosa 9a5c]
pir||E82682 GTP-binding protein XF1430 [imported] - Xylella fastidiosa (strain
9a5c)
gb|AAF84239.1|AE003973_7 (AE003973) GTP-binding protein [Xylella fastidiosa 9a5c]
Length = 229
Score = 86.3 bits (212), Expect = 2e-16
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 7 AHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKN-LAKSSATPGKTRLANFF 65
A +L S+ Q PA SE+ GRSN GKSS +NTL +N LA+ S TPG+T+ +F
Sbjct: 34 AKYLLSAHTTHQLPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYF 93
Query: 66 STTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
+ T + ++DLPG+GYAKV K L+ W+ F+ R +++ + ++D R
Sbjct: 94 TVTPQRY---------LVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIR 144
Query: 126 HLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
H E D + P QA L TK DKL + +Q
Sbjct: 145 HPLKEYDLQMLAYARQRGLPAQA---LLTKADKLGRGQQ 180
>ref|NP_372197.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_374785.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB42764.1| (AP003134) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB57835.1| (AP003363) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 196
Score = 86.3 bits (212), Expect = 2e-16
Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 13/154 (8%)
Query: 18 QCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTTWEDKENAL 76
Q P + SE+ + GRSNVGKS+FIN+++G KN+A++S PGKT+ NF++ +
Sbjct: 19 QYPETELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYN---------I 69
Query: 77 RATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAK 136
+D+PG+GYAKVSK+ ++++ + E ++ R +++L I LVD RH D D
Sbjct: 70 DEQLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRH-DPTQDDILM 128
Query: 137 ENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLN 170
N L D L + TK DK+ K + + N
Sbjct: 129 YNY--LKHFDIPTLVICTKEDKIPKGKVQKHIKN 160
>ref|NP_646434.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB95482.1| (AP004827) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 196
Score = 86.3 bits (212), Expect = 2e-16
Identities = 57/154 (37%), Positives = 89/154 (57%), Gaps = 13/154 (8%)
Query: 18 QCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTTWEDKENAL 76
Q P + SE+ + GRSNVGKS+FIN+++G KN+A++S PGKT+ NF++ +
Sbjct: 19 QYPKTELSEVALSGRSNVGKSTFINSMIGRKNMARTSQQPGKTQTLNFYN---------I 69
Query: 77 RATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAK 136
+D+PG+GYAKVSK+ ++++ + E ++ R +++L I LVD RH D D
Sbjct: 70 DEQLIFVDVPGYGYAKVSKTQREKFGKMIEEYITKRENLQLVIQLVDLRH-DPTQDDILM 128
Query: 137 ENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLN 170
N L D L + TK DK+ K + + N
Sbjct: 129 YNY--LKHFDIPTLVICTKEDKIPKGKVQKHIKN 160
>sp|Q9PDE9|ENGB_XYLFA Probable GTP-binding protein engB
Length = 203
Score = 86.3 bits (212), Expect = 2e-16
Identities = 58/159 (36%), Positives = 84/159 (52%), Gaps = 13/159 (8%)
Query: 7 AHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKN-LAKSSATPGKTRLANFF 65
A +L S+ Q PA SE+ GRSN GKSS +NTL +N LA+ S TPG+T+ +F
Sbjct: 8 AKYLLSAHTTHQLPADDGSEVAFAGRSNAGKSSVLNTLTRQNALARVSKTPGRTQQLVYF 67
Query: 66 STTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
+ T + ++DLPG+GYAKV K L+ W+ F+ R +++ + ++D R
Sbjct: 68 TVTPQRY---------LVDLPGYGYAKVPKELQIHWQTFIDSYFHQRQALRGLVVVMDIR 118
Query: 126 HLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
H E D + P QA L TK DKL + +Q
Sbjct: 119 HPLKEYDLQMLAYARQRGLPAQA---LLTKADKLGRGQQ 154
>ref|NP_403685.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]
emb|CAC88886.1| (AJ414141) conserved hypothetical protein [Yersinia pestis]
Length = 216
Score = 85.9 bits (211), Expect = 3e-16
Identities = 62/173 (35%), Positives = 90/173 (51%), Gaps = 16/173 (9%)
Query: 8 HFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFS 66
HF+ S+ + P E+ GRSN GKSS +NTL K LA++S TPG+T+L N F
Sbjct: 12 HFVISAPDIRHLPRDEGIEVAFAGRSNAGKSSALNTLTNQKGLARTSKTPGRTQLINLFE 71
Query: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126
+ +R ++DLPG+GYA+V + +K +W+ L E L R +K + L+D RH
Sbjct: 72 VV-----DGVR----LVDLPGYGYAEVPEEMKLKWQRALGEYLQKRNCLKGLVVLMDIRH 122
Query: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKL---NKNEQHRLFLNAPKPFL 176
++D+ A+ P L L TK DKL + Q L A PF+
Sbjct: 123 PLKDLDQQMITWAVAVGTP---VLLLLTKADKLASGARKAQLNLVREAIIPFM 172
>ref|NP_229266.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
sp|Q9X1H7|ENGB_THEMA Probable GTP-binding protein engB
pir||C72252 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD36534.1|AE001797_14 (AE001797) conserved hypothetical protein [Thermotoga maritima]
Length = 195
Score = 85.9 bits (211), Expect = 3e-16
Identities = 53/163 (32%), Positives = 85/163 (51%), Gaps = 12/163 (7%)
Query: 2 IVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRL 61
++I+D + + P L E+ +GRSNVGKSS +N L + +A S TPGKTR
Sbjct: 1 MIIRDVELVKVARTPGDYPPPLKGEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRS 60
Query: 62 ANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHL 121
NF+ + + + +DLPG+GYAKVSK + W+ + + R S+++ L
Sbjct: 61 INFY---------LVNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLL 111
Query: 122 VDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
VD R + D E +++L P + + TK DK+ +E+
Sbjct: 112 VDGRIPPQDSDLMMVEWMKSLNIP---FTIVLTKMDKVKMSER 151
>sp|Q9RNL6|ENGB_ZYMMO Probable GTP-binding protein engB
gb|AAD56911.1|AF180145_3 (AF180145) GTP-binding protein CgpA [Zymomonas mobilis]
Length = 212
Score = 85.1 bits (209), Expect = 5e-16
Identities = 55/157 (35%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 8 HFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKN-LAKSSATPGKTRLANFFS 66
+FL S+ L PA E+ GRSNVGKSS IN L +N LA++S TPG+T+ NFF
Sbjct: 21 NFLKSAPALEFLPAPTAPEVAFAGRSNVGKSSLINALTNRNSLARASTTPGRTQELNFF- 79
Query: 67 TTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARH 126
D L+ ++D+PG+G+AK K + K W+ + + L R ++ + L+D+RH
Sbjct: 80 ----DVGEPLQ--MRLVDMPGYGFAKAPKDVVKRWKWLINDYLRGRAVLRRSLILIDSRH 133
Query: 127 LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNE 163
++D++ ++ L +Y + TK DK+ E
Sbjct: 134 GIKDVDRDL---MKMLDDAAISYRVVLTKSDKIKAVE 167
>sp|Q9JY03|ENGB_NEIMB Probable GTP-binding protein engB
Length = 209
Score = 84.3 bits (207), Expect = 8e-16
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGK-NLAKSSATPGKT 59
M + ++A F T+ + L P + E+ +GRSN GKSS INTL LA S TPG+T
Sbjct: 1 MNLFQNAKFFTTINHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRT 59
Query: 60 RLANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFI 119
+ NFF L+ ++DLPG+GYA+V ++++ W L + L R + +
Sbjct: 60 QHINFFE---------LQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLV 110
Query: 120 HLVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
++DARH E+D + RP LS K DKL+KNEQ
Sbjct: 111 LIMDARHPLKELDIRMLDFFHTTGRPVHILLS---KADKLSKNEQ 152
>ref|NP_283463.1| (NC_003116) putative GTP-binding protein [Neisseria meningitidis
Z2491]
sp|Q9JVW1|ENGB_NEIMA Probable GTP-binding protein engB
pir||G81985 probable GTP-binding protein NMA0656 [imported] - Neisseria
meningitidis (group A strain Z2491)
emb|CAB83944.1| (AL162753) putative GTP-binding protein [Neisseria meningitidis
Z2491]
Length = 209
Score = 84.3 bits (207), Expect = 8e-16
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGK-NLAKSSATPGKT 59
M + ++A F T+ + L P + E+ +GRSN GKSS INTL LA S TPG+T
Sbjct: 1 MNLFQNAKFFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRT 59
Query: 60 RLANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFI 119
+ NFF L+ ++DLPG+GYA+V ++++ W L + L R + +
Sbjct: 60 QHINFFE---------LQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLV 110
Query: 120 HLVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
++DARH E+D + RP LS K DKL+KNEQ
Sbjct: 111 LIMDARHPLKELDIRMLDFFHTTGRPVHILLS---KADKLSKNEQ 152
>ref|NP_274803.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||G81040 conserved hypothetical protein NMB1806 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF42143.1| (AE002530) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 211
Score = 84.3 bits (207), Expect = 8e-16
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGK-NLAKSSATPGKT 59
M + ++A F T+ + L P + E+ +GRSN GKSS INTL LA S TPG+T
Sbjct: 3 MNLFQNAKFFTTINHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRT 61
Query: 60 RLANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFI 119
+ NFF L+ ++DLPG+GYA+V ++++ W L + L R + +
Sbjct: 62 QHINFFE---------LQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLQQRKQLIGLV 112
Query: 120 HLVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
++DARH E+D + RP LS K DKL+KNEQ
Sbjct: 113 LIMDARHPLKELDIRMLDFFHTTGRPVHILLS---KADKLSKNEQ 154
>gb|AAB52537.1| (U72876) hypothetical GTPase [Neisseria gonorrhoeae]
Length = 211
Score = 83.6 bits (205), Expect = 1e-15
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGK-NLAKSSATPGKT 59
M + ++A F T+ + L P + E+ +GRSN GKSS INTL LA S TPG+T
Sbjct: 3 MNLFQNAKFFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRT 61
Query: 60 RLANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFI 119
+ NFF L+ ++DLPG+GYA+V ++++ W L + L R + +
Sbjct: 62 QHINFFE---------LQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKELIGLV 112
Query: 120 HLVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
++DARH E+D + RP LS K DKL+KNEQ
Sbjct: 113 LIMDARHPLKELDIRMLDFFHTTGRPVHILLS---KADKLSKNEQ 154
>ref|NP_384549.1| (NC_003047) HYPOTHETICAL GTP-BINDING PROTEIN [Sinorhizobium
meliloti]
emb|CAC41880.1| (AL591783) HYPOTHETICAL GTP-BINDING PROTEIN [Sinorhizobium
meliloti]
Length = 217
Score = 83.6 bits (205), Expect = 1e-15
Identities = 51/141 (36%), Positives = 77/141 (54%), Gaps = 4/141 (2%)
Query: 20 PASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTTWEDKENALRA 78
P +E+ GRSNVGKSS IN L+G K LA++S TPG+T+ N+F E
Sbjct: 30 PPEGPTEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPDGYSGEAGDLP 89
Query: 79 TFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAKEN 138
++D+PG+GYA+ K W +++ L R ++K L+DARH I KN ++
Sbjct: 90 PMALVDMPGYGYAQAPKEQVDAWTKLVFDYLRGRSTLKRVYVLIDARH---GIKKNDEDV 146
Query: 139 IQALLRPDQAYLSLFTKFDKL 159
+ L + +Y + TK DK+
Sbjct: 147 LALLDKAAVSYQIVLTKTDKI 167
>sp|O05132|ENGB_NEIGO Probable GTP-binding protein engB
Length = 209
Score = 83.6 bits (205), Expect = 1e-15
Identities = 60/165 (36%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGK-NLAKSSATPGKT 59
M + ++A F T+ + L P + E+ +GRSN GKSS INTL LA S TPG+T
Sbjct: 1 MNLFQNAKFFTTVNHLKDLPDT-PLEIAFVGRSNAGKSSAINTLTNHVRLAYVSKTPGRT 59
Query: 60 RLANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFI 119
+ NFF L+ ++DLPG+GYA+V ++++ W L + L R + +
Sbjct: 60 QHINFFE---------LQNGNFMVDLPGYGYAQVPEAVRAHWVNLLGDYLRHRKELIGLV 110
Query: 120 HLVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
++DARH E+D + RP LS K DKL+KNEQ
Sbjct: 111 LIMDARHPLKELDIRMLDFFHTTGRPVHILLS---KADKLSKNEQ 152
>ref|NP_353414.1| (NC_003062) AGR_C_672p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_531089.1| (NC_003304) GTP-binding protein [Agrobacterium tumefaciens str. C58
(U. Washington)]
gb|AAK86199.1| (AE007975) AGR_C_672p [Agrobacterium tumefaciens str. C58 (Cereon)]
gb|AAL41405.1| (AE009009) GTP-binding protein [Agrobacterium tumefaciens str. C58
(U. Washington)]
Length = 217
Score = 83.6 bits (205), Expect = 1e-15
Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 4/135 (2%)
Query: 26 EMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVID 84
E+ GRSNVGKSS IN L+G K LA++S TPG+T+ N+F E ++D
Sbjct: 36 EIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGYSGEPGDLPPMALVD 95
Query: 85 LPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAKENIQALLR 144
+PG+GYA+ K W +++ L R ++K L+D+RH I KN +E + L +
Sbjct: 96 MPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRH---GIKKNDEEVLSLLDK 152
Query: 145 PDQAYLSLFTKFDKL 159
+Y + TK DK+
Sbjct: 153 AAVSYQVVLTKTDKI 167
>ref|NP_359775.1| (NC_003103) hypothetical GTP-binding protein [Rickettsia conorii]
gb|AAL02676.1| (AE008580) hypothetical GTP-binding protein [Rickettsia conorii]
Length = 236
Score = 83.2 bits (204), Expect = 2e-15
Identities = 55/158 (34%), Positives = 85/158 (52%), Gaps = 13/158 (8%)
Query: 7 AHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFF 65
A F+ + + Q E+ +G+SNVGKSS INT+ KNLAK S TPG+TR NFF
Sbjct: 46 AKFVAGAMNINQILNFSLPEIAFVGKSNVGKSSLINTICNNKNLAKVSNTPGRTRQINFF 105
Query: 66 STTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
+ L ++DLPG+G+A V S+K++W + L +++L L+D+R
Sbjct: 106 N---------LADKLIIVDLPGYGFANVPISVKEQWGVLISYYLRNSYNLRLVNLLIDSR 156
Query: 126 HLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNE 163
I +N K+ LL + + +FTK DK+ ++
Sbjct: 157 R---GIKENDKKVADLLLANKREFQIIFTKSDKVTDHK 191
>ref|NP_105600.1| (NC_002678) GTP-binding protein [Mesorhizobium loti]
dbj|BAB51386.1| (AP003005) GTP-binding protein [Mesorhizobium loti]
Length = 212
Score = 82.8 bits (203), Expect = 2e-15
Identities = 51/135 (37%), Positives = 73/135 (53%), Gaps = 4/135 (2%)
Query: 26 EMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVID 84
E+ GRSNVGKSS IN L+ K LA++S TPG+T+ N+F E A ++D
Sbjct: 30 EIAFAGRSNVGKSSLINALVNQKGLARTSNTPGRTQELNYFVPDGFSGEGADLPPMALVD 89
Query: 85 LPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAKENIQALLR 144
+PG+GYA K EW +++ L RV++K L+DARH I E + L +
Sbjct: 90 MPGYGYATAPKEKVDEWTKLVFDYLKGRVTLKRVYVLIDARH---GIKAKDDEVLSLLDK 146
Query: 145 PDQAYLSLFTKFDKL 159
+Y + TK DK+
Sbjct: 147 AAVSYQIVLTKTDKI 161
>gb|AAC69623.1| (AF084242) GTP-binding protein; CgpA [Caulobacter crescentus]
Length = 199
Score = 82.0 bits (201), Expect = 4e-15
Identities = 59/183 (32%), Positives = 90/183 (48%), Gaps = 13/183 (7%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKT 59
M + F+ + ++ P S E+ GRSNVGKSS IN L+ K LA++S PG+T
Sbjct: 1 MFFAQPVSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRT 60
Query: 60 RLANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFI 119
R NFF L ++DLPG+G+A+VS+S+ +++ L R ++K
Sbjct: 61 RQINFF---------LLAEKVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVY 111
Query: 120 HLVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINT 179
L+DARH ++D A + AL +Y + TK DK+ E ++ K
Sbjct: 112 VLIDARHGLKKVDLEA---LDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRA 168
Query: 180 AHF 182
A F
Sbjct: 169 AAF 171
>ref|NP_465083.1| (NC_003210) similar to hypothetical GTP binding protein [Listeria
monocytogenes EGD-e]
emb|CAC99636.1| (AL591979) similar to hypothetical GTP binding protein [Listeria
monocytogenes]
Length = 194
Score = 81.6 bits (200), Expect = 5e-15
Identities = 53/161 (32%), Positives = 90/161 (54%), Gaps = 13/161 (8%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLA 62
+ + + S+ + Q P + E + GRSNVGKSSFINT++ K++A+ S PGKT+
Sbjct: 3 VNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
NF+ E AL +D+PG+G+AKVSK+ +++W + ++ R ++ I +V
Sbjct: 63 NFYKI-----EEALF----FVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIV 113
Query: 123 DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNE 163
D RH E D+ E ++ D + + TK DK+ +++
Sbjct: 114 DLRHKPTEDDRMMYEFLKYY---DIPVIVIATKADKIPRSK 151
>ref|NP_419583.1| (NC_002696) GTP-binding protein CgpA [Caulobacter crescentus CB15]
sp|Q9ZG89|ENGB_CAUCR GTP-binding protein engB (GTP-binding protein cgpA)
gb|AAK22751.1| (AE005752) GTP-binding protein CgpA [Caulobacter crescentus CB15]
Length = 199
Score = 81.6 bits (200), Expect = 5e-15
Identities = 59/183 (32%), Positives = 90/183 (48%), Gaps = 13/183 (7%)
Query: 1 MIVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKT 59
M + F+ + ++ P S E+ GRSNVGKSS IN L+ K LA++S PG+T
Sbjct: 1 MFFAQPVSFIMGAVRMDAMPPSDLPEVAFAGRSNVGKSSLINGLVNQKYLARASNEPGRT 60
Query: 60 RLANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFI 119
R NFF L ++DLPG+G+A+VS+S+ +++ L R ++K
Sbjct: 61 REINFF---------LLAEKVRLVDLPGYGFARVSRSIADKFQDLGRAYLRGRANLKRVY 111
Query: 120 HLVDARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINT 179
L+DARH ++D A + AL +Y + TK DK+ E ++ K
Sbjct: 112 VLIDARHGLKKVDLEA---LDALDVAAVSYQIVLTKADKIKPAEVDKVVAETQKAIAKRA 168
Query: 180 AHF 182
A F
Sbjct: 169 AAF 171
>ref|NP_470929.1| (NC_003212) similar to hypothetical GTP binding protein [Listeria
innocua]
emb|CAC96824.1| (AL596169) similar to hypothetical GTP binding protein [Listeria
innocua]
Length = 194
Score = 80.9 bits (198), Expect = 8e-15
Identities = 53/161 (32%), Positives = 90/161 (54%), Gaps = 13/161 (8%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLA 62
+ + + S+ + Q P + E + GRSNVGKSSFINT++ K++A+ S PGKT+
Sbjct: 3 VNNVELVISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMIRRKSMARISQKPGKTQTL 62
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
NF+ E AL +D+PG+G+AKVSK+ +++W + ++ R ++ I +V
Sbjct: 63 NFYKI-----EEALF----FVDVPGYGFAKVSKTEREKWGVMIETYITSREQLRGVIQIV 113
Query: 123 DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNE 163
D RH E D+ E ++ D + + TK DK+ +++
Sbjct: 114 DLRHKPTEDDRMMYEFLKYY---DIPVIVVATKADKIPRSK 151
>ref|NP_660751.1| (NC_004061) hypothetical GTP-binding protein in polA-hemN [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM67962.1| (AE014117) hypothetical GTP-binding protein in polA-hemN [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 201
Score = 80.5 bits (197), Expect = 1e-14
Identities = 60/182 (32%), Positives = 84/182 (45%), Gaps = 15/182 (8%)
Query: 9 FLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFST 67
FL S S + E+ +G SN GKSS IN L K LA+ S TPG+T+L N F
Sbjct: 11 FLKSISNISDIQIEHGIEIAFIGYSNSGKSSAINALTNQKKLARFSKTPGRTQLINLFQV 70
Query: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127
T + F ++DLPG+GYAK +K +W+ ++ L S+K + L+D R+
Sbjct: 71 T---------SDFRIVDLPGYGYAKAPLLIKIKWQNMIYSYLKNSRSLKGLVLLMDIRYP 121
Query: 128 DLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPF--LINTAHFNAL 185
+D++ I L L L TK DK N Q F + +N H
Sbjct: 122 LKILDQDI---ISMALNCKIPILLLLTKCDKFTINNQKIQFQKVYEKLDKFLNELHIQLF 178
Query: 186 SS 187
SS
Sbjct: 179 SS 180
>ref|NP_243915.1| (NC_002570) GTP-binding protein [Bacillus halodurans]
sp|Q9K8F7|ENGB_BACHD Probable GTP-binding protein engB
dbj|BAB06768.1| (AP001517) GTP-binding protein [Bacillus halodurans]
Length = 194
Score = 79.7 bits (195), Expect = 2e-14
Identities = 49/147 (33%), Positives = 80/147 (54%), Gaps = 13/147 (8%)
Query: 18 QCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLANFFSTTWEDKENAL 76
Q P S E+ + GRSNVGKSSFIN ++ K LA++S PGKT+ NF++ +
Sbjct: 17 QYPNSPLPEVALAGRSNVGKSSFINKMINRKKLARTSQRPGKTQTLNFYN---------I 67
Query: 77 RATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAK 136
+ +D+PG+G+AKVSK ++ W + L R +K + ++D RH + D+
Sbjct: 68 NDILHFVDVPGYGFAKVSKKDREAWGRMIETYLQQRGQLKAVLQIIDIRHDPTKDDQLMY 127
Query: 137 ENIQALLRPDQAYLSLFTKFDKLNKNE 163
+ ++ P + + TK DK+ K +
Sbjct: 128 DWLKHFEIP---VIIIATKCDKIPKGK 151
>ref|NP_196709.1| (NM_121186) putative GTP-binding protein [Arabidopsis thaliana]
pir||T48507 probable GTP-binding protein - Arabidopsis thaliana
emb|CAB87708.1| (AL163815) putative GTP-binding protein [Arabidopsis thaliana]
gb|AAL25554.1| (AY058138) AT5g11480/F15N18_70 [Arabidopsis thaliana]
Length = 318
Score = 76.6 bits (187), Expect = 2e-13
Identities = 56/166 (33%), Positives = 84/166 (49%), Gaps = 23/166 (13%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLL-GKNLAKSSATPGKTRLA 62
+ A ++ SS + CPA E ++GRSNVGKSS +N+L+ K LA +S PGKT+
Sbjct: 115 VVQADYVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCI 174
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
N F + + ++DLPG+GYA LK++W F + R ++ LV
Sbjct: 175 NHF---------RINDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLV 225
Query: 123 DA----RHLDLEIDKNAKENIQALLRPDQAYLSL-FTKFDKLNKNE 163
DA + +DLE + L +Q ++L FTK DK K +
Sbjct: 226 DASIPVKPIDLE--------YASWLGQNQVPMTLIFTKCDKRKKKK 263
>gb|AAM64748.1| (AY087192) putative GTP-binding protein [Arabidopsis thaliana]
Length = 318
Score = 76.6 bits (187), Expect = 2e-13
Identities = 56/166 (33%), Positives = 84/166 (49%), Gaps = 23/166 (13%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLL-GKNLAKSSATPGKTRLA 62
+ A ++ SS + CPA E ++GRSNVGKSS +N+L+ K LA +S PGKT+
Sbjct: 115 VVQADYVKSSVKTEDCPADGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCI 174
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
N F + + ++DLPG+GYA LK++W F + R ++ LV
Sbjct: 175 NHF---------RINDKWYLVDLPGYGYASAPHELKQDWNKFTKDYFLNRSTLVSVFLLV 225
Query: 123 DA----RHLDLEIDKNAKENIQALLRPDQAYLSL-FTKFDKLNKNE 163
DA + +DLE + L +Q ++L FTK DK K +
Sbjct: 226 DASIPVKPIDLE--------YASWLGQNQVPMTLIFTKCDKRKKKK 263
>ref|NP_658500.1| (NC_003995) MMR_HSR1, GTPase of unknown function [Bacillus
anthracis A2012] [Bacillus anthracis str. A2012]
Length = 198
Score = 75.9 bits (185), Expect = 3e-13
Identities = 52/161 (32%), Positives = 79/161 (48%), Gaps = 13/161 (8%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG-KNLAKSSATPGKTRLA 62
+ A + S+ + Q P E+ + GRSNVGKSSFIN +L K L + S+ PGKT+
Sbjct: 3 VTKADIVISAVKPEQYPDGDLPEIALAGRSNVGKSSFINKILNRKKLVRISSKPGKTQTL 62
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLV 122
NFF + + +D+PG+GYAKVSK+ + W + + R + + +V
Sbjct: 63 NFF---------LINEMMHFVDVPGYGYAKVSKTERAAWGKMIETYFTTREQLDAAVLVV 113
Query: 123 DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNE 163
D RH D + L D + + TK DK+ K +
Sbjct: 114 DLRHKPTNDDVMMYD---FLKHYDIPTIIIATKADKIPKGK 151
>ref|NP_641078.1| (NC_003919) GTP-binding protein [Xanthomonas axonopodis pv. citri
str. 306]
gb|AAM35614.1| (AE011702) GTP-binding protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 214
Score = 75.5 bits (184), Expect = 4e-13
Identities = 55/168 (32%), Positives = 86/168 (50%), Gaps = 21/168 (12%)
Query: 2 IVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKN-LAKSSATPGKTR 60
++I+ A + S+ Q P E+ GRSN GKSS +N L +N LA+ S TPG+T+
Sbjct: 3 LLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQ 62
Query: 61 LANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH 120
FF ++ ++DLPG+GYAKV + L+ W+ F+ R +++ +
Sbjct: 63 QLVFFQ---------IQPERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVV 113
Query: 121 LVDARH----LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
++D RH DL++ A E R A+ L TK DKL + +Q
Sbjct: 114 VMDIRHPLKDYDLQMLGYAAE------RGLPAH-GLLTKADKLGRGQQ 154
>ref|NP_638743.1| (NC_003902) GTP-binding protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gb|AAM42667.1| (AE012458) GTP-binding protein [Xanthomonas campestris pv.
campestris str. ATCC 33913]
Length = 207
Score = 75.5 bits (184), Expect = 4e-13
Identities = 55/168 (32%), Positives = 86/168 (50%), Gaps = 21/168 (12%)
Query: 2 IVIKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKN-LAKSSATPGKTR 60
++I+ A + S+ Q P E+ GRSN GKSS +N L +N LA+ S TPG+T+
Sbjct: 3 LLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNSLARVSKTPGRTQ 62
Query: 61 LANFFSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIH 120
FF ++ ++DLPG+GYAKV + L+ W+ F+ R +++ +
Sbjct: 63 QLVFFQ---------IQPERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVV 113
Query: 121 LVDARH----LDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQ 164
++D RH DL++ A E R A+ L TK DKL + +Q
Sbjct: 114 VMDIRHPLKDYDLQMLGYAAE------RGLPAH-GLLTKADKLGRGQQ 154
>gb|AAM33711.1| (AC117076) PUTATIVE GTP-BINDING PROTEIN CGPA [Dictyostelium
discoideum]
Length = 683
Score = 74.7 bits (182), Expect = 6e-13
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 9/109 (8%)
Query: 26 EMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDL 85
E+ +GRSNVGKSS IN L + LAK+S PG+T+ N+F L +T ++DL
Sbjct: 277 EVAFIGRSNVGKSSLINALTQRGLAKTSDKPGQTQSINWFE---------LGSTLYLVDL 327
Query: 86 PGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKN 134
PG+G+A ++L ++W L+ R I L+D+RH + D+N
Sbjct: 328 PGYGFAFAKETLVEQWSDITIHYLTERKCISCVFILIDSRHGLKDSDRN 376
>ref|NP_214245.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O67679|ENGB_AQUAE Probable GTP-binding protein engB
pir||E70456 conserved hypothetical protein aq_1815 - Aquifex aeolicus
gb|AAC07648.1| (AE000757) hypothetical protein [Aquifex aeolicus]
Length = 183
Score = 73.6 bits (179), Expect = 1e-12
Identities = 47/139 (33%), Positives = 74/139 (52%), Gaps = 13/139 (9%)
Query: 26 EMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDL 85
E+V +GRSNVGKSS +N ++G +AK S TPG+TR N+F L ++D+
Sbjct: 20 EVVFVGRSNVGKSSLLNMVVGSKVAKVSKTPGRTRAVNYF---------LLDKKLYLVDV 70
Query: 86 PGFGYAKVSKSLKKEWEGFLWELLSVRV-SIKLFIHLVDARHLDLEIDKNAKENIQALLR 144
PG+GYAKV + ++W + R +IK+ L+DA +D+ E +
Sbjct: 71 PGYGYAKVGREEMEKWRKMMERYFKERKDNIKMAFLLIDAVAGVQPLDEQMIEWFEYYGI 130
Query: 145 PDQAYLSLFTKFDKLNKNE 163
P + + TK DK +++E
Sbjct: 131 P---FTVVITKIDKASQSE 146
>ref|NP_568876.1| (NM_125222) contains similarity to GTP-binding protein CGPA
[Arabidopsis thaliana]
gb|AAK59667.1| (AY035163) putative GTP-binding protein CGPA [Arabidopsis thaliana]
gb|AAL34207.1| (AY063033) putative GTP-binding protein CGPA [Arabidopsis thaliana]
Length = 446
Score = 66.6 bits (161), Expect = 2e-10
Identities = 46/150 (30%), Positives = 71/150 (46%), Gaps = 13/150 (8%)
Query: 9 FLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGK-NLAKSSATPGKTRLANFFST 67
F +++ P E+ GRSNVGKSS +N L + + ++S PG T+ NFF
Sbjct: 273 FFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFG- 331
Query: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127
L ++DLPG+G+A +K+ WE + E +S R S+K LVD +
Sbjct: 332 --------LGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTK-- 381
Query: 128 DLEIDKNAKENIQALLRPDQAYLSLFTKFD 157
+ +E I + R + Y + TK D
Sbjct: 382 -WGMKPRDQELINLMERSNTKYQIVLTKTD 410
>dbj|BAA96928.2| (AB019228) contains similarity to GTP-binding protein
CGPA~gene_id:MCK7.24 [Arabidopsis thaliana]
Length = 397
Score = 64.7 bits (156), Expect = 6e-10
Identities = 39/118 (33%), Positives = 59/118 (49%), Gaps = 10/118 (8%)
Query: 9 FLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGK-NLAKSSATPGKTRLANFFST 67
F +++ P E+ GRSNVGKSS +N L + + ++S PG T+ NFF
Sbjct: 273 FFAAANVSSSFPPPDVPEIAFAGRSNVGKSSLLNALTRQWGVVRTSDKPGLTQTINFFG- 331
Query: 68 TWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
L ++DLPG+G+A +K+ WE + E +S R S+K LVD +
Sbjct: 332 --------LGPKVRLVDLPGYGFAFAKDEVKEAWEDLVKEYVSTRTSLKRVCLLVDTK 381
>gb|AAM19136.1|AC103891_16 (AC103891) Putative nucleotide binding protein [Oryza sativa
(japonica cultivar-group)]
Length = 255
Score = 64.7 bits (156), Expect = 6e-10
Identities = 57/194 (29%), Positives = 83/194 (42%), Gaps = 43/194 (22%)
Query: 4 IKDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLL-GKNLAKSSATPGKTRLA 62
+K+A F+ SS++ CP E VLGRSNVGKSS IN L+ K A +S PGKT+
Sbjct: 19 VKEAEFVKSSARARDCPKDDRPEFAVLGRSNVGKSSLINALIRRKEAALTSKKPGKTQTI 78
Query: 63 NFFSTTWEDKENALRATFNVIDLPGFG------------------------------YAK 92
N F + ++ ++DLPG+G +A
Sbjct: 79 NHF---------LVNKSWYLVDLPGYGMYHNDKIIDGIANGEKQSEKYNFALVFIGLFAA 129
Query: 93 VSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAKENIQALLRPDQAYLSL 152
S+S + +W F R ++ + LVDA +ID + L R + +
Sbjct: 130 ASQSARTDWSSFTKGYFLNRDTLVGVLLLVDASIPPQKIDIDC---ANWLGRNNIGLTYV 186
Query: 153 FTKFDKLNKNEQHR 166
FTK DK K + R
Sbjct: 187 FTKCDKSKKGKGGR 200
>ref|XP_148358.1| (XM_148358) hypothetical protein XP_148358 [Mus musculus]
ref|NP_079608.1| (NM_025332) RIKEN cDNA 0610037H22 [Mus musculus]
dbj|BAB27301.1| (AK010979) data source:SPTR, source key:Q9P025,
evidence:ISS~homolog to HSPC135~putative [Mus musculus]
Length = 285
Score = 55.5 bits (132), Expect = 4e-07
Identities = 54/199 (27%), Positives = 88/199 (44%), Gaps = 24/199 (12%)
Query: 9 FLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTL--LGKNL-AKSSATPGKTRLANFF 65
+L+S+ +L P+ E+ +GRSNVGKSS I L L ++ + S PG T+ NFF
Sbjct: 96 YLSSAVRLDHAPSLQQPEVCFIGRSNVGKSSLIKALFSLAPDVEVRISKKPGHTKKMNFF 155
Query: 66 STTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
+ F ++D+PG+GY +++ + L R ++K LVD+
Sbjct: 156 K---------VGKHFTLVDMPGYGY-----RAPEDFVDMVETYLKERNNLKRTFLLVDSV 201
Query: 126 HLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFLINTAHFNAL 185
++D A E + P Y+ + TK DK +K + L K +NT
Sbjct: 202 VGITKLDNIAIEMCEEFALP---YVMILTKIDKSSKGYLLKQVLQIQK--FVNTQTQGCF 256
Query: 186 SSKYPTLEIVRQTLLKHLL 204
+P + + HLL
Sbjct: 257 PQLFPISAVTNSGV--HLL 273
>dbj|BAB89927.1| (AP003309) putative GTP-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 307
Score = 54.3 bits (129), Expect = 9e-07
Identities = 55/185 (29%), Positives = 82/185 (43%), Gaps = 30/185 (16%)
Query: 7 AHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLL-GKNLAKSSATPGKTRLANFF 65
A F+ SS + CP E ++GRSNVGKSS +N+L+ K LA +S PGKT+ N F
Sbjct: 116 ADFVKSSVRPDDCPRDGLPEFALVGRSNVGKSSLLNSLVRRKRLALTSKKPGKTQCINHF 175
Query: 66 STTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
++ FN YA + + W+ F R ++ LVDA
Sbjct: 176 -----------KSLFN-------RYAAAPQEARTNWDEFTRNYFLGRENLVSVFLLVDAS 217
Query: 126 HLDLEIDKNAKENIQALLRPDQAYLSL-FTKFDKLNKNEQHRLFLNAPKPFLINTAHFNA 184
+ID + + L ++ ++L FTK DK K + N K N +F +
Sbjct: 218 IPAKKIDL----DYASWLGQNKVPMTLVFTKCDKRKKKK------NGGKRPEENVENFQS 267
Query: 185 LSSKY 189
L +Y
Sbjct: 268 LIREY 272
>ref|XP_039952.2| (XM_039952) HSPC135 protein [Homo sapiens]
Length = 284
Score = 49.3 bits (116), Expect = 3e-05
Identities = 45/168 (26%), Positives = 74/168 (43%), Gaps = 20/168 (11%)
Query: 9 FLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLG---KNLAKSSATPGKTRLANFF 65
+++S+ ++ P E+ +GRSNVGKSS I L + + S PG T+ NFF
Sbjct: 95 YVSSAVRIDHAPDLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFF 154
Query: 66 STTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR 125
+ F V+D+PG+G+ +++ + L R ++K LVD+
Sbjct: 155 K---------VGKHFTVVDMPGYGF-----RAPEDFVDMVETYLKERRNLKRTFLLVDSV 200
Query: 126 HLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPK 173
+ D A E + P Y+ + TK DK +K + L K
Sbjct: 201 VGIQKTDNIAIEMCEEFALP---YVIVLTKIDKSSKGHLLKQVLQIQK 245
>ref|NP_281151.1| (NC_002607) Vng2587c [Halobacterium sp. NRC-1]
sp|Q9HME0|ENGB_HALN1 Probable GTP-binding protein engB
gb|AAG20631.1| (AE005133) Vng2587c [Halobacterium sp. NRC-1]
Length = 206
Score = 47.0 bits (110), Expect = 1e-04
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 9/75 (12%)
Query: 16 LFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENA 75
+F+ + E+V++GRSNVGKS+ + + G + + PG TR N F ED
Sbjct: 1 MFKDRPDRSDEVVLVGRSNVGKSTLMRAVTGHQV-PTGQKPGVTRQPNHFDWASED---- 55
Query: 76 LRATFNVIDLPGFGY 90
F + DLPGFGY
Sbjct: 56 ----FMLTDLPGFGY 66
>gb|AAF23374.1| (AF189713) MLL septin-like fusion protein MSF-A [Homo sapiens]
Length = 586
Score = 45.1 bits (105), Expect = 5e-04
Identities = 27/97 (27%), Positives = 49/97 (49%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGK----TRLANFFSTTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + S T + +E +R V
Sbjct: 301 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 360
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 361 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 397
>ref|NP_006631.1| (NM_006640) MLL septin-like fusion; MLL septin-like fusion (NOTE:
non-standard symbol and name); septin D1 [Homo sapiens]
gb|AAD39749.1|AF123052_1 (AF123052) MLL septin-like fusion protein [Homo sapiens]
gb|AAG27919.1|AF142408_1 (AF142408) cell division control protein septin D1 [Homo sapiens]
emb|CAC42223.1| (AJ312321) OVARIAN/Breast septin alpha [Homo sapiens]
gb|AAH21192.1|AAH21192 (BC021192) MLL septin-like fusion [Homo sapiens]
Length = 568
Score = 45.1 bits (105), Expect = 5e-04
Identities = 27/97 (27%), Positives = 49/97 (49%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGK----TRLANFFSTTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + S T + +E +R V
Sbjct: 283 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 342
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 343 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 379
>emb|CAC42222.1| (AJ312320) OVARIAN/Breast septin delta [Homo sapiens]
Length = 335
Score = 45.1 bits (105), Expect = 5e-04
Identities = 27/97 (27%), Positives = 49/97 (49%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGK----TRLANFFSTTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + S T + +E +R V
Sbjct: 50 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 109
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 110 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 146
>dbj|BAB14057.1| (AK022493) unnamed protein product [Homo sapiens]
Length = 196
Score = 45.1 bits (105), Expect = 5e-04
Identities = 27/97 (27%), Positives = 49/97 (49%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGK----TRLANFFSTTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + S T + +E +R V
Sbjct: 50 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 109
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 110 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 146
>ref|NP_059076.1| (NM_017380) MLL septin-like fusion; SL3-3 integration site 1 [Mus
musculus]
ref|XP_109283.1| (XM_109283) MLL septin-like fusion [Mus musculus]
ref|XP_126472.1| (XM_126472) MLL septin-like fusion [Mus musculus]
emb|CAB59833.1| (AJ250723) septin-like protein Sint1 [Mus musculus]
gb|AAL50685.1| (AF450142) septin 9 [Mus musculus]
Length = 334
Score = 45.1 bits (105), Expect = 5e-04
Identities = 27/97 (27%), Positives = 49/97 (49%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGK----TRLANFFSTTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + S T + +E +R V
Sbjct: 50 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 109
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 110 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 146
>emb|CAC42221.1| (AJ312319) OVARIAN/Breast septin gamma [Homo sapiens]
Length = 579
Score = 45.1 bits (105), Expect = 5e-04
Identities = 27/97 (27%), Positives = 49/97 (49%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGK----TRLANFFSTTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + S T + +E +R V
Sbjct: 294 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 353
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 354 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 390
>ref|NP_010623.1| (NC_001136) Hypothetical ORF; Ydr336wp [Saccharomyces cerevisiae]
pir||S70101 hypothetical protein YDR336w - yeast (Saccharomyces cerevisiae)
gb|AAB64772.1| (U51032) Ydr336wp [Saccharomyces cerevisiae]
Length = 314
Score = 45.1 bits (105), Expect = 5e-04
Identities = 44/142 (30%), Positives = 69/142 (47%), Gaps = 26/142 (18%)
Query: 26 EMVVLGRSNVGKSSFINTL--------LGKNLAKSSATPGKTRLANFFSTTWEDKENALR 77
E++ LG +NVGKSS +N + LG +LA+ S T G T+ N ++ N LR
Sbjct: 135 EVIFLGGTNVGKSSILNNITTSHVSRDLG-SLARVSKTTGFTKTLNCYNV-----GNRLR 188
Query: 78 ATFNVIDLPGFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAKE 137
+ID PG+G+ S K++ + L LL + ++ F+ L D EI+
Sbjct: 189 ----MIDSPGYGF----NSSKEQGKVTLQYLLERKQLVRCFLLLAG----DKEINNTDNM 236
Query: 138 NIQALLRPDQAYLSLFTKFDKL 159
IQ + + +FTK DK+
Sbjct: 237 IIQYIHEHGVPFEVVFTKMDKV 258
>dbj|BAA76835.1| (AB023208) KIAA0991 protein [Homo sapiens]
gb|AAF23373.1| (AF189712) MLL septin-like fusion protein MSF-B [Homo sapiens]
emb|CAC42224.1| (AJ312322) OVARIAN/Breast septin beta [Homo sapiens]
Length = 422
Score = 45.1 bits (105), Expect = 5e-04
Identities = 27/97 (27%), Positives = 49/97 (49%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGK----TRLANFFSTTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + S T + +E +R V
Sbjct: 137 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 196
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 197 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 233
>ref|NP_613494.1| (NC_003551) Predicted GTPase of the YihA family [Methanopyrus
kandleri AV19]
gb|AAM01424.1| (AE010319) Predicted GTPase of the YihA family [Methanopyrus
kandleri AV19]
Length = 203
Score = 45.1 bits (105), Expect = 5e-04
Identities = 33/104 (31%), Positives = 53/104 (50%), Gaps = 11/104 (10%)
Query: 26 EMVVLGRSNVGKSSFINTLL-GKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVID 84
E+V++GRSNVGKSS I + G + PG TR F + L ++D
Sbjct: 3 EIVLVGRSNVGKSSLIRAITRGAADVRVGKRPGVTRKPVF---------HELDGELVLVD 53
Query: 85 LPGFGY-AKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHL 127
+PGFG+ + V + ++ + + L + +I IH+VDA+ L
Sbjct: 54 MPGFGFMSGVPRRYQERVKDLIVRYLEEKDNILFAIHVVDAKAL 97
>gb|AAF01207.1|AF180526_1 (AF180526) E-septin short form [Rattus norvegicus]
Length = 334
Score = 44.7 bits (104), Expect = 7e-04
Identities = 28/97 (28%), Positives = 51/97 (51%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATP-GKTRLANFF---STTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + R+ S T + +E +R V
Sbjct: 50 IMVVGQSGLGKSTLINTLFKSKISRKSVQPISEERIPKTIEIKSITHDIEEKGVRMKLTV 109
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 110 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 146
>ref|NP_114025.1| (NM_031837) E-septin [Rattus norvegicus]
gb|AAF01206.1|AF180525_1 (AF180525) E-septin long form [Rattus norvegicus]
Length = 405
Score = 44.7 bits (104), Expect = 7e-04
Identities = 28/97 (28%), Positives = 51/97 (51%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATP-GKTRLANFF---STTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + R+ S T + +E +R V
Sbjct: 121 IMVVGQSGLGKSTLINTLFKSKISRKSVQPISEERIPKTIEIKSITHDIEEKGVRMKLTV 180
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 181 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 217
>gb|AAF03376.1|AF170253_1 (AF170253) septin-like protein [Rattus norvegicus]
Length = 564
Score = 44.7 bits (104), Expect = 7e-04
Identities = 28/97 (28%), Positives = 51/97 (51%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATP-GKTRLANFF---STTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + R+ S T + +E +R V
Sbjct: 281 IMVVGQSGLGKSTLINTLFKSKISRKSVQPISEERIPKTIEIKSITHDIEEKGVRMKLTV 340
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 341 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 377
>gb|AAF03391.1|AF173899_1 (AF173899) septin-like protein SLP-b [Rattus norvegicus]
Length = 479
Score = 44.7 bits (104), Expect = 7e-04
Identities = 28/97 (28%), Positives = 51/97 (51%), Gaps = 12/97 (12%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATP-GKTRLANFF---STTWEDKENALRATFNV 82
++V+G+S +GKS+ INTL +++ S P + R+ S T + +E +R V
Sbjct: 196 IMVVGQSGLGKSTLINTLFKSKISRKSVQPISEERIPKTIEIKSITHDIEEKGVRMKLTV 255
Query: 83 IDLPGFG--------YAKVSKSLKKEWEGFLWELLSV 111
ID PGFG + + K + ++E +L E +++
Sbjct: 256 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNI 292
>dbj|BAB01956.1| (AP002063) GTP-binding protein-like [Arabidopsis thaliana]
Length = 537
Score = 44.3 bits (103), Expect = 9e-04
Identities = 30/79 (37%), Positives = 40/79 (49%), Gaps = 8/79 (10%)
Query: 18 QCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALR 77
Q P L + ++GR NVGKS+ N L+G+N A PG TR + + W D+E
Sbjct: 26 QIPEHLLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQE---- 81
Query: 78 ATFNVIDLPGFGYAKVSKS 96
F V+D G VSKS
Sbjct: 82 --FVVVDTG--GVMTVSKS 96
>ref|NP_247293.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q57768|ENGB_METJA Probable GTP-binding protein engB
pir||A64340 hypothetical protein MJ0320 - Methanococcus jannaschii
gb|AAB98305.1| (U67486) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 219
Score = 44.3 bits (103), Expect = 9e-04
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 15/80 (18%)
Query: 26 EMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDL 85
+++V+GRSNVGKS+F+ + G+ + PG T N + + ++D+
Sbjct: 26 KVIVVGRSNVGKSTFVRLMTGRKDIRVGKKPGVTLKINEYD----------MGEYILVDM 75
Query: 86 PGFGY-----AKVSKSLKKE 100
PGFGY KV + +K E
Sbjct: 76 PGFGYMAGLPKKVQEKIKDE 95
>ref|NP_107728.1| (NC_002678) GTP-binding protei [Mesorhizobium loti]
dbj|BAB53514.1| (AP003011) GTP-binding protei [Mesorhizobium loti]
Length = 479
Score = 43.9 bits (102), Expect = 0.001
Identities = 27/72 (37%), Positives = 37/72 (50%), Gaps = 6/72 (8%)
Query: 23 LTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNV 82
+T ++ ++GR NVGKS+ N L+G+ LA TPG TR + D F+V
Sbjct: 1 MTFKVAIIGRPNVGKSTLFNRLVGRKLALVDDTPGVTRDRRVHAAKLYDLH------FDV 54
Query: 83 IDLPGFGYAKVS 94
ID GF A S
Sbjct: 55 IDTAGFEDAGAS 66
>ref|NP_623074.1| (NC_003869) predicted GTPases [Thermoanaerobacter tengcongensis]
gb|AAM24678.1| (AE013104) predicted GTPases [Thermoanaerobacter tengcongensis]
Length = 277
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 28 VVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLPG 87
++LG NVGKS+FINTL+G+ AK+ PG T+ ++ T + D ++D PG
Sbjct: 122 MILGIPNVGKSTFINTLIGRKKAKTGDKPGVTKSLHWIRTPYLD----------LLDTPG 171
Query: 88 FGYAK 92
+ K
Sbjct: 172 VLWPK 176
>ref|NP_113427.1| (NC_002753) hypothetical protein [Guillardia theta]
emb|CAC26996.1| (AJ010592) hypothetical protein [Guillardia theta]
Length = 496
Score = 43.1 bits (100), Expect = 0.002
Identities = 45/174 (25%), Positives = 86/174 (48%), Gaps = 16/174 (9%)
Query: 5 KDAHFLTSSSQLFQCPASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANF 64
K +L +S +L + S T+++ ++G+ NVGKS+F+N LLG+ + S TPG T ++
Sbjct: 218 KIVSYLPNSKKLSE---SYTTKVSIIGKPNVGKSTFVNKLLGQYRSIVSDTPGTT--SDS 272
Query: 65 FSTTWEDKENALRATFNVIDLPGFGYAKVSKSLKKEWEGFLWE--LLSVRVSIKLFIHLV 122
+ +N +N ID G K KS++ E F+ L SV+ S + + ++
Sbjct: 273 VDSYISGGKNC--NVYNFIDTAGI---KRKKSIEFGIEYFMVNRTLKSVQKS-ECVLFMI 326
Query: 123 DARHLDLEIDKNAKENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPKPFL 176
D + + D + +++ ++ + L K+DK+ K + ++ K L
Sbjct: 327 DINNGITDQDVKISD---IIVKENKCCVILLNKWDKIKKKMSKQTLIDLCKTSL 377
>ref|NP_562623.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB81413.1| (AP003191) conserved hypothetical protein [Clostridium perfringens]
Length = 281
Score = 42.7 bits (99), Expect = 0.003
Identities = 36/143 (25%), Positives = 66/143 (45%), Gaps = 21/143 (14%)
Query: 21 ASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATF 80
A +T+ +V+G NVGKS+FIN + N+AK+ PG T+ + T +
Sbjct: 117 AKITTRAMVVGIPNVGKSTFINKMAKNNIAKTGDRPGVTKNKQWIKT---------KLGI 167
Query: 81 NVIDLPGFGYAKVSK---SLKKEWEGFLWELL--SVRVSIKLFIHLVDARHLDL------ 129
++D PG + K L + G + + + + +++KL L + +L
Sbjct: 168 ELMDTPGVLWPKFEDEIVGLNLAFTGAIKDEIMDTEELALKLVERLQETNPEELMTRYKL 227
Query: 130 -EIDKNAKENIQALLRPDQAYLS 151
E+ +N +N+ A+ R A +S
Sbjct: 228 TELHENPLDNLDAIARKRGAIMS 250
>ref|NP_484527.1| (NC_003272) GTP binding protein [Nostoc sp. PCC 7120]
dbj|BAB72441.1| (AP003582) GTP binding protein [Nostoc sp. PCC 7120]
Length = 453
Score = 42.7 bits (99), Expect = 0.003
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLP 86
+ ++GR NVGKS+ +N L G+ A PG TR + W D+E F V+D
Sbjct: 6 VAIIGRPNVGKSTLVNRLAGEQTAIVHDEPGVTRDRTYLPAYWSDRE------FQVVDTG 59
Query: 87 G 87
G
Sbjct: 60 G 60
>sp|P39827|CC10_CANAL Cell division control protein 10
emb|CAA81090.1| (Z25870) deduced Candida albicans CDC10 protein
Length = 357
Score = 42.7 bits (99), Expect = 0.003
Identities = 27/70 (38%), Positives = 36/70 (50%), Gaps = 10/70 (14%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDK-------ENALRAT 79
++V+GRS +GKS+ +NTL L S G+ + T E K EN +R
Sbjct: 40 IMVVGRSGLGKSTLVNTLFSSKLTTSQ---GRKSPSEPIEKTTEIKVASHSLLENNVRLN 96
Query: 80 FNVIDLPGFG 89
NVID PGFG
Sbjct: 97 INVIDTPGFG 106
>ref|NP_662663.1| (NC_002932) GTP-binding protein [Chlorobium tepidum TLS]
gb|AAM73005.1| (AE012931) GTP-binding protein [Chlorobium tepidum TLS]
Length = 437
Score = 42.4 bits (98), Expect = 0.003
Identities = 35/111 (31%), Positives = 51/111 (45%), Gaps = 15/111 (13%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLP 86
+ ++GR NVGKS+ N +L + A TPG TR + W+ K+ L T
Sbjct: 5 IALVGRPNVGKSTLFNRILRQKSAIVDPTPGVTRDRHISPGEWQGKQFLLMDT------- 57
Query: 87 GFGYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDAR----HLDLEIDK 133
GYA + +L K L + + I +VDAR +LDL+I K
Sbjct: 58 -GGYAPENDTLSK---AMLEQTMRAIEDADAVIFIVDARSGLTYLDLDIAK 104
>pir||S43278 cell division control protein CDC10 - yeast (Candida albicans)
Length = 357
Score = 42.4 bits (98), Expect = 0.003
Identities = 27/70 (38%), Positives = 36/70 (50%), Gaps = 10/70 (14%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDK-------ENALRAT 79
++V+GRS +GKS+ +NTL L S G+ + T E K EN +R
Sbjct: 40 IMVVGRSGLGKSTLVNTLFSSKLTTSQ---GRKLPSEPIEKTTEIKVASHSLLENNVRLN 96
Query: 80 FNVIDLPGFG 89
NVID PGFG
Sbjct: 97 INVIDTPGFG 106
>ref|NP_488860.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB76519.1| (AP003597) ORF_ID:all4820~hypothetical protein [Nostoc sp. PCC
7120]
Length = 628
Score = 42.4 bits (98), Expect = 0.003
Identities = 21/66 (31%), Positives = 35/66 (52%), Gaps = 6/66 (9%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLP 86
+++ GR+ GKSS INT+ NLA+ P + N+ W+ ++ T N++D P
Sbjct: 290 ILLAGRTGAGKSSLINTIFQSNLAEVDVLPSTAEIQNYH---WQTQDG---ETLNLLDTP 343
Query: 87 GFGYAK 92
G+ K
Sbjct: 344 GYEQVK 349
>ref|NP_484788.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB72702.1| (AP003583) ORF_ID:all0745~hypothetical protein [Nostoc sp. PCC
7120]
Length = 293
Score = 42.0 bits (97), Expect = 0.004
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 28 VVLGRSNVGKSSFINTLLGKNLAKSSATPGKTR 60
VV+G NVGKS+ IN LLGK + +S+A PG TR
Sbjct: 133 VVIGFPNVGKSALINRLLGKRVVESAARPGVTR 165
>emb|CAC32261.1| (AL583933) MMR_HSR1 GTP-binding protein [Leishmania major]
Length = 627
Score = 42.0 bits (97), Expect = 0.004
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 9/68 (13%)
Query: 29 VLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLPGF 88
V+G NVGKSS INTL K++ K + PG+T++ + + T R+ F +ID PG
Sbjct: 323 VIGYPNVGKSSLINTLRRKSVCKVAPIPGETKVWQYVALT--------RSIF-LIDCPGV 373
Query: 89 GYAKVSKS 96
Y + S +
Sbjct: 374 VYDRESNN 381
>ref|NP_009928.1| (NC_001135) cell division cycle blocked at 36 degree C; Cdc10p
[Saccharomyces cerevisiae]
sp|P25342|CC10_YEAST Cell division control protein 10
pir||S19441 CDC10 protein - yeast (Saccharomyces cerevisiae)
gb|AAB49377.1| (L16549) cell division cycle protein [Saccharomyces cerevisiae]
emb|CAA42339.1| (X59720) cell division control protein [Saccharomyces cerevisiae]
gb|AAD13856.1|S48552_11 (S48552) orf YCR022 [Saccharomyces cerevisiae]
Length = 322
Score = 42.0 bits (97), Expect = 0.004
Identities = 46/166 (27%), Positives = 74/166 (43%), Gaps = 30/166 (18%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKS------SATPGKTRLANFFSTTWEDKENALRATF 80
++V+G+S +GKS+ INTL +L S SA P T+ +T E+ +R
Sbjct: 35 IMVVGQSGLGKSTLINTLFASHLIDSATGDDISALP-VTKTTEMKISTHTLVEDRVRLNI 93
Query: 81 NVIDLPGFG--------YAKVSKSLKKEWEGFLWELLSV---RVSIKLFIHLV------- 122
NVID PGFG + + K +K++ +L + L+ R +H +
Sbjct: 94 NVIDTPGFGDFIDNSKAWEPIVKYIKEQHSQYLRKELTAQRERFITDTRVHAILYFLQPN 153
Query: 123 --DARHLDLEIDKNAKE---NIQALLRPDQAYLSLFTKFDKLNKNE 163
+ LD+E K E I + + D L T+F +L +NE
Sbjct: 154 GKELSRLDVEALKRLTEIANVIPVIGKSDTLTLDERTEFRELIQNE 199
>ref|NP_441526.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|P74120|ENGA_SYNY3 Probable GTP-binding protein engA
pir||S75645 probable GTP binding protein slr1974 - Synechocystis sp. (strain
PCC 6803)
dbj|BAA18206.1| (D90912) ORF_ID:slr1974~hypothetical protein [Synechocystis sp.
PCC 6803]
Length = 452
Score = 42.0 bits (97), Expect = 0.004
Identities = 24/71 (33%), Positives = 35/71 (48%), Gaps = 6/71 (8%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLP 86
+ ++GR NVGKS+F+N L G A PG TR + W D++ F V+D
Sbjct: 6 VAIIGRPNVGKSTFVNRLAGNQQAIVHDQPGITRDRTYRPAFWRDRD------FQVVDTG 59
Query: 87 GFGYAKVSKSL 97
G + S+ L
Sbjct: 60 GLVFNDDSEFL 70
>ref|NP_347088.1| (NC_003030) Ferrous iron transport protein B (feoB-2) [Clostridium
acetobutylicum]
gb|AAK78428.1|AE007559_6 (AE007559) Ferrous iron transport protein B (feoB-2) [Clostridium
acetobutylicum]
Length = 587
Score = 41.6 bits (96), Expect = 0.006
Identities = 29/100 (29%), Positives = 44/100 (44%), Gaps = 15/100 (15%)
Query: 29 VLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLPGF 88
++G NVGK+S N L G N + N+ T E KE L ++DLPG
Sbjct: 6 LIGNPNVGKTSLFNVLTGSN----------QYVGNWAGVTVEKKEGYLEKNIKIVDLPGI 55
Query: 89 GYAKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLD 128
+ +K + FL + + I++VDA +LD
Sbjct: 56 YAMDTYSNEEKVSKEFL-----KNGDVDIIINIVDAANLD 90
>sp|Q9V288|ENGB_PYRAB Probable GTP-binding protein engB
Length = 211
Score = 41.6 bits (96), Expect = 0.006
Identities = 25/68 (36%), Positives = 37/68 (53%), Gaps = 11/68 (16%)
Query: 23 LTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNV 82
L + +V +GRSNVGKS+ I L GK + + PG TR W++ + +
Sbjct: 21 LMATIVFVGRSNVGKSTLIYRLTGKRVRRGK-RPGVTR--KIIEIEWKNHK--------I 69
Query: 83 IDLPGFGY 90
ID+PGFG+
Sbjct: 70 IDMPGFGF 77
>ref|NP_471385.1| (NC_003212) similar to unknown protein [Listeria innocua]
emb|CAC97281.1| (AL596170) similar to unknown protein [Listeria innocua]
Length = 436
Score = 41.2 bits (95), Expect = 0.007
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLP 86
+ ++GR NVGKS+ N ++G+ ++ PG TR + S W KE FN+ID
Sbjct: 6 VAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKE------FNIIDTG 59
Query: 87 G 87
G
Sbjct: 60 G 60
>ref|NP_406380.1| (NC_003143) putative GTP-binding protein [Yersinia pestis]
emb|CAC92126.1| (AJ414154) putative GTP-binding protein [Yersinia pestis]
Length = 495
Score = 41.2 bits (95), Expect = 0.007
Identities = 22/63 (34%), Positives = 35/63 (54%)
Query: 20 PASLTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRAT 79
P +L ++ ++GR NVGKS+ N +LG++ PG TR + + T +D+E L T
Sbjct: 203 PRTLPIKLAIVGRPNVGKSTLTNRILGEDRVVVYDMPGTTRDSIYIPMTRDDREYILIDT 262
Query: 80 FNV 82
V
Sbjct: 263 AGV 265
>ref|NP_465461.1| (NC_003210) similar to unknown protein [Listeria monocytogenes
EGD-e]
emb|CAD00015.1| (AL591981) similar to unknown protein [Listeria monocytogenes]
Length = 436
Score = 41.2 bits (95), Expect = 0.007
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLP 86
+ ++GR NVGKS+ N ++G+ ++ PG TR + S W KE FN+ID
Sbjct: 6 VAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYNSAEWLGKE------FNIIDTG 59
Query: 87 G 87
G
Sbjct: 60 G 60
>ref|NP_187815.1| (NM_112042) GTPase, putative [Arabidopsis thaliana]
gb|AAG51052.1|AC069473_14 (AC069473) GTPase, putative; 34281-30152 [Arabidopsis thaliana]
Length = 659
Score = 40.8 bits (94), Expect = 0.010
Identities = 28/74 (37%), Positives = 38/74 (50%), Gaps = 8/74 (10%)
Query: 23 LTSEMVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNV 82
L + ++GR NVGKS+ N L+G+N A PG TR + + W D+E F V
Sbjct: 153 LLQRVAIVGRPNVGKSALFNRLVGENRAIVVDEPGVTRDRLYGRSYWGDQE------FVV 206
Query: 83 IDLPGFGYAKVSKS 96
+D G VSKS
Sbjct: 207 VDTG--GVMTVSKS 218
>sp|P40797|PNUT_DROME Peanut protein
pir||A54294 cell division control protein homolog peanut - fruit fly
(Drosophila melanogaster)
gb|AAA19603.1| (U08103) Peanut [Drosophila melanogaster]
Length = 539
Score = 40.8 bits (94), Expect = 0.010
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPG----KTRLANFFSTTWEDKENALRATFNV 82
++V+G S +GKS+ IN++ ++ + PG K + +T KEN + T V
Sbjct: 145 LMVVGASGLGKSTLINSMFLSDIYNAEQYPGPSLRKKKTVAVEATKVMLKENGVNLTLTV 204
Query: 83 IDLPGFGYA 91
+D PGFG A
Sbjct: 205 VDTPGFGDA 213
>ref|NP_594754.1| (NC_003424) septin homolog spn1 [Schizosaccharomyces pombe]
sp|O36023|SPN1_SCHPO Septin homolog spn1
emb|CAB11714.2| (Z98980) septin homolog spn1 [Schizosaccharomyces pombe]
gb|AAB53692.2| (U31742) spn1+ [Schizosaccharomyces pombe]
Length = 469
Score = 40.8 bits (94), Expect = 0.010
Identities = 28/72 (38%), Positives = 39/72 (53%), Gaps = 11/72 (15%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNL---AKSSAT------PGKTRLANFFSTTWEDKENALR 77
++VLG S GKS+ +NTLL +++ + S T P T + N S+ E EN +
Sbjct: 98 VLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFGVNPEPTVMIN--SSAVEIVENGIS 155
Query: 78 ATFNVIDLPGFG 89
NVID PGFG
Sbjct: 156 LQLNVIDTPGFG 167
>ref|NP_477064.1| (NM_057716) pnut-P1; Peanut; septin; Enhancer of seven in absentia
8 [Drosophila melanogaster]
gb|AAF59112.1| (AE003838) CG8705-PB [Drosophila melanogaster]
gb|AAL13892.1| (AY058663) LD37170p [Drosophila melanogaster]
gb|AAM68857.1| (AE003838) CG8705-PA [Drosophila melanogaster]
Length = 539
Score = 40.8 bits (94), Expect = 0.010
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPG----KTRLANFFSTTWEDKENALRATFNV 82
++V+G S +GKS+ IN++ ++ + PG K + +T KEN + T V
Sbjct: 145 LMVVGASGLGKSTLINSMFLSDIYNAEQYPGPSLRKKKTVAVEATKVMLKENGVNLTLTV 204
Query: 83 IDLPGFGYA 91
+D PGFG A
Sbjct: 205 VDTPGFGDA 213
>ref|NP_577843.1| (NC_003413) GTP-binding protein [Pyrococcus furiosus DSM 3638]
gb|AAL80238.1| (AE010137) GTP-binding protein [Pyrococcus furiosus DSM 3638]
Length = 190
Score = 40.8 bits (94), Expect = 0.010
Identities = 51/187 (27%), Positives = 84/187 (44%), Gaps = 32/187 (17%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNLAKSSATPGKTRLANFFSTTWEDKENALRATFNVIDLP 86
+V +GRSNVGKS+ I L GK + + PG TR W + + +ID+P
Sbjct: 4 IVFVGRSNVGKSTLIYQLTGKKVRRGK-RPGVTR--KIIEIEWRNHK--------IIDMP 52
Query: 87 GFGY-----AKVSKSLKKEWEGFLWELLSVRVSIKLFIHLVDARHLDLEIDKNAK----- 136
GFG+ +V + +K E F+ +I + + +VD + I++ K
Sbjct: 53 GFGFMAGLPKEVQERIKDEIVHFIENNAK---NIDVAVLVVDGKAAPEIIERWEKRGEIP 109
Query: 137 ---ENIQALLRPDQAYLSLFTKFDKLNKNEQHRLFLNAPK---PFLINTAHFNALSSKYP 190
E Q L + + K DK+ KN Q ++ A K PF F +S+K+
Sbjct: 110 IDVEFYQFLTDLEIPTIVAVNKIDKI-KNVQGVIYFLAEKFGVPFSEIEKVFVPISAKFG 168
Query: 191 T-LEIVR 196
T +E+++
Sbjct: 169 TNIEVLK 175
>pir||T38815 septin homolog spn1 - fission yeast (Schizosaccharomyces pombe)
Length = 410
Score = 40.8 bits (94), Expect = 0.010
Identities = 28/72 (38%), Positives = 39/72 (53%), Gaps = 11/72 (15%)
Query: 27 MVVLGRSNVGKSSFINTLLGKNL---AKSSAT------PGKTRLANFFSTTWEDKENALR 77
++VLG S GKS+ +NTLL +++ + S T P T + N S+ E EN +
Sbjct: 39 VLVLGESGSGKSTLVNTLLNRDVYPPTQKSLTGDFGVNPEPTVMIN--SSAVEIVENGIS 96
Query: 78 ATFNVIDLPGFG 89
NVID PGFG
Sbjct: 97 LQLNVIDTPGFG 108
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.320 0.134 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,722,593
Number of Sequences: 1026957
Number of extensions: 4595128
Number of successful extensions: 13746
Number of sequences better than 1.0e-02: 110
Number of HSP's better than 0.0 without gapping: 61
Number of HSP's successfully gapped in prelim test: 49
Number of HSP's that attempted gapping in prelim test: 13522
Number of HSP's gapped (non-prelim): 120
length of query: 208
length of database: 324,149,939
effective HSP length: 116
effective length of query: 92
effective length of database: 205,022,927
effective search space: 18862109284
effective search space used: 18862109284
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 94 (40.8 bits)