BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15646180|ref|NP_208364.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(254 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_208364.1| (NC_000915) conserved hypothetical protein... 519 e-146
ref|NP_224199.1| (NC_000921) putative [Helicobacter pylori ... 499 e-140
ref|NP_281827.1| (NC_002163) hypothetical protein Cj0644 [C... 266 2e-70
ref|NP_653987.1| (NC_003995) TatD_DNase, TatD related DNase... 196 2e-49
ref|NP_387920.1| (NC_000964) similar to hypothetical protei... 196 2e-49
ref|NP_604240.1| (NC_003454) seC-independent protein TATD [... 189 2e-47
ref|NP_563436.1| (NC_003366) conserved hypothetical protein... 186 2e-46
ref|NP_463716.1| (NC_003210) similar to conserved hypotheti... 181 5e-45
ref|NP_469569.1| (NC_003212) similar to conserved hypotheti... 180 2e-44
ref|NP_621811.1| (NC_003869) Mg-dependent DNase [Thermoanae... 175 4e-43
ref|NP_231648.1| (NC_002505) conserved hypothetical protein... 174 6e-43
ref|NP_371015.1| (NC_002758) conserved hypothetical protein... 174 6e-43
ref|NP_246614.1| (NC_002663) unknown [Pasteurella multocida... 174 1e-42
ref|NP_240920.1| (NC_002570) BH0054~unknown conserved prote... 174 1e-42
ref|NP_349590.1| (NC_003030) PHP superfamily hydrolase, YAB... 167 8e-41
ref|NP_221043.1| (NC_000963) unknown [Rickettsia prowazekii... 161 7e-39
gb|AAD54294.1| (AF174390) HI0454 [Haemophilus influenzae] 159 4e-38
ref|NP_438615.1| (NC_000907) conserved hypothetical protein... 159 4e-38
ref|NP_660686.1| (NC_004061) hypothetical 29.8 kD protein i... 157 1e-37
ref|NP_287234.1| (NC_002655) orf, hypothetical protein [Esc... 156 2e-37
ref|NP_251649.1| (NC_002516) conserved hypothetical protein... 154 7e-37
ref|NP_519908.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 154 9e-37
ref|NP_360682.1| (NC_003103) unknown [Rickettsia conorii] >... 154 1e-36
ref|NP_228476.1| (NC_000853) conserved hypothetical protein... 153 2e-36
ref|NP_455695.1| (NC_003198) conserved hypothetical protein... 152 3e-36
ref|NP_460172.1| (NC_003197) putative metal-dependent hydro... 152 3e-36
ref|NP_214412.1| (NC_000918) hypothetical protein [Aquifex ... 151 7e-36
ref|NP_539903.1| (NC_003317) SEC-INDEPENDENT PROTEIN TATD [... 150 1e-35
ref|NP_240173.1| (NC_002528) hypothetical protein [Buchnera... 149 3e-35
ref|NP_385706.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 148 5e-35
ref|NP_532185.1| (NC_003304) conserved hypothetical protein... 147 1e-34
ref|NP_354501.1| (NC_003062) AGR_C_2756p [Agrobacterium tum... 147 1e-34
ref|NP_273813.1| (NC_003112) conserved hypothetical protein... 146 2e-34
ref|NP_268614.1| (NC_002737) conserved hypothetical protein... 146 2e-34
ref|NP_102218.1| (NC_002678) hypothetical protein [Mesorhiz... 145 3e-34
ref|NP_283761.1| (NC_003116) hypothetical protein NMA0982 [... 145 5e-34
ref|NP_266843.1| (NC_002662) conserved hypothetical protein... 144 1e-33
ref|NP_606528.1| (NC_003485) conserved hypothetical protein... 143 2e-33
ref|NP_325845.1| (NC_002771) conserved hypothetical protein... 140 1e-32
ref|NP_346418.1| (NC_003028) hydrolase, putative [Streptoco... 140 1e-32
ref|NP_440686.1| (NC_000911) hypothetical protein [Synechoc... 139 2e-32
ref|NP_405188.1| (NC_003143) putative deoxyribonuclease [Ye... 137 1e-31
ref|NP_220110.1| (NC_000117) PHP superfamily hydrolase [Chl... 133 2e-30
ref|NP_297256.1| (NC_002620) mttC protein, putative [Chlamy... 132 3e-30
ref|NP_215524.1| (NC_000962) hypothetical protein Rv1008 [M... 130 2e-29
ref|NP_229762.1| (NC_002505) conserved hypothetical protein... 129 3e-29
ref|NP_224982.1| (NC_000922) PHP superfamily (urease/pyrimi... 129 3e-29
ref|NP_077847.1| (NC_002162) hypothetical [Ureaplasma ureal... 128 7e-29
ref|NP_600136.1| (NC_003450) COG0084:Mg-dependent DNase [Co... 126 3e-28
ref|NP_485633.1| (NC_003272) hypothetical protein [Nostoc s... 125 3e-28
ref|NP_662690.1| (NC_002932) Sec-independent protein transl... 124 8e-28
ref|NP_299199.1| (NC_002488) type V secretory pathway prote... 124 8e-28
ref|NP_301298.1| (NC_002677) conserved hypothetical protein... 124 1e-27
ref|NP_640669.1| (NC_003919) type V secretory pathway prote... 122 3e-27
ref|NP_293870.1| (NC_001263) conserved hypothetical protein... 122 3e-27
ref|NP_275376.1| (NC_000916) conserved protein [Methanother... 121 6e-27
ref|NP_326367.1| (NC_002771) conserved hypothetical protein... 120 1e-26
ref|NP_072669.1| (NC_000908) conserved hypothetical protein... 120 1e-26
ref|NP_635694.1| (NC_003902) type V secretory pathway prote... 120 1e-26
ref|NP_504476.1| (NM_072075) CD4.2.p [Caenorhabditis elegan... 120 1e-26
ref|NP_109697.1| (NC_000912) hydrolase [Mycoplasma pneumoni... 120 1e-26
ref|NP_627367.1| (NC_003888) conserved hypothetical protein... 117 9e-26
ref|NP_404080.1| (NC_003143) putative metalloenzyme [Yersin... 117 2e-25
ref|NP_613831.1| (NC_003551) Mg-dependent DNase [Methanopyr... 115 3e-25
ref|NP_231983.1| (NC_002505) conserved hypothetical protein... 115 6e-25
gb|AAF55876.1| (AE003734) CG3308 gene product [Drosophila m... 114 8e-25
gb|EAA03658.1| (AAAB01008799) agCP14769 [Anopheles gambiae ... 114 1e-24
ref|NP_418795.1| (NC_000913) Mg-dependent DNase [Escherichi... 113 2e-24
ref|NP_650963.1| (NM_142706) CG3308 gene product [Drosophil... 113 2e-24
ref|NP_619472.1| (NC_003552) membrane targeting/translocati... 112 3e-24
ref|NP_297470.1| (NC_002488) conserved hypothetical protein... 112 4e-24
ref|NP_212328.1| (NC_001318) conserved hypothetical protein... 112 5e-24
ref|NP_633309.1| (NC_003901) Sec-independent transport prot... 110 1e-23
gb|AAC19243.1| (AF067848) MttC [Escherichia coli] 109 3e-23
ref|NP_290471.1| (NC_002655) tatD gene product [Escherichia... 109 3e-23
ref|NP_312796.1| (NC_002695) cytoplasmic Dnase [Escherichia... 109 3e-23
ref|NP_458976.1| (NC_003198) conserved hypothetical protein... 109 3e-23
ref|NP_187000.1| (NM_111221) unknown protein [Arabidopsis t... 108 4e-23
ref|NP_519240.1| (NC_003295) PROBABLE DEOXYRIBONUCLEASE PRO... 108 4e-23
ref|NP_463420.1| (NC_003197) putative hydrolase [Salmonella... 108 6e-23
ref|NP_636799.1| (NC_003902) conserved hypothetical protein... 108 6e-23
ref|NP_418283.1| (NC_000913) Mg-dependent DNase [Escherichi... 107 9e-23
sp|P27859|TATD_ECOLI Deoxyribonuclease tatD (DNAse tatD) 107 9e-23
ref|NP_457775.1| (NC_003198) putative deoxyribonuclease [Sa... 107 9e-23
ref|NP_420629.1| (NC_002696) urease/pyrimidinase family pro... 107 1e-22
ref|NP_252254.1| (NC_002516) conserved hypothetical protein... 106 3e-22
ref|NP_462861.1| (NC_003197) putative hydrolase of PHP supe... 106 3e-22
ref|NP_219416.1| (NC_000919) conserved hypothetical protein... 105 4e-22
ref|NP_248591.1| (NC_000909) conserved hypothetical protein... 105 4e-22
ref|NP_378039.1| (NC_003106) 242aa long conserved hypotheti... 104 8e-22
ref|NP_335473.1| (NC_002755) conserved hypothetical protein... 103 2e-21
ref|NP_284651.1| (NC_003116) conserved hypothetical protein... 100 3e-20
ref|NP_274691.1| (NC_003112) conserved hypothetical protein... 98 1e-19
ref|NP_251556.1| (NC_002516) secretion protein MttC [Pseudo... 97 2e-19
ref|NP_055575.1| (NM_014760) KIAA0218 gene product [Homo sa... 96 4e-19
ref|NP_341622.1| (NC_002754) Conserved hypothetical protein... 95 6e-19
ref|NP_610248.1| (NM_136404) CG3358 gene product [Drosophil... 95 8e-19
emb|CAA69984.1| (Y08729) hypothetical protein [Acidianus am... 95 8e-19
gb|EAA11869.1| (AAAB01008960) agCP6279 [Anopheles gambiae s... 93 3e-18
ref|NP_578588.1| (NC_003413) hypothetical protein [Pyrococc... 91 2e-17
ref|NP_568352.1| (NM_121763) putative protein [Arabidopsis ... 90 2e-17
ref|NP_126742.1| (NC_000868) hypothetical protein [Pyrococc... 88 8e-17
ref|NP_114415.1| (NM_032026) CDA11 protein [Homo sapiens] >... 88 1e-16
ref|NP_190807.1| (NM_115099) putative protein [Arabidopsis ... 86 4e-16
ref|NP_438254.1| (NC_000907) conserved hypothetical protein... 85 9e-16
ref|NP_143104.1| (NC_000961) hypothetical protein [Pyrococc... 84 1e-15
ref|NP_219431.1| (NC_000919) conserved hypothetical protein... 82 7e-15
ref|NP_595590.1| (NC_003423) hypothetical protein; TatD_DNa... 82 7e-15
pir||T51461 hypothetical protein K10A8_50 - Arabidopsis tha... 81 1e-14
ref|XP_167403.1| (XM_167403) hypothetical protein XP_167403... 80 2e-14
pir||S56602 yjjV protein - Escherichia coli >gi|537218|gb|A... 79 5e-14
ref|NP_245879.1| (NC_002663) unknown [Pasteurella multocida... 79 5e-14
ref|NP_507534.1| (NM_075133) Y37H2A.1.p [Caenorhabditis ele... 76 3e-13
ref|NP_493691.1| (NM_061290) B0432.8.p [Caenorhabditis eleg... 75 9e-13
gb|AAL61823.1| (AY071865) hepatocarcinoma high expression p... 74 1e-12
ref|NP_348025.1| (NC_003030) Predicted hydrolase of PHP sup... 74 2e-12
ref|XP_129661.1| (XM_129661) RIKEN cDNA 1500010M24 [Mus mus... 74 2e-12
dbj|BAB23875.1| (AK005193) data source:SPTR, source key:P37... 73 3e-12
dbj|BAA21418.1| (AB004537) HYPOTHETICAL 47.4KD PROTEIN IN S... 73 3e-12
ref|NP_313363.1| (NC_002695) hypothetical protein [Escheric... 72 6e-12
ref|NP_502188.1| (NM_069787) Y24F12A.1.p [Caenorhabditis el... 72 8e-12
pir||T26559 hypothetical protein Y24F12A.b - Caenorhabditis... 72 8e-12
ref|NP_290992.1| (NC_002655) yjjV gene product [Escherichia... 71 1e-11
gb|AAH07066.1|AAH07066 (BC007066) Unknown (protein for MGC:... 69 4e-11
pir||A65189 yigW protein - Escherichia coli (strain K-12) >... 68 1e-10
ref|XP_059243.2| (XM_059243) similar to data source:SPTR, s... 68 1e-10
pir||S30730 hypothetical protein o206 - Escherichia coli >g... 67 1e-10
ref|NP_597531.1| (NC_003230) similarity to putative DEOXYRI... 66 4e-10
ref|NP_463843.1| (NC_003210) conserved hypothetical protein... 60 2e-08
ref|NP_009498.1| (NC_001134) Hypothetical ORF; Ybl055cp [Sa... 57 2e-07
ref|NP_559693.1| (NC_003364) conserved hypothetical protein... 57 2e-07
ref|XP_128306.1| (XM_128306) similar to CDA11 protein [Mus ... 56 4e-07
ref|NP_376839.1| (NC_003106) 239aa long conserved hypotheti... 56 4e-07
emb|CAB63556.1| (AL031746) conserved hypothetical protein, ... 55 1e-06
ref|NP_654152.1| (NC_003995) TatD_DNase, TatD related DNase... 54 2e-06
ref|NP_342501.1| (NC_002754) Conserved hypothetical protein... 52 5e-06
ref|NP_641803.1| (NC_003919) conserved hypothetical protein... 51 1e-05
pir||B65189 yigW protein - Escherichia coli (strain K-12) >... 50 2e-05
pir||S30731 hypothetical protein o113 - Escherichia coli 50 2e-05
ref|NP_613818.1| (NC_003551) Predicted metal-dependent hydr... 50 2e-05
ref|NP_247746.1| (NC_000909) conserved hypothetical protein... 48 9e-05
sp|P23918|YMES_BACST Putative deoxyribonuclease in metS 3'r... 48 9e-05
ref|NP_395956.1| (NC_003064) AGR_pAT_25p [Agrobacterium tum... 47 3e-04
sp|P45305|YG64_HAEIN Putative deoxyribonuclease HI1664 45 8e-04
ref|NP_439806.1| (NC_000907) conserved hypothetical protein... 45 8e-04
ref|NP_147217.1| (NC_000854) hypothetical protein [Aeropyru... 44 0.002
ref|NP_248386.1| (NC_000909) conserved hypothetical protein... 43 0.004
pir||T51070 hypothetical protein B2A19.40 [imported] - Neur... 42 0.008
ref|NP_051679.1| (NC_000959) conserved hypothetical protein... 42 0.008
emb|CAD11331.1| (AL390092) conserved hypothetical protein [... 42 0.008
>ref|NP_208364.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
pir||E64716 conserved hypothetical protein HP1573 - Helicobacter pylori
(strain 26695)
gb|AAD08613.1| (AE000655) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 254
Score = 519 bits (1336), Expect = e-146
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI
Sbjct: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
Query: 61 GAHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
GAHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF
Sbjct: 61 GAHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIGGVSTFK 180
SIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIGGVSTFK
Sbjct: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIGGVSTFK 180
Query: 181 NAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELA 240
NAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELA
Sbjct: 181 NAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELA 240
Query: 241 SLSTHNAQMLFSFP 254
SLSTHNAQMLFSFP
Sbjct: 241 SLSTHNAQMLFSFP 254
>ref|NP_224199.1| (NC_000921) putative [Helicobacter pylori J99]
pir||B71803 hypothetical protein jhp1481 - Helicobacter pylori (strain J99)
gb|AAD07053.1| (AE001569) putative [Helicobacter pylori J99]
Length = 254
Score = 499 bits (1285), Expect = e-140
Identities = 243/254 (95%), Positives = 249/254 (97%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
MFIDTHCHLDHKDYENDL+EVLKESLEKGVTQCVIPGADMKDLNRA+ ISEKFEGVFFAI
Sbjct: 1 MFIDTHCHLDHKDYENDLDEVLKESLEKGVTQCVIPGADMKDLNRAVGISEKFEGVFFAI 60
Query: 61 GAHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
GAHPYDVESFDE LFEKFV HQKCVAIGECGLDYYRLPEL+ERENYKSKQKEIFTKQIEF
Sbjct: 61 GAHPYDVESFDEGLFEKFVSHQKCVAIGECGLDYYRLPELSERENYKSKQKEIFTKQIEF 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIGGVSTFK 180
SIQHNKPLIIHIREASFDSLNLLK+YPKAFGVLHCFNAD MLLELSDRFYYGIGGVSTFK
Sbjct: 121 SIQHNKPLIIHIREASFDSLNLLKSYPKAFGVLHCFNADSMLLELSDRFYYGIGGVSTFK 180
Query: 181 NAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELA 240
NAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII+IETEELA
Sbjct: 181 NAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIHIETEELA 240
Query: 241 SLSTHNAQMLFSFP 254
SLSTHNAQ LF+FP
Sbjct: 241 SLSTHNAQTLFNFP 254
>ref|NP_281827.1| (NC_002163) hypothetical protein Cj0644 [Campylobacter jejuni]
pir||C81413 hypothetical protein Cj0644 [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB75280.1| (AL139075) hypothetical protein Cj0644 [Campylobacter jejuni]
Length = 271
Score = 266 bits (680), Expect = 2e-70
Identities = 124/254 (48%), Positives = 178/254 (69%), Gaps = 5/254 (1%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
+DTHCHLD + +++DL+E L + + G+ + +IPGAD+KDL A I+ K++ +FFA G
Sbjct: 14 VDTHCHLDSEAFKDDLDETLNRAFKNGIEKIIIPGADIKDLPYAATIAHKYKNIFFAAGV 73
Query: 63 HPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPE--LNERENYKSKQKEIFTKQIEF 120
HPY+++++DE + +++ +KCVA+GECGLDY+R E + K QK+IF Q+E
Sbjct: 74 HPYEIDNYDEKILRQYLCDEKCVAVGECGLDYFRFKSDLAEEIQKEKENQKKIFIAQLEL 133
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNADGMLLEL-SDRFYYGIGGVS 177
+I+ KP+IIH REA+ D+ +L Y K GVLHCFNA LL L + FY+GIGGV
Sbjct: 134 AIEFKKPVIIHSREANHDTYEILHGYSKDLVGGVLHCFNASEHLLTLFEEGFYFGIGGVL 193
Query: 178 TFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETE 237
TFKNAK+LVEILPKIPK++LLLETD+PYLTP P+RG RN P + K+ E++N+ +
Sbjct: 194 TFKNAKKLVEILPKIPKDKLLLETDAPYLTPEPYRGKRNEPLLTQFVVNKMCEVLNLSRK 253
Query: 238 ELASLSTHNAQMLF 251
EL + +N++ LF
Sbjct: 254 ELLEICFNNSEKLF 267
>ref|NP_653987.1| (NC_003995) TatD_DNase, TatD related DNase [Bacillus anthracis
A2012] [Bacillus anthracis str. A2012]
Length = 255
Score = 196 bits (499), Expect = 2e-49
Identities = 106/258 (41%), Positives = 161/258 (62%), Gaps = 13/258 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M DTH HL+ + +E DL+EV+ E GVT V+ G D + +AIE++E ++ ++ A+
Sbjct: 1 MLFDTHSHLNAEQFEEDLQEVIARMKEAGVTYTVVVGFDEATIKKAIELAEAYDFIYAAV 60
Query: 61 GAHPYD-VESFDESL--FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G HP D ++ +E L E+ H K VA+GE GLDY+ ++ K QKE+F KQ
Sbjct: 61 GWHPVDAIDMTEEHLAWLEELASHPKVVALGEMGLDYHW------DKSPKEIQKEVFRKQ 114
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFNADGMLLE--LSDRFYYGI 173
I + + P+IIH R+A+ D +++L+ N + G++HCF+ + E + F +
Sbjct: 115 ITLAKKVKLPIIIHNRDATQDIVDILEEENAAEVGGIMHCFSGSVEVAERCVDMNFLISL 174
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
GG TFKNAK+ E+ +IP +LL+ETD PYLTPHPFRG RN P+Y+ L+A++IA +
Sbjct: 175 GGPVTFKNAKKPKEVATEIPLEKLLIETDCPYLTPHPFRGKRNEPSYVKLVAEEIANLKG 234
Query: 234 IETEELASLSTHNAQMLF 251
I EE+A ++T NA+ LF
Sbjct: 235 ISYEEVAEITTKNAKALF 252
>ref|NP_387920.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|P37545|YABD_BACSU Putative deoxyribonuclease yabD
pir||S66068 conserved hypothetical protein yabD - Bacillus subtilis
dbj|BAA05274.1| (D26185) unknown [Bacillus subtilis]
emb|CAB11815.1| (Z99104) similar to hypothetical proteins [Bacillus subtilis]
Length = 255
Score = 196 bits (499), Expect = 2e-49
Identities = 105/258 (40%), Positives = 161/258 (61%), Gaps = 13/258 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M DTH HL+ + Y+ DLEEV++ + + V + V+ G D + RA+E+ E+++ ++ AI
Sbjct: 1 MLFDTHAHLNAEQYDTDLEEVIERAKAEKVERIVVVGFDRPTITRAMEMIEEYDFIYAAI 60
Query: 61 GAHPYD-VESFDESL--FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G HP D ++ +E L ++ H+K VAIGE GLDY+ ++ K QKE+F Q
Sbjct: 61 GWHPVDAIDMTEEDLAWIKELSAHEKVVAIGEMGLDYHW------DKSPKDIQKEVFRNQ 114
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNY--PKAFGVLHCFNADGMLLE--LSDRFYYGI 173
I + + N P+IIH R+A+ D + +LK G++HCF + + FY
Sbjct: 115 IALAKEVNLPIIIHNRDATEDVVTILKEEGAEAVGGIMHCFTGSAEVARECMKMNFYLSF 174
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
GG TFKNAK+ E++ +IP +RLL+ETD P+LTPHPFRG RN P+Y+ +A++IAE+
Sbjct: 175 GGPVTFKNAKKPKEVVKEIPNDRLLIETDCPFLTPHPFRGKRNEPSYVKYVAEQIAELKE 234
Query: 234 IETEELASLSTHNAQMLF 251
+ EE+AS++T NA+ LF
Sbjct: 235 MTFEEIASITTENAKRLF 252
>ref|NP_604240.1| (NC_003454) seC-independent protein TATD [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gb|AAL95539.1| (AE010639) seC-independent protein TATD [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 258
Score = 189 bits (481), Expect = 2e-47
Identities = 97/253 (38%), Positives = 157/253 (61%), Gaps = 11/253 (4%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
ID+H HL+ + ++ND EEV K +E+ + V G D++ +++E + K+ ++ IG
Sbjct: 10 IDSHVHLNLEQFDNDREEVFKR-IEEKLDFVVNIGFDLESSEKSVEYANKYPFIYAVIGF 68
Query: 63 HPYDVESFD---ESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIE 119
HP ++E + E E+ + K +AIGE GLDY+ + E +Q +IF KQ+E
Sbjct: 69 HPDEIEGYSDEAEKKLEELAKNPKVLAIGEIGLDYHWMTRPKE------EQWDIFRKQLE 122
Query: 120 FSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLE-LSDRFYYGIGGVST 178
+ + NKP++IH REA D++N+L +P G+LHC+ + + DRFY GIGGV T
Sbjct: 123 LARRVNKPVVIHTREAMEDTVNILNEFPDITGILHCYPGSVETAKRMIDRFYLGIGGVLT 182
Query: 179 FKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEE 238
FKNAK+LVE++ +IP +L++ETD PY+ P P+RG RN P Y + +K+AE+ N+ E+
Sbjct: 183 FKNAKKLVEVVKEIPIEKLVIETDCPYMAPTPYRGQRNEPIYTEEVVKKMAELKNMSYED 242
Query: 239 LASLSTHNAQMLF 251
+ ++ N + +F
Sbjct: 243 VVRITNKNTRKVF 255
>ref|NP_563436.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAB82226.1| (AP003194) conserved hypothetical protein [Clostridium perfringens]
Length = 256
Score = 186 bits (472), Expect = 2e-46
Identities = 96/253 (37%), Positives = 152/253 (59%), Gaps = 10/253 (3%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
DTH H D ++ D E V+KE E GV + G+D+ L +++E++++F+ + A+G H
Sbjct: 7 DTHAHYDSDSFDEDRENVIKELQENGVIGVLNCGSDLYGLRKSVELAKEFDMFYAAVGIH 66
Query: 64 PYDVESFDESL---FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P + + F+E + ++FV ++K AIGE GLDYY E + QKE+F Q++
Sbjct: 67 PENADEFNEDVVKEIKEFVKNEKVKAIGEIGLDYYW-----EENPPREVQKEVFRAQMKL 121
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLE--LSDRFYYGIGGVST 178
+ + N P++IH R+A D+L ++K +P GV+HCF+ + + +Y G GV T
Sbjct: 122 ADELNLPVVIHDRDAHKDTLEIMKEFPNVIGVVHCFSGSVEFAKECIKLGYYIGFTGVLT 181
Query: 179 FKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEE 238
FKNAK+LV++ +IP R+L+ETD P++ P PFRG RN YI I K++EI I EE
Sbjct: 182 FKNAKKLVDVCREIPAERMLVETDCPFMAPVPFRGKRNKSDYIEYIIDKMSEIRGISGEE 241
Query: 239 LASLSTHNAQMLF 251
+ + +N + LF
Sbjct: 242 MNEILLNNKKRLF 254
>ref|NP_463716.1| (NC_003210) similar to conserved hypothetical proteins [Listeria
monocytogenes EGD-e]
emb|CAC98400.1| (AL591973) similar to conserved hypothetical proteins [Listeria
monocytogenes]
Length = 257
Score = 181 bits (460), Expect = 5e-45
Identities = 101/259 (38%), Positives = 157/259 (59%), Gaps = 14/259 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M DTH HL+ + +++D+EEV+K + E VT+ + G + + ++RA+E++EK++ + +
Sbjct: 1 MLFDTHVHLNDEAFDDDIEEVIKRAQENDVTRMAVVGFNKETIDRALELAEKYDFISLIV 60
Query: 61 GAHPYDVESFDES----LFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
G HP D +F + L + + H K VA+GE GLDY+ + K Q E+F K
Sbjct: 61 GWHPTDAITFTDEDLEWLRDLALTHPKVVALGEMGLDYHW------DTSPKETQFEVFRK 114
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFNADGMLLE--LSDRFYYG 172
QI + + N P++IH REA+ D + +L+ + + G++HCF ++E L+ FY
Sbjct: 115 QIRLAKEVNLPIVIHNREATEDVVRILQEEHAEEVGGIMHCFGETVEVMEACLAMNFYIS 174
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
GG TFKNAK IP +RLL+ETD+PYL P P RG RN P Y+ L+A+KIAE+
Sbjct: 175 FGGTVTFKNAKLPKIAAQAIPIDRLLIETDAPYLAPTPNRGKRNEPGYVKLVAEKIAELK 234
Query: 233 NIETEELASLSTHNAQMLF 251
++ E+A+ ST NA+ LF
Sbjct: 235 EMKYSEIATHSTENAKRLF 253
>ref|NP_469569.1| (NC_003212) similar to conserved hypothetical proteins [Listeria
innocua]
emb|CAC95457.1| (AL596163) similar to conserved hypothetical proteins [Listeria
innocua]
Length = 257
Score = 180 bits (456), Expect = 2e-44
Identities = 99/259 (38%), Positives = 158/259 (60%), Gaps = 14/259 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M DTH HL+ + +++D+EEV+K + E VT+ + G + + ++RA+++++K++ ++ +
Sbjct: 1 MLFDTHVHLNDEAFDDDIEEVIKRAKENDVTRMAVVGFNKETIDRALKLADKYDFIYLIV 60
Query: 61 GAHPYDVESFDES----LFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
G HP D +F + L + + H K VA+GE GLDY+ + K Q E+F K
Sbjct: 61 GWHPTDAITFTDEDLEWLRDLALTHPKVVALGEMGLDYHW------DTSPKETQFEVFRK 114
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFNADGMLLE--LSDRFYYG 172
QI + + N P++IH REA+ D + +L+ + + G++HCF ++E L+ FY
Sbjct: 115 QIRLAKEVNLPIVIHNREATEDVVRILQEEHAEEIGGIMHCFGETVEVMEACLAMNFYIS 174
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
GG TFKNAK IP +RLL+ETD+PYL P P RG RN P Y+ L+A+KIAE+
Sbjct: 175 FGGTVTFKNAKLPKIAAQAIPIDRLLIETDAPYLAPTPNRGKRNEPGYVKLVAEKIAELK 234
Query: 233 NIETEELASLSTHNAQMLF 251
++ E+A+ ST NA+ LF
Sbjct: 235 EMKYSEIATHSTDNAKRLF 253
>ref|NP_621811.1| (NC_003869) Mg-dependent DNase [Thermoanaerobacter tengcongensis]
gb|AAM23415.1| (AE012984) Mg-dependent DNase [Thermoanaerobacter tengcongensis]
Length = 256
Score = 175 bits (444), Expect = 4e-43
Identities = 100/260 (38%), Positives = 149/260 (56%), Gaps = 13/260 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M ID+H HL+ + Y D E+V++E +K +T + G+++ + IE++ K++ ++ +
Sbjct: 1 MLIDSHAHLEDEKYNEDREKVIEEC-KKDLTFLINVGSNILTSKKTIELAHKYDFIYATV 59
Query: 61 GAHPYDVESFDESL--FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
G HP+D E + + EK K VAIGE GLDYY + K Q E F KQI
Sbjct: 60 GIHPHDAEREKDKIEEIEKLALEDKVVAIGEIGLDYYY------GDPPKEFQIEAFVKQI 113
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNY--PKAFGVLHCFNADGMLLE--LSDRFYYGIG 174
+ + P++IH R A D L +LK GV H ++ +++ +S FY +
Sbjct: 114 RLAKKLKLPIVIHDRVAHEDILKILKKEWTQDLKGVFHSYSGSVEMIKEVISMNFYISLS 173
Query: 175 GVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINI 234
G TFKNAK++ E+ ++P LL+ETDSPYLTP P+RG RN PTY+ +AQKIAEI I
Sbjct: 174 GTVTFKNAKKVREVAKEVPLEWLLIETDSPYLTPEPYRGKRNKPTYVKFVAQKIAEIKGI 233
Query: 235 ETEELASLSTHNAQMLFSFP 254
EE+ ++ NA LF+ P
Sbjct: 234 SFEEVCETTSQNAIKLFNLP 253
>ref|NP_231648.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||G82127 conserved hypothetical protein VC2014 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF95162.1| (AE004276) conserved hypothetical protein [Vibrio cholerae]
Length = 255
Score = 174 bits (442), Expect = 6e-43
Identities = 101/259 (38%), Positives = 145/259 (54%), Gaps = 14/259 (5%)
Query: 1 MFIDTHCHLDHKDYEN---DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVF 57
MF+D+HCHLD DY++ D+ +VL ++ + V + G + + + + E F V+
Sbjct: 1 MFVDSHCHLDKLDYQDLHADVSDVLDKAHQAKVEYLLSVGVTLDSFPKMLAMIEPFSQVY 60
Query: 58 FAIGAHPYDVES-FDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
+ G HP DV+S F LF ++ H + VAIGE GLDY+ PE + QK F +
Sbjct: 61 ASCGVHPLDVQSDFSLDLFHQYAQHPRVVAIGETGLDYHYQPETADL------QKLRFRQ 114
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKN--YPKAFGVLHCFNADGMLLELSDR--FYYG 172
QIE ++ NKPLIIH R A D+L LL+ + GV+HCF D + + FY
Sbjct: 115 QIETAVALNKPLIIHTRNAQQDTLQLLREGKAQQCGGVIHCFTEDLAFAQAAMELGFYIS 174
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
I G+ TF+ A L E++ +P +RLL+ETDSPYL P P RG N P Y+ +A IA +
Sbjct: 175 ISGIVTFRQATDLKEVVKALPLDRLLIETDSPYLAPVPHRGKENQPAYVVEVAAYIAALK 234
Query: 233 NIETEELASLSTHNAQMLF 251
+ E+A +T N Q LF
Sbjct: 235 GVSLTEVAQKTTQNFQNLF 253
>ref|NP_371015.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_373701.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
ref|NP_645263.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB41679.1| (AP003130) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB56653.1| (AP003359) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
dbj|BAB94311.1| (AP004823) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 257
Score = 174 bits (442), Expect = 6e-43
Identities = 94/260 (36%), Positives = 152/260 (58%), Gaps = 14/260 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M IDTH HL+ + Y++DL EV+ + E GV + + G + + RA+++ ++++ ++ I
Sbjct: 1 MLIDTHVHLNDEQYDDDLSEVITRAREAGVDRMFVVGFNKSTIERAMKLIDEYDFLYGII 60
Query: 61 GAHPYDVESFDES---LFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G HP D F E E H K + IGE GLDY+ ++ QKE+F KQ
Sbjct: 61 GWHPVDAIDFTEEHLEWIESLAQHPKVIGIGEMGLDYHW------DKSPADVQKEVFRKQ 114
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLL--KNYPKAFGVLHCFNADGMLLELSDR---FYYG 172
I + + P+IIH REA+ D +++L ++ + G++H F+ + ++ FY
Sbjct: 115 IALAKRLKLPIIIHNREATQDCIDILLEEHAEEVGGIMHSFSGSPEIADIVTNKLNFYIS 174
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
+GG TFKNAK+ E+ + RLL+ETD+PYL+PHP+RG RN P + L+A++IAE+
Sbjct: 175 LGGPVTFKNAKQPKEVAKHVSMERLLVETDAPYLSPHPYRGKRNEPARVTLVAEQIAELK 234
Query: 233 NIETEELASLSTHNAQMLFS 252
+ EE+ +T NA+ LF+
Sbjct: 235 GLSYEEVCEQTTKNAEKLFN 254
>ref|NP_246614.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK03759.1| (AE006204) unknown [Pasteurella multocida]
Length = 260
Score = 174 bits (440), Expect = 1e-42
Identities = 99/258 (38%), Positives = 143/258 (55%), Gaps = 15/258 (5%)
Query: 3 IDTHCHLDHKDYEN---DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
+D+HCHLD DYEN +++V+ +++E+ V + G + + KF+ V A
Sbjct: 4 VDSHCHLDALDYENLHSSVDDVVNKAMEREVKHLLAVGVTLTRFEQIYATLAKFKNVSLA 63
Query: 60 IGAHPYDV--ESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G HP D+ E FD K K VAIGE GLDYY E K+ Q+ IF Q
Sbjct: 64 CGVHPLDLDDEPFDADRLLKLADDPKVVAIGETGLDYYYSAE------NKTTQQAIFANQ 117
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLL--KNYPKAFGVLHCF--NADGMLLELSDRFYYGI 173
I+ + Q NKP+I+H R A D++ LL + K GVLHCF N D L Y +
Sbjct: 118 IQIANQLNKPVIVHTRSAREDTIRLLAENHADKCGGVLHCFTENWDMAKKGLDLGLYISL 177
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
G+ TFKNA+ + ++ ++P +RLL+ETDSPYL P P+RG +N P Y+ + + +A +
Sbjct: 178 SGIITFKNAEEIRDVARRVPLDRLLIETDSPYLAPVPYRGKQNQPAYVREVCEYVATLKG 237
Query: 234 IETEELASLSTHNAQMLF 251
+ EE A L+T N + LF
Sbjct: 238 VSFEEFAQLTTQNFERLF 255
>ref|NP_240920.1| (NC_002570) BH0054~unknown conserved protein [Bacillus halodurans]
dbj|BAB03773.1| (AP001507) BH0054~unknown conserved protein [Bacillus halodurans]
Length = 236
Score = 174 bits (440), Expect = 1e-42
Identities = 94/238 (39%), Positives = 147/238 (61%), Gaps = 13/238 (5%)
Query: 21 VLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAHPYD-VESFDESL--FEK 77
++K + E GV + V+ G D K ++RA+ + E+++ ++ A+G HP D ++ DE L E+
Sbjct: 1 MIKRAQEAGVKEMVVVGFDEKTIHRALALVERYDFIYAAVGWHPVDAIDMKDEHLVWLEE 60
Query: 78 FVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASF 137
GH K VA+GE GLDY+ ++ K QKE+F KQI + + P++IH R+A
Sbjct: 61 LAGHPKVVALGEMGLDYHW------DKSPKDVQKEVFRKQIALAKKVKLPIVIHNRDADR 114
Query: 138 DSLNLLKNYP--KAFGVLHCFNADGMLLE--LSDRFYYGIGGVSTFKNAKRLVEILPKIP 193
D +++L+ + G++HCF + + FY +GG TFKNAKR + ++P
Sbjct: 115 DIVDVLREEDAGQVGGIMHCFGGSVEIARECMEMNFYISLGGPVTFKNAKRPKLVAKEVP 174
Query: 194 KNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLF 251
+RLL+ETD PYL PHP+RG RN P Y+ L+A++IAE+ I EE+A ++T NA+ LF
Sbjct: 175 LDRLLIETDCPYLAPHPYRGKRNEPAYVKLVAEQIAELKEIPYEEVAKVTTANARKLF 232
>ref|NP_349590.1| (NC_003030) PHP superfamily hydrolase, YABD ortholog [Clostridium
acetobutylicum]
gb|AAK80930.1|AE007795_9 (AE007795) PHP superfamily hydrolase, YABD ortholog [Clostridium
acetobutylicum]
Length = 253
Score = 167 bits (424), Expect = 8e-41
Identities = 91/257 (35%), Positives = 146/257 (56%), Gaps = 10/257 (3%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M D H H D ++ D ++V+ E GV + G+ M+ +++E++EK++ + A+
Sbjct: 1 MIFDAHAHYDDDEFNEDRDKVINELKSNGVIGVLNCGSSMEGTLKSVELAEKYDFFYAAV 60
Query: 61 GAHPYDVESFDESLF---EKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G HP + FDE+ E K AIGE GLDYY + + QK++F KQ
Sbjct: 61 GIHPEYADKFDENTLKEIEALTKSSKVKAIGEIGLDYYY-----DENPPREVQKKVFIKQ 115
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLE--LSDRFYYGIGG 175
+E + + N P+IIH R+A D+L+++K +PK G +HCF+ + L +Y G G
Sbjct: 116 MELAEKLNLPVIIHDRDAHGDTLDIIKQFPKVKGEIHCFSGSVEFAKECLKLGYYLGFTG 175
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIE 235
V TFKNAK++V+++ +IP +++L+ETD PY+ P P RG RN YI I +KIA+I +I
Sbjct: 176 VVTFKNAKKVVKVVREIPLDKILVETDCPYMAPVPNRGKRNRSEYIEYIVEKIADIKSIL 235
Query: 236 TEELASLSTHNAQMLFS 252
+ + N + L +
Sbjct: 236 PINVKEQTASNVRKLLN 252
>ref|NP_221043.1| (NC_000963) unknown [Rickettsia prowazekii]
pir||E71674 hypothetical protein RP682 - Rickettsia prowazekii
emb|CAA15119.1| (AJ235272) unknown [Rickettsia prowazekii]
Length = 293
Score = 161 bits (407), Expect = 7e-39
Identities = 91/261 (34%), Positives = 148/261 (55%), Gaps = 20/261 (7%)
Query: 4 DTHCHLDHKDYEND-LEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
++ C D K Y+ L+ ++ +LE V ++DL ++I+E+++ VF ++G
Sbjct: 32 NSSCFFDTKMYDTVFLDSFIQRALENNVQYIQTICTKLEDLPIVLKIAEQYKNVFASVGV 91
Query: 63 HPYDVESFDESLFE----KFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
HP +V + + + HQK + IGE GLDYY P K Q++ F I
Sbjct: 92 HPCEVNDKKRLITDLEIIELTNHQKIIGIGETGLDYYHQPY------NKKLQRDSFIAHI 145
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNY---PKAFGVLHCF----NADGMLLELSDRFYY 171
+ N P+I+H REA D++++L + K G++HCF N +L++ Y
Sbjct: 146 SAASATNLPIIVHTREADEDTIDILTSAMHNSKFSGLIHCFASSKNLAAKMLDIG--LYI 203
Query: 172 GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEI 231
+ G+ TFKNA L EI+ IP +RLL+ETDSPYL P P RG +N P ++ +A+K+AE+
Sbjct: 204 SVSGIITFKNATNLQEIVKYIPLDRLLIETDSPYLAPTPMRGKQNEPAFVRYVAEKVAEL 263
Query: 232 INIETEELASLSTHNAQMLFS 252
NI ++E+ +++THN ++LFS
Sbjct: 264 KNITSQEVENVTTHNFKILFS 284
>gb|AAD54294.1| (AF174390) HI0454 [Haemophilus influenzae]
Length = 260
Score = 159 bits (401), Expect = 4e-38
Identities = 89/258 (34%), Positives = 138/258 (52%), Gaps = 15/258 (5%)
Query: 3 IDTHCHLDHKDYEN---DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
+D+HCHLD DYEN ++ +V++++ + V + G + +A + +F V A
Sbjct: 4 VDSHCHLDALDYENLHKNISDVVEKAHARDVKHLLAIGVTLSRFEQAYDSLREFNNVSLA 63
Query: 60 IGAHPYDVES--FDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G HP D E +D + K +AIGE GLDYY + K+ Q+ +F Q
Sbjct: 64 CGVHPLDFEEEPYDAERLLRLAQDPKVIAIGEIGLDYYYSAD------NKAAQQAVFGSQ 117
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNY--PKAFGVLHCFNADGMLLE--LSDRFYYGI 173
I+ + Q +KP+IIH R A D++ +L+ + K GV+HCF + L FY
Sbjct: 118 IDIANQLDKPVIIHTRSAGDDTIAMLRQHRAEKCGGVIHCFTETMEFAKKALDLGFYISC 177
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
G+ TFKNA+ + E++ +P RLL+ETDSPYL P P+RG N P Y + + +A +
Sbjct: 178 SGIVTFKNAEAIREVIRYVPMERLLVETDSPYLAPVPYRGKENQPAYTREVCEYVATLKG 237
Query: 234 IETEELASLSTHNAQMLF 251
+ E A ++T N + LF
Sbjct: 238 VSAEAFAQITTQNFERLF 255
>ref|NP_438615.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P44718|YCFH_HAEIN Putative deoxyribonuclease HI0454
pir||I64152 probable metal-dependent hydrolase (EC 3.-.-.-) HI0454 -
Haemophilus influenzae (strain Rd KW20)
gb|AAC22112.1| (U32728) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 260
Score = 159 bits (401), Expect = 4e-38
Identities = 89/258 (34%), Positives = 138/258 (52%), Gaps = 15/258 (5%)
Query: 3 IDTHCHLDHKDYEN---DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
+D+HCHLD DYEN ++ +V++++ + V + G + +A + +F V A
Sbjct: 4 VDSHCHLDALDYENLHKNISDVVEKAHARDVKHLLAIGVTLSRFEQAYDSLREFNNVSLA 63
Query: 60 IGAHPYDVES--FDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G HP D E +D + K +AIGE GLDYY + K+ Q+ +F Q
Sbjct: 64 CGVHPLDFEEEPYDAERLLRLAQDPKVIAIGEIGLDYYYSAD------NKAAQQAVFGSQ 117
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNY--PKAFGVLHCFNADGMLLE--LSDRFYYGI 173
I+ + Q +KP+IIH R A D++ +L+ + K GV+HCF + L FY
Sbjct: 118 IDIANQLDKPVIIHTRSAGDDTIAMLRQHRAEKCGGVIHCFTETMEFXKKALDLGFYISC 177
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
G+ TFKNA+ + E++ +P RLL+ETDSPYL P P+RG N P Y + + +A +
Sbjct: 178 SGIVTFKNAEAIREVIRYVPMERLLVETDSPYLAPVPYRGKENQPAYTREVCEYVATLKG 237
Query: 234 IETEELASLSTHNAQMLF 251
+ E A ++T N + LF
Sbjct: 238 VSAEAFAQITTQNFERLF 255
>ref|NP_660686.1| (NC_004061) hypothetical 29.8 kD protein in holB-ptsG [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
gb|AAM67897.1| (AE014110) hypothetical 29.8 kD protein in holB-ptsG [Buchnera
aphidicola str. Sg (Schizaphis graminum)]
Length = 264
Score = 157 bits (397), Expect = 1e-37
Identities = 99/264 (37%), Positives = 149/264 (55%), Gaps = 20/264 (7%)
Query: 3 IDTHCHLDHK--DYEND------LEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFE 54
ID+HCH+D D +ND +E++L ++ E V + + +++ + ++ ++
Sbjct: 4 IDSHCHIDQMNIDQKNDDLLHQEIEKILNKAYENHVKKFLTVSTSIQNFYKTKKLLSTYD 63
Query: 55 GVFFAIGAHPYDVESFDESLFE-KFVGHQKCV-AIGECGLDYYRLPELNERENYKSKQKE 112
+F++ G HP + E L E K + + KCV A+GE GLDYY E K+ Q++
Sbjct: 64 SIFYSCGIHPLYCQKEIECLNELKKLSYDKCVIALGETGLDYYYSFET------KNLQEK 117
Query: 113 IFTKQIEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFN-ADGMLLELSDR- 168
F + I +I NKP+IIH R A D++ +LK N K G+LH F ++ EL D
Sbjct: 118 FFREHIRIAITLNKPIIIHSRNAIKDTIKILKEENAEKCGGILHSFTESEKSAFELLDMG 177
Query: 169 FYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKI 228
FY G+ TFK + L L KIP +LL+ETDSPYL P P+RG +N P Y+ IA+KI
Sbjct: 178 FYISFSGIITFKKSIELCNTLKKIPLEKLLIETDSPYLAPIPYRGKKNQPAYLLDIAKKI 237
Query: 229 AEIINIETEELASLSTHNAQMLFS 252
A I I +ELA ++T+N LF+
Sbjct: 238 ALIKEISLKELAKITTNNFFTLFN 261
>ref|NP_287234.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_309505.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
ref|NP_415618.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P37346|YCFH_ECOLI Putative deoxyribonuclease ycfH
pir||A64854 probable metal-dependent hydrolase (EC 3.-.-.-) ycfH - Escherichia
coli
gb|AAC74184.1| (AE000210) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35907.1| (D90745) Hypothetical protein in holB 3'region . [Escherichia coli]
gb|AAG55846.1|AE005319_15 (AE005319) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB34901.1| (AP002555) hypothetical protein [Escherichia coli O157:H7]
Length = 265
Score = 156 bits (395), Expect = 2e-37
Identities = 92/259 (35%), Positives = 141/259 (53%), Gaps = 18/259 (6%)
Query: 3 IDTHCHLDHKDYEN---DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
+D+HCHLD DYE+ D+++VL ++ + V C+ + ++ + + V F+
Sbjct: 4 VDSHCHLDGLDYESLHKDVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVFS 63
Query: 60 IGAHPYDV-ESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
G HP + + +D + + VA+GE GLDYY PE K +Q+E F I
Sbjct: 64 CGVHPLNQNDPYDVEDLRRLAAEEGVVALGETGLDYYYTPET------KVRQQESFIHHI 117
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKN--YPKAFGVLHCFNAD----GMLLELSDRFYYG 172
+ + NKP+I+H R+A D+L +L+ GVLHCF D G LL+L FY
Sbjct: 118 QIGRELNKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLG--FYIS 175
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
G+ TF+NA++L + +P +RLL+ETDSPYL P P RG N P + +A+ +A +
Sbjct: 176 FSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLK 235
Query: 233 NIETEELASLSTHNAQMLF 251
+ EELA ++T N LF
Sbjct: 236 GVAVEELAQVTTDNFARLF 254
>ref|NP_251649.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||B83275 conserved hypothetical protein PA2959 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG06347.1|AE004722_3 (AE004722) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 258
Score = 154 bits (390), Expect = 7e-37
Identities = 96/261 (36%), Positives = 139/261 (52%), Gaps = 17/261 (6%)
Query: 1 MFIDTHCHLDHKD---YENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVF 57
M +D+HCHLD D + L+ L + +GV Q + G + ++E++ V
Sbjct: 1 MLVDSHCHLDRLDLAAHGGSLDAALDAARARGVGQFLCIGVSADNAQAVKALAERYADVH 60
Query: 58 FAIGAHPYDVESFDESLFEKFVG---HQKCVAIGECGLDYYRLPELNERENYKSKQKEIF 114
++G HP D+E + +G H + VAIGE GLDY+ PE E Q+E F
Sbjct: 61 CSVGVHPLDLEPGSAPALDWLLGELAHPRVVAIGETGLDYHYEPEAAEL------QQEAF 114
Query: 115 TKQIEFSIQHNKPLIIHIREASFDSLNLLKN--YPKAFGVLHCFNADGMLLE--LSDRFY 170
+E + KP+I+H REA D+L LL+ P+A GVLHCF D + L FY
Sbjct: 115 RLHLEAARITAKPVIVHTREARADTLALLREAALPQA-GVLHCFTEDWEMARSALDLGFY 173
Query: 171 YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
+ G+ TF+NA L E+ ++P +RLL+ETDSPYL P P RG N P Y+ +A+ +A
Sbjct: 174 ISLSGIVTFRNADALREVARQVPADRLLVETDSPYLAPIPHRGKPNLPEYVRDVAEFLAT 233
Query: 231 IINIETEELASLSTHNAQMLF 251
+ + E LA +T N LF
Sbjct: 234 LRGVSLETLAEQTTANFHRLF 254
>ref|NP_519908.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD15489.1| (AL646066) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 267
Score = 154 bits (389), Expect = 9e-37
Identities = 95/266 (35%), Positives = 138/266 (51%), Gaps = 17/266 (6%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
MF+D+HCH++ D L E+L E VT + ++D +EI+E+ ++ +
Sbjct: 1 MFVDSHCHINFPDLRARLPELLAHMRENRVTHALCISVTLEDFPSVLEIAEQEPNIYATV 60
Query: 61 GAHPYDVES-------FDESLFEKFVG---HQKCVAIGECGLDYYRLPELNERENYKSKQ 110
G HP D E+ +E E+ + H + V IGE GLDYYRL + + Q
Sbjct: 61 GVHP-DAEADLEEGTRIEEPTLERLLALADHPRVVGIGETGLDYYRLNGRSVAD--MEWQ 117
Query: 111 KEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNY--PKAFGVLHCFNA--DGMLLELS 166
+E F I S Q KPL+IH R A+ D+L +++ A GV+HCF D L
Sbjct: 118 RERFRTHIRASRQTGKPLVIHTRSAADDTLAIMREEGAEAARGVMHCFTETWDVAKAALD 177
Query: 167 DRFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQ 226
FY G+ TFK+A L E K+P +R+L+ETDSPYL P PFRG N P Y+ + +
Sbjct: 178 LGFYISFSGIVTFKSAADLQETARKVPLDRMLIETDSPYLAPVPFRGKTNEPAYVRHVGE 237
Query: 227 KIAEIINIETEELASLSTHNAQMLFS 252
+A + E +AS +T N LF+
Sbjct: 238 CLATLRGEPLEHIASATTENFFRLFN 263
>ref|NP_360682.1| (NC_003103) unknown [Rickettsia conorii]
gb|AAL03583.1| (AE008656) unknown [Rickettsia conorii]
Length = 306
Score = 154 bits (388), Expect = 1e-36
Identities = 100/303 (33%), Positives = 153/303 (50%), Gaps = 58/303 (19%)
Query: 1 MFIDTHCHLD------HKDYEND---------LEEVLKESLEKGVTQCVIPGADMKDLNR 45
M ID+HCHL+ +D + L+ +++ +LE V ++DL
Sbjct: 1 MLIDSHCHLNLRSNLSFRDVDTVVKPWYDAVFLDSIIQRALENNVQYMQTICTKIEDLPI 60
Query: 46 AIEISEKFEGVFFAIGAHPYDVESF---------------------------DESLFEKF 78
+EI+EK+ VF ++G HP +V SF S E
Sbjct: 61 ILEIAEKYANVFASVGVHPCEVNSFISHCEALQVLWQSQEAWTRLLRQDYVFPNSYAEAI 120
Query: 79 V---GHQKCVAIGECGLDYYRLPELNERENYKSK-QKEIFTKQIEFSIQHNKPLIIHIRE 134
+ H K + IGE GLDYY P Y K QK++F I + P+I+H RE
Sbjct: 121 IMLTQHPKIIGIGETGLDYYHQP-------YDQKLQKDLFVAHIHAASSTRLPVIVHTRE 173
Query: 135 ASFDSLNLLKNYPKAF---GVLHCFNADGMLLE--LSDRFYYGIGGVSTFKNAKRLVEIL 189
A D++++L + + G++HCF + L L Y + G+ TFKNA L EI+
Sbjct: 174 ADEDTIDILTSEMRNSTFPGLIHCFTSSKNLAAKMLDIGLYISMSGIITFKNATDLQEIV 233
Query: 190 PKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQM 249
IP +RLL+ETD+PYL P P RG +N P ++ +A+K+AE+ NI ++E+A+++THN +
Sbjct: 234 KYIPLDRLLIETDTPYLAPTPMRGKQNEPAFVRYVAEKVAELKNITSKEVANVTTHNFKT 293
Query: 250 LFS 252
LFS
Sbjct: 294 LFS 296
>ref|NP_228476.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||H72349 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35749.1|AE001739_12 (AE001739) conserved hypothetical protein [Thermotoga maritima]
Length = 256
Score = 153 bits (386), Expect = 2e-36
Identities = 81/258 (31%), Positives = 147/258 (56%), Gaps = 17/258 (6%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
+DTH HL +++D V+ E + V G +++D +++++S+ + +F ++G
Sbjct: 2 VDTHAHLHFHQFDDDRNAVISSFEENNIEFVVNVGVNLEDSKKSLDLSKTSDRIFCSVGV 61
Query: 63 HPYDVESFDESLFE---KFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIE 119
HP+D + E E KF +K VAIGE GLD++R ++ E QK +F +QIE
Sbjct: 62 HPHDAKEVPEDFIEHLEKFAKDEKVVAIGETGLDFFR--NISPAE----VQKRVFVEQIE 115
Query: 120 FSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFNAD----GMLLELSDRFYYGI 173
+ + N PL++HIR+A ++ +L+ + P+ GV+H F++D ++L F GI
Sbjct: 116 LAGKLNLPLVVHIRDAYSEAYEILRTESLPEKRGVIHAFSSDYEWAKKFIDLG--FLLGI 173
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
GG T+ + L E++ ++ ++LETD P+L P PFRG RN P Y+ + + I++++
Sbjct: 174 GGPVTYPKNEALREVVKRVGLEYIVLETDCPFLPPQPFRGKRNEPKYLKYVVETISQVLG 233
Query: 234 IETEELASLSTHNAQMLF 251
+ ++ +T NA+ +F
Sbjct: 234 VPEAKVDEATTENARRIF 251
>ref|NP_455695.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD08326.1| (AL627269) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 265
Score = 152 bits (385), Expect = 3e-36
Identities = 91/259 (35%), Positives = 138/259 (53%), Gaps = 18/259 (6%)
Query: 3 IDTHCHLDHKDYEN---DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
+D+HCHLD DY++ D+++VL ++ + V C+ + E+ K + V F+
Sbjct: 4 VDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVATTLPGYRHMRELVGKRDNVVFS 63
Query: 60 IGAHPYDV-ESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
G HP + E +D VA+GE GLDY+ PE K +Q+ F I
Sbjct: 64 CGVHPLNQDEVYDVEELRLLAAEDDVVAMGETGLDYFYTPET------KIRQQASFIHHI 117
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKN--YPKAFGVLHCFNAD----GMLLELSDRFYYG 172
+ + +KP+I+H R+A D+L +L+ GVLHCF D G LL+L FY
Sbjct: 118 QIGRELHKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLG--FYIS 175
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
G+ TF+NA++L + +P +RLL+ETDSPYL P P RG N P + +A+ +A +
Sbjct: 176 FSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLK 235
Query: 233 NIETEELASLSTHNAQMLF 251
+ EELA ++T N LF
Sbjct: 236 GVAVEELAQITTDNFARLF 254
>ref|NP_460172.1| (NC_003197) putative metal-dependent hydrolase [Salmonella
typhimurium LT2]
gb|AAL20131.1| (AE008752) putative metal-dependent hydrolase [Salmonella
typhimurium LT2]
Length = 265
Score = 152 bits (384), Expect = 3e-36
Identities = 90/259 (34%), Positives = 139/259 (52%), Gaps = 18/259 (6%)
Query: 3 IDTHCHLDHKDYEN---DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
+D+HCHLD DY++ D+++VL ++ + V C+ + ++ K + V F+
Sbjct: 4 VDSHCHLDGLDYQSLHKDVDDVLAKAAARDVKFCLAVATTLPGYRHMRKLVGKRDNVVFS 63
Query: 60 IGAHPYDV-ESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
G HP + E++D VA+GE GLDY+ PE K +Q+ F I
Sbjct: 64 CGVHPLNQDEAYDVEELRLLAAEDDVVAMGETGLDYFYTPET------KIRQQASFIHHI 117
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKN--YPKAFGVLHCFNAD----GMLLELSDRFYYG 172
+ + +KP+I+H R+A D+L +L+ GVLHCF D G LL+L FY
Sbjct: 118 QIGRELHKPVIVHTRDARADTLAILREEKVTDCGGVLHCFTEDRETAGKLLDLG--FYIS 175
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
G+ TF+NA++L + +P +RLL+ETDSPYL P P RG N P + +A+ +A +
Sbjct: 176 FSGIVTFRNAEQLRDAARYVPLDRLLVETDSPYLAPVPHRGKENQPAMVRDVAEYMAVLK 235
Query: 233 NIETEELASLSTHNAQMLF 251
+ EELA ++T N LF
Sbjct: 236 GVAVEELAQITTDNFARLF 254
>ref|NP_214412.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
pir||G70476 conserved hypothetical protein aq_2060 - Aquifex aeolicus
gb|AAC07810.1| (AE000770) hypothetical protein [Aquifex aeolicus]
Length = 454
Score = 151 bits (381), Expect = 7e-36
Identities = 93/261 (35%), Positives = 146/261 (55%), Gaps = 23/261 (8%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
IDTHCHLD E+ E E LE + G D K + AIE ++ ++ V+ AIG
Sbjct: 2 IDTHCHLDLLKKEDREEAFKDERLE----YLINVGFDRKTIKNAIEFAKNYDKVYIAIGF 57
Query: 63 HPYDVESFDES----LFEKFVGHQKCVAIGECGLDYYRLPELNERENY--KSKQKEIFTK 116
HP++ + + L + + K AIGE GLD+Y+ NY K KQ+EIF K
Sbjct: 58 HPHEADKVTDKDLDWLKKLAEENPKVRAIGEIGLDFYK--------NYSDKKKQEEIFRK 109
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYP--KAFGVLHCFNA--DGMLLELSDRFYYG 172
QI+ + + P++IH+R+A +++ +L+ + GV+HCF + M + F+
Sbjct: 110 QIQIAKELGLPVVIHMRDAEEETIRILREEGAYEVGGVMHCFTGSYETMKKAVDMGFFIS 169
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
G+ T+KNA+ + E+ + P +R+LLETDSP+L P P RG N PT I AQ +AE++
Sbjct: 170 YSGILTYKNAESVREVAKRTPTSRILLETDSPFLAPEPVRGKPNKPTNIFYTAQVLAELL 229
Query: 233 -NIETEELASLSTHNAQMLFS 252
N E++ ++T NA++ F+
Sbjct: 230 PNTSLEDVDRMTTQNAKLAFN 250
>ref|NP_539903.1| (NC_003317) SEC-INDEPENDENT PROTEIN TATD [Brucella melitensis]
gb|AAL52167.1| (AE009539) SEC-INDEPENDENT PROTEIN TATD [Brucella melitensis]
Length = 265
Score = 150 bits (380), Expect = 1e-35
Identities = 88/262 (33%), Positives = 145/262 (54%), Gaps = 18/262 (6%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M +D+HCHLD D+E + + V++ +L+ G+ + V ++ + ++E +E V+ ++
Sbjct: 3 MLVDSHCHLDFADFEPERDAVVQRALDAGIKRMVTISTRVRKFDAIRTLAETYEAVYCSV 62
Query: 61 GAHPYDV-ESFDESLFE--KFVGHQKCVAIGECGLDYYRLPELNERENY--KSKQKEIFT 115
G HP + E D + + + H K VAIGE GLDY+ +Y K Q++ F
Sbjct: 63 GTHPNNAHEELDITADDLVRLAEHPKVVAIGEAGLDYHY--------DYAPKEAQQQGFL 114
Query: 116 KQIEFSIQHNKPLIIHIREASFDSLNLLKNYPK--AFG-VLHCFNADGMLLELSDRF--Y 170
I+ + + PL+IH R A D +L+ + AF +LHCF++ L E Y
Sbjct: 115 AHIDAARRTQLPLVIHARSADIDMAEILEKETEKGAFPFILHCFSSGRALAEKGIELGGY 174
Query: 171 YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
G+ TFKN+ + E+ +P++RLL+ETD+PYL P P RG RN P+++ A +AE
Sbjct: 175 ISFSGILTFKNSADIREVASIVPRDRLLVETDAPYLAPVPHRGKRNEPSFVQHTAAVLAE 234
Query: 231 IINIETEELASLSTHNAQMLFS 252
I + EE+A++++ N LFS
Sbjct: 235 TIGVSPEEIAAITSDNVFRLFS 256
>ref|NP_240173.1| (NC_002528) hypothetical protein [Buchnera sp. APS]
sp|P57436|Y355_BUCAI Putative deoxyribonuclease BU355
dbj|BAB13059.1| (AP001119) hypothetical protein [Buchnera sp. APS]
Length = 264
Score = 149 bits (376), Expect = 3e-35
Identities = 91/269 (33%), Positives = 146/269 (53%), Gaps = 28/269 (10%)
Query: 3 IDTHCHLDHKDYE---NDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
ID+HCHLD +Y ++E+VLK+S + V + + + ++ +K+ +F++
Sbjct: 4 IDSHCHLDRLNYNLPLENIEDVLKKSYQNHVKNFLTVSTCISNFYNIKKLFKKYNTIFYS 63
Query: 60 IGAHP----------YDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSK 109
G HP + +E+ + +K + +A+GE GLDYY + K
Sbjct: 64 CGVHPLNCKKELNLFHTIENLSNEI-KKLSCIKDVIALGETGLDYYYSSDT------KKI 116
Query: 110 QKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFNADG----MLL 163
Q++ F + I +I+ KP+I+H R AS D++ +L+ N K GVLH F D LL
Sbjct: 117 QQDFFREHIRVAIKLKKPIIVHSRNASEDTIKILQEENAEKCKGVLHSFTGDYNTACKLL 176
Query: 164 ELSDRFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPL 223
+L FY G+ TFKN+ L + + KIP NRLL+ETDSPYL+P P+RG N P Y+
Sbjct: 177 DLG--FYISCSGIITFKNSLELCKTIRKIPLNRLLIETDSPYLSPAPYRGKGNQPAYLFY 234
Query: 224 IAQKIAEIINIETEELASLSTHNAQMLFS 252
IA+ ++ + I+ L ++T N + LF+
Sbjct: 235 IAEYLSILKEIDIHALGHITTSNFRTLFN 263
>ref|NP_385706.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC46179.1| (AL591787) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 259
Score = 148 bits (374), Expect = 5e-35
Identities = 86/261 (32%), Positives = 141/261 (53%), Gaps = 16/261 (6%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M IDTHCHLD D+E + + +++ + + GV Q V +K + + I+E++ VF ++
Sbjct: 1 MLIDTHCHLDFPDFEAERDAIIERARDAGVGQMVTISTRVKRFDTILAIAERYPNVFCSV 60
Query: 61 GAHPYDVESFDESLFEKFV---GHQKCVAIGECGLDYYRLPELNERENYKSKQKEI-FTK 116
G HP++ + + + V H K VAIGE GLDY+ +N + + +
Sbjct: 61 GTHPHNADEELDVTADDLVRLSAHPKVVAIGEAGLDYFY-------DNAPRDAQAVGLRR 113
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLL--KNYPKAFG-VLHCFNADGMLLELSDRF--YY 171
I + PL+IH R A D +L ++ AF +LHCF++ L + Y
Sbjct: 114 HIAAARTTGLPLVIHSRSADDDMAAILTEESGKGAFPFLLHCFSSGPDLARIGVELGGYV 173
Query: 172 GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEI 231
G+ TF ++ L +I +P++R+++ETD+PYL P PFRG RN P Y+ A+ +A+
Sbjct: 174 SFSGILTFPKSEELRDIARTVPRDRMIVETDAPYLAPKPFRGKRNEPAYVAHTAEVLAQA 233
Query: 232 INIETEELASLSTHNAQMLFS 252
I + EE+A ++T NA +FS
Sbjct: 234 IGVSREEIAEITTENAFRIFS 254
>ref|NP_532185.1| (NC_003304) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAL42501.1| (AE009108) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 260
Score = 147 bits (371), Expect = 1e-34
Identities = 91/262 (34%), Positives = 141/262 (53%), Gaps = 17/262 (6%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M IDTHCHLD D+E + ++++ + GV+Q V ++ L ++I++K+ VF ++
Sbjct: 1 MLIDTHCHLDFPDFEAERDDIIARAHASGVSQMVTISTRVRRLPELLKIADKYPSVFCSV 60
Query: 61 GAHPYDVE-----SFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFT 115
G HP + + S DE L H K VAIGE GLDY+ + E QK
Sbjct: 61 GTHPNNADEELDISADE-LVRLAESHDKIVAIGEAGLDYFYDTQKPE------DQKTGLI 113
Query: 116 KQIEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFG-VLHCFNADGMLLELSDRF--Y 170
+ IE + + PL+IH R A D +L+ + AF +LHCF+A L + Y
Sbjct: 114 RHIEAARRTKLPLVIHSRSADDDMAAILRAESGKGAFPFILHCFSAGPELAKAGVELGGY 173
Query: 171 YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
G+ TF ++ + +I +P +RLL+ETD+PYL P +RG RN P+Y+ A+ +AE
Sbjct: 174 VSFSGILTFPKSQDIRDIAATVPLDRLLVETDAPYLAPKRWRGKRNEPSYVVNTAEVLAE 233
Query: 231 IINIETEELASLSTHNAQMLFS 252
+ + E +A ++T NA FS
Sbjct: 234 VHGVSFEHMAEITTENAFRCFS 255
>ref|NP_354501.1| (NC_003062) AGR_C_2756p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK87286.1| (AE008073) AGR_C_2756p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 269
Score = 147 bits (371), Expect = 1e-34
Identities = 91/262 (34%), Positives = 141/262 (53%), Gaps = 17/262 (6%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M IDTHCHLD D+E + ++++ + GV+Q V ++ L ++I++K+ VF ++
Sbjct: 10 MLIDTHCHLDFPDFEAERDDIIARAHASGVSQMVTISTRVRRLPELLKIADKYPSVFCSV 69
Query: 61 GAHPYDVE-----SFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFT 115
G HP + + S DE L H K VAIGE GLDY+ + E QK
Sbjct: 70 GTHPNNADEELDISADE-LVRLAESHDKIVAIGEAGLDYFYDTQKPE------DQKTGLI 122
Query: 116 KQIEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFG-VLHCFNADGMLLELSDRF--Y 170
+ IE + + PL+IH R A D +L+ + AF +LHCF+A L + Y
Sbjct: 123 RHIEAARRTKLPLVIHSRSADDDMAAILRAESGKGAFPFILHCFSAGPELAKAGVELGGY 182
Query: 171 YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
G+ TF ++ + +I +P +RLL+ETD+PYL P +RG RN P+Y+ A+ +AE
Sbjct: 183 VSFSGILTFPKSQDIRDIAATVPLDRLLVETDAPYLAPKRWRGKRNEPSYVVNTAEVLAE 242
Query: 231 IINIETEELASLSTHNAQMLFS 252
+ + E +A ++T NA FS
Sbjct: 243 VHGVSFEHMAEITTENAFRCFS 264
>ref|NP_273813.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||H81159 conserved hypothetical protein NMB0771 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41184.1| (AE002431) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 259
Score = 146 bits (369), Expect = 2e-34
Identities = 89/253 (35%), Positives = 133/253 (52%), Gaps = 10/253 (3%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
ID+HCHL+ + + L EVL GV Q + + + I+E E ++ IG
Sbjct: 4 IDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESFSEVFAIAEAHEHIYCTIGV 63
Query: 63 HPYDVESFDESLFE--KFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
HP E+ + S+ E + H K V IGE GLDYY + S Q + F IE
Sbjct: 64 HPDSKEAEEFSIAEMVEAAAHPKVVGIGETGLDYYWC------KGDLSWQHKRFADHIEA 117
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNAD-GMLLELSDR-FYYGIGGVST 178
+ Q P+I+H R+A+ D+L++LK GV+HCF+ D G D Y G+ T
Sbjct: 118 ANQTGLPVIVHTRDAAADTLSILKECRVNSGVIHCFSEDIGFARAAMDLGLYISFSGIVT 177
Query: 179 FKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEE 238
FKNA + E +P +R+L+ETD+P+L P P RG +N P ++ A+ IA++ N E+
Sbjct: 178 FKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPAFVRHTAEHIAKLRNQTLEQ 237
Query: 239 LASLSTHNAQMLF 251
+A+ +T N LF
Sbjct: 238 VAAYTTENFYRLF 250
>ref|NP_268614.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
gb|AAK33335.1| (AE006492) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
Length = 274
Score = 146 bits (368), Expect = 2e-34
Identities = 85/259 (32%), Positives = 142/259 (54%), Gaps = 21/259 (8%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
DTH HL+ +++ E L + E GV + G D ++ A+ ++ K+ ++ IG H
Sbjct: 23 DTHTHLNVAEFQGHETEELTLAQEMGVAYHNVVGFDQATISGALTLANKYANIYATIGWH 82
Query: 64 PYDVESFDESLFEKFVG---HQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P + S+ E++ E V H K +A+GE GLDYY + E+ K Q E+F +Q++
Sbjct: 83 PTEAGSYSEAVEEAIVSQLSHSKVIALGEIGLDYYWM------EDPKEVQIEVFKRQMQL 136
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNY---PKAFGVLHCFNADGMLLELSDRFY-----YG 172
+ H+ P ++H R+A D+ ++K P+ G++H ++ LE+++RF
Sbjct: 137 AKDHDLPFVVHTRDALEDTYEVIKAAGVGPRG-GIMHSYSGS---LEMAERFIELGMMIS 192
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
GV TFK A + E +P +++L+ETD+PYLTP P RG +N Y + KIAE+
Sbjct: 193 FSGVVTFKKALDIQEAAQHLPLDKILVETDAPYLTPVPKRGKQNHTAYTRYVVDKIAELR 252
Query: 233 NIETEELASLSTHNAQMLF 251
+ EE+A +T NA+ +F
Sbjct: 253 GMTVEEVAKATTANAKRVF 271
>ref|NP_102218.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB48004.1| (AP002994) hypothetical protein [Mesorhizobium loti]
Length = 264
Score = 145 bits (367), Expect = 3e-34
Identities = 89/261 (34%), Positives = 137/261 (52%), Gaps = 18/261 (6%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M +D+HCHLD D+ + ++ + G+ + V +K + +EI+E F+ V+ ++
Sbjct: 1 MLVDSHCHLDFPDFAEERAAIVARAKAAGIGRMVTISTRVKRFPQMLEIAETFDEVYCSV 60
Query: 61 GAHPYDV-ESFDESLFE--KFVGHQKCVAIGECGLDYY--RLPELNERENYKSKQKEIFT 115
G HP++ E D + E + H K VAIGE GLDY+ + P + Q F
Sbjct: 61 GTHPHNAAEELDVTTAELVRLSAHPKVVAIGEAGLDYFYDKAP--------RDAQALGFR 112
Query: 116 KQIEFSIQHNKPLIIHIREASFDSLNLLKNYPK--AFG-VLHCFNADGMLLELSDRF--Y 170
I + PL+IH R+A D +L++ AF +LHCF++ L E+ Y
Sbjct: 113 NHIAAARATGLPLVIHSRDADDDMAAILEDETGKGAFPFILHCFSSGRRLAEVGVSLGGY 172
Query: 171 YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
G+ TFKN+ L + +P +RLL+ETD+PYL P PFRG RN P Y+ A+ +AE
Sbjct: 173 VSFSGILTFKNSAELRAVAADVPHDRLLVETDAPYLAPIPFRGKRNEPAYVAHTAKVLAE 232
Query: 231 IINIETEELASLSTHNAQMLF 251
+ + E+A L+T N LF
Sbjct: 233 TVGVSEAEIADLTTSNFFRLF 253
>ref|NP_283761.1| (NC_003116) hypothetical protein NMA0982 [Neisseria meningitidis
Z2491]
pir||E81945 hypothetical protein NMA0982 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84252.1| (AL162754) hypothetical protein NMA0982 [Neisseria meningitidis
Z2491]
Length = 259
Score = 145 bits (365), Expect = 5e-34
Identities = 86/253 (33%), Positives = 131/253 (50%), Gaps = 10/253 (3%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
ID+HCHL+ + + L EVL GV Q + + + ++E E ++ IG
Sbjct: 4 IDSHCHLNFEGLKERLPEVLSNMEANGVGQALAISVSRESFSEVFAVAEAHEHIYCTIGV 63
Query: 63 HPYDVESFDESLFE--KFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
HP E+ + S+ E + H K V IGE GLDYY + S Q + F IE
Sbjct: 64 HPDSREAEEFSIAEMVEAAAHPKVVGIGETGLDYYWC------KGDLSWQHKRFADHIEA 117
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLE--LSDRFYYGIGGVST 178
+ Q P+I+H R+A+ D+L +LK GV+HCF+ D + Y G+ T
Sbjct: 118 ANQTGLPVIVHTRDAAADTLAILKECKTNSGVIHCFSEDTAFARAAMDLGLYISFSGIVT 177
Query: 179 FKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEE 238
FKNA + E +P +R+L+ETD+P+L P P RG +N P ++ A+ IA++ N E+
Sbjct: 178 FKNAPLVQEAAKYVPDDRILVETDAPFLAPVPKRGRQNEPAFVRHTAEHIAKLRNQTLEQ 237
Query: 239 LASLSTHNAQMLF 251
+A+ +T N LF
Sbjct: 238 VAAYTTENFYRLF 250
>ref|NP_266843.1| (NC_002662) conserved hypothetical protein [Lactococcus lactis
subsp. lactis]
gb|AAK04785.1|AE006302_3 (AE006302) conserved hypothetical protein [Lactococcus lactis
subsp. lactis]
Length = 257
Score = 144 bits (362), Expect = 1e-33
Identities = 85/255 (33%), Positives = 139/255 (54%), Gaps = 13/255 (5%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
DTH HL+ ++E +++ L ++ GVT+ G++ + + A+ ++EKFE + IG H
Sbjct: 5 DTHTHLNTSEFEGRIQDELVQAQTFGVTRINNVGSNYESNDAALLLAEKFEECYATIGWH 64
Query: 64 PYDVESFD---ESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P D FD E+ + +K +A+GE GLDY+ + E +Q+ +F +QI+
Sbjct: 65 PDDAAEFDDQAENYLLTKLSAKKVIALGEIGLDYHWMVRPKE------EQERVFRRQIQI 118
Query: 121 SIQHNKPLIIHIREASFDSLNLLKN--YPKAFGVLHCFN--ADGMLLELSDRFYYGIGGV 176
S + P +H R+A D+ ++K+ A ++H F+ AD L + GV
Sbjct: 119 SKEMGLPFQVHTRDALDDTYEIIKSEGVGPAGAIMHSFSGTADEALKFVELGMMISFSGV 178
Query: 177 STFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIET 236
TFK A + E +P +++L+ETD+PYLTP P+RG N P Y I +KIAE+ I
Sbjct: 179 VTFKKALDVQEAAATVPLDKILVETDAPYLTPMPYRGKENRPAYTKFIVEKIAELREISA 238
Query: 237 EELASLSTHNAQMLF 251
+E+A +T NA +F
Sbjct: 239 DEVAKATTENALRIF 253
>ref|NP_606528.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
gb|AAL97027.1| (AE009972) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 274
Score = 143 bits (360), Expect = 2e-33
Identities = 84/259 (32%), Positives = 143/259 (54%), Gaps = 21/259 (8%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
DTH HL+ +++ E L + E GV + G D ++ A+ +++++ V+ IG H
Sbjct: 23 DTHTHLNVAEFQGHEAEELALAQEMGVAYHNVVGFDQATISGALALADQYPHVYATIGWH 82
Query: 64 PYDVESFDESLFEKFVG---HQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P + S+ E++ E V H K +A+GE GLDY+ + E+ K Q E+F +Q++
Sbjct: 83 PTEAGSYSEAVEESIVSQLSHPKVIALGEIGLDYHWM------EDPKELQIEVFKRQMQL 136
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNY---PKAFGVLHCFNADGMLLELSDRFY-----YG 172
+ H+ P ++H R+A D+ ++K P+ G++H ++ LE+++RF
Sbjct: 137 AKDHDLPFVVHTRDALEDTYEVIKAAGVGPRG-GIMHSYSGS---LEMAERFIELGMMIS 192
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
GV TFK A + E +P +++L+ETD+PYLTP P RG +N Y + KIAE+
Sbjct: 193 FSGVVTFKKALDIQEAAQHLPLDKILVETDAPYLTPVPKRGKQNHTAYTRYVVDKIAELR 252
Query: 233 NIETEELASLSTHNAQMLF 251
+ EE+A +T NA+ +F
Sbjct: 253 GMTVEEVAKATTANAKRVF 271
>ref|NP_325845.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis]
emb|CAC13187.1| (AL445563) conserved hypothetical protein [Mycoplasma pulmonis]
Length = 252
Score = 140 bits (353), Expect = 1e-32
Identities = 81/254 (31%), Positives = 134/254 (51%), Gaps = 10/254 (3%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIG 61
+ID H H K+Y ++ E+ ++ +G+ + D K++++ I+ SEK++ +F +G
Sbjct: 3 YIDLHTH-PFKEYYDEPEKEIESWYSQGIKKLFFVSCDYKEMDQVIKASEKYDYIFPVLG 61
Query: 62 AHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFS 121
HP + + ++ VAIGE GLDY+ + + + Q E F Q++ +
Sbjct: 62 THPSSAAGKKDGEYLAKKITKRTVAIGEIGLDYH-----HPKNPPRKVQIESFISQLDVA 116
Query: 122 IQHNKPLIIHIREASFDSLNLLKN--YPKAFGVLHCF--NADGMLLELSDRFYYGIGGVS 177
++HN P+IIH RE D +L N Y + H F N D L+ FY GV
Sbjct: 117 LKHNLPVIIHCRETFDDIYEILSNPKYENMQIIFHTFSGNRDWAQKLLNKNFYLSFSGVL 176
Query: 178 TFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETE 237
TFKNA+ E+L P ++ ETDSPYL P P+RG +N TY+ + + +EI+NI+ +
Sbjct: 177 TFKNAQETREVLKITPLEKIFFETDSPYLAPVPYRGKQNKSTYVKEVYKLASEILNIDEQ 236
Query: 238 ELASLSTHNAQMLF 251
+L + N + +F
Sbjct: 237 KLIAQVEQNVKKVF 250
>ref|NP_346418.1| (NC_003028) hydrolase, putative [Streptococcus pneumoniae TIGR4]
ref|NP_359397.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAK76058.1| (AE007488) hydrolase, putative [Streptococcus pneumoniae TIGR4]
gb|AAL00608.1| (AE008544) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 257
Score = 140 bits (353), Expect = 1e-32
Identities = 87/263 (33%), Positives = 143/263 (54%), Gaps = 23/263 (8%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M DTH HL+ +++ E + + E GVTQ I G D + A+E+ +++E ++ I
Sbjct: 1 MIFDTHTHLNVEEFAGREAEEIALAAEMGVTQMNIVGFDKPTIEHALELVDEYEQLYATI 60
Query: 61 GAHPYDVESFDES----LFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
G HP + ++ E L +K + H K VA+GE GLDY+ + E Q+++F +
Sbjct: 61 GWHPTEAGTYTEEVEAYLLDK-LKHSKVVALGEIGLDYHWMTAPKE------VQEQVFRR 113
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNY---PKAFGVLHCFNADGMLLELSDRFY--- 170
QI+ S + P ++H R+A D+ ++K+ P+ G++H F+ LE +++F
Sbjct: 114 QIQLSKDLDLPFVVHTRDALEDTYEIIKSEGVGPRG-GIMHSFSGT---LEWAEKFVDLG 169
Query: 171 --YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKI 228
GV TFK A L E ++P +++L+ETD+PYL P P RG N Y + I
Sbjct: 170 MTISFSGVVTFKKATDLQEAAKELPLDKMLVETDAPYLAPVPKRGRENKTAYTRYVVDFI 229
Query: 229 AEIINIETEELASLSTHNAQMLF 251
A++ + TEELA +T NA+ +F
Sbjct: 230 ADLRGMTTEELAVATTANAERIF 252
>ref|NP_440686.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|P73335|YH86_SYNY3 Putative deoxyribonuclease sll1786
pir||S77519 hypothetical protein sll1786 - Synechocystis sp. (strain PCC 6803)
dbj|BAA17366.1| (D90905) ORF_ID:sll1786~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 261
Score = 139 bits (351), Expect = 2e-32
Identities = 81/262 (30%), Positives = 137/262 (51%), Gaps = 17/262 (6%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
+DTH H++ + DL+++ + GV Q V ++ ++ ++++F +FFA+G
Sbjct: 4 VDTHVHINFDVFAADLDQLQHRWRQAGVVQLVHSCVKPQEFDQIQSLADRFPELFFAVGL 63
Query: 63 HPYDVESFDESLFEKFVGHQKC----VAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
HP D E + ++ + + + K VAIGE GLD+++ + Q E+F Q+
Sbjct: 64 HPLDAEDWQDNTAGQILAYAKADDRVVAIGEMGLDFFKADN-------RDHQIEVFRAQL 116
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNYPK----AFGVLHCFNADGMLLE--LSDRFYYG 172
+ + NKP+IIH R+A+ +L ++ GV+HC+ + L FY
Sbjct: 117 AIARELNKPVIIHCRDAAQTMRQVLTDFQAESGPVAGVMHCWGGTPEETQWFLDLGFYIS 176
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
G TFK A+ + +P +RLL+ETD P+L P P RG RN P ++ +A+ IA +
Sbjct: 177 FSGTVTFKKAEGIQASAQMVPPDRLLVETDCPFLAPVPQRGKRNEPAFVRHVAEAIAALR 236
Query: 233 NIETEELASLSTHNAQMLFSFP 254
++ E LA +T NA+ LF P
Sbjct: 237 HVPLETLAQQTTTNARNLFKLP 258
>ref|NP_405188.1| (NC_003143) putative deoxyribonuclease [Yersinia pestis]
emb|CAC90429.1| (AJ414149) putative deoxyribonuclease [Yersinia pestis]
Length = 269
Score = 137 bits (345), Expect = 1e-31
Identities = 84/261 (32%), Positives = 138/261 (52%), Gaps = 18/261 (6%)
Query: 1 MFIDTHCHLDHKDYE---NDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVF 57
+ +D+HCHLD DY+ + +++VL ++ + V + + + + + V
Sbjct: 2 LLVDSHCHLDSLDYQTLHSSVDDVLAKANARDVGFILAVATTLPGFTAMTALIGERKNVA 61
Query: 58 FAIGAHPYDVES-FDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
F+ G HP +++ +D + VA+GE GLDY+ +++N +Q F +
Sbjct: 62 FSCGVHPLNLDGGYDFQQLRELAAGTHVVAMGETGLDYFY-----QQDNIPLQQAS-FRE 115
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYPK--AFGVLHCFNAD----GMLLELSDRFY 170
I + NKP+I+H R+A D+L++L+ GVLHCF D LL+L FY
Sbjct: 116 HIRIGRELNKPVIVHTRDAREDTLSILREEQAQDCGGVLHCFTEDKATAATLLDLG--FY 173
Query: 171 YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
G+ TF+NA++L ++ +P +RLL+ETDSPYL P P RG N P Y+ +A+ +A
Sbjct: 174 ISFSGIVTFRNAEQLRDVARYVPLDRLLVETDSPYLAPVPHRGKENQPAYVRDVAEYMAV 233
Query: 231 IINIETEELASLSTHNAQMLF 251
+ + E LA +T N LF
Sbjct: 234 LKGVSLESLAEATTANFCRLF 254
>ref|NP_220110.1| (NC_000117) PHP superfamily hydrolase [Chlamydia trachomatis]
pir||G71494 probable php hydrolase - Chlamydia trachomatis (serotype D, strain
UW3/Cx)
gb|AAC68196.1| (AE001330) PHP superfamily hydrolase [Chlamydia trachomatis]
Length = 263
Score = 133 bits (334), Expect = 2e-30
Identities = 87/258 (33%), Positives = 129/258 (49%), Gaps = 16/258 (6%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFF--AI 60
+D H HL +++ D +V+ GVT+ V +L R+ +E + F
Sbjct: 4 VDAHVHLSSEEFIEDFGDVVLRGKTAGVTRVVNVTTTKAELLRSFAYAEAYPDWMFYHVA 63
Query: 61 GAHPYDVESFDESLFEKFVGHQ---KCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G P D + E F++F K AIGE GLDY + +E+E +QKE+ +
Sbjct: 64 GTPPQDAQDDIEEDFQEFCRAAEGGKLAAIGEVGLDYLFAVQASEQE----RQKEVLCRY 119
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNYPKAF-----GVLHCFNA--DGMLLELSDRFY 170
++ ++QH PL++H R A D ++L + + G+LHCF + L+ +Y
Sbjct: 120 LQLALQHELPLVVHCRGAFEDFFHILDHVYRVDQQAKPGMLHCFTGTYEEATELLARDWY 179
Query: 171 YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
I G+ TFKNAK L +++ KI RLL+ETD+PYL P P RG RN P I +IAE
Sbjct: 180 ISISGIVTFKNAKSLQDLVEKISLERLLVETDAPYLAPTPLRGKRNEPANIVHTLARIAE 239
Query: 231 IINIETEELASLSTHNAQ 248
I I EL + N Q
Sbjct: 240 IKGISVYELQDAVSTNVQ 257
>ref|NP_297256.1| (NC_002620) mttC protein, putative [Chlamydia muridarum]
pir||B81653 mttC protein, probable TC0883 [imported] - Chlamydia muridarum
(strain Nigg)
gb|AAF39679.1| (AE002355) mttC protein, putative [Chlamydia muridarum]
Length = 263
Score = 132 bits (333), Expect = 3e-30
Identities = 88/257 (34%), Positives = 130/257 (50%), Gaps = 16/257 (6%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFF--AIG 61
D H HL +++ D EV GVT+ V +L R+ +E++ F G
Sbjct: 5 DAHVHLSSEEFIEDFGEVCLRGKTAGVTRVVNVTTTKAELLRSFAYAEQYPSWLFYHVAG 64
Query: 62 AHPYDVESFDESLFEKFVGHQ---KCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
P D + E F++F K AIGE GLDY + +E+E +QKE+ + +
Sbjct: 65 TPPQDAQEDIEEDFQEFCRAAEGGKLAAIGEVGLDYLFAVQESEQE----RQKEVLHRYL 120
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNYPKAF-----GVLHCFNADGMLLE--LSDRFYY 171
+ ++QH PL++H R A D ++L + +A G+LHCF + L+ +Y
Sbjct: 121 QLALQHELPLVVHCRGAFEDFFHILDHAYRADKRARPGMLHCFTGTYEEAKELLARDWYI 180
Query: 172 GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEI 231
I G+ TFKNA+ L +++ +IP RLL+ETD+PYL P P RG RN P I +IAEI
Sbjct: 181 SISGIVTFKNAQGLRDLVKEIPLERLLVETDAPYLAPTPLRGKRNEPANIIYTLMQIAEI 240
Query: 232 INIETEELASLSTHNAQ 248
I EL + N Q
Sbjct: 241 KGIPLNELQEAVSANVQ 257
>ref|NP_215524.1| (NC_000962) hypothetical protein Rv1008 [Mycobacterium tuberculosis
H37Rv]
pir||C70603 hypothetical protein Rv1008 - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB08135.1| (Z94752) hypothetical protein Rv1008 [Mycobacterium tuberculosis
H37Rv]
Length = 264
Score = 130 bits (326), Expect = 2e-29
Identities = 80/259 (30%), Positives = 136/259 (51%), Gaps = 13/259 (5%)
Query: 3 IDTHCHLDH---KDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
+D H HLD +D + + +++ + GVT V D++ +E V+ A
Sbjct: 2 VDAHTHLDACGARDADT-VRSLVERAAAAGVTAVVTVADDLESARWVTRAAEWDRRVYAA 60
Query: 60 IGAHPYDVESFDESL---FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
+ HP ++ ++ E+ V H + VA+GE G+D Y L+ Q+E F
Sbjct: 61 VALHPTRADALTDAARAELERLVAHPRVVAVGETGIDMYWPGRLDGCAE-PHVQREAFAW 119
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFNADGMLLE--LSDRFYYG 172
I+ + + KPL+IH R+A D L++L+ P +LHCF++D + + +
Sbjct: 120 HIDLAKRTGKPLMIHNRQADRDVLDVLRAEGAPDTV-ILHCFSSDAAMARTCVDAGWLLS 178
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
+ G +F+ A+ L E +P +P +LL+ETD+PYLTPHP RG N P +P + +AE++
Sbjct: 179 LSGTVSFRTARELREAVPLMPVEQLLVETDAPYLTPHPHRGLANEPYCLPYTVRALAELV 238
Query: 233 NIETEELASLSTHNAQMLF 251
N EE+A ++T NA+ +
Sbjct: 239 NRRPEEVALITTSNARRAY 257
>ref|NP_229762.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||E82363 conserved hypothetical protein VC0103 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF93281.1| (AE004101) conserved hypothetical protein [Vibrio cholerae]
Length = 255
Score = 129 bits (324), Expect = 3e-29
Identities = 77/258 (29%), Positives = 149/258 (56%), Gaps = 17/258 (6%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI-G 61
IDTH H+ ++++D +EV+ + + G+ + ++P D+ + + + + + ++ G
Sbjct: 2 IDTHAHVYASEFDHDRDEVIARARQVGIEKILMPNIDLNSIAPMLATEKAYPDLCHSMMG 61
Query: 62 AHPYDVESFDE----SLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
HP V++ + +++E F H +A+GE G+D Y + +K++Q+ F Q
Sbjct: 62 LHPCYVDANVKQTLATIYEWFSRHT-FIAVGEIGIDLYW------DKTFKAEQEMAFLTQ 114
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNYP--KAFGVLHCFNAD-GMLLELSDR-FYYGI 173
+ ++ + + P++IH R++ ++L LLK + GV HCF ++D F+ GI
Sbjct: 115 LNWAKELDLPVVIHTRDSLNETLALLKQAQDGRLRGVFHCFGGSVDEAKAINDLGFHLGI 174
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
GGVSTFKN+ + +++P++ N ++LETD PYL P P RG RN P LI++K+A++ +
Sbjct: 175 GGVSTFKNSG-MDQVIPQLDLNYVILETDCPYLAPVPHRGKRNEPMLTHLISEKVAQLRS 233
Query: 234 IETEELASLSTHNAQMLF 251
+ E+ ++ +N++ LF
Sbjct: 234 LPLGEVIKITNNNSKALF 251
>ref|NP_224982.1| (NC_000922) PHP superfamily (urease/pyrimidinase) hydrolase
[Chlamydophila pneumoniae CWL029]
ref|NP_300844.1| (NC_002491) PHP superfamily (urease/pyrimidinase) hydrolase
[Chlamydophila pneumoniae J138]
ref|NP_445622.1| (NC_002179) mttC protein, putative [Chlamydophila pneumoniae AR39]
pir||A72035 php homolog (urease/pyrimidinase) hydrolase - Chlamydophila
pneumoniae (strains CWL029 and AR39)
gb|AAD18925.1| (AE001660) PHP superfamily (urease/pyrimidinase) hydrolase
[Chlamydophila pneumoniae CWL029]
gb|AAF38857.1| (AE002265) mttC protein, putative [Chlamydophila pneumoniae AR39]
dbj|BAA98995.1| (AP002547) PHP superfamily (urease/pyrimidinase) hydrolase
[Chlamydophila pneumoniae J138]
Length = 261
Score = 129 bits (324), Expect = 3e-29
Identities = 84/257 (32%), Positives = 134/257 (51%), Gaps = 21/257 (8%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI--G 61
D H HL +E D+ VL+ + + GV+ V K+LNR+ +E+F + F G
Sbjct: 5 DAHVHLSDDAFEEDINSVLQRAQDSGVSLVVNVTTTEKELNRSFAYAERFPKIRFCHVGG 64
Query: 62 AHPYDVESFDESLFEKF---VGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
P DV+ E + F +K AIGE GLDY E ++QKE+ + +
Sbjct: 65 TPPQDVDQDIEEDYRNFHAAAHSKKLAAIGEVGLDY-----CFATEEGIARQKEVLQRYL 119
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNY----PKAF-GVLHCFNADGMLLE----LSDRF 169
S++ PL++H R A D +L Y P++ G+LHCF G L E +S +
Sbjct: 120 ALSLECELPLVVHCRGAFNDFFRMLDQYYHNDPRSRPGMLHCFT--GTLEEAQELISRGW 177
Query: 170 YYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIA 229
+ I G+ TFKNA+ L +++ ++P LL+ETD+P+L P P+RG +N P ++ +A
Sbjct: 178 FISISGIVTFKNAQDLRDLVVELPLEHLLIETDAPFLAPVPYRGKKNEPAHVLHTINAVA 237
Query: 230 EIINIETEELASLSTHN 246
+ + +ELA+L+ N
Sbjct: 238 NVKGMFPQELAALAYKN 254
>ref|NP_077847.1| (NC_002162) hypothetical [Ureaplasma urealyticum]
sp|Q9PRC8|Y017_UREPA Putative deoxyribonuclease UU017
pir||E82944 hypothetical UU017 [imported] - Ureaplasma urealyticum
gb|AAF30422.1|AE002101_5 (AE002101) hypothetical [Ureaplasma urealyticum]
Length = 265
Score = 128 bits (321), Expect = 7e-29
Identities = 82/267 (30%), Positives = 138/267 (50%), Gaps = 27/267 (10%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
IDTH H + + + ++++ + E+G+ ++ G D+K AI+ ++KF+ + ++
Sbjct: 8 IDTHTHPNIEPLIEEFDDIIFKCYEQGIGLNIV-GVDLKTSQTAIQQAKKFKFLTCSVAI 66
Query: 63 HPYDVESFDESLFEKFVGHQKCVA--------IGECGLDYYRLPELNERENYKSK-QKEI 113
HP D+ + + FV +K +A IGECGLDYY +NY QK
Sbjct: 67 HPNDLHNIEND----FVALEKLIAENIDYISCIGECGLDYYH------EQNYDHDFQKHW 116
Query: 114 FTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLE--LSDRFYY 171
F K IE + +++KPL++HIR A D++ +LK ++HCF + + +Y
Sbjct: 117 FKKHIELAKKYHKPLMLHIRNAHDDAIAILKELAVQDVIIHCFTDKKEYAQQYIEMGYYI 176
Query: 172 GIGGVSTFKNAKR-----LVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQ 226
GV TFK K L E + P +++L+ETD+PYLTP P RG N P Y+ +
Sbjct: 177 SYPGVITFKPTKNNQLHELYEAIKITPLDKILVETDAPYLTPVPKRGQTNYPYYVLYTSA 236
Query: 227 KIAEIINIETEELASLSTHNAQMLFSF 253
IA ++ I E++ + N+ + +F
Sbjct: 237 FIANLLGITHEKMQKILLENSLRILNF 263
>ref|NP_600136.1| (NC_003450) COG0084:Mg-dependent DNase [Corynebacterium glutamicum]
dbj|BAB98301.1| (AP005276) Mg-dependent DNase [Corynebacterium glutamicum ATCC
13032]
Length = 277
Score = 126 bits (316), Expect = 3e-28
Identities = 84/255 (32%), Positives = 127/255 (48%), Gaps = 8/255 (3%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
ID H HL DL +++ + E GV + G + + A+E +++F VF A
Sbjct: 20 IDAHTHL--ASCGGDLAGLVERAKEAGVEKLCTVGDGLAEAELALEAAQQFGNVFAACAI 77
Query: 63 HPYDVESFD---ESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIE 119
HP + D + + CVAIGE GLD Y + E Q+E I+
Sbjct: 78 HPTKADQLDGAARARLTQMAADPNCVAIGETGLDSYWIKHDPEDTAALDVQEEALRWHID 137
Query: 120 FSIQHNKPLIIHIREASFDSLNLLKNYPKAFG-VLHCFNAD-GMLLELSDRFYY-GIGGV 176
+I +KPL+IH REA D + +L + P +LHCF++ + E DR Y G
Sbjct: 138 LAISADKPLMIHNREADADLMRVLADAPPPKDTILHCFSSPLDVAKEALDRGYVLSFAGN 197
Query: 177 STFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIET 236
TFK + L E P +++L+ETD+PY+TP PFRG+RN P+ I A IAE+ +
Sbjct: 198 VTFKRNEELREAARIAPISQILIETDAPYMTPEPFRGSRNEPSLIGHTALCIAEVRGMAV 257
Query: 237 EELASLSTHNAQMLF 251
E++A+ N ++
Sbjct: 258 EDVAAALNENFDRVY 272
>ref|NP_485633.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB77959.1| (AP003586) ORF_ID:alr1593~hypothetical protein [Nostoc sp. PCC
7120]
Length = 261
Score = 125 bits (315), Expect = 3e-28
Identities = 82/261 (31%), Positives = 129/261 (49%), Gaps = 19/261 (7%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
IDTH HL+ ++ DL EV E GV V + ++ I+ +F + FA+G
Sbjct: 4 IDTHVHLNFDTFQPDLAEVRSRWQEAGVVHLVHSCVEPEEFPSIQAIAHQFPELSFAVGL 63
Query: 63 HPYDVESFDESLFEKFVG----HQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
HP D + + E+ + K VAIGE GLD+Y+ +Q+ +F Q+
Sbjct: 64 HPLDADKWQSDTGEQILSLARSDSKVVAIGETGLDFYKADN-------DEQQRMVFEAQL 116
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNYP-----KAFGVLHCFNADGMLLE--LSDRFYY 171
+ Q N P+IIH R+A+ +L+ + K GV+HC+ + L FY
Sbjct: 117 AIASQLNLPVIIHCRDAAVAVREVLQTWQERTGAKIRGVMHCWGGTPEETQWFLDLGFYI 176
Query: 172 GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRG-TRNSPTYIPLIAQKIAE 230
G TFK+AK + + +RLL+ETD P+L+P P RG RN P Y+ +A+++A
Sbjct: 177 SFSGTVTFKSAKSIQASAAMVKSDRLLIETDCPFLSPVPKRGEKRNEPAYVRHVAEQVAA 236
Query: 231 IINIETEELASLSTHNAQMLF 251
+ E +++ + NA LF
Sbjct: 237 LRGETLEVISAQTAQNACELF 257
>ref|NP_662690.1| (NC_002932) Sec-independent protein translocase protein TatD,
putative [Chlorobium tepidum TLS]
gb|AAM73032.1| (AE012933) Sec-independent protein translocase protein TatD,
putative [Chlorobium tepidum TLS]
Length = 259
Score = 124 bits (312), Expect = 8e-28
Identities = 83/265 (31%), Positives = 134/265 (50%), Gaps = 23/265 (8%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVI-PGADMKDLNRAIEISEKFEGVFFAI 60
F D HCHL D+++D + V+ + G+ QCVI PG ++ R+IE++ ++ ++ +
Sbjct: 6 FCDIHCHLSFPDFDDDRDRVIGDLRAAGL-QCVIDPGTGVETNRRSIELANGYDFIYSNV 64
Query: 61 GAHPYDVE-SFDESLFEKFVGHQ---KCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
G HP++ LF+K G K V IGE GLDY+ ++ + Q+ F +
Sbjct: 65 GLHPHETNVPLSPELFDKLAGQARSAKVVGIGEIGLDYHW------PDHDPAHQQAAFRE 118
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNADGMLLELSDR-----F 169
+ ++ + P++IH R+A D L +L + G +HCF+ D L+++ R
Sbjct: 119 MLRIAVDLDLPVVIHCRDAWPDMLRILSEERSSALRGAMHCFSGD---LDMACRCISLGL 175
Query: 170 YYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIA 229
I G T+K + L E+ + LL ETD+PYL P P RG RN P ++ +KIA
Sbjct: 176 KISIPGTITYKKSL-LPEVAASVGLGDLLSETDAPYLAPVPKRGKRNEPAFVVHTVRKIA 234
Query: 230 EIINIETEELASLSTHNAQMLFSFP 254
+ EE+ NA+ LF P
Sbjct: 235 DHRQEPFEEVTEALVSNARTLFGLP 259
>ref|NP_299199.1| (NC_002488) type V secretory pathway protein [Xylella fastidiosa
9a5c]
pir||A82622 type V secretory pathway protein XF1913 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF84719.1|AE004011_4 (AE004011) type V secretory pathway protein [Xylella fastidiosa
9a5c]
Length = 268
Score = 124 bits (312), Expect = 8e-28
Identities = 81/267 (30%), Positives = 136/267 (50%), Gaps = 23/267 (8%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI-G 61
ID +L H+ ++ D + VL+ + E GV Q V+ G++ + A+ ++++ G+ +A G
Sbjct: 4 IDIGANLTHESFDYDRDAVLQRAYEAGVVQMVVTGSNRTHSSLALLLAQRHPGLLYATAG 63
Query: 62 AHPYDVESFDESL---FEKFVGHQKCVAIGECGLDYYR--LPELNERENYKSKQKEIFTK 116
HP+ + + H++ VA+GECGLDY+R P Q+ F +
Sbjct: 64 VHPHCAAEYTDECDAELRMLHAHKEVVAVGECGLDYFRDFCPHRT--------QQHAFER 115
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFG--VLHCFNADGMLL--ELSDRFYYG 172
Q++ + ++ KPL +H REA D + +++ + G V+HCF G L L +Y G
Sbjct: 116 QLQLASENGKPLFLHQREAHNDFMAIMRGFQGRLGPVVVHCFTGTGEELFDYLDHDWYIG 175
Query: 173 IGG-VSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFR----GTRNSPTYIPLIAQK 227
I G + + L E++ IP+ RL++ETD+PYL P R RN P ++P I +
Sbjct: 176 ITGWLCDERRGMHLRELVRHIPEKRLMIETDAPYLLPRTLRPLPKDRRNEPAFLPHIVTE 235
Query: 228 IAEIINIETEELASLSTHNAQMLFSFP 254
+A + A+ ST A+ FS P
Sbjct: 236 LARNRGEDVVTCAARSTVVAREFFSLP 262
>ref|NP_301298.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
emb|CAC29747.1| (AL583917) conserved hypothetical protein [Mycobacterium leprae]
Length = 262
Score = 124 bits (310), Expect = 1e-27
Identities = 77/258 (29%), Positives = 131/258 (49%), Gaps = 11/258 (4%)
Query: 3 IDTHCHLDHKDYEN--DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
+D H HLD + D+ +++ + GV V D++ I + V+ A+
Sbjct: 2 VDAHTHLDACGARDADDVNAIVERAAAVGVVAVVTVADDLESARWVIAAAGWDRRVYAAV 61
Query: 61 GAHPYDVESFDESL---FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
HP S + E+ H + VA+GE G+D Y L+ Q+E F
Sbjct: 62 ALHPTRANSLTSAARAKIEQLAAHPRMVAVGETGMDLYWPGRLDSCAP-PDVQREAFAWH 120
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFNADGMLLE--LSDRFYYGI 173
I+ + + KPL+IH R+A + L++L+ P+ + HCF+++ + + + +
Sbjct: 121 IDLAKRCGKPLMIHNRQADAEVLDVLRAEGAPEQV-IFHCFSSNAAMARRCVDAGWMLSL 179
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
G +F+NA+ L E +P IP +LL+ETD+P+LTPHP RG N P +P + +AE++
Sbjct: 180 SGTVSFRNARPLREAVPLIPAQQLLVETDAPFLTPHPHRGLANEPYCLPYTVRAVAELVE 239
Query: 234 IETEELASLSTHNAQMLF 251
EELA ++T NA ++
Sbjct: 240 RSPEELAQITTSNALRVY 257
>ref|NP_640669.1| (NC_003919) type V secretory pathway protein [Xanthomonas
axonopodis pv. citri str. 306]
gb|AAM35205.1| (AE011656) type V secretory pathway protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 270
Score = 122 bits (307), Expect = 3e-27
Identities = 79/262 (30%), Positives = 134/262 (50%), Gaps = 19/262 (7%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI-G 61
ID +L H ++ D + VL+ + + GV Q VI GA + A++++++ G +A G
Sbjct: 4 IDIGANLTHDSFDRDRDAVLQRARDAGVAQLVITGASREHSPLALQLAQQHPGFLYATAG 63
Query: 62 AHPYDVESFD---ESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
HP+ F E+ H + VA+GECGLDY+R + R Q++ F +Q+
Sbjct: 64 VHPHHAVEFTAECEAEMRTLQAHPQVVAVGECGLDYFR--DFAPRP----AQRKAFERQL 117
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNYPKAFG--VLHCFNA--DGMLLELSDRFYYGIG 174
+ + + KPL +H R+A D + +++++ G V+HCF D + L +Y GI
Sbjct: 118 QLAADNGKPLFLHQRDAHEDFIAIMRSFEGRLGAAVVHCFTGTRDELFAYLDRDYYIGIT 177
Query: 175 G-VSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPF----RGTRNSPTYIPLIAQKIA 229
G + + L E++ IP NRL++ETD+PYL P + RN P ++ I +++A
Sbjct: 178 GWLCDERRGAHLRELVRNIPANRLMIETDAPYLLPRTLKPMPKDRRNEPMFLSHIVEELA 237
Query: 230 EIINIETEELASLSTHNAQMLF 251
+ A+ ST A+ F
Sbjct: 238 RDRGEDVAVTAANSTAAARAFF 259
>ref|NP_293870.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||C75554 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF09734.1|AE001877_1 (AE001877) conserved hypothetical protein [Deinococcus radiodurans]
Length = 262
Score = 122 bits (307), Expect = 3e-27
Identities = 80/259 (30%), Positives = 125/259 (47%), Gaps = 23/259 (8%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D+H HLD+ L++ E G+T V GA + A+ ++E+F V+ +G H
Sbjct: 14 DSHTHLDY------LDDPASARGELGLTGMVCIGASAEHARNAVALAEQFGDVWATVGLH 67
Query: 64 PYDVESFD---ESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P DVE + E + H + V IGE GLD Y + + Q F Q+E
Sbjct: 68 PGDVEEDSPDTRAAIEALLDHPRVVGIGESGLDDYW------NDTQRPAQLAAFEWQLEL 121
Query: 121 SIQHNKPLIIHIRE------ASFDSLNLLKNYPKAFGVLHCFNADGMLLE--LSDRFYYG 172
+ + KPL+IH R+ A + L+++P +LHCF LL L Y+G
Sbjct: 122 ARRSGKPLVIHTRDKPGQDSAHRGVIETLRDWPDVQVILHCFTGHAGLLACGLERGAYFG 181
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
G T+KNA + ++P +RLL+ETD+P+L P P RG N P Y+ +A +
Sbjct: 182 FAGNVTYKNAVEIQAAAQQVPLDRLLVETDAPFLAPVPKRGKPNRPGYVRYTLDFVAGLR 241
Query: 233 NIETEELASLSTHNAQMLF 251
+ EL ++ NA+ ++
Sbjct: 242 GLNPAELERVTDENARRVY 260
>ref|NP_275376.1| (NC_000916) conserved protein [Methanothermobacter
thermautotrophicus] [Methanothermobacter
thermautotrophicus str. Delta H]
pir||A69129 conserved hypothetical protein MTH233 - Methanobacterium
thermoautotrophicum (strain Delta H)
gb|AAB84739.1| (AE000810) conserved protein [Methanothermobacter
thermautotrophicus str. Delta H]
Length = 256
Score = 121 bits (304), Expect = 6e-27
Identities = 76/259 (29%), Positives = 132/259 (50%), Gaps = 17/259 (6%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFF-A 59
+ ID HCHLD KD+ + EEV++ + K + + G + RA+E++ G
Sbjct: 5 IIIDVHCHLDFKDFNRNREEVIERARSK-LRAVIDSGVGLGGNRRALELASLNPGFICPT 63
Query: 60 IGAHPYDVESFDESLFEKFVGHQKC-----VAIGECGLDYYRLPELNERENYKSKQKEIF 114
+G HP D + L + V + VA+GE G+D++ + E + +Q+E F
Sbjct: 64 MGFHPVDASKARQDLIGEVVSQIESNIDLIVAVGETGMDFHHTRD----EEGRRRQEETF 119
Query: 115 TKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLE--LSDRFYYG 172
+E + +H PL++H R+A +L + Y + HC+ L + +Y
Sbjct: 120 RVFVELAAEHEMPLVVHARDAEERALETVLEYRVPEVIFHCYGGSIETARRILDEGYYIS 179
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
I + F ++ +E++ IP +L ETDSPYL+P FRG RN P ++ + IA I
Sbjct: 180 ISTLVAF--SEHHMELVRAIPLEGMLTETDSPYLSP--FRGKRNEPAFVEEAVRAIARIK 235
Query: 233 NIETEELASLSTHNAQMLF 251
+++ E++ S++T NA+ +F
Sbjct: 236 DMDLEDVDSITTANAERVF 254
>ref|NP_326367.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis]
emb|CAC13709.1| (AL445565) conserved hypothetical protein [Mycoplasma pulmonis]
Length = 435
Score = 120 bits (302), Expect = 1e-26
Identities = 73/260 (28%), Positives = 137/260 (52%), Gaps = 24/260 (9%)
Query: 3 IDTHCHLDHKDYEN---DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
+D+H H+ K Y+N ++E + K ++K + G D KD +E+++ + V+
Sbjct: 187 VDSHSHITSKYYKNPQKEIENIFKNQIKK----VALVGIDQKDNKEILELAKINQNVYSI 242
Query: 60 IGAHPYDV-ESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEI--FTK 116
+G HP E+ D EK + K +AIGE GLD+YR + Y S++ +I FT
Sbjct: 243 VGLHPTIANENQDYQEIEKLI-ENKTIAIGEIGLDFYR-------KKYPSQENQIRSFTS 294
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRF-----YY 171
Q++ ++++N P+++H+R+A D + + + K + + F++ +E + +F Y+
Sbjct: 295 QLDLALKYNLPVVLHVRDAH-DKIYEIISDKKYSSLTYIFHSHSGYIEWTRKFLSLNSYF 353
Query: 172 GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEI 231
GV TF + + ++ +P R+L+E+DSPYLTP ++ +N Y+ + Q IA I
Sbjct: 354 SFSGVITFFENQLIHRVIKYLPLERILVESDSPYLTPSQYKNKKNHSHYVKYVIQAIAAI 413
Query: 232 INIETEELASLSTHNAQMLF 251
+++A + N F
Sbjct: 414 KQSSPQKIAKIVLDNFNRTF 433
>ref|NP_072669.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium]
sp|P47255|Y009_MYCGE Putative deoxyribonuclease MG009
pir||I64200 hypothetical protein homolog MG009 - Mycoplasma genitalium
gb|AAC71225.1| (U39679) conserved hypothetical protein [Mycoplasma genitalium]
Length = 262
Score = 120 bits (302), Expect = 1e-26
Identities = 89/267 (33%), Positives = 135/267 (50%), Gaps = 26/267 (9%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA-I 60
+ D HCHL+ + +++E+ + + V+ G D+ + A+E+++K+ + A I
Sbjct: 3 YFDAHCHLNCEPLLSEIEKSIANFKLINLKANVV-GTDLDNSKIAVELAKKYPDLLKATI 61
Query: 61 GAHPYDVESFD-----ESLFEKFVGHQKCVA-IGECGLDYYRLPELNERENYKSKQKEIF 114
G HP DV D + L E + ++ ++ IGE G DY+ E E +N + F
Sbjct: 62 GIHPNDVHLVDFKKTKKQLNELLINNRNFISCIGEYGFDYHYTTEFIELQN------KFF 115
Query: 115 TKQIEFSIQHNKPLIIHIREAS---FDSLNLLKNYPKAFGVLHCFNAD----GMLLELSD 167
Q E + + ++HIR+A ++ L LK P + HCF+ D LL L D
Sbjct: 116 EMQFEIAETNKLVHMLHIRDAHEKIYEILTRLK--PTQPVIFHCFSQDINIAKKLLSLKD 173
Query: 168 R---FYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLI 224
++ I G+ TFKNA+ L E L IP LL ETDSP+LTP PFRG N P Y+
Sbjct: 174 LNIDIFFSIPGIVTFKNAQALHEALKIIPSELLLSETDSPWLTPSPFRGKVNWPEYVVHT 233
Query: 225 AQKIAEIINIETEELASLSTHNAQMLF 251
+AEI IE E+ + NA+ LF
Sbjct: 234 VSTVAEIKKIEIAEMKRIIVKNAKKLF 260
>ref|NP_635694.1| (NC_003902) type V secretory pathway protein [Xanthomonas
campestris pv. campestris str. ATCC 33913]
gb|AAM39618.1| (AE012126) type V secretory pathway protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 268
Score = 120 bits (301), Expect = 1e-26
Identities = 83/265 (31%), Positives = 132/265 (49%), Gaps = 19/265 (7%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI-G 61
ID +L H ++ D + VL+ + + GV Q VI GA + A++++++ G +A G
Sbjct: 4 IDIGANLTHDSFDRDRDAVLQRARDAGVAQLVITGASREHSPLALQLAQQHPGFLYATAG 63
Query: 62 AHPYDVESFD---ESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
HP+ F E + VA+GECGLDYYR + R Q + F +Q+
Sbjct: 64 VHPHHAVEFTAECEREMRALQAQPQVVAVGECGLDYYR--DFAPRP----AQHKAFERQL 117
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNYPKAFG--VLHCFNADGM-LLELSDRFYY-GIG 174
+ + + KPL +H R+A D L++++ + G V+HCF L + DR YY GI
Sbjct: 118 QLAADNGKPLFLHQRDAHDDFLSIMRAFDGRLGAAVVHCFTGTREELFDYLDRDYYIGIT 177
Query: 175 G-VSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPF----RGTRNSPTYIPLIAQKIA 229
G + + L E++ IP NRL++ETD+PYL P + RN P ++ I +++A
Sbjct: 178 GWLCDERRGAHLRELVRNIPANRLMIETDAPYLLPRTLKPLPKERRNEPMFLSHIVEELA 237
Query: 230 EIINIETEELASLSTHNAQMLFSFP 254
+ A ST A+ F P
Sbjct: 238 RDRGEDVAVTAENSTAAARAFFRLP 262
>ref|NP_504476.1| (NM_072075) CD4.2.p [Caenorhabditis elegans]
pir||T32529 hypothetical protein CD4.2 - Caenorhabditis elegans
gb|AAB88340.1| (AF036694) Hypothetical protein CD4.2 [Caenorhabditis elegans]
Length = 286
Score = 120 bits (301), Expect = 1e-26
Identities = 82/287 (28%), Positives = 141/287 (48%), Gaps = 48/287 (16%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEG-VFFAIG 61
+D +L H Y+ DL +VL + + G+++ ++ G K + ++ EK+ G ++F G
Sbjct: 7 VDIGANLGHPSYQKDLNDVLDRAKQAGLSKIMVTGTSEKISHECADLVEKYPGFLYFTAG 66
Query: 62 AHPYDVESFDESLFE---KFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
HP+D + +++ E K + CVA+GECGLD+ N + + QKE+F KQ+
Sbjct: 67 VHPHDAKDWNDGTLEALKKLQENPSCVAVGECGLDF------NRNFSPQDVQKEVFAKQV 120
Query: 119 EFSIQHNKPLIIHIREASFDSLNLL----KNYPKAFGVLHCFNADGMLLE----LSDRFY 170
+ +++ KPL IH REA D + +L + P A V+HCF G ++E L FY
Sbjct: 121 DMAVKLQKPLFIHEREAHEDMVKILTAAGPSLPPA--VIHCFT--GTVVEAKKYLEMGFY 176
Query: 171 YGIGGVSTFKNAKRLVEI---LPKIPKNRLLLETDSPYLTP------------------- 208
G+ G + V+ +IP +L+LETD+PY+ P
Sbjct: 177 IGLTGFLWKDRSDNGVQAGLRSGEIPIEKLVLETDAPYMYPKINDKKIPKEIKSLITPET 236
Query: 209 ---HPFRG-TRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLF 251
H F RN P + + + +A + +E+A ++T NA+ ++
Sbjct: 237 EALHNFSSFNRNEPCSLAAVCELVAAFAGRDPKEVAKITTENAKKVY 283
>ref|NP_109697.1| (NC_000912) hydrolase [Mycoplasma pneumoniae]
sp|P78005|Y009_MYCPN Putative deoxyribonuclease MG009 homolog (D12_orf261)
pir||S73471 hypothetical protein yabD - Mycoplasma pneumoniae (strain ATCC
29342)
gb|AAB95793.1| (AE000016) hydrolase [Mycoplasma pneumoniae]
Length = 261
Score = 120 bits (301), Expect = 1e-26
Identities = 85/265 (32%), Positives = 133/265 (50%), Gaps = 22/265 (8%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA-I 60
+ D HCHL+ + E+ L G+ V+ G ++ + A+ ++++ + A +
Sbjct: 3 YFDAHCHLNCEPLLEQHEKSLANFRLIGLKANVV-GTNLTNSQIAVNLAKQHPDLLKAGV 61
Query: 61 GAHPYDVESFD----ESLFEKFVG-HQKCVA-IGECGLDYYRLPELNERENYKSKQKEIF 114
G HP DV+ FD ++ +K V H+ ++ IGE G DY+ ++Y ++Q++ F
Sbjct: 62 GIHPNDVQLFDLKAAQATLKKLVSTHRSFISCIGEYGFDYHYT------KDYITQQEQFF 115
Query: 115 TKQIEFSIQHNKPLIIHIREASFDSLNLLKNY-PKAFGVLHCFNADG-------MLLELS 166
Q + + Q+ ++H+R+ +LK PK V HCF+ D L E+
Sbjct: 116 LMQFQLAEQYQLVHMLHVRDVHERIYEVLKRLKPKQPVVFHCFSEDTNTALKLLTLREVG 175
Query: 167 DRFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQ 226
+ Y+ I G+ TFKNAK L L IP LL ETDSPYL P PFRG N P + Q
Sbjct: 176 LKVYFSIPGIVTFKNAKNLQAALSVIPTELLLSETDSPYLAPVPFRGKTNWPECVVHTVQ 235
Query: 227 KIAEIINIETEELASLSTHNAQMLF 251
IA+I + E+ HNA+ LF
Sbjct: 236 TIADIKQVPLAEIKQAIVHNAKKLF 260
>ref|NP_627367.1| (NC_003888) conserved hypothetical protein SCE87.02c [Streptomyces
coelicolor A3(2)]
emb|CAB59647.1| (AL132674) conserved hypothetical protein SCE87.02c [Streptomyces
coelicolor A3(2)]
Length = 296
Score = 117 bits (294), Expect = 9e-26
Identities = 83/279 (29%), Positives = 130/279 (45%), Gaps = 38/279 (13%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D+H HLD + +EE L ++ GVT V G D+ A E + + V + H
Sbjct: 27 DSHTHLDMQS--GTVEEALAKAASVGVTTVVQVGCDLAGSRWAAETAAAHDAVHATVALH 84
Query: 64 PYDVE----------------------SFDESLFE--KFVGHQKCVAIGECGLDYYRL-P 98
P + + D++L E + + +GE GLDY+R P
Sbjct: 85 PNEAPRIVHGDPDGWSRQGAREPGGDAALDDALAEIDRLAALPQVKGVGETGLDYFRTGP 144
Query: 99 ELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNY--PKAFGVLHCF 156
E K Q+ F IE + +H K L+IH R+A D L +LK P+ V HC+
Sbjct: 145 E------GKEAQERSFRAHIEIAKRHGKTLVIHDRDAHTDVLRVLKEEGAPERT-VFHCY 197
Query: 157 NADGMLLELSDR--FYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGT 214
+ D + + R +Y G TFKNA+ L + L P +L+ETD+P+LTP P+RG
Sbjct: 198 SGDAEMAGICARAGYYMSFAGNVTFKNAQNLRDALAVAPPELVLVETDAPFLTPAPYRGR 257
Query: 215 RNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLFSF 253
N+P +P+ + +AE+ ++ + LA+ N F +
Sbjct: 258 PNAPYLVPVTVRAMAEVRGVDEDTLATALAANTARAFGY 296
>ref|NP_404080.1| (NC_003143) putative metalloenzyme [Yersinia pestis]
emb|CAC89292.1| (AJ414142) putative metalloenzyme [Yersinia pestis]
Length = 262
Score = 117 bits (292), Expect = 2e-25
Identities = 78/262 (29%), Positives = 124/262 (46%), Gaps = 16/262 (6%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIG 61
FIDTHCH D + D L + E V Q ++P +R + +++++ +F A+G
Sbjct: 4 FIDTHCHFDFPPFTGDEAASLACAAEANVRQLIVPSVKAAYFSRILALADRYPPLFAALG 63
Query: 62 AHPYDVESFDESLFEKFVGH-----QKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
HP + +++ H K VAIGE GLD Y E Q I
Sbjct: 64 LHPLYIAEHEDADLAALASHLADKPPKLVAIGEIGLDLYM------DEPQFPHQLVILNM 117
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKN--YPKAFGVLHCFNADGMLLELSDR--FYYG 172
Q+E + QH+ P+I+H R + L+ P+A GV+H F + R +Y G
Sbjct: 118 QLELAKQHDLPVILHSRRSHDPLAAALRKAALPRA-GVIHGFAGSLAQAQAFIRLGYYIG 176
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
+GG T+K A++ ++ +P + LLLETD+P + F+G N P + + E+
Sbjct: 177 VGGTITYKRAQKTRHVMASLPLSSLLLETDAPDMPLASFQGQANRPERAANVFAALCELR 236
Query: 233 NIETEELASLSTHNAQMLFSFP 254
+E+A+ N+Q LFS P
Sbjct: 237 PEPADEIAAELMCNSQRLFSLP 258
>ref|NP_613831.1| (NC_003551) Mg-dependent DNase [Methanopyrus kandleri AV19]
gb|AAM01761.1| (AE010349) Mg-dependent DNase [Methanopyrus kandleri AV19]
Length = 257
Score = 115 bits (289), Expect = 3e-25
Identities = 77/255 (30%), Positives = 132/255 (51%), Gaps = 18/255 (7%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEG-VFFAIG 61
+D HCHL K ++ + +EV++ S +K V + GA R +E++E+FEG VF IG
Sbjct: 5 VDAHCHLCFKYFKGEEDEVVERSRKK-VLRVYDCGATPGTARRTLELAERFEGFVFSTIG 63
Query: 62 AHPYDVESFDESLFEKFVG-----HQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
HP +S+ + V + AIGE GLDY+ + E ER + +E+F +
Sbjct: 64 LHPPRAPRMQQSVIDDVVRIIREHADRIAAIGEIGLDYHYVKEPGERR----RMREVFER 119
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLL-ELSDRFYY-GIG 174
++ + + +KP++IH R+A +L +L++Y + HC++ L ++D +Y +
Sbjct: 120 FLKLAEELDKPVVIHARDAEEHALEVLEDY-DVVAMFHCYDGPAELARRIADAGHYVSLS 178
Query: 175 GVSTFKNAK--RLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
+ + K R E+L +P L ETDSPYL+ P RG RN P + + + +A +
Sbjct: 179 TIHVIRGPKDERTRELLETVPLEAALTETDSPYLS--PVRGERNEPRNVWRVIELLARVK 236
Query: 233 NIETEELASLSTHNA 247
+ E+ + NA
Sbjct: 237 GVPVGEVVETTARNA 251
>ref|NP_231983.1| (NC_002505) conserved hypothetical protein [Vibrio cholerae]
pir||A82088 conserved hypothetical protein VC2353 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF95496.1| (AE004305) conserved hypothetical protein [Vibrio cholerae]
Length = 283
Score = 115 bits (287), Expect = 6e-25
Identities = 75/259 (28%), Positives = 131/259 (49%), Gaps = 20/259 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEG-VFFAIGA 62
DTHCH D + E L+++ + GV + V+P +D E++++F +++A+G
Sbjct: 24 DTHCHFDFPPFTATPELELQKAAQHGVRRLVVPSIGPQDWQAVTELAQRFPSTIYYALGF 83
Query: 63 HPYDVESFDES---LFEKFV--GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
HP +++ + EK + Q CVA+GECGLD ++ + Q+++ Q
Sbjct: 84 HPLYLDASSPTHLPALEKALMQAEQACVAVGECGLDGMIDVDV-------ALQEQMLIAQ 136
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNYP-KAFGVLHCFNADGMLLELSD----RFYYG 172
+ + Q P+I+H R L LLK + GVLH F+ G + E F G
Sbjct: 137 LSMASQAKLPVILHSRRTHNRLLQLLKQQRFQQGGVLHAFS--GSVQEAQQFVDLGFKIG 194
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
+GGV T+ A + + + +P ++LETD+P + + F+G N P + + + +AE+
Sbjct: 195 VGGVITYPRANKTRQAIAALPVEHIVLETDAPDMPLNGFQGQANHPAQLAKVLETLAELK 254
Query: 233 NIETEELASLSTHNAQMLF 251
+ + LA + N+QMLF
Sbjct: 255 GVSAQYLAPILWQNSQMLF 273
>gb|AAF55876.1| (AE003734) CG3308 gene product [Drosophila melanogaster]
Length = 319
Score = 114 bits (286), Expect = 8e-25
Identities = 88/286 (30%), Positives = 135/286 (46%), Gaps = 44/286 (15%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI-G 61
ID +L +K Y DL+ V++ + + GV + ++ G +K A+ +S + + ++ G
Sbjct: 38 IDVGANLTNKKYSRDLDSVVQRARDAGVQKLMVHGTSVKSSKEALRLSRIYPDIIYSTAG 97
Query: 62 AHPYDVESFDESL-----FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
HP+D +S E E Q+CVAIG CGLDY R + +E + QK+IF K
Sbjct: 98 IHPHDSKSIVEEPATWFDLEHIAQAQECVAIGPCGLDYQR--DFSEPD----AQKQIFAK 151
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLL---KNYPKAFGVLHCFNADGMLLELSDRFYYGI 173
Q+ +I+ NKPL+IH R A D L +L +N P A+ L L RFY +
Sbjct: 152 QLHLAIRLNKPLLIHERSAQLDLLEILDKFENLPPVIIRGFMGTAEEALKYLDRRFYISL 211
Query: 174 GGV----STFKNAKRLVEILPKIPKNRLLLETDSPYLTP---------HPFRG------- 213
G + +RL+E +P +RLL+ETD+P++ P H G
Sbjct: 212 TGYLCKDKSDTGVRRLLED-GTLPLDRLLVETDAPFMYPNTRASKLPQHVKTGITERSLL 270
Query: 214 --------TRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLF 251
RN P +P I + IA + +E+A + NA LF
Sbjct: 271 YLHRYCTFQRNEPCSLPAIVEMIAAFMKKSPDEVALATAFNALKLF 316
>gb|EAA03658.1| (AAAB01008799) agCP14769 [Anopheles gambiae str. PEST]
Length = 309
Score = 114 bits (285), Expect = 1e-24
Identities = 81/286 (28%), Positives = 136/286 (47%), Gaps = 44/286 (15%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA-IG 61
+D +L +K Y DL+ V++ + + GV + ++PG +K A+ ++ + G+ ++ G
Sbjct: 27 VDVGANLTNKKYIRDLDSVIQRAKDSGVQKIMVPGTSVKSSKEALRLTRIYPGIIYSTAG 86
Query: 62 AHPYDVESFDESL-----FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
HP+D +S E F+ G +CVAIG CGLDY R + +E QKEIF +
Sbjct: 87 IHPHDSKSIIEEPSTWHDFQLMAGAPECVAIGPCGLDYQR--DFSE----PCVQKEIFER 140
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVL---HCFNADGMLLELSDRFYYGI 173
Q++ + + KP++IH R A D L +L + A ++ D L L +Y +
Sbjct: 141 QLKLACELQKPILIHERSAQEDVLEILTKFQPAQPIIVRGFMGTTDEALKYLERDYYISL 200
Query: 174 GGV----STFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRG---------------- 213
G + ++L+E ++P RLL+ETDSP++ P+
Sbjct: 201 TGYLCKDKSDTGVRKLLED-GRLPMERLLVETDSPFMYPNTRASKLPQHVKGGLTERSLL 259
Query: 214 --------TRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLF 251
RN P +P I + IA +N + E++A + NA LF
Sbjct: 260 YLHRYCTFQRNEPCSLPAIVEMIAAFMNKKPEDVALATAFNALKLF 305
>ref|NP_418795.1| (NC_000913) Mg-dependent DNase [Escherichia coli K12]
sp|P39408|YJJV_ECOLI Putative deoxyribonuclease yjjV
Length = 259
Score = 113 bits (283), Expect = 2e-24
Identities = 70/264 (26%), Positives = 133/264 (49%), Gaps = 20/264 (7%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIG 61
FIDTHCH D + D E L+ + + GV + ++P + ++ R + ++E ++ ++ A+G
Sbjct: 5 FIDTHCHFDFPPFSGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALG 64
Query: 62 AHPYDVESFDESLFEKFV-----GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
HP +E + E+ K VA+GE GLD + ER+ + + +
Sbjct: 65 LHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQFERQQW------LLDE 118
Query: 117 QIEFSIQHNKPLIIHIREASFD-SLNLLKNYPKAFGVLHCFNADGMLLELSDRFY----- 170
Q++ + +++ P+I+H R +++L ++ GV+H F+ L+ ++RF
Sbjct: 119 QLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGFSGS---LQQAERFVQLGYK 175
Query: 171 YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
G+GG T+ A + +++ K+P LLLETD+P + + F+G N P + + E
Sbjct: 176 IGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQPNRPEQAARVFAVLCE 235
Query: 231 IINIETEELASLSTHNAQMLFSFP 254
+ +E+A +N LF+ P
Sbjct: 236 LRREPADEIAQALLNNTYTLFNVP 259
>ref|NP_650963.1| (NM_142706) CG3308 gene product [Drosophila melanogaster]
gb|AAL25294.1| (AY060255) GH08045p [Drosophila melanogaster]
Length = 319
Score = 113 bits (283), Expect = 2e-24
Identities = 87/286 (30%), Positives = 135/286 (46%), Gaps = 44/286 (15%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI-G 61
ID +L +K Y DL+ V++ + + GV + ++ G +K A+ +S + + ++ G
Sbjct: 38 IDVGANLTNKKYSRDLDSVVQRARDAGVQKLMVHGTSVKSSKEALRLSRIYPDIIYSTAG 97
Query: 62 AHPYDVESFDESL-----FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
HP+D +S E E Q+CVAIG CGLDY R + +E + Q++IF K
Sbjct: 98 IHPHDSKSIVEEPATWFDLEHIAQAQECVAIGPCGLDYQR--DFSEPD----AQRQIFAK 151
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLL---KNYPKAFGVLHCFNADGMLLELSDRFYYGI 173
Q+ +I+ NKPL+IH R A D L +L +N P A+ L L RFY +
Sbjct: 152 QLHLAIRLNKPLLIHERSAQLDLLEILDKFENLPPVIIRGFMGTAEEALKYLDRRFYISL 211
Query: 174 GGV----STFKNAKRLVEILPKIPKNRLLLETDSPYLTP---------HPFRG------- 213
G + +RL+E +P +RLL+ETD+P++ P H G
Sbjct: 212 TGYLCKDKSDTGVRRLLED-GTLPLDRLLVETDAPFMYPNTRASKLPQHVKTGITERSLL 270
Query: 214 --------TRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLF 251
RN P +P I + IA + +E+A + NA LF
Sbjct: 271 YLHRYCTFQRNEPCSLPAIVEMIAAFMKKSPDEVALATAFNALKLF 316
>ref|NP_619472.1| (NC_003552) membrane targeting/translocation system protein
[Methanosarcina acetivorans str. C2A] [Methanosarcina
acetivorans C2A]
gb|AAM07952.1| (AE011184) membrane targeting/translocation system protein
[Methanosarcina acetivorans str. C2A] [Methanosarcina
acetivorans C2A]
Length = 252
Score = 112 bits (281), Expect = 3e-24
Identities = 83/257 (32%), Positives = 127/257 (49%), Gaps = 20/257 (7%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
ID+HCHLD + D EE + + + GV V G +K ++E++EK E + ++G
Sbjct: 6 IDSHCHLDFPKFNPDREEAIHRARKAGVVGMVNSGISLKGNRMSLELAEKNEDIHASLGL 65
Query: 63 HP-------YDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFT 115
P DV + S E G K VAIGE GLD+ ERE +Q F
Sbjct: 66 SPDIGRGGTDDVINSILSQIEDNAG--KAVAIGEAGLDFQDCKTNEERE----RQTASFK 119
Query: 116 KQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFN-ADGMLLELSDRFYYGIG 174
K IE + KPL++H R A + L L++N + HC++ + + E+ D YY I
Sbjct: 120 KVIELAKDLEKPLVVHARMAEAEVLELVRNVDTV--IYHCYSGSPETMQEIVDAGYY-IS 176
Query: 175 GVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINI 234
+ ++ + ++P LLLETDSP+L+P R RN P YI +A++ +
Sbjct: 177 LATLVCFSEHHQALAAEVPPENLLLETDSPFLSP---RKGRNEPAYIVDSIPVVAQLKEM 233
Query: 235 ETEELASLSTHNAQMLF 251
+ E+A T NA+ +F
Sbjct: 234 KPAEIARTVTGNARRIF 250
>ref|NP_297470.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
pir||A82837 conserved hypothetical protein XF0177 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF82990.1|AE003872_1 (AE003872) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 260
Score = 112 bits (280), Expect = 4e-24
Identities = 75/259 (28%), Positives = 124/259 (46%), Gaps = 17/259 (6%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
+ ID+HCHLD ++ D E++ + G+ VIP + I + G++ A
Sbjct: 4 VLIDSHCHLDADAFDGDRAEIIARAQAAGIIAQVIPAVTAAKWPKLRTICTQTSGLYPAY 63
Query: 61 GAHPYDVESFDES---LFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G HP + + ++ H++ AIGECGLD+Y L LN + Q F +Q
Sbjct: 64 GLHPMFLTEHHPTHLHALRDWLEHERPCAIGECGLDFY-LEGLN-----REMQHTYFIRQ 117
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDR-----FYYG 172
+ + ++ P+I+H R A + + +K GV+H F+ LE + + F
Sbjct: 118 LMLAREYALPVIVHARHAVEEVIASIKTVGTLRGVVHSFSGS---LEQARQLWKLGFMIS 174
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
+GG T+ A RL ++ + P + LLLETD+PY RG RN P + I IA +
Sbjct: 175 LGGAMTYPRAHRLHQLAMETPLDCLLLETDAPYQPDSEIRGKRNEPGRLLTILDYIATLR 234
Query: 233 NIETEELASLSTHNAQMLF 251
+ E++ ++ N + LF
Sbjct: 235 KQDRTEISKVTRANTEQLF 253
>ref|NP_212328.1| (NC_001318) conserved hypothetical protein [Borrelia burgdorferi]
pir||B70124 conserved hypothetical protein BB0194 - Lyme disease spirochete
gb|AAC66570.1| (AE001129) conserved hypothetical protein [Borrelia burgdorferi]
Length = 269
Score = 112 bits (279), Expect = 5e-24
Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 20/248 (8%)
Query: 3 IDTHCHL-DHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIG 61
IDTH H + K D+ ++ E + G + + G D N ++ + VF G
Sbjct: 18 IDTHVHFYELKKRSLDVNYIINECFKNGFSYFLDVGLHPSDFNDRKDLLSPYSNVFLTAG 77
Query: 62 AHPYDVESF---DESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
HP ++ D EK + + VA+GE GLDY++ K Q + +Q+
Sbjct: 78 IHPLNLSDHFKDDIKQLEKILISENVVAVGEMGLDYFKADN-------KKFQIKALEEQL 130
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFNAD----GMLLELSDRFYYG 172
+ ++ +P+I+HIR+A D N+++ N+ G+LHC++ ++L F
Sbjct: 131 YLADKYKRPVILHIRDAYDDVYNIVRSLNFLNR-GILHCYSGTYEHAKKFIDLG--FKVS 187
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
G TFKNA+ L ++ K+ N LL+ETDSP+L P P RG NSP ++ + +IA I
Sbjct: 188 FSGNITFKNAQPLRILVGKLNINDLLIETDSPFLAPVPLRGKINSPLFLGYVCLEIARIK 247
Query: 233 NIETEELA 240
N ++A
Sbjct: 248 NCSVNDVA 255
>ref|NP_633309.1| (NC_003901) Sec-independent transport protein TatD [Methanosarcina
mazei Goe1]
gb|AAM30981.1| (AE013360) Sec-independent transport protein TatD [Methanosarcina
mazei Goe1]
Length = 257
Score = 110 bits (275), Expect = 1e-23
Identities = 80/256 (31%), Positives = 125/256 (48%), Gaps = 18/256 (7%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
ID+HCHLD + D EE ++ + + GV V G +K ++E++EK E + A+G
Sbjct: 11 IDSHCHLDFPKFNPDREEAIQRARKAGVVGMVNSGISLKGNRISLELAEKNEDIHAALGL 70
Query: 63 HPYDV------ESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
P D+ + + L + K VAIGE GLD+ ER +Q F K
Sbjct: 71 SP-DIGREGSDKDINAILAQIEANAGKAVAIGEAGLDFQDCKTDEERR----RQTASFKK 125
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNAD-GMLLELSDRFYYGIGG 175
IE + KPL++H R A + L L ++ + HC++ + E+ D YY I
Sbjct: 126 VIELAKNLEKPLVVHARMAEAEVLELARDVDTV--IYHCYSGSVETMKEIVDAGYY-ISL 182
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIE 235
+ ++ + ++P LLLETDSP+L+P R RN P +I +AE +E
Sbjct: 183 ATLVCFSEHHQTLAAEVPPENLLLETDSPFLSP---RRGRNEPAFIVDSIPVVAEYKEME 239
Query: 236 TEELASLSTHNAQMLF 251
E+A +T NA+ +F
Sbjct: 240 PAEIAKFATENARRVF 255
>gb|AAC19243.1| (AF067848) MttC [Escherichia coli]
Length = 264
Score = 109 bits (272), Expect = 3e-23
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D +L + D ++V+ + + GV +I G ++++ +A +++ ++ + G H
Sbjct: 7 DIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVH 66
Query: 64 PYDVESFDESLFEKFV---GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+D + + E + + VAIGECGLD+ N + +Q+ F Q+
Sbjct: 67 PHDSSQWQAATEEAIIELAAQPEVVAIGECGLDF------NRNFSTPEEQERAFVAQLRI 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNA--DGMLLELSDRFYYGIGG- 175
+ N P+ +H R+A + LL+ + VLHCF + M ++ Y GI G
Sbjct: 121 AADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGW 180
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIAE 230
V + L E+LP IP +LL+ETD+PY LTP P RN P ++P I Q+IA
Sbjct: 181 VCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKP-SSRRNEPAHLPHILQRIAH 239
Query: 231 IINIETEELASLSTHNAQMLF 251
+ LA+ + NA+ LF
Sbjct: 240 WRGEDAAWLAATTDANAKTLF 260
>ref|NP_290471.1| (NC_002655) tatD gene product [Escherichia coli O157:H7 EDL933]
gb|AAG59035.1|AE005615_3 (AE005615) tatD gene product [Escherichia coli O157:H7 EDL933]
Length = 264
Score = 109 bits (272), Expect = 3e-23
Identities = 75/261 (28%), Positives = 126/261 (47%), Gaps = 20/261 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D +L + D ++V+ + + GV +I G ++++ +A +++ ++ + G H
Sbjct: 7 DIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVH 66
Query: 64 PYDVESFDESLFEKFV---GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+D + + E + + VAIGECGLD+ N + +Q+ F Q+
Sbjct: 67 PHDSSQWQAATEEAIIELAAQPEVVAIGECGLDF------NRNFSTPEEQERAFVAQLRI 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNA--DGMLLELSDRFYYGIGG- 175
+ N P+ +H R+A + LL+ + VLHCF + M ++ Y GI G
Sbjct: 121 AADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGW 180
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIAE 230
V + L E+LP IP +LL+ETD+PY LTP P RN P ++P I Q+IA
Sbjct: 181 VCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKP-SSRRNEPAHLPHILQRIAH 239
Query: 231 IINIETEELASLSTHNAQMLF 251
+ LA+ + N + LF
Sbjct: 240 WRGEDAAWLAATTDANVKTLF 260
>ref|NP_312796.1| (NC_002695) cytoplasmic Dnase [Escherichia coli O157:H7]
dbj|BAB38192.1| (AP002567) cytoplasmic Dnase [Escherichia coli O157:H7]
Length = 260
Score = 109 bits (272), Expect = 3e-23
Identities = 75/261 (28%), Positives = 126/261 (47%), Gaps = 20/261 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D +L + D ++V+ + + GV +I G ++++ +A +++ ++ + G H
Sbjct: 3 DIGVNLTSSQFAKDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVH 62
Query: 64 PYDVESFDESLFEKFV---GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+D + + E + + VAIGECGLD+ N + +Q+ F Q+
Sbjct: 63 PHDSSQWQAATEEAIIELAAQPEVVAIGECGLDF------NRNFSTPEEQERAFVAQLRI 116
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNA--DGMLLELSDRFYYGIGG- 175
+ N P+ +H R+A + LL+ + VLHCF + M ++ Y GI G
Sbjct: 117 AADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGW 176
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIAE 230
V + L E+LP IP +LL+ETD+PY LTP P RN P ++P I Q+IA
Sbjct: 177 VCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKP-SSRRNEPAHLPHILQRIAH 235
Query: 231 IINIETEELASLSTHNAQMLF 251
+ LA+ + N + LF
Sbjct: 236 WRGEDAAWLAATTDANVKTLF 256
>ref|NP_458976.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD03399.1| (AL627284) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 257
Score = 109 bits (272), Expect = 3e-23
Identities = 68/260 (26%), Positives = 123/260 (47%), Gaps = 19/260 (7%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIG 61
FIDTHCH D + D ++ + E GV + ++P + R + ++ +F ++ A+G
Sbjct: 5 FIDTHCHFDFPPFTGDERASIQRACEAGVEKIIVPATEAAHFPRVLALAARFPSLYAALG 64
Query: 62 AHPYDVESF----DESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
HP +E + L + Q VA+GE GLD YR + ++Q+ Q
Sbjct: 65 LHPIVIERHADDDPDKLQQALAQQQNVVAVGEIGLDLYR------DDPQFARQERFLDAQ 118
Query: 118 IEFSIQHNKPLIIHIREASFD-SLNLLKNYPKAFGVLHCFNADGMLLELSDRFY-----Y 171
++ + +++ P+I+H R ++ L + GV+H F+ L+ ++RF
Sbjct: 119 LQLAKRYDLPVILHSRRTHDKLAMRLKRQSLPQTGVVHGFSGS---LQQAERFVQLGYKI 175
Query: 172 GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEI 231
G+GG T+ A + +++ ++P + LLLETD+P + F+G N P + + E+
Sbjct: 176 GVGGTITYPRASKTRDVMARLPLDALLLETDAPDMPLKGFQGQPNRPEQAARVFDALCEL 235
Query: 232 INIETEELASLSTHNAQMLF 251
E +A N LF
Sbjct: 236 RPEPAEVIADTLYRNTVTLF 255
>ref|NP_187000.1| (NM_111221) unknown protein [Arabidopsis thaliana]
gb|AAF01585.1|AC009895_6 (AC009895) unknown protein [Arabidopsis thaliana]
Length = 272
Score = 108 bits (271), Expect = 4e-23
Identities = 86/266 (32%), Positives = 123/266 (45%), Gaps = 21/266 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D HCHL K + +++ +L GVT + G KD N E+ E + V G H
Sbjct: 5 DAHCHLQDKRVIDKASQLISAALAVGVTNFAVNGTSEKDWNLVKEMGETYPSVVPCFGLH 64
Query: 64 PYDVESFDESLF---EKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+ + F +KF A+GE GLD L + S Q +F Q+E
Sbjct: 65 PWFIADRSPHWFKTLKKFFETTPTAAVGEIGLDKGPLAGGID----YSDQLVVFRPQLEL 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNY-PKAFGV-LHCFNADG----MLLELSDRFYYGIG 174
+ + NKP+ +H +A D L ++++ P GV LH FN L EL Y+
Sbjct: 121 AKELNKPVAVHCIDAFDDLLEIMRSIGPFPAGVILHSFNGSAEVVPKLAELG--AYFSFS 178
Query: 175 GVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPF------RGTRNSPTYIPLIAQKI 228
G T+ + K + L IP +RLLLETDSP P + T N P I + +
Sbjct: 179 GWFTYIDEKIAKKTLKSIPSDRLLLETDSPDGLPKSDESSSDPKPTLNEPANILAVLDYV 238
Query: 229 AEIINIETEELASLSTHNAQMLFSFP 254
A + N++ EELA LS N+ LFS+P
Sbjct: 239 ANLSNMKKEELAELSYVNSVRLFSYP 264
>ref|NP_519240.1| (NC_003295) PROBABLE DEOXYRIBONUCLEASE PROTEIN [Ralstonia
solanacearum]
emb|CAD14821.1| (AL646062) PROBABLE DEOXYRIBONUCLEASE PROTEIN [Ralstonia
solanacearum]
Length = 271
Score = 108 bits (271), Expect = 4e-23
Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 23/264 (8%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M+IDTHCHLD ++++ D + V++++ GV V+P + + ++ + G +A+
Sbjct: 1 MWIDTHCHLDAREFDADRDAVIEQARVAGVRHIVVPAIARWNFDVVRALAHRQAGCCYAL 60
Query: 61 GAHPY-DVESFDESLFE------KFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEI 113
G HP ++ D+ L E + + VAIGE GLD++ ER+N +
Sbjct: 61 GIHPLCAAQASDDDLIELRRQVAASMDDPRFVAIGEIGLDFFIPDPQVERQN------AV 114
Query: 114 FTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNA--DGMLLELSDRFYY 171
+ Q++ + + + P+++H+R++ + G+ H FN D + F
Sbjct: 115 YQAQLKIAREFDLPVLLHVRKSQDQVRSAAARAGVRRGIAHAFNGSDDQARHYIETGFKL 174
Query: 172 GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFR--------GTRNSPTYIPL 223
G GGV TF A R+ + ++P ++LETD+P L P GTRN+P +
Sbjct: 175 GFGGVLTFSRAHRIRRLAAEMPLESIVLETDAPDLAPAWLADDQFSEQVGTRNAPAEVAG 234
Query: 224 IAQKIAEIINIETEELASLSTHNA 247
IA +A + I + LA+ + N+
Sbjct: 235 IAAALAALRGIAVDTLAAQARRNS 258
>ref|NP_463420.1| (NC_003197) putative hydrolase [Salmonella typhimurium LT2]
gb|AAL23379.1| (AE008914) putative hydrolase [Salmonella typhimurium LT2]
Length = 257
Score = 108 bits (270), Expect = 6e-23
Identities = 68/257 (26%), Positives = 120/257 (46%), Gaps = 13/257 (5%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIG 61
FIDTHCH D + D ++ + E GV + ++P + R + ++ +F ++ A+G
Sbjct: 5 FIDTHCHFDFPPFTGDERASIQRACEAGVEKIIVPATEAAHFPRVLALAARFPSLYAALG 64
Query: 62 AHPYDVESF----DESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
HP +E + L + Q VA+GE GLD YR + ++Q+ Q
Sbjct: 65 LHPIVIERHADDDSDKLQQALAQQQNVVAVGEIGLDLYR------DDPQFARQERFLDAQ 118
Query: 118 IEFSIQHNKPLIIHIREASFD-SLNLLKNYPKAFGVLHCFNADGMLLELSDRFYY--GIG 174
++ + +++ P+I+H R +++L + GV+H F E R Y G+G
Sbjct: 119 LQLAKRYDLPVILHSRRTHDKLAMHLKRQDLPRTGVVHGFAGSLQQAERFVRLGYKIGVG 178
Query: 175 GVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINI 234
G T+ A + +++ ++P + LLLETD+P + F+G N P + + E+
Sbjct: 179 GTITYPRASKTRDVMARLPLDALLLETDAPDMPLKGFQGQPNRPEQAARVFDALCELRPE 238
Query: 235 ETEELASLSTHNAQMLF 251
E +A N LF
Sbjct: 239 PAEVIADTLYRNTITLF 255
>ref|NP_636799.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM40723.1| (AE012242) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 255
Score = 108 bits (270), Expect = 6e-23
Identities = 77/259 (29%), Positives = 123/259 (46%), Gaps = 15/259 (5%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
ID+HCHLD +++ D V+ + GV Q V+P E G+ A G
Sbjct: 4 IDSHCHLDASEFDADRAAVIARAKAAGVMQQVVPAITAASWPGLREACALAPGLHPAYGL 63
Query: 63 HPYDVESFDES---LFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIE 119
HP ++ L +++ ++ AIGECGLD++ L L+ + Q+ F Q++
Sbjct: 64 HPIFLDLHRPEHLELLAEWIARERPCAIGECGLDFF-LDGLDAQT-----QRHYFDGQLQ 117
Query: 120 FSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADG----MLLELSDRFYYGIGG 175
+ + + PLI+H R A + + +K GV+H F L +L F G+GG
Sbjct: 118 LAKRFDLPLIVHARRAVEEVIARIKAVGGIRGVVHSFAGSPEQAQQLWKLD--FMIGLGG 175
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIE 235
T+ A RL + ++P LLLETD+P RG RN P + + IA++
Sbjct: 176 PVTYPRANRLRGLAAQMPLEHLLLETDAPDQPDAEIRGQRNEPARLRTVLDCIAQLRGEP 235
Query: 236 TEELASLSTHNAQMLFSFP 254
E +A+ ++ NA+ LF P
Sbjct: 236 AEAIAAQTSANARRLFGLP 254
>ref|NP_418283.1| (NC_000913) Mg-dependent DNase [Escherichia coli K12]
emb|CAA06727.1| (AJ005830) TatD protein [Escherichia coli]
Length = 264
Score = 107 bits (268), Expect = 9e-23
Identities = 75/261 (28%), Positives = 126/261 (47%), Gaps = 20/261 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D +L + D ++V+ + + GV +I G ++++ +A +++ ++ + G H
Sbjct: 7 DIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVH 66
Query: 64 PYDVESFDESLFEKFV---GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+D + + E + + VAIGECGLD+ N + +Q+ F Q+
Sbjct: 67 PHDSSQWQAATEEAIIELAAQPEVVAIGECGLDF------NRNFSTPEEQERAFVAQLRI 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNA--DGMLLELSDRFYYGIGG- 175
+ N P+ +H R+A + LL+ + VLHCF + M ++ Y GI G
Sbjct: 121 AADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGW 180
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIAE 230
V + L E+LP IP +LL+ETD+PY LTP P RN P ++P I Q+IA
Sbjct: 181 VCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKP-SSRRNEPAHLPHILQRIAH 239
Query: 231 IINIETEELASLSTHNAQMLF 251
+ LA+ + N + LF
Sbjct: 240 WRGEDAAWLAATTDANVKTLF 260
>sp|P27859|TATD_ECOLI Deoxyribonuclease tatD (DNAse tatD)
Length = 260
Score = 107 bits (268), Expect = 9e-23
Identities = 75/261 (28%), Positives = 126/261 (47%), Gaps = 20/261 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D +L + D ++V+ + + GV +I G ++++ +A +++ ++ + G H
Sbjct: 3 DIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVH 62
Query: 64 PYDVESFDESLFEKFV---GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+D + + E + + VAIGECGLD+ N + +Q+ F Q+
Sbjct: 63 PHDSSQWQAATEEAIIELAAQPEVVAIGECGLDF------NRNFSTPEEQERAFVAQLRI 116
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNA--DGMLLELSDRFYYGIGG- 175
+ N P+ +H R+A + LL+ + VLHCF + M ++ Y GI G
Sbjct: 117 AADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGW 176
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIAE 230
V + L E+LP IP +LL+ETD+PY LTP P RN P ++P I Q+IA
Sbjct: 177 VCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKP-SSRRNEPAHLPHILQRIAH 235
Query: 231 IINIETEELASLSTHNAQMLF 251
+ LA+ + N + LF
Sbjct: 236 WRGEDAAWLAATTDANVKTLF 256
>ref|NP_457775.1| (NC_003198) putative deoxyribonuclease [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD07916.1| (AL627278) putative deoxyribonuclease [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 260
Score = 107 bits (268), Expect = 9e-23
Identities = 76/261 (29%), Positives = 127/261 (48%), Gaps = 20/261 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D +L + D ++V+ + GV ++ G ++ + +A++++ ++ + G H
Sbjct: 3 DIGVNLTSSQFAKDRDDVVARAFAAGVKGMLLTGTNIHESQQALKLARRYPHCWSTAGVH 62
Query: 64 PYDVE---SFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+D S E + VAIGECGLD+ N + +Q+ F Q++
Sbjct: 63 PHDSSQWSSASEDAIIALANQPEVVAIGECGLDF------NRNFSTPQEQERAFQAQLQI 116
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNADGMLLELS-DR-FYYGIGG- 175
+ + P+ +H R+A L LL + + +LHCF ++ DR Y GI G
Sbjct: 117 AAELQMPIFMHCRDAHERFLALLDPWLDSLPGAILHCFTGSRQQMQACVDRGLYIGITGW 176
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIAE 230
V + L E+LP IP +LL+ETD+PY LTP P RN P Y+P I ++IA
Sbjct: 177 VCDERRGLELRELLPFIPAEKLLIETDAPYLLPRDLTPKP-TSRRNEPAYLPHILERIAL 235
Query: 231 IINIETEELASLSTHNAQMLF 251
+ + LA+++ NA+ LF
Sbjct: 236 WRGEDPQWLAAMTDANARTLF 256
>ref|NP_420629.1| (NC_002696) urease/pyrimidinase family protein [Caulobacter
crescentus CB15]
gb|AAK23797.1| (AE005856) urease/pyrimidinase family protein [Caulobacter
crescentus CB15]
Length = 262
Score = 107 bits (267), Expect = 1e-22
Identities = 67/239 (28%), Positives = 118/239 (49%), Gaps = 14/239 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M ID+H +L + D + V+ + E G+ V + I+ ++ +
Sbjct: 4 MLIDSHVNLHAPQFAEDKDAVIARAREAGIAMMVTICDKVSSFEAVHAIAMAEPDIWCTV 63
Query: 61 GAHPYDVES---FDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQ 117
G HP++ + + + + V IGECGLD++ +L+ RE Q E+F +
Sbjct: 64 GTHPHEAKENPGLTAATLVELAQRPRVVGIGECGLDFHY--DLSPRE----VQAEVFRQH 117
Query: 118 IEFSIQHNKPLIIHIREASFDSLNLLKNYPKA--FGVL-HCFNADGMLLELSDRF--YYG 172
+ + PL++H REA +L+ A F +L HC+ + L + ++
Sbjct: 118 CVAARESGLPLVVHTREADAVMGEILEAEHAAGPFKILMHCYTSGAELAARAAALGAWFS 177
Query: 173 IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEI 231
+ G++TFK A+ + ++ +P +R+++ETD PYL P P RG RN P ++P I K+AEI
Sbjct: 178 VSGIATFKAAEEVRAVIRDMPADRIIVETDCPYLAPVPMRGRRNEPAFLPHIYDKLAEI 236
>ref|NP_252254.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
pir||D83200 conserved hypothetical protein PA3564 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG06952.1|AE004777_5 (AE004777) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 225
Score = 106 bits (264), Expect = 3e-22
Identities = 67/230 (29%), Positives = 121/230 (52%), Gaps = 16/230 (6%)
Query: 34 VIPGADMKDLNRAIEISEKFEGVFFAIGAHP-----YDVESFDE--SLFEKFVGHQKCVA 86
++ G ++ R ++++ +G++ A+G HP + + D+ ++ G K A
Sbjct: 1 MVLGVYRENWQRVWDLAQAEDGLYAALGLHPVYLARHRPQHLDDLRQWLQRLRGETKLCA 60
Query: 87 IGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNY 146
+GE GLDYY L L+ + Q+ +F Q+ + + P +IH+R A ++ LK
Sbjct: 61 VGEIGLDYY-LEHLD-----RDAQQALFEAQLRLAAEFRLPALIHVRRAHAATIATLKRI 114
Query: 147 P-KAFGVLHCF--NADGMLLELSDRFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDS 203
+ G++H F + + L F G+GG T+ A RL ++ ++P ++LETD+
Sbjct: 115 RLERRGIIHAFAGSREEAREYLKLGFRLGLGGAPTWPQANRLRKVAAELPAEAIVLETDA 174
Query: 204 PYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLFSF 253
P + P G RNSP ++P I + +AE+ ++ EELA+ S+ NA LF +
Sbjct: 175 PDMAPSMHPGQRNSPEHLPDICRALAELRGVDAEELAASSSRNAAELFGW 224
>ref|NP_462861.1| (NC_003197) putative hydrolase of PHP superfamily [Salmonella
typhimurium LT2]
gb|AAF33415.1| (AF233324) 82% identity to E. coli hypothetical protein (YIGW)
(SW:P27859); contains similarity to Pfam PF01026 family
(Uncharacterized protein family UPF0006), score=364.7,
E=9.3e-106, N=1 [Salmonella typhimurium LT2]
gb|AAL22820.1| (AE008885) putative hydrolase of PHP superfamily [Salmonella
typhimurium LT2]
Length = 260
Score = 106 bits (264), Expect = 3e-22
Identities = 75/261 (28%), Positives = 127/261 (47%), Gaps = 20/261 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D +L + D ++V+ + GV ++ G ++ + +A++++ ++ + G H
Sbjct: 3 DIGVNLTSSQFAKDRDDVVARAFAAGVKGMLLTGTNIHESQQALKLARRYPHCWSTAGVH 62
Query: 64 PYDVESFD---ESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+D + E + VAIGECGLD+ N + +Q+ F Q++
Sbjct: 63 PHDSSQWSPASEDAIIALANQPEVVAIGECGLDF------NRNFSTPQEQERAFQAQLQI 116
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNADGMLLELS-DR-FYYGIGG- 175
+ + P+ +H R+A L LL + + +LHCF ++ DR Y GI G
Sbjct: 117 AAELQIPIFMHCRDAHERFLVLLDPWLDSLPGAILHCFTGSRQQMQACVDRGLYIGITGW 176
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIAE 230
V + L E+LP IP +LL+ETD+PY LTP P RN P Y+P I ++IA
Sbjct: 177 VCDERRGLELRELLPFIPAEKLLIETDAPYLLPRDLTPKP-TSRRNEPAYLPHILERIAL 235
Query: 231 IINIETEELASLSTHNAQMLF 251
+ + LA+++ NA+ LF
Sbjct: 236 WRGEDPQWLAAMTDANARTLF 256
>ref|NP_219416.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
pir||A71258 conserved hypothetical protein TP0979 - syphilis spirochete
gb|AAC65934.1| (AE001265) conserved hypothetical protein [Treponema pallidum]
Length = 257
Score = 105 bits (263), Expect = 4e-22
Identities = 76/261 (29%), Positives = 131/261 (50%), Gaps = 19/261 (7%)
Query: 4 DTHCHLD--HKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIG 61
DTH H+ H D L V++E+ VT+ + + D E + V+ A+G
Sbjct: 5 DTHAHIGLIHPDPVERLR-VVQEARRASVTRIMSICNSLHDFAAVYETLQFSPSVYHAVG 63
Query: 62 AHPYDVESFDES---LFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
P +V + + +K + + VA+GE GLDY + + K Q +F Q+
Sbjct: 64 VSPSEVMAPGKDWIDTIQKSLQLPQVVALGETGLDYCK------KYGDKRSQIGLFITQL 117
Query: 119 EFSIQHNKPLIIHIREASFDSLNLL-KNYPKAFGVLHCFNADG----MLLELSDRFYYGI 173
+ + + KP+IIH R A D L++L + P GV HC++ D M L+L Y+
Sbjct: 118 DIASKAKKPVIIHNRGAGQDILDILSERIPDQGGVFHCYSEDAEYARMALDLP--VYFSF 175
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
G T++NA+ L E + +P +R+L+E++SP+++P +R RN P + + +AE+++
Sbjct: 176 AGNLTYRNARNLHETVLALPLDRILVESESPFMSPATYRNKRNRPAHTVETVEFMAELLD 235
Query: 234 IETEELASLSTHNAQMLFSFP 254
++ ELA N+ F P
Sbjct: 236 MDMLELADQLWKNSCACFHLP 256
>ref|NP_248591.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58977|YF82_METJA Putative deoxyribonuclease MJ1582
pir||E64497 hypothetical protein homolog MJ1582 - Methanococcus jannaschii
gb|AAB99602.1| (U67598) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 249
Score = 105 bits (263), Expect = 4e-22
Identities = 78/259 (30%), Positives = 138/259 (53%), Gaps = 28/259 (10%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIG 61
++D HCH++ K + + +EV++ + ++ V V GA + RA+E+ +K+ ++ +G
Sbjct: 6 YVDAHCHIEDKAFNKNRDEVIERAKKEDVI-IVTSGASLGGCLRALELRKKYN-IYLTLG 63
Query: 62 AHPYDVESFDESLFEKFVG-----HQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
HP V++ D+ + EK + +AIGE G+D + ENYK +Q+EIF K
Sbjct: 64 YHPSRVKA-DDKVIEKVYNLIKNNEYEILAIGEIGMDI-------KDENYK-RQEEIFKK 114
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIGGV 176
+ + + NKP+++H R ++ K+ K + HC++ D L + + + I +
Sbjct: 115 FLSLAEELNKPIVVHARGFERKIFDIAKD--KVDIMFHCYSGDVELAKEIGKEGHLIS-I 171
Query: 177 STF----KNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEII 232
ST ++ K+LVE L L ETDSPYL+P +GT+N P + L+ ++IA+I
Sbjct: 172 STLVCFSEHHKKLVESLDL---EYLTTETDSPYLSP--IKGTKNEPKNVKLVIEEIAKIK 226
Query: 233 NIETEELASLSTHNAQMLF 251
+E EE+ + N F
Sbjct: 227 EMEVEEVKDVIYKNTCKFF 245
>ref|NP_378039.1| (NC_003106) 242aa long conserved hypothetical protein [Sulfolobus
tokodaii]
dbj|BAB67148.1| (AP000988) 242aa long conserved hypothetical protein [Sulfolobus
tokodaii]
Length = 242
Score = 104 bits (260), Expect = 8e-22
Identities = 74/252 (29%), Positives = 124/252 (48%), Gaps = 15/252 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M +D H H+D KD++ D +++LK K V G D++ +++E+ +K+ V A+
Sbjct: 1 MLVDAHAHIDIKDFDKDRDQILK----KCNIIVVNAGVDLESNLKSLELEKKYSNVIAAV 56
Query: 61 GAHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
G HP V++ L + +K I E GLDY+ + E + + K+ EI ++ +E
Sbjct: 57 GFHPEFVKNKINELDKCLELVEKARIISEVGLDYFWIKE----DELRKKEIEILSRFLEI 112
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYG--IGGVST 178
+ KPLIIH+R D + +L +Y F V+H F +G + G I
Sbjct: 113 GEKEQKPLIIHVRGGFNDLVTILSSYKVKF-VIHAF--EGSIKNAKRVIELGGLISMPPI 169
Query: 179 FKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEE 238
K EI+ + +L ETDSP++ + RN P + L +KIAE+ NI+ +E
Sbjct: 170 LLRDKTRQEIIKNVDLEYILTETDSPFMAHE--KMIRNEPCNVQLTIEKIAELKNIDIQE 227
Query: 239 LASLSTHNAQML 250
+ +N + L
Sbjct: 228 VEKKIENNFKKL 239
>ref|NP_335473.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
gb|AAK45287.1| (AE006987) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 167
Score = 103 bits (256), Expect = 2e-21
Identities = 54/146 (36%), Positives = 88/146 (59%), Gaps = 5/146 (3%)
Query: 110 QKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLK--NYPKAFGVLHCFNADGMLLE--L 165
Q+E F I+ + + KPL+IH R+A D L++L+ P +LHCF++D + +
Sbjct: 16 QREAFAWHIDLAKRTGKPLMIHNRQADRDVLDVLRAEGAPDTV-ILHCFSSDAAMARTCV 74
Query: 166 SDRFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIA 225
+ + G +F+NA+ L E +P +P +LL+ETD+PYLTPHP RG N P +P
Sbjct: 75 DAGWLLSLSGTVSFRNARELREAVPLMPVEQLLVETDAPYLTPHPHRGLANEPYCLPYTV 134
Query: 226 QKIAEIINIETEELASLSTHNAQMLF 251
+ +AE++N EE+A ++T NA+ +
Sbjct: 135 RALAELVNRRPEEVALITTSNARRAY 160
>ref|NP_284651.1| (NC_003116) conserved hypothetical protein [Neisseria meningitidis
Z2491]
pir||H81822 conserved hypothetical protein NMA1946 [imported] - Neisseria
meningitidis (group A strain Z2491)
emb|CAB85166.1| (AL162757) conserved hypothetical protein [Neisseria meningitidis
Z2491]
Length = 284
Score = 99.8 bits (247), Expect = 3e-20
Identities = 75/263 (28%), Positives = 127/263 (47%), Gaps = 23/263 (8%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGA------DMKDLNRAIEISEKFEG 55
F DTHCHL +L +L + E GV + ++P D+ DL + + + +
Sbjct: 28 FTDTHCHLADAALRENLPHILTAAREAGVGRFIVPATRPQDWQDVADLAQRLSENPLWGN 87
Query: 56 VFFAIGAHPY---DVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKE 112
+ A+G HP+ DV D L E+ + +GE GLD+Y + + + +Q +
Sbjct: 88 IHIALGIHPWFSDDVSEPDFQLLEQTLKAHPTAWVGEIGLDFY---DKTQTPPQRERQIQ 144
Query: 113 IFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKA-FGVLHCFNADG----MLLELSD 167
+F +Q+E + + +IIH +A+ D +K A G++H F+ +L +L
Sbjct: 145 VFVRQLEIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHAFSGSAEEARVLTKLG- 203
Query: 168 RFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQK 227
F GIG + NA+++ + L + +LETDSP++ + N+P IP IA+
Sbjct: 204 -FKIGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFM----LKKEINTPANIPGIAKI 258
Query: 228 IAEIINIETEELASLSTHNAQML 250
AEI EE+A ++ NA L
Sbjct: 259 AAEIRGTCVEEIAKVTERNADAL 281
>ref|NP_274691.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||H81053 conserved hypothetical protein NMB1687 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF42035.1| (AE002519) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 256
Score = 97.8 bits (242), Expect = 1e-19
Identities = 73/260 (28%), Positives = 125/260 (48%), Gaps = 20/260 (7%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGA---DMKDLNRAIEISEKFEGVFF 58
F DTHCHL +L +L + + GV + ++P D +D+ E+ + +
Sbjct: 3 FTDTHCHLADPALRENLPHILTAARKVGVKRFIVPATRPQDWQDVADLAEMPSEHGQIRI 62
Query: 59 AIGAHPYDVESFDESLF---EKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFT 115
A+G HP+ + E F E + H +GE GLD+Y + + + +Q ++F
Sbjct: 63 ALGIHPWFSDGIAERDFVRLETMLAHYPQAWVGEIGLDFY---DKTQTSQQRERQIQVFV 119
Query: 116 KQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKA-FGVLHCFNADG----MLLELSDRFY 170
+Q+E + + +IIH +A+ D +K A G++H F+ +L +L F
Sbjct: 120 RQLEIAQTLRRRVIIHNLKATADIAAAVKQTGFAQGGIVHAFSGSAEEARVLTKLG--FK 177
Query: 171 YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
GIG + NA+++ + L + +LETDSP++ + N+P IP IA+ AE
Sbjct: 178 IGIGSLLLNPNARKVRDTLKALNDGDFVLETDSPFM----LKKEINTPANIPGIAKIAAE 233
Query: 231 IINIETEELASLSTHNAQML 250
I EE+A ++ NA L
Sbjct: 234 IRGTCVEEIAKVTERNADAL 253
>ref|NP_251556.1| (NC_002516) secretion protein MttC [Pseudomonas aeruginosa]
pir||G83286 secretion protein MttC PA2866 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG06254.1|AE004713_3 (AE004713) secretion protein MttC [Pseudomonas aeruginosa]
Length = 267
Score = 97.1 bits (240), Expect = 2e-19
Identities = 71/267 (26%), Positives = 127/267 (46%), Gaps = 21/267 (7%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEI-SEKFEG--VFFA 59
ID +L H + + E +L + GV Q VI G + D +A+++ E EG +F
Sbjct: 4 IDIGVNLTHASFAPEREALLARARAAGVVQMVITGTSLADSEQALQLCGELDEGGRLFTT 63
Query: 60 IGAHPYDVESFDESL---FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
G HP++ ++ + A+GECGLD+ N + + Q++ +
Sbjct: 64 AGVHPHEASHWNADTARGLRALFDDPRVRAVGECGLDF------NRDFSPRPAQEKALEE 117
Query: 117 QIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNADGMLLE--LSDRFYYG 172
Q+ +++ +P+ +H R+AS L +L+++ + V+HCF + L L + G
Sbjct: 118 QLALAVELQRPVFLHERDASERLLAILRDFRERLPAAVVHCFTGERRALYGYLDLDLHIG 177
Query: 173 IGG-VSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFR----GTRNSPTYIPLIAQK 227
I G ++ + L +++ +IP RL+LE+D+PYL P R RN P Y+ +
Sbjct: 178 ITGWINDERRGTHLHDLVGEIPVGRLMLESDAPYLLPRSLRPKPKNGRNEPAYLVEVLDC 237
Query: 228 IAEIINIETEELASLSTHNAQMLFSFP 254
+A E LA+ ++ A+ F P
Sbjct: 238 VARHRGESAERLAAHTSAAARAFFGLP 264
>ref|NP_055575.1| (NM_014760) KIAA0218 gene product [Homo sapiens]
sp|Q93075|Y218_HUMAN Putative deoxyribonuclease KIAA0218
dbj|BAA13208.1| (D86972) similar to E.coli hypothetical 29.6 KD
protein(P1:YIGW_ECOLI) [Homo sapiens]
Length = 761
Score = 95.9 bits (237), Expect = 4e-19
Identities = 73/261 (27%), Positives = 118/261 (44%), Gaps = 32/261 (12%)
Query: 2 FIDTHCHLD-------HKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAI-EISEKF 53
FIDTHCHLD + ++ S K C+ D + L + E K
Sbjct: 495 FIDTHCHLDMLYSKLSFQGTFTKFRKIYSSSFPKEFQGCISDFCDPRTLTDCLWEELLKE 554
Query: 54 EGVFFAIGAHPYDVESFDESLFEKFVG---HQKCVAIGECGLDYYRLPELNERENYKS-- 108
+ V+ A G HP+ + ES + H K VA GE GLDY +YK
Sbjct: 555 DLVWGAFGCHPHFARYYSESQERNLLQALRHPKAVAFGEMGLDY----------SYKCTT 604
Query: 109 ---KQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNY-PKAFGV-LHCFNADGMLL 163
+Q ++F +Q++ ++ KPL+IH REA D L ++K + P + + HCF ++
Sbjct: 605 PVPEQHKVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHRHCFTGSYPVI 664
Query: 164 ELSDRFY----YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPT 219
E +++ G V T+ +A E L +IP R+++ETD+PY P +
Sbjct: 665 EPLLKYFPNMSVGFTAVLTYSSAWEAREALRQIPLERIIVETDAPYFLPRQVPKSLCQYA 724
Query: 220 YIPLIAQKIAEIINIETEELA 240
+ L + EI ++ + L+
Sbjct: 725 HPGLALHTVREIARVKDQPLS 745
>ref|NP_341622.1| (NC_002754) Conserved hypothetical protein [Sulfolobus
solfataricus]
gb|AAK40412.1| (AE006646) Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 247
Score = 95.1 bits (235), Expect = 6e-19
Identities = 74/261 (28%), Positives = 128/261 (48%), Gaps = 29/261 (11%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
M +D+H H+D K+++ D E V+ E V G D + +E+++K++ + AI
Sbjct: 1 MLVDSHAHIDVKEFDMDREFVINECQ----ILIVNAGVDFQSNLHTLELAKKYKNIIPAI 56
Query: 61 GAHPYDVESFDESLFEKFVGHQKCVA-------IGECGLDYYRLPELNERENYKSKQKEI 113
G HP E + +K KC+ I E GLDY+ + + E+ + KQ E+
Sbjct: 57 GFHP-------EFVKDKVNEIDKCLELTRYGKIISEVGLDYFWIKD----EDLRKKQIEV 105
Query: 114 FTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYG- 172
K ++ + + NKP+IIHIR D L ++ +Y F V+H F +G + + YG
Sbjct: 106 LEKFLQIAEKENKPVIIHIRGGMKDFLEIINSYRIRF-VIHSF--EGSVKIANKVIEYGG 162
Query: 173 -IGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEI 231
I K ++ +IP + +L ETDSP++ P + +RN P + ++ ++I+ +
Sbjct: 163 LISIPPIIVRDKVRQKVAKEIPLDFILTETDSPFMGPE--KMSRNKPCNVKIVVKQISLL 220
Query: 232 INIETEELASLSTHNAQMLFS 252
IE E+ N LF+
Sbjct: 221 KRIEEIEIEEKIYKNFVSLFT 241
>ref|NP_610248.1| (NM_136404) CG3358 gene product [Drosophila melanogaster]
gb|AAF57413.1| (AE003790) CG3358-PA [Drosophila melanogaster]
gb|AAM52667.1| (AY122155) LD08659p [Drosophila melanogaster]
gb|AAM70836.1| (AE003790) CG3358-PB [Drosophila melanogaster]
Length = 291
Score = 94.7 bits (234), Expect = 8e-19
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 34/243 (13%)
Query: 7 CHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAHPYD 66
C+ + +E DL VL+ + ++G+ + ++ +KD++ A+E++ K E ++ +G HP
Sbjct: 5 CYGGTQKHEPDLHIVLERAWQQGLQKVIVTAGCLKDVDEALELASKDERIYTTVGTHPTR 64
Query: 67 VESF---DESLFEKF-----VGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
E F E +++ K A+GECGLDY RL + Q+ F KQ+
Sbjct: 65 CEEFVPDPEGYYDQLRSRIKANRTKVRAVGECGLDYDRLHFCAQ-----ETQRLYFEKQL 119
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNYPKAF-----GVLHCFNADGMLLELSDR----- 168
+ + + PL +H+R A+ D + +L+ GV+H F LE + R
Sbjct: 120 DLAAEFKLPLFLHMRNAAEDFMGILERNRNKIEECGGGVVHSFTG---TLEEAQRILAFG 176
Query: 169 -FYYGIGGVS--TFKNAKRLVEILPKIPKNRLLLETDSPYLTPHP-FRGTRNSPTYIPLI 224
Y G G S T +NA E++ K+P +R++LETD P+ P G ++ T P +
Sbjct: 177 GLYIGFNGCSLKTDENA----EVVRKLPNDRIMLETDCPWCGIRPSHAGHKHVTTKFPTV 232
Query: 225 AQK 227
+K
Sbjct: 233 KKK 235
>emb|CAA69984.1| (Y08729) hypothetical protein [Acidianus ambivalens]
Length = 243
Score = 94.7 bits (234), Expect = 8e-19
Identities = 69/258 (26%), Positives = 124/258 (47%), Gaps = 24/258 (9%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFF-A 59
M ID H HL+ + ++ ++E+L + K + G D+ +E++ ++ + + A
Sbjct: 1 MLIDIHAHLNSDELKDKIDEILSKCNIKIINA----GVDLHSDLETLELARIYKDIVYPA 56
Query: 60 IGAHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIE 119
IG HP +E ++ + + K +AI E GLDYY + + E + K+ E+ + +E
Sbjct: 57 IGFHPEYIEKAEKEVDKILPLIDKAMAISEVGLDYYWIKD----EKLRKKEIEVLSTFLE 112
Query: 120 FSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIGGVSTF 179
+ KP+I+HIR D L L+ +Y F ++H F + R +GG +F
Sbjct: 113 IGEKRRKPVILHIRGGMSDFLQLISSYKLTF-IIHAFEGSIKIA----RKILDLGGYLSF 167
Query: 180 ------KNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
N +R +I ++P +RL ETDSP+L P +G N P + + +++ I
Sbjct: 168 PPIIVRDNLRR--QIAKEVPLDRLFTETDSPFLGPE--KGKINEPCNVSITLSELSIIKG 223
Query: 234 IETEELASLSTHNAQMLF 251
+ EE+ N +F
Sbjct: 224 LGKEEIEKQIEKNFYRVF 241
>gb|EAA11869.1| (AAAB01008960) agCP6279 [Anopheles gambiae str. PEST]
Length = 312
Score = 92.8 bits (229), Expect = 3e-18
Identities = 72/228 (31%), Positives = 115/228 (49%), Gaps = 21/228 (9%)
Query: 14 YENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAHPY-------D 66
+E DL VL+ S G+ + +I + D EI + E +F +G HP D
Sbjct: 37 HEPDLPHVLERSWTGGLDKIIITVGTLADCAPTFEIVKNDERLFATVGCHPTRCGEFVPD 96
Query: 67 VESFDESLFEKFVGH-QKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHN 125
E + SL ++ H +K VAIGECGLDY RL + K+ Q++ F KQ+E + +++
Sbjct: 97 PEGYFASLCQQIEQHREKVVAIGECGLDYDRLQFCD-----KAIQQQYFEKQLELAARYD 151
Query: 126 KPLIIHIREASFDSLNLL-KNYPK--AFGVLHCFNADGMLLE--LSDRFYYGIGGVSTFK 180
PL +H R A D + +L +N K GV+H F+ + E ++D + GI G S
Sbjct: 152 LPLFLHCRNAHDDFVAILQRNRDKLPRRGVVHTFDGSLEVAEALIADGYAIGINGCSL-- 209
Query: 181 NAKRLVEILPKIPKNRLLLETDSPYLTPHP-FRGTRNSPTYIPLIAQK 227
+ + + KIP ++LETDSP+ P G++ + P + +K
Sbjct: 210 KTEENLSVAAKIPDASIMLETDSPWCEIRPSHAGSKYVRSKYPTVKKK 257
>ref|NP_578588.1| (NC_003413) hypothetical protein [Pyrococcus furiosus DSM 3638]
gb|AAL80983.1| (AE010201) hypothetical protein [Pyrococcus furiosus DSM 3638]
Length = 252
Score = 90.5 bits (223), Expect = 2e-17
Identities = 72/264 (27%), Positives = 129/264 (48%), Gaps = 26/264 (9%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEK--GVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
ID H H++ ++ + EE+++E+ K GV + + + F+ +F +
Sbjct: 2 IDAHAHIEF--FKKNQEEIIEEAKRKLRGVVDSITEYRKTHVWKSWELLKDYFDFIFPTL 59
Query: 61 GAHPYDVESFDESLFEK----FVGHQKCV-AIGECGLDYYRLPELNERENYKSKQKEIFT 115
G HP + + K + HQK + IGE GLDYY ER+ Q+EIF
Sbjct: 60 GYHPNEARRGNWEKVRKVEDFILKHQKEIFGIGEIGLDYYHAKTKAERD----AQREIFV 115
Query: 116 KQIEFSIQHNKPLIIHIREASFDSLNLLKNY--PKAFGVLHCFNADGMLLELSDRFYYG- 172
+E + + N P++IH REA ++L ++ Y P F H + +E++ G
Sbjct: 116 HFLELAKELNLPVVIHAREAEKEALEIINRYDIPSYF---HSYTGS---VEVAREIVDGG 169
Query: 173 -IGGVST-FKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAE 230
I G+ST + E+ I L++ETD+PY++ P++G RN P ++ + +++A+
Sbjct: 170 HILGISTGIVFIPEVREVAKNIEIEYLVVETDAPYMS--PYKGIRNKPIFVEVAIEELAK 227
Query: 231 IINIETEELASLSTHNAQMLFSFP 254
I ++ E+ +++ N FS P
Sbjct: 228 IKGMDKTEVEAVTEVNTIKFFSLP 251
>ref|NP_568352.1| (NM_121763) putative protein [Arabidopsis thaliana]
Length = 325
Score = 90.1 bits (222), Expect = 2e-17
Identities = 77/298 (25%), Positives = 120/298 (39%), Gaps = 52/298 (17%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D HCHL +++ ++ GV+ + G KD + E+ K+ V G H
Sbjct: 5 DAHCHLQDPRIITKAPQIISSAVASGVSAFAVNGVSEKDWSLVKEMGAKYPSVVPCFGIH 64
Query: 64 PYDVESFDESLFE---KFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+ V FE F A+GE GLD RE S+Q +F +Q+E
Sbjct: 65 PWYVAERSPQWFETLKSFFETTPTAAVGEIGLD----KGSKGREIDFSEQVTVFRQQLEL 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNY-PKAFGV-LHCFNADGMLLELSDRF--YYGIGGV 176
+ + KP +H A D L +LK+ P GV LH + ++ + Y+ G
Sbjct: 121 AKELKKPASVHCVRAFGDLLEILKSVGPFPSGVMLHSYLGSAEMVPEFAKLGAYFSFSGF 180
Query: 177 STFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRG----------------------- 213
+ K+ ++L +P +R+LLETDSP P G
Sbjct: 181 LMSMSEKKAKKMLKAVPSDRILLETDSPDALPKAESGCLYFVDGDPSLPEEGNSAQDLDS 240
Query: 214 ------------------TRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLFSF 253
T N P I ++ +A++++++ EELA LS NA LFS+
Sbjct: 241 ASYDKPNVSSDSMKLTKETLNHPANIHIVLGYVAQLLDMKNEELAELSYQNAVRLFSY 298
>ref|NP_126742.1| (NC_000868) hypothetical protein [Pyrococcus abyssi]
pir||H75083 hypothetical protein PAB0707 - Pyrococcus abyssi (strain Orsay)
emb|CAB49973.1| (AJ248286) hypothetical protein [Pyrococcus abyssi]
Length = 253
Score = 88.2 bits (217), Expect = 8e-17
Identities = 66/260 (25%), Positives = 125/260 (47%), Gaps = 18/260 (6%)
Query: 3 IDTHCHLDHKDYENDLEEVLKE--SLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
ID H HL+ Y+ + E ++++ S K + + + F +F +
Sbjct: 2 IDAHAHLEF--YKKEAEAIIEKARSRMKAIVDSITEYRKFHVWKSWEMLKPYFGFLFPTL 59
Query: 61 GAHPYDVESFD----ESLFEKFVGHQKCV-AIGECGLDYYRLPELNERENYKSKQKEIFT 115
G HP + + + E + H+K + AIGE GLDYY ER N Q+EIF
Sbjct: 60 GYHPNEARRGNWEKVRKVEEFILDHKKEIYAIGEIGLDYYHAKTEVERRN----QEEIFR 115
Query: 116 KQIEFSIQHNKPLIIHIREASFDSLNLLKNYP-KAFGVLHCFNADGMLLELSDRFYYGIG 174
+ + + P++IH REA +L +L+N+ KA+ H + + + +G
Sbjct: 116 HFLTLAEELKLPVVIHAREAEDVALRILQNFDVKAY--FHSYTGPVKVAREIVENGHFVG 173
Query: 175 GVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINI 234
V+ + ++ + +L+ETDSPY++P ++G +N P ++ ++ ++A+I +
Sbjct: 174 IVTGITFIPEVRDVARALELENILVETDSPYMSP--YKGVKNKPWFVEVVINELAKIKEV 231
Query: 235 ETEELASLSTHNAQMLFSFP 254
EE+ +++ NA++ F P
Sbjct: 232 PREEVEAITERNAKVFFGLP 251
>ref|NP_114415.1| (NM_032026) CDA11 protein [Homo sapiens]
gb|AAK14933.1|AF212250_1 (AF212250) CDA11 [Homo sapiens]
Length = 297
Score = 87.8 bits (216), Expect = 1e-16
Identities = 64/208 (30%), Positives = 111/208 (52%), Gaps = 26/208 (12%)
Query: 14 YENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA-IGAHPYDVESFDE 72
+++DL++V+ ++E GV + +I G +++D A+ +++ G+FF+ +G HP F++
Sbjct: 28 HQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEK 86
Query: 73 SLFEKFV---------GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQ 123
+ + ++ K VAIGECGLD+ RL K Q + F KQ E S Q
Sbjct: 87 NNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCP-----KDTQLKYFEKQFELSEQ 141
Query: 124 HNKPLIIHIREASFDSLNLLK-NYPKAF-GVLHCFN----ADGMLLELSDRFYYGIGGVS 177
P+ +H R + + L+++K N + GV+H F+ A L++L Y G G S
Sbjct: 142 TKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLD--LYIGFNGCS 199
Query: 178 TFKNAKRLVEILPKIPKNRLLLETDSPY 205
A +E+L IP +L++ETD+P+
Sbjct: 200 LKTEAN--LEVLKSIPSEKLMIETDAPW 225
>ref|NP_190807.1| (NM_115099) putative protein [Arabidopsis thaliana]
pir||T08460 hypothetical protein F22O6.230 - Arabidopsis thaliana
emb|CAB43446.1| (AL050300) putative protein [Arabidopsis thaliana]
Length = 299
Score = 85.9 bits (211), Expect = 4e-16
Identities = 61/189 (32%), Positives = 93/189 (48%), Gaps = 24/189 (12%)
Query: 34 VIPGADMKDLNRAIEISEKFEGVFFAIGAHPYDVESFDES------------LFEKFVGH 81
++ G +++ A+ I+E +F +G HP F+ES L ++ +
Sbjct: 34 IVTGGSLEESREALAIAETDGRLFCTVGVHPTRCNEFEESGDPEKHYQALFSLAKEGMQK 93
Query: 82 QKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLN 141
K VAIGECGLDY RL + QK+ F KQ E + P+ +H+R A+ D
Sbjct: 94 GKVVAIGECGLDYDRLQFCS-----VDIQKKYFEKQFELAYATKLPMFLHMRAAAEDFCE 148
Query: 142 LLKNYPKAF--GVLHCFN---ADGMLLELSDRFYYGIGGVSTFKNAKRLVEILPKIPKNR 196
+++ F GV H F +D L D+ Y G+ G S K A+ L E++ IP R
Sbjct: 149 IVERNKNRFTGGVAHSFTGSASDRDKLLSFDKMYLGVNGCS-LKTAENL-EVMKGIPVER 206
Query: 197 LLLETDSPY 205
+++ETDSPY
Sbjct: 207 MMIETDSPY 215
>ref|NP_438254.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P44500|YJJV_HAEIN Putative deoxyribonuclease HI0081
pir||A64142 hypothetical protein HI0081 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC21756.1| (U32693) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 262
Score = 84.7 bits (208), Expect = 9e-16
Identities = 69/265 (26%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 2 FIDTHCHLDHKDY--ENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKF-EGVFF 58
F DTH HL++ L +++ + + V + ++ D ++ F + + +
Sbjct: 3 FFDTHTHLNYLQQFTGEPLSQLIDNAKQADVQKILVVAVKEADFKTIQNMTALFPDNLCY 62
Query: 59 AIGAHPYDVESFDES---LFEKFVGHQ--KCVAIGECGLDYYRLPELNERENYKSKQKEI 113
+G HP ++ E+ L E+ + ++ C A+ E GL+ +P+L E + +KQ
Sbjct: 63 GLGLHPLYIQEHAENDLILLEQALKNRDTNCTAVAEIGLER-AIPDLLTDELW-AKQCHF 120
Query: 114 FTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKA-FGVLHCFNADGMLLELSDRFY-- 170
F Q+ + Q N P+ IH R+ LK P + GV+H F+ + + RF
Sbjct: 121 FESQLYLAKQFNLPVNIHSRKTHDQIFTFLKRIPLSKLGVVHGFSGS---YDQAKRFVDL 177
Query: 171 ---YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQK 227
G+GG T++ A + + + K+P + L+LETDSP + F+G N P I +
Sbjct: 178 GYKIGVGGTITYERANKTRQAIAKLPLDALVLETDSPDMPVFGFQGQPNRPERIVESFKA 237
Query: 228 IAEIINIETEELASLSTHNAQMLFS 252
+ + N E + L+ NA +FS
Sbjct: 238 LCTLRNEPAELIKKLTWENACQIFS 262
>ref|NP_143104.1| (NC_000961) hypothetical protein [Pyrococcus horikoshii]
pir||B71064 hypothetical protein PH1208 - Pyrococcus horikoshii
dbj|BAA30308.1| (AP000005) 250aa long hypothetical protein [Pyrococcus horikoshii]
Length = 250
Score = 84.0 bits (206), Expect = 1e-15
Identities = 68/259 (26%), Positives = 127/259 (48%), Gaps = 20/259 (7%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEK--GVTQCVIPGADMKDLNRAIEISEKFEGVFF-A 59
ID H HL+ Y+ D E ++ E+ EK G+ + + ++ E+ + + G +
Sbjct: 2 IDAHAHLEF--YKRDYESIIGEAKEKLDGIIDSITEYRKAH-VWKSWELLKGYFGFLYPT 58
Query: 60 IGAHPYDVESFD---ESLFEKFVGHQK--CVAIGECGLDYYRLPELNERENYKSKQKEIF 114
+G HP + + + E+F+ K IGE GLDYY EREN Q+ IF
Sbjct: 59 LGYHPNEAKRGNWEKVKRVEEFILEHKDEIYGIGEIGLDYYHAKTSKEREN----QRIIF 114
Query: 115 TKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLL-ELSDRFYYGI 173
+ + + P++IH R A ++ N+++ + H + L E+S+ ++ I
Sbjct: 115 EHFLNIAQELRLPVVIHARMAEREAFNIIQKFD-VNAYFHSYTGPVELAKEISENGHF-I 172
Query: 174 GGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIIN 233
G V+ + ++ K+ LL ETDSPY++P ++G +N P ++ ++ +++++I
Sbjct: 173 GIVTGIVFIPEVRKVAEKMDIEGLLAETDSPYMSP--YKGIKNKPWFVKIVLEELSKIKE 230
Query: 234 IETEELASLSTHNAQMLFS 252
I EE+ + N + FS
Sbjct: 231 IPIEEVEEIIDGNIKKFFS 249
>ref|NP_219431.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
pir||C71255 conserved hypothetical protein TP0994 - syphilis spirochete
gb|AAC26582.1| (AE001267) conserved hypothetical protein [Treponema pallidum]
Length = 269
Score = 81.6 bits (200), Expect = 7e-15
Identities = 62/184 (33%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 86 AIGECGLD-YYRLPELNERENYKS---------KQKEIFTKQIEFSIQHNKPLIIHIREA 135
A+GECGLD ++ P++ + S ++ +F Q+ + N PLIIH R+A
Sbjct: 69 ALGECGLDRHWNGPQVACKARKGSGVRGTPDLDAEEYLFKAQLSIAKAQNLPLIIHSRDA 128
Query: 136 SFDSLNLLKNYPKAFGVLHCFNADGMLLE--LSDRFYYGIGGVSTFKNAKRLVEILPK-- 191
+L L + GV+HCF+ + L Y G T+ AK E+L +
Sbjct: 129 FEPTLRCLDSVGWRKGVMHCFSYGVVEAHAFLERGLYISCAGTLTY--AKTTSELLARDA 186
Query: 192 ----IPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELASLSTHNA 247
IP +RLLLETD+PYL P P RGT N P Y+ +A I+ I + LA N
Sbjct: 187 LIRSIPLDRLLLETDTPYLAPVPHRGTHNRPEYVRHTYALVANILGISEKALAQHVFANC 246
Query: 248 QMLF 251
LF
Sbjct: 247 CALF 250
>ref|NP_595590.1| (NC_003423) hypothetical protein; TatD_DNase family
[Schizosaccharomyces pombe]
pir||T39700 hypothetical protein SPAC17A3.08 - fission yeast
(Schizosaccharomyces pombe)
emb|CAB51767.1| (AL109652) hypothetical protein; TatD_DNase family
[Schizosaccharomyces pombe]
Length = 312
Score = 81.6 bits (200), Expect = 7e-15
Identities = 77/293 (26%), Positives = 123/293 (41%), Gaps = 58/293 (19%)
Query: 6 HCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAHPY 65
H L H D D + ++ + GV + +I G ++++ A+ ++ +E +G HP
Sbjct: 31 HEKLKHPD---DFDSIISRAKAVGVEKMMITGDNVENSEEALNLATNYECFTSTVGVHPC 87
Query: 66 DVESFD-------------ESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKE 112
+ F E+L K K VA GE GLDY RL QK
Sbjct: 88 QAQCFLRHSEGPEDYLVKLEALANKGKASGKVVAFGEFGLDYDRLHYAPA-----DVQKM 142
Query: 113 IFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNY----PKAFGVLHCF--NADGMLLELS 166
F +Q++ +++ PL +H R A D +L+ Y PK GV+H F + D M +
Sbjct: 143 YFEEQLKVAVRVQLPLFLHSRNAENDFFAILEKYLPELPKK-GVVHSFTGSIDEMRRCIE 201
Query: 167 DRFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHP---------------- 210
Y G+ G S + +E++ IP ++LLETD+P+ P
Sbjct: 202 HGLYVGVNGCSL--KTEENLEVVRAIPLEKMLLETDAPWCEVRPSHAGHQFLKTKLPFDS 259
Query: 211 -----------FRGTRNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLFS 252
RG RN P ++A+ +A + +I EEL+ N+ L S
Sbjct: 260 CKKERFKEGCMIRG-RNEPCNTYIVAEIVAALKDISLEELSEQIWENSINLLS 311
>pir||T51461 hypothetical protein K10A8_50 - Arabidopsis thaliana
emb|CAC01901.1| (AL391151) putative protein [Arabidopsis thaliana]
Length = 318
Score = 80.9 bits (198), Expect = 1e-14
Identities = 75/291 (25%), Positives = 120/291 (40%), Gaps = 45/291 (15%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D HCHL +++ ++ GV+ + G KD + E+ K+ V G H
Sbjct: 5 DAHCHLQDPRIITKAPQIISSAVASGVSAFAVNGVSEKDWSLVKEMGAKYPSVVPCFGIH 64
Query: 64 PYDVESFDESLFE---KFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+ V FE F A+GE GLD RE S+Q +F +Q+E
Sbjct: 65 PWYVAERSPQWFETLKSFFETTPTAAVGEIGLD----KGSKGREIDFSEQVTVFRQQLEL 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNY-PKAFGV-LHCFNADGMLLELSDRF--YYGIGGV 176
+ + KP +H A D L +LK+ P GV LH + ++ + Y+ G
Sbjct: 121 AKELKKPASVHCVRAFGDLLEILKSVGPFPSGVMLHSYLGSAEMVPEFAKLGAYFSFSGF 180
Query: 177 STFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRG-------------------TRNS 217
+ K+ ++L +P +R+LLETDSP P G +S
Sbjct: 181 LMSMSEKKAKKMLKAVPSDRILLETDSPDALPKAESGCLYFVDGDPSLPEEGNSAQDLDS 240
Query: 218 PTY----IPLIAQKIAE-----------IINIETEELASLSTHNAQMLFSF 253
+Y + + K+ + +++++ EELA LS NA LFS+
Sbjct: 241 ASYDKPNVSSDSMKLTKETLNHPANIHILLDMKNEELAELSYQNAVRLFSY 291
>ref|XP_167403.1| (XM_167403) hypothetical protein XP_167403 [Homo sapiens]
Length = 297
Score = 80.5 bits (197), Expect = 2e-14
Identities = 59/207 (28%), Positives = 104/207 (49%), Gaps = 24/207 (11%)
Query: 14 YENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAHPYDVESFDES 73
+++DL++V ++E GV + +I G +++D A+ +++ F G HP F+++
Sbjct: 28 HQDDLQDVTGRAVEIGVKKFMITGGNLQDSKDALHLAQTNHMFFSTAGCHPTRCGKFEKN 87
Query: 74 LFEKFV---------GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQH 124
+ ++ K VA+GECGLD+ RL K Q + KQ E S Q
Sbjct: 88 NPDLYLKELLNLDENNKGKVVAVGECGLDFDRLHFCP-----KDTQLKYCEKQFELSEQT 142
Query: 125 NKPLIIHIREASFDSLNLLK-NYPKAF-GVLHCFN----ADGMLLELSDRFYYGIGGVST 178
P+ +H R + + L+++K N + GV+H F+ A L++L Y G G S
Sbjct: 143 KLPMFLHCRNSHAEFLDIIKRNRDRCVEGVVHSFDGTKEAAAALIDLD--LYIGFNGCSL 200
Query: 179 FKNAKRLVEILPKIPKNRLLLETDSPY 205
+ +E+L IP +L++ETD+P+
Sbjct: 201 --KTETNLEVLKSIPSEKLMIETDAPW 225
>pir||S56602 yjjV protein - Escherichia coli
gb|AAA97274.1| (U14003) ORF_o211 [Escherichia coli]
gb|AAC77331.1| (AE000508) orf, hypothetical protein [Escherichia coli K12]
Length = 211
Score = 79.0 bits (193), Expect = 5e-14
Identities = 57/220 (25%), Positives = 107/220 (47%), Gaps = 22/220 (10%)
Query: 47 IEISEKFEGVFFAIGAHPYDVESFDESLFEKFVGH-----QKCVAIGECGLDYYRLPELN 101
+ ++E ++ ++ A+G HP +E + E+ K VA+GE GLD +
Sbjct: 2 LALAENYQPLYAALGLHPGMLEKHSDVSLEQLQQALERRPAKVVAVGEIGLDLFGDDPQF 61
Query: 102 ERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNY--PKAFGVLHCFNAD 159
ER+ + + +Q++ + +++ P+I+H R LK + P+ GV+H F+
Sbjct: 62 ERQQW------LLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLPRT-GVVHGFSGS 114
Query: 160 GMLLELSDRFYY-----GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGT 214
L+ ++RF G+GG T+ A + +++ K+P LLLETD+P + + F+G
Sbjct: 115 ---LQQAERFVQLGYKIGVGGTITYPRASKTRDVIAKLPLASLLLETDAPDMPLNGFQGQ 171
Query: 215 RNSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLFSFP 254
N P + + E+ +E+A +N LF+ P
Sbjct: 172 PNRPEQAARVFAVLCELRREPADEIAQALLNNTYTLFNVP 211
>ref|NP_245879.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK03026.1| (AE006134) unknown [Pasteurella multocida]
Length = 263
Score = 79.0 bits (193), Expect = 5e-14
Identities = 63/265 (23%), Positives = 124/265 (46%), Gaps = 19/265 (7%)
Query: 2 FIDTHCHLDHKDYEND--LEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKF-EGVFF 58
F DTH HLD+ E L ++++++ + V + ++ G + + +++ + E +++
Sbjct: 3 FFDTHIHLDYLQQETGETLAQLVEQAQQANVQKMLMVGVSSEHIVTLTQMATAYPESLYY 62
Query: 59 AIGAHPY--------DVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQ 110
+G HP D+E ++L ++ C A+ E GL+ +P+L + KQ
Sbjct: 63 GVGLHPLYIRQHTYADLEKLQQTLDKRL---SNCCAVAEIGLER-AVPDLLN-DGLWEKQ 117
Query: 111 KEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAF-GVLHCFNAD-GMLLELSDR 168
Q+ + Q+ + +H R+A + L+ G++H F+ + D
Sbjct: 118 CAFLEAQLVLAKQYGLAVSLHSRKAHDQLVPFLRYISSPMCGIIHGFSGSYQQAVRFVDL 177
Query: 169 FY-YGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQK 227
Y G+GG T+ A + +++ ++P + L+LETD+P + F+G N P I I
Sbjct: 178 GYKIGVGGTITYLRANKTRDVIRRLPLDCLVLETDAPDMPVFGFQGQANRPERIVNIFAH 237
Query: 228 IAEIINIETEELASLSTHNAQMLFS 252
+ E+ EE+ + N+ LFS
Sbjct: 238 LCELRAERPEEIKQVIWQNSCKLFS 262
>ref|NP_507534.1| (NM_075133) Y37H2A.1.p [Caenorhabditis elegans]
emb|CAB60573.1| (AL132863) contains similarity to Pfam domain: PF01026
(Metalloenzyme of unknown function), Score=147.1,
E-value=1e-40, N=1~cDNA EST yk62f12.5 comes from this
gene~cDNA EST yk411g6.5 comes from this gene~cDNA EST
yk608a3.3 comes from this gene~cDNA EST>
Length = 477
Score = 76.3 bits (186), Expect = 3e-13
Identities = 80/303 (26%), Positives = 126/303 (41%), Gaps = 59/303 (19%)
Query: 2 FIDTHCHLD-------HKDYENDLEEVLKESLEK----------GVTQCVIP-------- 36
FID+HCH+D H + + L L + + GV I
Sbjct: 176 FIDSHCHVDFMYNQMVHNNPNSSLSHGLSHWIHRYPYGFPKSFYGVIANFIKPSLFVVND 235
Query: 37 --GADMKDLNRAIEISEKFEGVFFAIGAHP-YDVESFDESLFEKFVGH-------QKCVA 86
G + D++ I E + G HP Y E + +F + + H K +A
Sbjct: 236 GGGGNGYDIDWIINEIESNIYLGTTWGCHPHYAQEWASKDIFWQTLEHILSNAATWKVLA 295
Query: 87 IGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIRE-----ASFDSLN 141
+GECGLD +R +++ E QK +F K I+ + ++ PL+IH R A L
Sbjct: 296 VGECGLDLHRC--ISDLE----VQKMVFEKHIDLAYKYQLPLVIHCRSGQKGRAEEQCLR 349
Query: 142 LLK-----NYPKAFGVLHCFNADG----MLLELSDRFYYGIGGVSTFKNAKRLVEILPKI 192
+LK N+ HCF M ++ Y+G ++ +E + I
Sbjct: 350 ILKKKMDENHKFLKIHRHCFTETWEVAQMWMKQCPNVYFGYTAAIFKMRERQQLEAIRHI 409
Query: 193 PKNRLLLETDSPYLTPHPFRGTRNSPTYIP----LIAQKIAEIINIETEELASLSTHNAQ 248
P NR+LLETD+PY P F G +P A+KIAEI + +E+ + N +
Sbjct: 410 PLNRILLETDAPYFRPPCFEGVGPRNVCLPGMAIATARKIAEIKELPVDEVLRATFDNTR 469
Query: 249 MLF 251
+L+
Sbjct: 470 LLY 472
>ref|NP_493691.1| (NM_061290) B0432.8.p [Caenorhabditis elegans]
pir||T25456 hypothetical protein B0432.8 - Caenorhabditis elegans
gb|AAB37894.1| (U80836) Hypothetical protein B0432.8 [Caenorhabditis elegans]
Length = 364
Score = 74.7 bits (182), Expect = 9e-13
Identities = 55/188 (29%), Positives = 97/188 (51%), Gaps = 15/188 (7%)
Query: 78 FVGHQK-CVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLI------- 129
FV H++ + +GECGLD+ E+++ +Q+ +F QI+ + KPLI
Sbjct: 180 FVEHERDIICVGECGLDHTISQFKLTTEDFE-EQETVFKWQIDLAKHFEKPLILEIPDIS 238
Query: 130 --IHIREASFDSLNLLKNYPKAFG--VLHCFNADGMLLELSDRFYYGIGGVSTFKNAKRL 185
+H R A+ ++ +L A VLH F+ L+L Y +F ++
Sbjct: 239 RNVHSRSAARRTIEILLECHVAPDQVVLHAFDGTPGDLKLGLEAGYLFSIPPSFGKSEET 298
Query: 186 VEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEELASLSTH 245
+++ IP ++LLLETDSP L P +G +N P + + A+ +A+I +E +++ S ++
Sbjct: 299 TQLIESIPLSQLLLETDSPALGPE--KGCKNVPANLRISAEIVAKIKKLEIDDIISATST 356
Query: 246 NAQMLFSF 253
NA +F F
Sbjct: 357 NANRIFKF 364
>gb|AAL61823.1| (AY071865) hepatocarcinoma high expression protein [Homo sapiens]
Length = 250
Score = 74.3 bits (181), Expect = 1e-12
Identities = 58/188 (30%), Positives = 96/188 (50%), Gaps = 26/188 (13%)
Query: 34 VIPGADMKDLNRAIEISEKFEGVFFA-IGAHPYDVESFDESLFEKFV---------GHQK 83
+I G +++D A+ +++ G+FF+ +G HP F+++ + ++ K
Sbjct: 1 MITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGK 59
Query: 84 CVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLL 143
VAIGECGLD+ RL K Q + F KQ E S Q P+ +H R + + L+++
Sbjct: 60 VVAIGECGLDFDRLQFCP-----KDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIM 114
Query: 144 K-NYPKAF-GVLHCFN----ADGMLLELSDRFYYGIGGVSTFKNAKRLVEILPKIPKNRL 197
K N + GV+H F+ A L++L Y G G S A +E+L IP +L
Sbjct: 115 KRNRDRCVGGVVHSFDGTKEAAAALIDLD--LYIGFNGCSLKTEAN--LEVLKSIPSEKL 170
Query: 198 LLETDSPY 205
++ETD+P+
Sbjct: 171 MIETDAPW 178
>ref|NP_348025.1| (NC_003030) Predicted hydrolase of PHP superfamily [Clostridium
acetobutylicum]
gb|AAK79365.1|AE007651_8 (AE007651) Predicted hydrolase of PHP superfamily [Clostridium
acetobutylicum]
Length = 252
Score = 73.9 bits (180), Expect = 2e-12
Identities = 68/255 (26%), Positives = 120/255 (46%), Gaps = 16/255 (6%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAI 60
MFID H HLD + + L + L + ++ + D K ++ K + +
Sbjct: 1 MFIDAHNHLDFFEEQEKLNKAL-DIIKNDNIITLGCSMDTKSYKFTKSLALKNKNIIPCF 59
Query: 61 GAHPYDVESFDESL--FEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
G HP ++L F++++ K IGE GLDY + E+E Y K +FT +
Sbjct: 60 GIHPSRAHENFKNLECFDEYIRESKI--IGEIGLDYVWV---KEKEKYPH-MKRVFTYFL 113
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLE--LSDRFYYGIG-G 175
E + ++NK IH + A + N +K Y ++H ++ D L+ L Y+ I
Sbjct: 114 EEAKKYNKITNIHTKGAESEIYNYIKKYELKTPIIHWYSGDKDTLKKLLDYGCYFTISVD 173
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIE 235
+ K +K +V++L P +++L ETD P + G P I + ++I++I NI+
Sbjct: 174 IGYSKLSKEIVQLL---PIDKILTETDGP-TSLEWVNGDYGYPNVIKNVVKEISKIKNIQ 229
Query: 236 TEELASLSTHNAQML 250
EE+ + +N + L
Sbjct: 230 EEEVKGVIENNFKTL 244
>ref|XP_129661.1| (XM_129661) RIKEN cDNA 1500010M24 [Mus musculus]
Length = 189
Score = 73.6 bits (179), Expect = 2e-12
Identities = 44/156 (28%), Positives = 82/156 (52%), Gaps = 18/156 (11%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEG-VFFAIG 61
+D HCHL D++NDL++VL+++ + V V + R +++SE++ G V +G
Sbjct: 6 VDCHCHLSASDFDNDLDDVLEKARKANVMALVAVAEHAGEFERIMQLSERYNGFVLPCLG 65
Query: 62 AHPYD-----------VESFDESL--FEKFVGHQKCVAIGECGLDYYRLPELNERENYKS 108
HP ++ D +L EK+ + +AIGE GLD+ P + K
Sbjct: 66 VHPVQELSPEKPRSVTLKDLDVALPIIEKY--KDRLLAIGEVGLDF--TPRYAGTDEEKE 121
Query: 109 KQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLK 144
+Q+++ +Q++ + + N PL +H R A +++LL+
Sbjct: 122 EQRQVLIRQVQLAKRLNVPLNVHSRSAGRPTISLLR 157
>dbj|BAB23875.1| (AK005193) data source:SPTR, source key:P37545,
evidence:ISS~putative~related to HYPOTHETICAL 29.2 KDA
PROTEIN IN METS-KSGA INTERGENIC REGION [Mus musculus]
Length = 189
Score = 73.2 bits (178), Expect = 3e-12
Identities = 44/156 (28%), Positives = 81/156 (51%), Gaps = 18/156 (11%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEG-VFFAIG 61
+D HCHL D++NDL++VL+ + + V V + R +++SE++ G V +G
Sbjct: 6 VDCHCHLSASDFDNDLDDVLERARKANVMALVAVAEHAGEFERIMQLSERYNGFVLPCLG 65
Query: 62 AHPYD-----------VESFDESL--FEKFVGHQKCVAIGECGLDYYRLPELNERENYKS 108
HP ++ D +L EK+ + +AIGE GLD+ P + K
Sbjct: 66 VHPVQELSPEKPRSVTLKDLDVALPIIEKY--KDRLLAIGEVGLDF--TPRYAGTDEEKE 121
Query: 109 KQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLK 144
+Q+++ +Q++ + + N PL +H R A +++LL+
Sbjct: 122 EQRQVLIRQVQLAKRLNVPLNVHSRSAGRPTISLLR 157
>dbj|BAA21418.1| (AB004537) HYPOTHETICAL 47.4KD PROTEIN IN SHP1-SEC17 INTERGENIC
REGION [Schizosaccharomyces pombe]
Length = 258
Score = 72.8 bits (177), Expect = 3e-12
Identities = 70/265 (26%), Positives = 111/265 (41%), Gaps = 55/265 (20%)
Query: 34 VIPGADMKDLNRAIEISEKFEGVFFAIGAHPYDVESFD-------------ESLFEKFVG 80
+I G ++++ A+ ++ +E +G HP + F E+L K
Sbjct: 2 MITGDNVENSEEALNLATNYECFTSTVGVHPCQAQCFLRHSEGPEDYLVKLEALANKGKA 61
Query: 81 HQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSL 140
K VA GE GLDY RL QK F +Q++ +++ PL +H R A D
Sbjct: 62 SGKVVAFGEFGLDYDRLHYAPA-----DVQKMYFEEQLKVAVRVQLPLFLHSRNAENDFF 116
Query: 141 NLLKNY----PKAFGVLHCF--NADGMLLELSDRFYYGIGGVSTFKNAKRLVEILPKIPK 194
+L+ Y PK GV+H F + D M + Y G+ G S + +E++ IP
Sbjct: 117 AILEKYLPELPKK-GVVHSFTGSIDEMRRCIEHGLYVGVNGCSL--KTEENLEVVRAIPL 173
Query: 195 NRLLLETDSPYLTPHP---------------------------FRGTRNSPTYIPLIAQK 227
++LLETD+P+ P RG RN P ++A+
Sbjct: 174 EKMLLETDAPWCEVRPSHAGHQFLKTKLPFDSCKKERFKEGCMIRG-RNEPCNTYIVAEI 232
Query: 228 IAEIINIETEELASLSTHNAQMLFS 252
+A + +I EEL+ N+ L S
Sbjct: 233 VAALKDISLEELSEQIWENSINLLS 257
>ref|NP_313363.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
dbj|BAB38759.1| (AP002569) hypothetical protein [Escherichia coli O157:H7]
Length = 212
Score = 72.0 bits (175), Expect = 6e-12
Identities = 52/215 (24%), Positives = 105/215 (48%), Gaps = 20/215 (9%)
Query: 49 ISEKFEGVFFAIGAHPYDVESFDESLFEKFVGH-----QKCVAIGECGLDYYRLPELNER 103
++E ++ ++ A+G HP +E + ++ K VA+GE GLD + ER
Sbjct: 4 LAENYQPLYAALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGESGLDLFGDDPQFER 63
Query: 104 ENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFD-SLNLLKNYPKAFGVLHCFNADGML 162
+ + +Q++ + +++ P+I+H R +++L ++ GV+H F+
Sbjct: 64 QQW------FLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFSGS--- 114
Query: 163 LELSDRFYY-----GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNS 217
L+ ++RF G+GG T+ A + ++ K+P LLLETD+P + + F+G N
Sbjct: 115 LQQAERFVQLGYKIGVGGTITYPRASKTRVVIAKLPLASLLLETDAPDMPLNGFQGQPNR 174
Query: 218 PTYIPLIAQKIAEIINIETEELASLSTHNAQMLFS 252
P + + E+ +E+A + +N +F+
Sbjct: 175 PEQAARVFDVLCELRPEPEDEIAEVLLNNTYAVFN 209
>ref|NP_502188.1| (NM_069787) Y24F12A.1.p [Caenorhabditis elegans]
emb|CAB60325.2| (AL110480) contains similarity to Pfam domain: PF01026
(Metalloenzyme of unknown function), Score=111.1,
E-value=7e-30, N=1~cDNA EST EMBL:AU110529 comes from
this gene~cDNA EST EMBL:AU114454 comes from this gene
[Caenorhabditis elegans]
Length = 437
Score = 71.6 bits (174), Expect = 8e-12
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 83 KCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASF----- 137
K +A+GECG+D +R E+ QK++F K + + + PL+IH R S
Sbjct: 253 KVLAVGECGIDLHRC------ESELEVQKDVFEKHVALAFKFKLPLVIHCRNGSKGRAEE 306
Query: 138 DSLNLLK-----NYPKAFGVLHCFNADG----MLLELSDRFYYGIGGVSTFKNAKRLVEI 188
+ L +LK N+ HCF + M L+ ++G + F ++
Sbjct: 307 ECLQILKKKMDVNHKFLKIHRHCFTENWEVAQMWLKQCPDVHFGFTP-AVFTMGAPQIQA 365
Query: 189 LPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIP----LIAQKIAEIINIETEELASLST 244
+ IP +R+LLETD PY P + G +P A KIAEI N+ EE+ +
Sbjct: 366 IRNIPLDRILLETDGPYFKPKCYDGVAPPKVCLPGMAIATASKIAEIKNLPIEEVLRATF 425
Query: 245 HNAQMLFSFP 254
+N + ++ P
Sbjct: 426 NNTRRVYQLP 435
>pir||T26559 hypothetical protein Y24F12A.b - Caenorhabditis elegans
Length = 544
Score = 71.6 bits (174), Expect = 8e-12
Identities = 54/190 (28%), Positives = 87/190 (45%), Gaps = 25/190 (13%)
Query: 83 KCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASF----- 137
K +A+GECG+D +R E+ QK++F K + + + PL+IH R S
Sbjct: 251 KVLAVGECGIDLHRC------ESELEVQKDVFEKHVALAFKFKLPLVIHCRNGSKGRAEE 304
Query: 138 DSLNLLK-----NYPKAFGVLHCFNADG----MLLELSDRFYYGIGGVSTFKNAKRLVEI 188
+ L +LK N+ HCF + M L+ ++G + F ++
Sbjct: 305 ECLQILKKKMDVNHKFLKIHRHCFTENWEVAQMWLKQCPDVHFGFTP-AVFTMGAPQIQA 363
Query: 189 LPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIP----LIAQKIAEIINIETEELASLST 244
+ IP +R+LLETD PY P + G +P A KIAEI N+ EE+ +
Sbjct: 364 IRNIPLDRILLETDGPYFKPKCYDGVAPPKVCLPGMAIATASKIAEIKNLPIEEVLRATF 423
Query: 245 HNAQMLFSFP 254
+N + ++ P
Sbjct: 424 NNTRRVYQLP 433
>ref|NP_290992.1| (NC_002655) yjjV gene product [Escherichia coli O157:H7 EDL933]
gb|AAG59559.1|AE005669_3 (AE005669) yjjV gene product [Escherichia coli O157:H7 EDL933]
Length = 227
Score = 71.2 bits (173), Expect = 1e-11
Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 20/216 (9%)
Query: 49 ISEKFEGVFFAIGAHPYDVESFDESLFEKFVGH-----QKCVAIGECGLDYYRLPELNER 103
++E ++ ++ A+G HP +E + ++ K VA+GE GLD + ER
Sbjct: 4 LAENYQPLYAALGLHPGMLEKHSDVSLDQLQQALERRPAKVVAVGESGLDLFGDDPQFER 63
Query: 104 ENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFD-SLNLLKNYPKAFGVLHCFNADGML 162
+ + +Q++ + +++ P+I+H R +++L ++ GV+H F+
Sbjct: 64 QQW------FLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLSRTGVVHGFSGS--- 114
Query: 163 LELSDRFYY-----GIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNS 217
L+ ++RF G+GG T+ A + ++ K+P LLLETD+P + + F+G N
Sbjct: 115 LQQAERFVQLGYKIGVGGTITYPRASKTRVVIAKLPLASLLLETDAPDMPLNGFQGQPNR 174
Query: 218 PTYIPLIAQKIAEIINIETEELASLSTHNAQMLFSF 253
P + + E+ +E+A + +N +F
Sbjct: 175 PEQAARVFDVLCELRPEPEDEIAEVLLNNTYRCLTF 210
>gb|AAH07066.1|AAH07066 (BC007066) Unknown (protein for MGC:12519) [Homo sapiens]
Length = 207
Score = 69.3 bits (168), Expect = 4e-11
Identities = 53/178 (29%), Positives = 93/178 (51%), Gaps = 24/178 (13%)
Query: 14 YENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFA-IGAHPYDVESFDE 72
+++DL++V+ ++E GV + +I G +++D A+ +++ G+FF+ +G HP F++
Sbjct: 28 HQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQT-NGMFFSTVGCHPTRCGEFEK 86
Query: 73 SLFEKFV---------GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQ 123
+ + ++ K VAIGECGLD+ RL K Q + F KQ E S Q
Sbjct: 87 NNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCP-----KDTQLKYFEKQFELSEQ 141
Query: 124 HNKPLIIHIREASFDSLNLLK-NYPKAF-GVLHCFN----ADGMLLELSDRFYYGIGG 175
P+ +H R + + L+++K N + GV+H F+ A L++L Y G G
Sbjct: 142 TKLPMFLHCRNSHAEFLDIMKRNRDRCVGGVVHSFDGTKEAAAALIDLD--LYIGFNG 197
>pir||A65189 yigW protein - Escherichia coli (strain K-12)
gb|AAC76843.1| (AE000459) orf, hypothetical protein [Escherichia coli K12]
Length = 206
Score = 67.8 bits (164), Expect = 1e-10
Identities = 44/179 (24%), Positives = 83/179 (45%), Gaps = 13/179 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D +L + D ++V+ + + GV +I G ++++ +A +++ ++ + G H
Sbjct: 7 DIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVH 66
Query: 64 PYDVESFDESLFEKFV---GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+D + + E + + VAIGECGLD+ N + +Q+ F Q+
Sbjct: 67 PHDSSQWQAATEEAIIELAAQPEVVAIGECGLDF------NRNFSTPEEQERAFVAQLRI 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNA--DGMLLELSDRFYYGIGG 175
+ N P+ +H R+A + LL+ + VLHCF + M ++ Y GI G
Sbjct: 121 AADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITG 179
>ref|XP_059243.2| (XM_059243) similar to data source:SPTR, source key:P37545,
evidence:ISS~putative~related to HYPOTHETICAL 29.2 KDA
PROTEIN IN METS-KSGA INTERGENIC REGION [Homo sapiens]
Length = 191
Score = 67.8 bits (164), Expect = 1e-10
Identities = 42/156 (26%), Positives = 79/156 (49%), Gaps = 18/156 (11%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEG-VFFAIG 61
+D HCHL D++ DL++VL+++ + V V + + +++SE++ G V +G
Sbjct: 9 VDCHCHLSAPDFDRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLG 68
Query: 62 AHPYD-----------VESFDESL--FEKFVGHQKCVAIGECGLDYYRLPELNERENYKS 108
HP ++ D +L E + + +AIGE GLD+ P K
Sbjct: 69 VHPVQGLPPEDQRSVTLKDLDVALPIIENY--KDRLLAIGEVGLDF--SPRFAGTGEQKE 124
Query: 109 KQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLK 144
+Q+++ +QI+ + + N P+ +H R A ++NLL+
Sbjct: 125 EQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQ 160
>pir||S30730 hypothetical protein o206 - Escherichia coli
gb|AAA67636.1| (M87049) o206 [Escherichia coli]
Length = 206
Score = 67.4 bits (163), Expect = 1e-10
Identities = 44/179 (24%), Positives = 83/179 (45%), Gaps = 13/179 (7%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAH 63
D +L + D ++V+ + + GV +I G ++++ +A +++ ++ + G H
Sbjct: 7 DIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVH 66
Query: 64 PYDVESFDESLFEKFV---GHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEF 120
P+D + + E + + VAIGECGLD+ N + +Q+ F Q+
Sbjct: 67 PHDSSQWQAATEEAIIELAAXXEVVAIGECGLDF------NRNFSTPEEQERAFVAQLRI 120
Query: 121 SIQHNKPLIIHIREASFDSLNLLKNYPKAF--GVLHCFNA--DGMLLELSDRFYYGIGG 175
+ N P+ +H R+A + LL+ + VLHCF + M ++ Y GI G
Sbjct: 121 AADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITG 179
>ref|NP_597531.1| (NC_003230) similarity to putative DEOXYRIBONUCLEASE OF THE TATD
FAMILY [Encephalitozoon cuniculi]
emb|CAD26166.1| (AL590443) similarity to putative DEOXYRIBONUCLEASE OF THE TATD
FAMILY [Encephalitozoon cuniculi]
Length = 273
Score = 65.9 bits (159), Expect = 4e-10
Identities = 58/196 (29%), Positives = 88/196 (44%), Gaps = 20/196 (10%)
Query: 15 ENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAHPYDVESFDE-S 73
E+ +EEV++ + V + G D + I +++K++ V A G HP +
Sbjct: 18 ESSVEEVIRRCKDSKVLP-IFTGLDHQTSKICINLAKKYKTVSTA-GIHPTSSSRYSNID 75
Query: 74 LFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIR 133
V + VAIGECGLDY RL + K QK IF Q++ H R
Sbjct: 76 EIVPLVNDETVVAIGECGLDYDRLEFAD-----KVSQKRIFRSQLDLG---GSCYFFHSR 127
Query: 134 EASFDSLNLLKNYPKAFGVLHCFNADGMLLE----LSDRFYYGIGGVSTFKNAKRLVEIL 189
D + ++ +Y + GV+H F G + E + + GI G S +EI+
Sbjct: 128 SCHRDFMEIVSDY-RIRGVVHSFT--GSIEEARELIKKGLFIGINGCSV--KTLEGIEIV 182
Query: 190 PKIPKNRLLLETDSPY 205
+P LL+ETDSPY
Sbjct: 183 RSLPLESLLIETDSPY 198
>ref|NP_463843.1| (NC_003210) conserved hypothetical protein [Listeria monocytogenes
EGD-e]
emb|CAD00840.1| (AL591974) conserved hypothetical protein [Listeria monocytogenes]
Length = 248
Score = 60.1 bits (144), Expect = 2e-08
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 51 EKFEGVFFAIGAHPYDVES--FDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKS 108
+ ++ V +G HP V FD++ FE+ G Q IGE GLD+ + + +K
Sbjct: 51 DNYKYVRLGVGFHPDMVGEYDFDKNAFER--GLQYTRYIGEVGLDFSK-----SNQQFKE 103
Query: 109 KQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADG-MLLELSD 167
+Q EIF + IH R+A + L +LK+ + H + ML ++SD
Sbjct: 104 QQIEIFQQITSPKYNKGNVYSIHSRKAEVEVLQILKSNNVKSAIFHWYTGGKHMLKDISD 163
Query: 168 RFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPY 205
Y+ +K ++I+ IPK++LL ETD P+
Sbjct: 164 SGYF-FSVNHKMLTSKNGIDIIKSIPKSQLLFETDGPF 200
>ref|NP_009498.1| (NC_001134) Hypothetical ORF; Ybl055cp [Saccharomyces cerevisiae]
sp|P34220|YBF5_YEAST Putative deoxyribonuclease YBL055c
pir||S39833 hypothetical protein YBL055c - yeast (Saccharomyces cerevisiae)
emb|CAA80792.1| (Z23261) YBLO511 [Saccharomyces cerevisiae]
emb|CAA84875.1| (Z35816) ORF YBL055c [Saccharomyces cerevisiae]
Length = 418
Score = 57.0 bits (136), Expect = 2e-07
Identities = 62/277 (22%), Positives = 108/277 (38%), Gaps = 97/277 (35%)
Query: 17 DLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGV-----FFAIGAHPYDV---- 67
D ++L+ + ++ V ++ G+ + + AIE+ + + + IG HP V
Sbjct: 63 DYVKLLERAAQRHVKNALVTGSSIAESQSAIELVSSVKDLSPLKLYHTIGVHPCCVNEFA 122
Query: 68 ------------------ESFDESLFEKFVGHQKCV-----------------------A 86
E+++ESL+ K + + +
Sbjct: 123 DASQGDKASASIDNPSMDEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRS 182
Query: 87 IGECGLDYYRLPELNERENYKSK--QKEIFTKQIEFSIQHNK----PLIIHIREASFDSL 140
IGE GLDY +R +Y SK QK F +Q++ S ++K PL +H+R A D +
Sbjct: 183 IGEIGLDY-------DRFHYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSACDDFV 235
Query: 141 NLLKNYPKAFG----------------------------VLHCFNADGM----LLELSDR 168
+L+ + F V+H F + LL LS
Sbjct: 236 QILERFIAGFTDERDTFQLQKLGASSSSGFYKFHPDRKLVVHSFTGSAIDLQKLLNLSPN 295
Query: 169 FYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPY 205
+ G+ G S + + ++ +IP RLLLETD+P+
Sbjct: 296 IFIGVNGCSL--RTEENLAVVKQIPTERLLLETDAPW 330
>ref|NP_559693.1| (NC_003364) conserved hypothetical protein [Pyrobaculum aerophilum]
gb|AAL63875.1| (AE009851) conserved hypothetical protein [Pyrobaculum aerophilum]
Length = 234
Score = 57.0 bits (136), Expect = 2e-07
Identities = 50/216 (23%), Positives = 95/216 (43%), Gaps = 17/216 (7%)
Query: 39 DMKDLNRAIEISEKFEGVFFAIGAHPYDVESF---DESLFEKFVGHQKCVAIGECGLDYY 95
D++ + +E+ +GV IG HP+ VE D + + + + +GE GLD
Sbjct: 31 DLESSKKTVEL----QGVVKCIGIHPWQVERAEPGDLNTTLRLIEKWEVPCVGEVGLDKK 86
Query: 96 RLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHC 155
+P + KQ E F ++ + + + + +H +A D+L +L+ ++H
Sbjct: 87 FVPHSYD------KQVEYFRAFLKLARELDLVVNVHAPDAWQDALEMLRRADVDRAIIHW 140
Query: 156 FNADGMLLELSDRFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTR 215
F LLE + Y I ++ E+ + +LLE+D PY +RG R
Sbjct: 141 FTGPLQLLETIKDYGYYITINPAVAIQRKHQEVAKTADRRIVLLESDGPY----EYRGMR 196
Query: 216 NSPTYIPLIAQKIAEIINIETEELASLSTHNAQMLF 251
+P I +K++E+ + + + NA+ L+
Sbjct: 197 LAPPVIKNTVEKLSELWEAPKDYVVEVVETNAKRLW 232
>ref|XP_128306.1| (XM_128306) similar to CDA11 protein [Mus musculus]
Length = 135
Score = 55.8 bits (133), Expect = 4e-07
Identities = 29/108 (26%), Positives = 62/108 (56%), Gaps = 12/108 (11%)
Query: 14 YENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGAHPYDVESFDES 73
+++DL++V++ +++ GV + +I G ++D A+++++ + F +G HP + F++
Sbjct: 28 HQDDLQDVIERAIQIGVKKFMITGGSLQDSKDALQLAQTNDMFFSTVGCHPTRCDEFEKG 87
Query: 74 LFEKFVG---------HQKCVAIGECGLDYYRL---PELNERENYKSK 109
++++ K VAIGECGLD+ RL P+ + + Y+ K
Sbjct: 88 SPDQYLAGLLSLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYYEKK 135
>ref|NP_376839.1| (NC_003106) 239aa long conserved hypothetical protein [Sulfolobus
tokodaii]
dbj|BAB65948.1| (AP000984) 239aa long conserved hypothetical protein [Sulfolobus
tokodaii]
Length = 239
Score = 55.8 bits (133), Expect = 4e-07
Identities = 62/253 (24%), Positives = 104/253 (40%), Gaps = 32/253 (12%)
Query: 2 FIDTHCHLDH--KDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIE-ISEKFEGVFF 58
+ D HCH + K YEN I A D + +IE +S K +
Sbjct: 15 YYDAHCHYSYLKKKYEN-----------------FIIAAVSMDYSTSIETLSLKSPDILA 57
Query: 59 AIGAHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQI 118
IG HP+ V +E+L + +K IGE GLDY + KS Q + F
Sbjct: 58 GIGIHPWKVH--EENLNKVLELVRKADFIGEVGLDY------RYAKADKSIQLKYFEAFA 109
Query: 119 EFSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIGGVST 178
E + K + +H +A D+ N+L+ + + H + LL+ + Y I +
Sbjct: 110 EEASNQKKLINVHALDAWEDAFNILQKHNVKRAIFHWYTGPENLLKEIEGAGYFITVNPS 169
Query: 179 FKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEE 238
K+ I+ K P + +L E+D Y ++G P +I ++I+++ EE
Sbjct: 170 VTFQKKHQNIVIKSPLDIILTESDGGY----EYKGRLLEPVHIVEAIKEISKLKGTSEEE 225
Query: 239 LASLSTHNAQMLF 251
+ + N + F
Sbjct: 226 VNKIVERNFKKAF 238
>emb|CAB63556.1| (AL031746) conserved hypothetical protein, UPF0006 family
[Plasmodium falciparum 3D7]
Length = 412
Score = 54.7 bits (130), Expect = 1e-06
Identities = 60/225 (26%), Positives = 97/225 (42%), Gaps = 33/225 (14%)
Query: 2 FIDTHCH-----LDHKDYENDL-----EEVLKESLEKGVTQCVIPGADMKDLNRAIEISE 51
FID + H + K+YE + E+V +E G + DM +LN +
Sbjct: 150 FIDKNKHEEKEIIAKKEYEEFIKYFKNEQVENSKMENGNKKICDGEKDMNNLNEIL---- 205
Query: 52 KFEGVFFAIGAHPYDVESFD--ESLFEKFVGH-QKCVAIGECGLDYYRLPELNERENYKS 108
E I Y+ + + E+L K + + + V IGE GLD+ RL + K
Sbjct: 206 -LEKNLDTIPGFKYNEKDKEYLENLKNKIIKYPNRIVCIGEIGLDFDRLYFCS-----KY 259
Query: 109 KQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKNYPKAF----GVLHCFNADG---- 160
Q + F Q++ N P+ +H+R S ++ Y F GV+H F
Sbjct: 260 IQIKYFIFQLKLVQMFNLPMFLHMRNCSETFFKIVDIYKFLFEKNGGVIHSFTDKEDIVH 319
Query: 161 MLLELSDRFYYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPY 205
++++ Y G+ G S + + + KIP N LLLETD+P+
Sbjct: 320 IIVQNYKNLYIGVNGCSL--KSLENINAVKKIPLNLLLLETDAPW 362
>ref|NP_654152.1| (NC_003995) TatD_DNase, TatD related DNase [Bacillus anthracis
A2012] [Bacillus anthracis str. A2012]
Length = 254
Score = 53.5 bits (127), Expect = 2e-06
Identities = 51/251 (20%), Positives = 113/251 (44%), Gaps = 13/251 (5%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLE--KGVTQCVIPGADMKDLNRAIEISEKFEGVFFA 59
+ID+H H+D Y+++ + L + +E K + + + + + +++++ V A
Sbjct: 3 WIDSHIHVD--QYKDEEKSRLLKDVENSKEIQGLIAVSMNYQSSKEILSLAKRYSFVHPA 60
Query: 60 IGAHPYDV--ESFDESLFEKFVGH-QKCVAIGECGLDYYRLPELNERENYKSKQKEIFTK 116
+G HP + E +++ H + VAIGE GL YY E + + + +
Sbjct: 61 VGFHPEQPIHKEECEKIYKLIEDHVEDIVAIGEVGLPYYLRKE--DEHIAINSYISVLQR 118
Query: 117 QIEFSIQHNKPLIIH-IREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIGG 175
+E + +++ P+++H + E + +LL+ + + H F + R Y I
Sbjct: 119 FVELASKYDLPIVLHAVYEDADVVCDLLEKHKVSRAHFHWFKGSETTMXRMMRNGYYISI 178
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIE 235
+ +++ +I+ P +++ETD P+ G P I + ++I+ I N+
Sbjct: 179 TPDVLHKEKIRKIVSYYPLEYMMVETDGPWGFQ---EGVMTHPGMIREVLKEISVIKNVA 235
Query: 236 TEELASLSTHN 246
+++A N
Sbjct: 236 VDKVAETIYEN 246
>ref|NP_342501.1| (NC_002754) Conserved hypothetical protein [Sulfolobus
solfataricus]
gb|AAK41291.1| (AE006722) Conserved hypothetical protein [Sulfolobus solfataricus]
Length = 232
Score = 52.4 bits (124), Expect = 5e-06
Identities = 55/247 (22%), Positives = 93/247 (37%), Gaps = 32/247 (12%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIG 61
+ D HCH + L+K +I M + S K + V +G
Sbjct: 4 YFDAHCHYSY--------------LKKKYEGYLIAAVSMDYQSAMDTFSLKSDNVLVGVG 49
Query: 62 AHPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFS 121
HP+ V D + + K +GE GLDY + KE+ K E
Sbjct: 50 IHPWRVHEEDLTRILSLI--IKADFVGEVGLDY----------RFAKAPKELQIKYFEEQ 97
Query: 122 IQ--HNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIGGVSTF 179
I+ K + +H +A D+ N+L + H + LL+ + Y I +
Sbjct: 98 IKAGEGKLINVHALDAWKDAFNILVKNDVKSAIFHWYTGPINLLKDIESAGYFISINPSV 157
Query: 180 KNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETEEL 239
K+ E+L + +L E+D Y +RG P+ IP ++ + IE +L
Sbjct: 158 SFQKKHQEVLKNVDLKNVLTESDGGY----EYRGKLLEPSDIPNAISFMSNFLGIEEYKL 213
Query: 240 ASLSTHN 246
+ ++N
Sbjct: 214 VRIISNN 220
>ref|NP_641803.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM36339.1| (AE011779) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 79
Score = 50.8 bits (120), Expect = 1e-05
Identities = 26/77 (33%), Positives = 42/77 (53%)
Query: 178 TFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETE 237
T+ A RL ++ ++P LLLETD+P RG RN P Y+ + IA++ +
Sbjct: 2 TYPRANRLRGLVARMPLQHLLLETDAPDQPDAGIRGQRNEPAYLRTVLDCIAQLRGQDPA 61
Query: 238 ELASLSTHNAQMLFSFP 254
+A+ ++ NA+ LF P
Sbjct: 62 HIAAQTSANARNLFGLP 78
>pir||B65189 yigW protein - Escherichia coli (strain K-12)
gb|AAA67637.1| (M87049) o113 [Escherichia coli]
gb|AAC76844.1| (AE000459) orf, hypothetical protein [Escherichia coli K12]
Length = 113
Score = 50.4 bits (119), Expect = 2e-05
Identities = 31/82 (37%), Positives = 44/82 (52%), Gaps = 6/82 (7%)
Query: 175 GVSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIA 229
G + + L E+LP IP +LL+ETD+PY LTP P RN P ++P I Q+IA
Sbjct: 29 GFAMNRRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKP-SSRRNEPAHLPHILQRIA 87
Query: 230 EIINIETEELASLSTHNAQMLF 251
+ LA+ + N + LF
Sbjct: 88 HWRGEDAAWLAATTDANVKTLF 109
>pir||S30731 hypothetical protein o113 - Escherichia coli
Length = 113
Score = 50.4 bits (119), Expect = 2e-05
Identities = 31/82 (37%), Positives = 44/82 (52%), Gaps = 6/82 (7%)
Query: 175 GVSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIA 229
G + + L E+LP IP +LL+ETD+PY LTP P RN P ++P I Q+IA
Sbjct: 29 GFAMNRRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKP-SSRRNEPAHLPHILQRIA 87
Query: 230 EIINIETEELASLSTHNAQMLF 251
+ LA+ + N + LF
Sbjct: 88 HWRGEDAAWLAATTDANVKTLF 109
>ref|NP_613818.1| (NC_003551) Predicted metal-dependent hydrolase of the TIM-barrel
fold [Methanopyrus kandleri AV19]
gb|AAM01748.1| (AE010347) Predicted metal-dependent hydrolase of the TIM-barrel
fold [Methanopyrus kandleri AV19]
Length = 256
Score = 50.4 bits (119), Expect = 2e-05
Identities = 42/144 (29%), Positives = 67/144 (46%), Gaps = 25/144 (17%)
Query: 2 FIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADM-----KDLNRAIEISEKFEG- 55
++D H HLD + YE DLE + + VT P DM L R + E + G
Sbjct: 3 YVDAHVHLDVRSYE-DLERMALSGVRTVVTCAHDPYPDMTAEVYSALFRRLLGVETWRGE 61
Query: 56 -----VFFAIGAHPYDV-ESFDESL--FEKFVGHQKCVAIGECGLDYYRLPELNERENYK 107
V A+G HP V ++ + L E+ + H+ VAIGE GL+ EN
Sbjct: 62 KAGLTVKVAVGVHPGGVPDNMSDVLREVEELLSHEDVVAIGETGLN----------ENPD 111
Query: 108 SKQKEIFTKQIEFSIQHNKPLIIH 131
++ ++ Q++ + +H P+I+H
Sbjct: 112 DREIQVLEAQLKLAREHEVPIIVH 135
>ref|NP_247746.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58171|Y761_METJA Hypothetical protein MJ0761
pir||A64395 hypothetical protein MJ0761 - Methanococcus jannaschii
gb|AAB98752.1| (U67521) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 251
Score = 48.1 bits (113), Expect = 9e-05
Identities = 60/222 (27%), Positives = 97/222 (43%), Gaps = 36/222 (16%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVT------QCVIPGADMKDLNRAIEISEK---F 53
ID H HLD + +E DLE++ +E +T + P + +R I + K
Sbjct: 2 IDAHTHLDVRSFE-DLEKMALSGIETIITCAHDPYKMSTPEVYLDHWDRLINLEVKRGEM 60
Query: 54 EGVFF--AIGAHPYDVESFDESLFEK---FVGHQKCVAIGECGLDYYRLPELNERENYKS 108
GV A+G HP E L +K F+ ++ VAIGE GL Y L E E
Sbjct: 61 AGVEVKVAVGVHPMGYPKNWEVLIKKLPEFLDNENVVAIGETGLHY-----LTEDE---- 111
Query: 109 KQKEIFTKQIEFSIQHNKPLIIHI-----REASFDSLNLLKNYPKAFGVLHCFNADGMLL 163
K + +Q+ + +N P+IIH +EA + L +L ++ + + +
Sbjct: 112 --KNLLREQLYLAKDYNMPIIIHTPEKNKKEALIEILKILDEVKIKDSLVMIDHINKETV 169
Query: 164 ELSDRFYYGIGGVSTFKNAKRLVEILPKIPKN---RLLLETD 202
+L DR Y G++ + K E +I KN + +L +D
Sbjct: 170 DLIDRDVY--VGLTVQPSMKLTHEEAAEIIKNYNKKFILSSD 209
>sp|P23918|YMES_BACST Putative deoxyribonuclease in metS 3'region
pir||S16683 hypothetical protein - Bacillus stearothermophilus (fragment)
emb|CAA41000.1| (X57925) ORF [Geobacillus stearothermophilus]
Length = 49
Score = 48.1 bits (113), Expect = 9e-05
Identities = 21/49 (42%), Positives = 32/49 (64%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEI 49
M DTH HL+ YE DLE+V++ + +GV+ V+ G D ++RAIE+
Sbjct: 1 MLFDTHAHLNAVQYEEDLEQVIERARAEGVSHIVVVGFDRPTIDRAIEL 49
>ref|NP_395956.1| (NC_003064) AGR_pAT_25p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_535396.1| (NC_003306) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (Dupont)] [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAK90397.1| (AE007874) AGR_pAT_25p [Agrobacterium tumefaciens str. C58
(Cereon)]
gb|AAL45712.1| (AE008927) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 256
Score = 46.6 bits (109), Expect = 3e-04
Identities = 54/212 (25%), Positives = 92/212 (42%), Gaps = 21/212 (9%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEGVFFAIGA 62
IDTHCHLD V+ E+ ++G+ + L I ++E + + A+G
Sbjct: 2 IDTHCHLDLYPKPGT---VIAEADKRGMFVIAVTTTPKAFLGN-IRMTEGKKRIRVAVGL 57
Query: 63 HPYDVESFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSK---QKEIFTKQIE 119
HP V + + K +GE G+D +KS Q E+F + +
Sbjct: 58 HPELVAERHREVEDVCKLMAKTKYVGEIGID--------GSPPHKSSIKLQTEVFARFLT 109
Query: 120 FSIQ-HNKPLIIHIREASFDSLNLL-KNYPKAFGVLHCFNADGMLLELSDRF--YYGIGG 175
+ + K L IH R A+ L+ + +N +LH F+ +E + + ++ +G
Sbjct: 110 RASELGGKVLSIHSRGAAALVLDEIERNGHGTLPILHWFSGSKQQVERAAKLGCWFSVGP 169
Query: 176 VSTFKNAKRLVEILPKIPKNRLLLETDSPYLT 207
R E+L +P++RLL ETD P+ T
Sbjct: 170 AMLRSRKGR--ELLASMPRHRLLTETDGPFAT 199
>sp|P45305|YG64_HAEIN Putative deoxyribonuclease HI1664
Length = 251
Score = 45.1 bits (105), Expect = 8e-04
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 14/257 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKF-EGVFFA 59
M D+H HLD EN +++ L S G+ + ++ + + + + + + ++ A
Sbjct: 1 MLFDSHLHLDQLSDEN-IQQTLAHSKIIGM---LAVSTNLNSAKKLLNLKQTYPKKLYIA 56
Query: 60 IGAHP-YDVESFDES--LFEKFVGHQKCV-AIGECGLDYYRLPELNERENYKSKQKEIFT 115
G HP + S +E LF+ H + AIGE GL +Y E N +Y E+
Sbjct: 57 AGFHPEQQLPSLEEQKKLFQWIDEHHSSISAIGEVGLPHYSKRE-NPNLDYVP-YIELLE 114
Query: 116 KQIEFSIQHNKPLIIHIREASFD-SLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIG 174
+ I + + + PL +HI + +L LL+ + H F D + Y
Sbjct: 115 RFILIAKKWDLPLNLHIVHNDVEIALELLQKHNIQRAHFHWFKTDEKSFQKFFSTPYFAS 174
Query: 175 GVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINI 234
+ + + NRL++ETDSP+ H + + QK+AE+ ++
Sbjct: 175 LTPDILWNSKTQYVAQHLSLNRLMIETDSPW--QHEGFERAGISEQLLAVLQKLAELKSL 232
Query: 235 ETEELASLSTHNAQMLF 251
+ N Q +
Sbjct: 233 PLHSVQKQILLNTQQFY 249
>ref|NP_439806.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
pir||E64174 hypothetical protein HI1664 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC23310.1| (U32839) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 259
Score = 45.1 bits (105), Expect = 8e-04
Identities = 58/257 (22%), Positives = 105/257 (40%), Gaps = 14/257 (5%)
Query: 1 MFIDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKF-EGVFFA 59
M D+H HLD EN +++ L S G+ + ++ + + + + + + ++ A
Sbjct: 9 MLFDSHLHLDQLSDEN-IQQTLAHSKIIGM---LAVSTNLNSAKKLLNLKQTYPKKLYIA 64
Query: 60 IGAHP-YDVESFDES--LFEKFVGHQKCV-AIGECGLDYYRLPELNERENYKSKQKEIFT 115
G HP + S +E LF+ H + AIGE GL +Y E N +Y E+
Sbjct: 65 AGFHPEQQLPSLEEQKKLFQWIDEHHSSISAIGEVGLPHYSKRE-NPNLDYVP-YIELLE 122
Query: 116 KQIEFSIQHNKPLIIHIREASFD-SLNLLKNYPKAFGVLHCFNADGMLLELSDRFYYGIG 174
+ I + + + PL +HI + +L LL+ + H F D + Y
Sbjct: 123 RFILIAKKWDLPLNLHIVHNDVEIALELLQKHNIQRAHFHWFKTDEKSFQKFFSTPYFAS 182
Query: 175 GVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINI 234
+ + + NRL++ETDSP+ H + + QK+AE+ ++
Sbjct: 183 LTPDILWNSKTQYVAQHLSLNRLMIETDSPW--QHEGFERAGISEQLLAVLQKLAELKSL 240
Query: 235 ETEELASLSTHNAQMLF 251
+ N Q +
Sbjct: 241 PLHSVQKQILLNTQQFY 257
>ref|NP_147217.1| (NC_000854) hypothetical protein [Aeropyrum pernix]
pir||A72736 hypothetical protein APE0423 - Aeropyrum pernix (strain K1)
dbj|BAA79381.1| (AP000059) 252aa long hypothetical protein [Aeropyrum pernix]
Length = 252
Score = 43.5 bits (101), Expect = 0.002
Identities = 57/253 (22%), Positives = 103/253 (40%), Gaps = 21/253 (8%)
Query: 4 DTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLNRAIEISEKFEG-VFFAIGA 62
D H HL H+ + ++EE+L V V D++ R +++ F G V +G
Sbjct: 11 DMHVHL-HEYSDREVEEILDADKSLVV---VAVSDDLESAWRTLDLWHTFGGRVVPCLGF 66
Query: 63 HPYDVES---FDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEIFTKQIE 119
HP++V ++ + +GE GLD + E R Q E+F ++
Sbjct: 67 HPWNVREGRVWEAWEVLRLAYRYGVPCLGEVGLDRRFVDEYTWRV-----QNEVFDAFVQ 121
Query: 120 FSIQHNKPLIIHIREASFDSLNLLKNYPKAFGVLHCFNADGMLLEL--SDRFYYGIGGVS 177
+ L IH +A + + +A + H + L R ++ I S
Sbjct: 122 LAEDMGVMLNIHAPDAWKHVAHRIGWTSRARFMYHWYTGPATLPRALPEGRVWFSIN--S 179
Query: 178 TFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIAEIINIETE 237
+ ++ V + +IP L++E+D PY +RG R SP + + +AE +
Sbjct: 180 AIRVQEKSVRVAREIPLRSLVVESDGPY----NYRGLRLSPLMVRETVKLVAEARGEDPG 235
Query: 238 ELASLSTHNAQML 250
L + N++ L
Sbjct: 236 RLMEAISLNSERL 248
>ref|NP_248386.1| (NC_000909) conserved hypothetical protein [Methanococcus
jannaschii] [Methanocaldococcus jannaschii]
sp|Q58778|YD83_METJA Hypothetical protein MJ1383 precursor
pir||F64472 hypothetical protein MJ1383 - Methanococcus jannaschii
gb|AAB99393.1| (U67578) conserved hypothetical protein [Methanococcus jannaschii]
[Methanocaldococcus jannaschii]
Length = 256
Score = 42.7 bits (99), Expect = 0.004
Identities = 48/195 (24%), Positives = 81/195 (40%), Gaps = 39/195 (20%)
Query: 3 IDTHCHLDHKDYENDLEEVLKESLEKGVTQCVIPGADMKDLN-----------RAIEISE 51
IDTH H D + E DLE L GV +MK++ +E ++
Sbjct: 2 IDTHIHSDTRGLE-DLE--LMAMCLDGVITLAHDPFEMKNIKVWEAHVEKLLINELERAK 58
Query: 52 KFE-GVFFAIGAHPYDVE-SFDESL--FEKFVGHQ-KCVAIGECGLDYYRLPELNERENY 106
K +F +G HP + DE+L + ++ + + V IGE GL E
Sbjct: 59 KVGLNLFICVGMHPRAIPPEIDEALDKIKSYINYNSRVVGIGEIGL-----------EKA 107
Query: 107 KSKQKEIFTKQIEFSIQHNKPLIIH--------IREASFDSLNLLKNYPKAFGVLHCFNA 158
++KE+F KQ+ + + N P ++H + + D ++ L + + HC N
Sbjct: 108 TKEEKEVFIKQLLLAEELNMPAVVHTPRRNKEEVTKIILDEISTLNLKNRDIVIEHC-NK 166
Query: 159 DGMLLELSDRFYYGI 173
+ L + FY G+
Sbjct: 167 ETTKWVLDEEFYVGL 181
>pir||T51070 hypothetical protein B2A19.40 [imported] - Neurospora crassa
Length = 484
Score = 41.6 bits (96), Expect = 0.008
Identities = 40/135 (29%), Positives = 64/135 (46%), Gaps = 24/135 (17%)
Query: 85 VAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLK 144
+A GE GLDY RL + S + ++ + S+ PL +H R A D ++ LK
Sbjct: 186 IAFGEFGLDYDRLHYCSRTIQLHSFRAQL---SLAASLTPQLPLFLHSRAAHRDFVDCLK 242
Query: 145 NYPKAF----------GVLHCFNADGMLLELSD----RFYYGIGGVSTFKNAKRLVEILP 190
+AF GV+H F G L E+ + + G+ G S FK + ++
Sbjct: 243 ---EAFGPNLERLEKGGVVHSFT--GTLEEMQELMDLGLFIGVNGCS-FKTDENCA-VVK 295
Query: 191 KIPKNRLLLETDSPY 205
+I +R++LETD P+
Sbjct: 296 QIRLDRIMLETDGPW 310
>ref|NP_051679.1| (NC_000959) conserved hypothetical protein [Deinococcus
radiodurans]
pir||E75635 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF12677.1|AE001827_15 (AE001827) conserved hypothetical protein [Deinococcus radiodurans]
Length = 244
Score = 41.6 bits (96), Expect = 0.008
Identities = 49/201 (24%), Positives = 90/201 (44%), Gaps = 18/201 (8%)
Query: 56 VFFAIGAHPYDVE--SFDESLFEKFVGHQKCVAIGECGLDYYRLPELNERENYKSKQKEI 113
V+ A+G HP V + D F++++ + V GE GLD P L ++Q +
Sbjct: 51 VWTALGFHPEVVSERAADLPWFDRYLPETRFV--GEVGLD--GSPSLR---GTWTQQFAV 103
Query: 114 FTKQIEFSIQHN-KPLIIHIREASFDSLNLLKNYPKA-FGVLHCFNADGMLLE--LSDRF 169
F + H + L IH R A + LN L+ P++ +LH ++ L +S
Sbjct: 104 FQHILRRCEDHGGRILSIHSRRAESEVLNCLEANPRSGTPILHWYSGSVTELRRAISLGC 163
Query: 170 YYGIGGVSTFKNAKRLVEILPKIPKNRLLLETDSPYLTPHPFRGTRNSPTYIPLIAQKIA 229
++ +G T ++ ++ +P++R+L ETD P+L G P + + + ++
Sbjct: 164 WFSVG--PTMVRTQKGAALIRSMPRDRVLTETDGPFL---ELDGQAALPWDVKSVVEGLS 218
Query: 230 EIINIETEELASLSTHNAQML 250
+I I E+ + N L
Sbjct: 219 KIWQIPASEVERIVKENVSRL 239
>emb|CAD11331.1| (AL390092) conserved hypothetical protein [Neurospora crassa]
Length = 474
Score = 41.6 bits (96), Expect = 0.008
Identities = 40/135 (29%), Positives = 64/135 (46%), Gaps = 24/135 (17%)
Query: 85 VAIGECGLDYYRLPELNERENYKSKQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLK 144
+A GE GLDY RL + S + ++ + S+ PL +H R A D ++ LK
Sbjct: 176 IAFGEFGLDYDRLHYCSRTIQLHSFRAQL---SLAASLTPQLPLFLHSRAAHRDFVDCLK 232
Query: 145 NYPKAF----------GVLHCFNADGMLLELSD----RFYYGIGGVSTFKNAKRLVEILP 190
+AF GV+H F G L E+ + + G+ G S FK + ++
Sbjct: 233 ---EAFGPNLERLEKGGVVHSFT--GTLEEMQELMDLGLFIGVNGCS-FKTDENCA-VVK 285
Query: 191 KIPKNRLLLETDSPY 205
+I +R++LETD P+
Sbjct: 286 QIRLDRIMLETDGPW 300
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.320 0.140 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,691,245
Number of Sequences: 1026957
Number of extensions: 6687695
Number of successful extensions: 20385
Number of sequences better than 1.0e-02: 150
Number of HSP's better than 0.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 66
Number of HSP's that attempted gapping in prelim test: 19911
Number of HSP's gapped (non-prelim): 162
length of query: 254
length of database: 324,149,939
effective HSP length: 118
effective length of query: 136
effective length of database: 202,969,013
effective search space: 27603785768
effective search space used: 27603785768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 96 (41.6 bits)