BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644791|ref|NP_206961.1| conserved hypothetical
protein [Helicobacter pylori 26695]
(240 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_206961.1| (NC_000915) conserved hypothetical protein... 469 e-131
ref|NP_222870.1| (NC_000921) putative [Helicobacter pylori ... 459 e-129
ref|NP_282319.1| (NC_002163) hypothetical protein Cj1172c [... 271 4e-72
gb|AAF60954.1|AF104936_2 (AF104936) unknown [Riemerella ana... 168 4e-41
ref|NP_390660.1| (NC_000964) similar to spore coat protein ... 144 8e-34
ref|NP_622766.1| (NC_003869) conserved hypothetical protein... 143 2e-33
ref|NP_562870.1| (NC_003366) conserved hypothetical protein... 139 3e-32
ref|NP_356893.1| (NC_003063) AGR_L_2215p [Agrobacterium tum... 139 3e-32
sp|Q9ZNK0|YEBC_CLOHI HYPOTHETICAL 27.2 KDA PROTEIN ORF2U >g... 137 1e-31
ref|NP_539238.1| (NC_003317) GLUCOSE-1-PHOSPHATE ADENYLYLTR... 137 1e-31
ref|NP_662548.1| (NC_002932) conserved hypothetical protein... 136 2e-31
ref|NP_218915.1| (NC_000919) conserved hypothetical protein... 134 8e-31
ref|NP_228276.1| (NC_000853) conserved hypothetical protein... 134 8e-31
ref|NP_465060.1| (NC_003210) similar to unknown proteins [L... 133 1e-30
ref|NP_348911.1| (NC_003030) Uncharacterized conserved prot... 132 3e-30
ref|NP_386859.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN... 128 5e-29
ref|NP_470906.1| (NC_003212) similar to unknown proteins [L... 128 6e-29
ref|NP_212159.1| (NC_001318) conserved hypothetical protein... 122 4e-27
ref|NP_422037.1| (NC_002696) conserved hypothetical protein... 121 7e-27
ref|NP_326455.1| (NC_002771) conserved hypothetical protein... 120 2e-26
ref|NP_104937.1| (NC_002678) hypothetical protein [Mesorhiz... 119 2e-26
ref|NP_602477.1| (NC_003454) Hypothetical cytosolic protein... 118 5e-26
ref|NP_249655.1| (NC_002516) conserved hypothetical protein... 114 1e-24
ref|NP_625800.1| (NC_003888) conserved hypothetical protein... 113 2e-24
ref|NP_214082.1| (NC_000918) hypothetical protein [Aquifex ... 113 2e-24
ref|NP_078129.1| (NC_002162) conserved hypothetical [Ureapl... 113 2e-24
pir||JC5479 hypothetical protein, 26K - Pseudomonas aerugin... 113 2e-24
ref|NP_360318.1| (NC_003103) unknown [Rickettsia conorii] >... 112 3e-24
ref|NP_456466.1| (NC_003198) conserved hypothetical protein... 112 3e-24
ref|NP_299192.1| (NC_002488) conserved hypothetical protein... 112 5e-24
ref|NP_469733.1| (NC_003212) conserved hypothetical protein... 111 8e-24
ref|NP_288301.1| (NC_002655) orf, hypothetical protein [Esc... 110 1e-23
ref|NP_416378.1| (NC_000913) orf, hypothetical protein [Esc... 110 1e-23
gb|AAD51398.1|AF117715_7 (AF117715) YebC [Legionella pneumo... 110 1e-23
ref|NP_520311.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 110 2e-23
ref|NP_463899.1| (NC_003210) conserved hypothetical protein... 110 2e-23
ref|NP_232407.1| (NC_002506) conserved hypothetical protein... 109 3e-23
ref|NP_488316.1| (NC_003272) hypothetical protein [Nostoc s... 109 3e-23
dbj|BAA09118.1| (D50551) hypothetical protein YrbC [Bacillu... 109 3e-23
gb|AAF22218.1|AF140575_3 (AF140575) unknown [Mycoplasma hyo... 108 4e-23
ref|NP_600875.1| (NC_003450) COG0217:Uncharacterized ACR [C... 108 5e-23
ref|NP_288492.1| (NC_002655) orf, hypothetical protein [Esc... 108 5e-23
ref|NP_463358.1| (NC_003197) putative cytoplasmic protein [... 108 7e-23
ref|NP_416490.1| (NC_000913) orf, hypothetical protein [Esc... 107 9e-23
ref|NP_405607.1| (NC_003143) conserved hypothetical protein... 107 9e-23
ref|NP_458924.1| (NC_003198) conserved hypothetical protein... 107 9e-23
gb|AAK19837.1|AF331924_2 (AF038651) hypothetical structural... 107 1e-22
ref|NP_643459.1| (NC_003919) conserved hypothetical protein... 107 1e-22
ref|NP_245917.1| (NC_002663) unknown [Pasteurella multocida... 107 1e-22
ref|NP_654473.1| (NC_003995) DUF28, Domain of unknown funct... 106 2e-22
ref|NP_301420.1| (NC_002677) conserved hypothetical protein... 106 2e-22
ref|NP_244125.1| (NC_002570) BH3259~unknown conserved prote... 105 3e-22
ref|NP_638374.1| (NC_003902) conserved hypothetical protein... 105 6e-22
ref|NP_217119.1| (NC_000962) hypothetical protein Rv2603c [... 104 7e-22
ref|NP_266388.1| (NC_002662) conserved hypothetical protein... 103 2e-21
ref|NP_388566.1| (NC_000964) similar to hypothetical protei... 103 2e-21
ref|NP_224769.1| (NC_000922) YebC family hypothetical prote... 103 2e-21
ref|NP_297116.1| (NC_002620) conserved hypothetical protein... 102 4e-21
ref|NP_219970.1| (NC_000117) YebC family [Chlamydia trachom... 102 5e-21
ref|NP_274653.1| (NC_003112) conserved hypothetical protein... 101 6e-21
ref|NP_284609.1| (NC_003116) conserved hypothetical protein... 101 8e-21
ref|NP_438481.1| (NC_000907) conserved hypothetical protein... 100 1e-20
ref|NP_220835.1| (NC_000963) unknown [Rickettsia prowazekii... 100 1e-20
ref|NP_441940.1| (NC_000911) hypothetical protein [Synechoc... 100 1e-20
ref|NP_346350.1| (NC_003028) conserved hypothetical protein... 99 3e-20
ref|NP_268655.1| (NC_002737) conserved hypothetical protein... 99 5e-20
ref|NP_296268.1| (NC_001263) conserved hypothetical protein... 98 9e-20
ref|NP_645448.1| (NC_003923) conserved hypothetical protein... 96 4e-19
gb|AAH05049.1|AAH05049 (BC005049) Similar to RIKEN cDNA 231... 92 6e-18
ref|NP_565610.1| (NM_128143) expressed protein [Arabidopsis... 87 1e-16
sp|O82314|YB30_ARATH Hypothetical protein At2g25830 87 2e-16
ref|NP_110166.1| (NC_000912) similar to spore coat protein ... 87 2e-16
gb|AAL07079.1| (AY056230) unknown protein [Arabidopsis thal... 86 3e-16
ref|NP_011535.1| (NC_001139) Hypothetical ORF; Ygr021wp [Sa... 81 9e-15
ref|NP_595550.1| (NC_003423) HYPOTHETICAL 31.7 KD PROTEIN I... 79 4e-14
pir||T40757 conserved hypothetical protein SPBC8D2.12c - fi... 79 4e-14
ref|NP_073001.1| (NC_000908) conserved hypothetical protein... 79 4e-14
ref|NP_595574.1| (NC_003423) conserved protein; possibly mi... 79 4e-14
dbj|BAA15803.1| (D90837) ORF_ID:o347#4~similar to [SwissPro... 77 2e-13
dbj|BAB26682.1| (AK010072) data source:SPTR, source key:Q9W... 70 2e-11
ref|XP_044376.2| (XM_044376) clone HQ0477 PRO0477p [Homo sa... 66 4e-10
ref|NP_497183.1| (NM_064782) Y50D7A.9.p [Caenorhabditis ele... 62 5e-09
gb|EAA00925.1| (AAAB01008987) ebiP8570 [Anopheles gambiae s... 60 2e-08
ref|NP_371193.1| (NC_002758) conserved hypothetical protein... 52 4e-06
ref|NP_609366.1| (NM_135522) CG4957 gene product [Drosophil... 44 0.002
gb|AAF52894.1| (AE003628) CG4957 gene product [Drosophila m... 44 0.002
ref|NP_057444.1| (NM_016360) clone HQ0477 PRO0477p [Homo sa... 42 0.007
>ref|NP_206961.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
sp|O24970|Y162_HELPY Hypothetical protein HP0162
pir||B64540 conserved hypothetical protein HP0162 - Helicobacter pylori
(strain 26695)
gb|AAD07231.1| (AE000537) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 240
Score = 469 bits (1207), Expect = e-131
Identities = 240/240 (100%), Positives = 240/240 (100%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP
Sbjct: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
Query: 61 KDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGAS 120
KDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGAS
Sbjct: 61 KDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGAS 120
Query: 121 IVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYN 180
IVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYN
Sbjct: 121 IVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYN 180
Query: 181 SFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
SFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE
Sbjct: 181 SFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
>ref|NP_222870.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZMR9|Y162_HELPJ Hypothetical protein JHP0149
pir||G71968 hypothetical protein jhp0149 - Helicobacter pylori (strain J99)
gb|AAD05730.1| (AE001453) putative [Helicobacter pylori J99]
Length = 240
Score = 459 bits (1182), Expect = e-129
Identities = 234/240 (97%), Positives = 238/240 (98%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAK+GGSEPDTNAKLRTAILNAKAQNMP
Sbjct: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKEGGSEPDTNAKLRTAILNAKAQNMP 60
Query: 61 KDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGAS 120
KDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGAS
Sbjct: 61 KDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGAS 120
Query: 121 IVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYN 180
IVPNGSLEFMFNRKSVFECLK+EVENLKLSLEDLEFALIDYGLEELEEV DKIIIRGDYN
Sbjct: 121 IVPNGSLEFMFNRKSVFECLKSEVENLKLSLEDLEFALIDYGLEELEEVGDKIIIRGDYN 180
Query: 181 SFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
SFKLLNEGFESL+LPI+KA LQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE
Sbjct: 181 SFKLLNEGFESLRLPIIKAGLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
>ref|NP_282319.1| (NC_002163) hypothetical protein Cj1172c [Campylobacter jejuni]
pir||F81322 hypothetical protein Cj1172c [imported] - Campylobacter jejuni
(strain NCTC 11168)
emb|CAB73426.1| (AL139077) hypothetical protein Cj1172c [Campylobacter jejuni]
Length = 235
Score = 271 bits (693), Expect = 4e-72
Identities = 140/241 (58%), Positives = 180/241 (74%), Gaps = 7/241 (2%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGRAFEYRRA+KE RWDKMSK+FPKLAKAI +AAK+GG++PD N KLR+AI AKA NMP
Sbjct: 1 MGRAFEYRRASKEARWDKMSKLFPKLAKAIQVAAKEGGTDPDMNPKLRSAIATAKANNMP 60
Query: 61 KDNIDAAIKRASSKE-GNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
KDNIDAAIKRAS K+ ++ I YEGKA G L+I+ECM+DNPTRT+AN+K+ F+K G
Sbjct: 61 KDNIDAAIKRASGKDSADIKNIHYEGKAAHGALVIVECMSDNPTRTVANVKAIFSK-NGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
++ NGSL FMF RK+VF +E LE+LE LID GLEELE+ E++++I GDY
Sbjct: 120 EVLQNGSLGFMFTRKAVF-----HLEKFAGDLEELELDLIDAGLEELEQNEEELVISGDY 174
Query: 180 NSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNI 239
+F L+ E+ L + KA L+ I P+ ++EQ+ EKLLD++EDDDDV A+YTNI
Sbjct: 175 TAFGELSSAIEAKGLVLKKAGLEYIPNNPVSFSEEQLSDIEKLLDKLEDDDDVQAVYTNI 234
Query: 240 E 240
+
Sbjct: 235 D 235
>gb|AAF60954.1|AF104936_2 (AF104936) unknown [Riemerella anatipestifer]
Length = 228
Score = 168 bits (426), Expect = 4e-41
Identities = 90/223 (40%), Positives = 133/223 (59%), Gaps = 5/223 (2%)
Query: 19 MSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEG-N 77
M+K F K+ K I LA K GG +PD+N LR I NAK NMPKDN++ AIK+AS + N
Sbjct: 1 MAKTFSKIGKDIALAVKAGGPDPDSNPALRRCIQNAKGANMPKDNVERAIKKASGADAEN 60
Query: 78 LSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVF 137
EITYEG GV +EC T+N TRT+AN+++ FNK G ++ NG L F+F+RK +F
Sbjct: 61 YEEITYEGYGQGGVAFFVECTTNNSTRTVANVRAIFNKFDG-NLGKNGELSFLFDRKGIF 119
Query: 138 ECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPIL 197
K+ + + E+ E +ID G E+++ E ++++ + F L+ + L + +
Sbjct: 120 TLEKSLI---NMDWEEFEMEMIDGGAEDIDSDETEVMVTTAFEDFGSLSHKLDELGIEVK 176
Query: 198 KASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
A LQRI +++EQ K+L R E+DDDV +Y N+E
Sbjct: 177 NAELQRIPNISKSVSEEQFIANMKMLQRFEEDDDVQNVYHNME 219
>ref|NP_390660.1| (NC_000964) similar to spore coat protein [Bacillus subtilis]
sp|P94447|YRBC_BACSU Hypothetical protein yrbC
pir||B69972 yrbC protein - Bacillus subtilis
emb|CAB14742.1| (Z99118) similar to spore coat protein [Bacillus subtilis]
emb|CAB75324.1| (Y15896) hypothetical protein [Bacillus subtilis]
Length = 240
Score = 144 bits (363), Expect = 8e-34
Identities = 86/223 (38%), Positives = 130/223 (57%), Gaps = 7/223 (3%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGN 77
K K+F KLAK I +AAK+GG++P+ N+ LR I AK NMP +NID AIK+A+ +
Sbjct: 20 KRGKIFMKLAKEIYVAAKEGGADPEANSALRLVIEKAKGANMPNENIDRAIKKAAGGQDG 79
Query: 78 LS--EITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKS 135
S EITYEG G+ +++EC+TDN RT +N+++ FNK G S+ +G + F+F RK
Sbjct: 80 SSYEEITYEGYGPSGIAVMVECVTDNKNRTASNVRTAFNK-NGGSLGESGCVAFLFERKG 138
Query: 136 VFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLP 195
+ E ++ ++L +++ G EEL ED + + F+ + ES K
Sbjct: 139 FITIDRTE---RQIEEDELMLDVLEAGGEELRIEEDLYEVFTEPEHFEEVKTALES-KYL 194
Query: 196 ILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTN 238
I A + + T E +D+ +E E L+D +EDDDDV +YTN
Sbjct: 195 ISSAEVTMLPNTYAEADDQAVEKLETLIDVLEDDDDVQEVYTN 237
>ref|NP_622766.1| (NC_003869) conserved hypothetical protein [Thermoanaerobacter
tengcongensis]
gb|AAM24370.1| (AE013076) conserved hypothetical protein [Thermoanaerobacter
tengcongensis]
Length = 245
Score = 143 bits (360), Expect = 2e-33
Identities = 85/231 (36%), Positives = 130/231 (55%), Gaps = 7/231 (3%)
Query: 12 KEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRA 71
KEK K ++F KL K I AAK+GG +P+TN+KL+ AI AKA N+P +NI AIKR
Sbjct: 16 KEKMDAKKGRIFTKLTKDIIKAAKEGGGDPETNSKLKLAIERAKAFNLPSENIQRAIKRG 75
Query: 72 SSKEG--NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEF 129
+ + G L E+ YEG G II+E +TDN RT ++ F++ G ++ GS+ +
Sbjct: 76 TGELGGAKLEEVIYEGYGPAGTAIIVEALTDNKNRTAGEIRHIFDR-NGGTLGAAGSVTW 134
Query: 130 MFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGF 189
MF++ V K + ++ EDL I+ G E+ E + I D ++F+ + E
Sbjct: 135 MFDKVGVIVVEKTD----SINEEDLMMVAIEAGAEDFSADEGEFEIITDPSNFQEVREAI 190
Query: 190 ESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
E I +A + + I+L+ E E EKL+D++ED+DDV +Y N+E
Sbjct: 191 EKAGYKISEAEITMLPKNTIKLSPEDYEKFEKLIDKLEDNDDVQNVYHNVE 241
>ref|NP_562870.1| (NC_003366) conserved hypothetical protein [Clostridium
perfringens]
dbj|BAA81643.1| (AB028630) hypothetical protein [Clostridium perfringens]
dbj|BAB81660.1| (AP003192) conserved hypothetical protein [Clostridium perfringens]
Length = 245
Score = 139 bits (349), Expect = 3e-32
Identities = 80/234 (34%), Positives = 129/234 (54%), Gaps = 8/234 (3%)
Query: 9 RAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAI 68
+A K K K K+F K+ K I +A K+GG+ D N++L+ A+ AKA NMP DNI AI
Sbjct: 11 QAKKGKMDAKRGKIFTKIGKEIAVAVKEGGANLDGNSRLKDAVAKAKAANMPNDNIQRAI 70
Query: 69 KRASSK--EGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGS 126
K+A+ + N I YEG GV +++E +TDN R+ N++S F K G ++ +G
Sbjct: 71 KKAAGEGDSVNYESIVYEGYGPSGVAVMVEVLTDNKNRSAGNVRSAFTK-GGGNMGTSGC 129
Query: 127 LEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLN 186
+ FMF +K + +E +L +++ +D G E+ E+ I+ F +
Sbjct: 130 VGFMFQKKG-----EIVIEKAELDEDEIMMMALDAGAEDFASEEEVFIVTTSPEDFGTVR 184
Query: 187 EGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
E E+ L L+A+++ I T +N++ + +K+LD +EDDDDV +Y N E
Sbjct: 185 EALEAEGLEFLEAAVKMIPDTETAINEDDAKKFQKMLDLLEDDDDVQEVYHNAE 238
>ref|NP_356893.1| (NC_003063) AGR_L_2215p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
ref|NP_534221.1| (NC_003305) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
gb|AAK89678.1| (AE008310) AGR_L_2215p [Agrobacterium tumefaciens str. C58
(Cereon)]
gb|AAL44537.1| (AE009303) conserved hypothetical protein [Agrobacterium
tumefaciens str. C58 (U. Washington)]
Length = 248
Score = 139 bits (349), Expect = 3e-32
Identities = 93/234 (39%), Positives = 139/234 (58%), Gaps = 15/234 (6%)
Query: 12 KEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRA 71
K K+ SK+F KLA+ IT+AAK G +P+ NA+LR AI NAKAQ+MPKDNI+ AIK+A
Sbjct: 14 KGKQDSVRSKMFSKLAREITVAAKTGMPDPNMNARLRLAIQNAKAQSMPKDNIERAIKKA 73
Query: 72 SSKEG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFM 130
S + N E+ YEG GV +++E +TDN RT +N++S F K GA + GS+ F
Sbjct: 74 SGADSENYDEVRYEGYGPGGVAVVVEALTDNRNRTASNVRSIFTKAGGA-LGETGSVSFS 132
Query: 131 FNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED-KIIIRGDYNSFKLLNEGF 189
F+R K EV + +E A I+ G +++E ED II G F+ +NE
Sbjct: 133 FDRVGEI-TYKAEVGDADKVME----AAIEAGADDVESSEDGHTIICG----FEAMNEVS 183
Query: 190 ESLKLPILKASLQRIATTP---IELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
++L+ + +A + P + +++E+ + KL+D +EDDDDV +Y+N E
Sbjct: 184 KALEGVLGEAESVKAIWKPQNTVPVDEEKAQSLMKLIDNLEDDDDVQNVYSNFE 237
>sp|Q9ZNK0|YEBC_CLOHI HYPOTHETICAL 27.2 KDA PROTEIN ORF2U
pir||T44353 hypothetical protein [imported] - Clostridium histolyticum
dbj|BAA34259.1| (AB014075) Orf2u [Clostridium histolyticum]
Length = 246
Score = 137 bits (345), Expect = 1e-31
Identities = 82/234 (35%), Positives = 126/234 (53%), Gaps = 7/234 (2%)
Query: 9 RAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAI 68
+A K K K K+F K+ K I +AAK+GG PD N KLR I AKA NMPKD+I+ AI
Sbjct: 11 QAKKSKVDAKRGKIFTKIGKEIAIAAKNGGPNPDANPKLRDVIAKAKANNMPKDSIERAI 70
Query: 69 KRASSKEG--NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGS 126
K+A+ + N EI YEG G+ ++++ +TDN R+ N++ F+K G ++ G
Sbjct: 71 KKAAGELAGVNYEEILYEGYGPDGIAVLVQALTDNKNRSAGNVRHAFSK-HGGNLGSTGC 129
Query: 127 LEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLN 186
+ FMF K KN+ +L E+L ++ G E+ + ++ II F +
Sbjct: 130 VSFMFQTKGQIVIEKND----ELDEEELMMMALECGAEDFQSEDEVYIITTSPEDFGSVR 185
Query: 187 EGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
E E L L+A ++ I T +++ +K+LD +EDD+DV +Y N E
Sbjct: 186 ETLEEKGLEFLEAEVKSIPDTYTVIDENTAGKFQKMLDVLEDDEDVQDVYHNAE 239
>ref|NP_539238.1| (NC_003317) GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE [Brucella
melitensis]
gb|AAL51502.1| (AE009474) hypothetical cytosolic protein [Brucella melitensis]
Length = 255
Score = 137 bits (345), Expect = 1e-31
Identities = 92/225 (40%), Positives = 137/225 (60%), Gaps = 13/225 (5%)
Query: 20 SKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEG-NL 78
SK+F KLA+ IT+AAK G +P N +LR AI NAKAQ+MPKDNI+ AIK+A+ +G N
Sbjct: 29 SKMFSKLAREITVAAKQGLPDPAMNPRLRLAIQNAKAQSMPKDNIERAIKKAAGNDGENY 88
Query: 79 SEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFE 138
E+ YEG+ GV +I+E +TDN RT +N+++ F K+ G S+ GS+ FMF+R
Sbjct: 89 DEVRYEGRGPGGVSVIVEALTDNRNRTASNVRAAFTKS-GGSLGETGSVSFMFDRVGEI- 146
Query: 139 CLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILK 198
K E + +E A I+ G E+++ ED +I +F+ + E ++L+ + +
Sbjct: 147 VYKPEAGDADKVME----AAIEAGAEDVQSGEDGHVI---LCAFEDIGEVSKALEAALGE 199
Query: 199 A-SLQRI--ATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
A S++ I T EL++E+ KLL +EDDDDV +YTN E
Sbjct: 200 AESIKTIWKPQTNTELDEEKARSVLKLLSVLEDDDDVQNVYTNFE 244
>ref|NP_662548.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM72890.1| (AE012921) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 251
Score = 136 bits (342), Expect = 2e-31
Identities = 87/226 (38%), Positives = 126/226 (55%), Gaps = 9/226 (3%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSK-EG 76
K +F KL K IT+AAK GG +P N +LR AI A+A +MP DNI AIKR + + EG
Sbjct: 20 KRGSLFTKLVKEITIAAKMGGGDPTGNPRLRLAIDTARANSMPMDNIQRAIKRGTGELEG 79
Query: 77 -NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKS 135
EITYEG G+ II+E TDN RT+A+++ ++ G S+ +GS+ +MF RK
Sbjct: 80 ATYEEITYEGYGPGGIAIIIETATDNRNRTVADIRHLMSR-GGGSLGESGSVGWMFKRKG 138
Query: 136 VFECLKNEVENLKLSLEDLEFALIDYGLEELE-EVEDKIIIRGDYNSFKLLNEGFESLKL 194
EV +S +DL L+D GLEELE + E + D + + + E +
Sbjct: 139 SI-----EVPRSAISEDDLMELLLDAGLEELESDDEQYFTVLTDVKDLEPVKKALEEAGI 193
Query: 195 PILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
P A + I +EL+ E KL+D +E+ DDV A+Y+N++
Sbjct: 194 PFENAKIDMIPDNYVELDVENARKALKLIDALENSDDVQAVYSNMD 239
>ref|NP_218915.1| (NC_000919) conserved hypothetical protein [Treponema pallidum]
sp|O83487|Y474_TREPA Hypothetical protein TP0474
pir||H71318 conserved hypothetical protein TP0474 - syphilis spirochete
gb|AAC65461.1| (AE001224) conserved hypothetical protein [Treponema pallidum]
Length = 245
Score = 134 bits (337), Expect = 8e-31
Identities = 77/225 (34%), Positives = 131/225 (58%), Gaps = 8/225 (3%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGN 77
K ++F K K I++AA+ G +P N +LRTAIL A+A NMPKDNI+ AIK+ + +
Sbjct: 20 KRGQLFTKFIKEISVAARMAGGDPQANPRLRTAILKARAANMPKDNIERAIKKGTGELSG 79
Query: 78 LS--EITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKS 135
S E+ YEG A GV +++E +TDN R AN+++ F++ G ++ GS+ +MFNRK
Sbjct: 80 SSYEELVYEGYAPGGVAVLVEVLTDNKNRAAANVRNLFSR-NGGNLGSAGSVSYMFNRKG 138
Query: 136 VFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLP 195
V E +V+ L +E AL + G E+++ + + +F+ + E ++
Sbjct: 139 VIEYDSEQVDEEAL----MELAL-EAGAEDIQNAGGVLTVTTVPGTFETVLESLQAKGWE 193
Query: 196 ILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
L A + + T + L++E K++DR+E+++DV A+Y+N +
Sbjct: 194 SLSAGISMVPDTYLALDEETARKVLKMIDRLEEEEDVQAVYSNAD 238
>ref|NP_228276.1| (NC_000853) conserved hypothetical protein [Thermotoga maritima]
pir||B72374 conserved hypothetical protein - Thermotoga maritima (strain MSB8)
gb|AAD35550.1|AE001724_8 (AE001724) conserved hypothetical protein [Thermotoga maritima]
Length = 254
Score = 134 bits (337), Expect = 8e-31
Identities = 87/242 (35%), Positives = 140/242 (56%), Gaps = 21/242 (8%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNID 65
++R+ A++ K SK+F KL + I +AA++GG +TN +LR A+ A+A+NMPK+NI+
Sbjct: 12 KHRKMAQDA---KKSKIFTKLIREIIVAAREGGGNIETNPRLRAAVERARAENMPKENIE 68
Query: 66 AAIKRASSK-EG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
AIKR + + EG + E+ YEG A GV + + +TDN RT L+ FNK G S+
Sbjct: 69 RAIKRGTGELEGVDYQEVIYEGYAPGGVAVYIRALTDNKNRTAQELRHLFNK-YGGSLAE 127
Query: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKI-IIRGDYN-- 180
+GS+ ++F RK V E +++V++ LE+L ID G E++++ ED I II N
Sbjct: 128 SGSVSWIFERKGVIEISRDKVKD----LEELMMIAIDAGAEDIKDAEDPIQIITAPENLS 183
Query: 181 --SFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTN 238
KL G+E ++A + I +++ + E + L+ +ED DDV +Y+N
Sbjct: 184 EVKSKLEEAGYE------VEAKVTFIPKNTVKVTGKDAEKVLEFLNALEDMDDVQEVYSN 237
Query: 239 IE 240
E
Sbjct: 238 FE 239
>ref|NP_465060.1| (NC_003210) similar to unknown proteins [Listeria monocytogenes
EGD-e]
emb|CAC99613.1| (AL591979) similar to unknown proteins [Listeria monocytogenes]
Length = 241
Score = 133 bits (335), Expect = 1e-30
Identities = 85/231 (36%), Positives = 120/231 (51%), Gaps = 7/231 (3%)
Query: 12 KEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRA 71
K + K SKVF KLA+ I +AAK G +P N LR + AKA NMP DNI AI +A
Sbjct: 14 KNAQDSKRSKVFQKLAREIFVAAKKG-PDPSLNPSLRLVMDKAKAVNMPNDNIKRAIDKA 72
Query: 72 SSKEG--NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEF 129
S N E+TYEG A G+ +++ +TDN RT N++ FNK G S+ GS+ +
Sbjct: 73 SGNTSGENYDEVTYEGYAPGGIAVLVHALTDNKNRTSTNVRVAFNKN-GGSLGETGSVSY 131
Query: 130 MFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGF 189
MF+RK L+ E L + E+ I+ G +++E ED I D +F + E
Sbjct: 132 MFDRKGYLVILR---EGLTVDEEEFMLEAIEAGADDVEVSEDVFEIFTDPATFSEVKEAL 188
Query: 190 ESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ A L T E+ + +K+L+ +EDDDDV +YTN E
Sbjct: 189 QEAGYTFATAELSMFPTVYNEIAENNQTQFDKMLEALEDDDDVQEVYTNAE 239
>ref|NP_348911.1| (NC_003030) Uncharacterized conserved protein, YebC family
[Clostridium acetobutylicum]
gb|AAK80251.1|AE007730_6 (AE007730) Uncharacterized conserved protein, YebC family
[Clostridium acetobutylicum]
Length = 246
Score = 132 bits (332), Expect = 3e-30
Identities = 80/234 (34%), Positives = 124/234 (52%), Gaps = 7/234 (2%)
Query: 9 RAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAI 68
+A K K K KVF K+ K I +A K GG+ D N+KLR + AKA NMP D I+ AI
Sbjct: 11 QAKKGKADAKRGKVFTKIGKEIAVAVKTGGANLDANSKLRDCVAKAKAANMPMDTINRAI 70
Query: 69 KR-ASSKEG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGS 126
K+ A EG N EI YEG GV +++ +TDN R+ ++++ F++ G ++ +G
Sbjct: 71 KKGAGELEGVNYEEIIYEGYGPAGVAMLVNVLTDNKNRSASDVRYCFDR-NGGNLGASGC 129
Query: 127 LEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLN 186
+ +MF RK KN+ + ++L ++D+G E+ E+ II F +
Sbjct: 130 VAWMFQRKGQIVIEKND----SIDEDELMMKVLDFGAEDFASEEEVFIITTAQEEFSNVR 185
Query: 187 EGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
E E + A L + ++L+ E E +KL+D++ED DDV +Y N E
Sbjct: 186 EALEKENFEFVSAELTMVPDNTVKLSLEDSERVQKLIDKLEDSDDVQDVYHNAE 239
>ref|NP_386859.1| (NC_003047) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC47332.1| (AL591791) CONSERVED HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 248
Score = 128 bits (322), Expect = 5e-29
Identities = 85/227 (37%), Positives = 128/227 (55%), Gaps = 17/227 (7%)
Query: 20 SKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEG-NL 78
SK+F KLA+ IT+AAK G +P N +LR AI NAKAQ+MPKDNI+ A+K+A+ + N
Sbjct: 22 SKMFSKLAREITVAAKTGLPDPTMNPRLRLAIQNAKAQSMPKDNIERAVKKAAGGDAENY 81
Query: 79 SEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFE 138
E+ YEG GV +I+E +TDN RT +N++S F K GA + GS+ F F+R
Sbjct: 82 EEVRYEGYGPGGVAVIVEALTDNRNRTASNVRSTFTKAGGA-LGETGSVSFSFDRVGEI- 139
Query: 139 CLKNEVENLKLSLEDLE---FALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESL--K 193
KLS D + A I+ G +++E E+ I + +++ E +
Sbjct: 140 -------TYKLSAGDADKVMEAAIEAGADDVETDEEGHTITCGFEDIGEVSKALEGALGE 192
Query: 194 LPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+KA + T P++ +E+ + KL+D +EDDDDV +Y+N E
Sbjct: 193 AETVKAVWKPQNTVPVD--EEKAQSLMKLIDNLEDDDDVQNVYSNFE 237
>ref|NP_470906.1| (NC_003212) similar to unknown proteins [Listeria innocua]
emb|CAC96801.1| (AL596169) similar to unknown proteins [Listeria innocua]
Length = 241
Score = 128 bits (321), Expect = 6e-29
Identities = 79/231 (34%), Positives = 121/231 (52%), Gaps = 7/231 (3%)
Query: 12 KEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRA 71
K + K SKVF KLA+ I +AAK G +P+ N LR + AKA NMP DNI AI +A
Sbjct: 14 KNAQDSKRSKVFQKLAREIFVAAKKG-PDPNLNPSLRLVMDKAKAVNMPNDNIKRAIDKA 72
Query: 72 SSKEG--NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEF 129
+ N E+TYEG A G+ +++ +TDN RT N++ FNK G S+ GS+ +
Sbjct: 73 AGNTSGENYDEVTYEGYAPGGIAVLVHALTDNKNRTSTNVRVAFNK-NGGSLGETGSVSY 131
Query: 130 MFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGF 189
MF+RK L+ E L + E+ I+ G +++E +D + + +F + +
Sbjct: 132 MFDRKGYLVILR---EGLTVDEEEFMLEAIEAGADDVEVSDDVFEVFTEPGAFSDVKDAL 188
Query: 190 ESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ A L T E+ + +K+++ +EDDDDV +YTN E
Sbjct: 189 QQAGYTFATAELSMFPTVYNEIAENNQTQFDKMMEALEDDDDVQEVYTNAE 239
>ref|NP_212159.1| (NC_001318) conserved hypothetical protein [Borrelia burgdorferi]
sp|O51056|Y025_BORBU Hypothetical protein BB0025
pir||A70103 conserved hypothetical protein BB0025 - Lyme disease spirochete
gb|AAC66408.1| (AE001116) conserved hypothetical protein [Borrelia burgdorferi]
Length = 243
Score = 122 bits (305), Expect = 4e-27
Identities = 88/228 (38%), Positives = 129/228 (55%), Gaps = 15/228 (6%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRA-SSKEG 76
K +K+F KL + IT+AAK GG + ++N +LR A+ AK NMPKDNI+ AIK+ EG
Sbjct: 20 KRNKIFTKLIREITIAAKIGGGDIESNPRLRVAVNKAKVANMPKDNIEKAIKKGIGGNEG 79
Query: 77 -NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKS 135
EITYE A +GV ++++C+TDN RT +++KS K G S+ GS+ +MF RK
Sbjct: 80 VEYFEITYEAYAPYGVALMIKCLTDNKNRTSSDVKSVLAK-GGGSLGTPGSVSYMFYRKG 138
Query: 136 VFECLKNEVENLKLSLED--LEFALIDYGLEE-LEEVEDKIIIRGDYNSFKLLNEGFESL 192
+ V NL+ LED +EFAL + G E+ L + +I + K+L+ F
Sbjct: 139 LI------VYNLEKYLEDEIMEFAL-EVGAEDILVSNNEAEVITSPDDFDKVLS--FLKT 189
Query: 193 KLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
K A + I I LN +Q E L++++ED DDV + N+E
Sbjct: 190 KFKEEVAEIALIPENKISLNKDQAEKIILLVEKLEDFDDVQEVIHNLE 237
>ref|NP_422037.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK25205.1| (AE005988) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 251
Score = 121 bits (303), Expect = 7e-27
Identities = 84/228 (36%), Positives = 129/228 (55%), Gaps = 19/228 (8%)
Query: 20 SKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKE-GNL 78
SK+F KL++ IT+AAK G +P N +LR A+ NAKA+++PKD I+ AIK++ + +
Sbjct: 22 SKLFSKLSREITVAAKTGLPDPAMNPRLRLAVNNAKAESLPKDVIERAIKKSQMGDAADY 81
Query: 79 SEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFE 138
SEI YEG A GV II+E +TDN R AN++SYF K G ++ GS+ F F+R
Sbjct: 82 SEIRYEGVAAGGVGIIVEVLTDNKNRAAANVRSYFTK-MGGNMGATGSVTFNFDRVGQIS 140
Query: 139 CLKNEVENLKLSLEDLEFALIDYGLEEL-----EEVEDKIIIRGDYNSFKLLNEGFESLK 193
S +D+ A I+ G +++ EE E + Y +F+ LN+ +L+
Sbjct: 141 YPAKAA-----SEDDMMEAAIEAGADDVTSDMDEEGEGHTV----YTAFESLNDVAAALE 191
Query: 194 LPILKASLQRIATTP---IELNDEQMELTEKLLDRIEDDDDVVALYTN 238
AS +IA P + + + + KLLD +++DDDV A+Y+N
Sbjct: 192 AKFGAASNTKIAWRPKMQVPVTGDAVATLMKLLDMLDEDDDVQAVYSN 239
>ref|NP_326455.1| (NC_002771) conserved hypothetical protein [Mycoplasma pulmonis]
emb|CAC13797.1| (AL445565) conserved hypothetical protein [Mycoplasma pulmonis]
Length = 241
Score = 120 bits (300), Expect = 2e-26
Identities = 76/225 (33%), Positives = 126/225 (55%), Gaps = 11/225 (4%)
Query: 20 SKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRA---SSKEG 76
+K+F K AK I +AA GG + D+N LR A+ AK+++MPK NI+ AI +A S
Sbjct: 22 AKIFQKFAKEIYVAAVAGGPDVDSNPALRLAVNKAKSKSMPKVNIEKAIAKASGNSKSSS 81
Query: 77 NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSV 136
SE Y G + GV I++ C++DN R +N+KSYFNK G + GS+ +++ +K +
Sbjct: 82 TYSEYIYSGTVSKGVQILVICLSDNFNRLSSNIKSYFNKA-GGQLSKQGSIPYVYQQKGL 140
Query: 137 FECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLK--L 194
E K + K++ E AL + G E+++ ++ I + +SF ++E E
Sbjct: 141 IEIDKKLISEDKIT----EIAL-EAGAEDIQAEDNYYSITCEPSSFNQVSEFIEKATGFS 195
Query: 195 PILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNI 239
L + IA+ +EL+DE E ++++E+D+DV A+Y N+
Sbjct: 196 EFLTREVSYIASDYVELDDESSEKVMAFIEKLENDEDVQAVYHNL 240
>ref|NP_104937.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB50723.1| (AP003003) hypothetical protein [Mesorhizobium loti]
Length = 249
Score = 119 bits (299), Expect = 2e-26
Identities = 80/225 (35%), Positives = 128/225 (56%), Gaps = 13/225 (5%)
Query: 20 SKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEG-NL 78
SK+F KLA+ IT+AAK G +P N +LR AI NAKA +MPKDNI AI +AS + N
Sbjct: 22 SKMFSKLAREITVAAKSGTPDPSMNPRLRLAIQNAKAVSMPKDNIQRAINKASMGDAENY 81
Query: 79 SEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFE 138
+ YEG GV +I+E +TDN R+ +N+++ F K GA + GS+ FM++R
Sbjct: 82 EAVRYEGYGPGGVAVIVEALTDNRNRSASNVRAAFTKAGGA-MGETGSVSFMWDRVGEIY 140
Query: 139 CLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILK 198
+ S + + A I+ G +++E E+ I Y +F+ L E ++L+ + +
Sbjct: 141 YPASAG-----SADKVMEAAIEAGADDVESDEEGHTI---YCAFENLGEVSKALEAALGE 192
Query: 199 ASLQRIATTP---IELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
A ++ P + +++E+ + KL+ +EDDDDV ++Y N E
Sbjct: 193 AESVKLIWRPQNNVPVDEERAQSLMKLVATLEDDDDVQSVYANFE 237
>ref|NP_602477.1| (NC_003454) Hypothetical cytosolic protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
gb|AAL93776.1| (AE010472) Hypothetical cytosolic protein [Fusobacterium nucleatum
subsp. nucleatum ATCC 25586]
Length = 249
Score = 118 bits (296), Expect = 5e-26
Identities = 73/238 (30%), Positives = 131/238 (54%), Gaps = 12/238 (5%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNID 65
++R+ A++K K +K+F K + +T+AAK+GG +P+ N +LR AI AKA NMPKD ++
Sbjct: 11 QHRKGAQDK---KRAKLFTKFGRELTIAAKEGGGDPNFNPRLRLAIEKAKAGNMPKDILE 67
Query: 66 AAIKRASSK-EG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
AIK+ S + EG + +E+ YEG G I+E +TDN RT + ++ F + G ++
Sbjct: 68 RAIKKGSGELEGVDFTEMRYEGYGPAGTAFIVEAVTDNKNRTASEMRMTFTRKDG-NLGA 126
Query: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFK 183
+G++ +MF +K V V+ + ++ A ++ G E++ E + + +Y F+
Sbjct: 127 DGAVSWMFKKKGVI-----TVKAEGIDADEFMMAALEAGAEDVTEDDGYFEVTTEYTEFQ 181
Query: 184 LLNEGFESLKLPILKASLQRIATTPIELND-EQMELTEKLLDRIEDDDDVVALYTNIE 240
+ E ++ +A + I +E+ D E + L D +ED DD +Y+N +
Sbjct: 182 TVLENLKNAGYQYEEAEISMIPENTVEITDLETAKKVMALYDALEDLDDSQNVYSNFD 239
>ref|NP_249655.1| (NC_002516) conserved hypothetical protein [Pseudomonas aeruginosa]
sp|Q51423|Y964_PSEAE Hypothetical protein PA0964
pir||F83524 conserved hypothetical protein PA0964 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG04353.1|AE004530_6 (AE004530) conserved hypothetical protein [Pseudomonas aeruginosa]
Length = 248
Score = 114 bits (284), Expect = 1e-24
Identities = 79/232 (34%), Positives = 122/232 (52%), Gaps = 10/232 (4%)
Query: 12 KEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKR- 70
KE++ K K+F KL + +T+AA+ GG P N +LR A+ A NM +D ID AI R
Sbjct: 14 KERQDAKKGKIFTKLIRELTVAARQGGGVPADNPRLRLAVDKALTANMTRDTIDRAIARG 73
Query: 71 -ASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEF 129
S+ N+ E++YEG A GV II+E MTDN RT A ++ F+K G ++ +GS+ +
Sbjct: 74 VGSNDADNMVELSYEGYAPSGVAIIVEAMTDNRNRTAAEVRHAFSKC-GGNLGTDGSVAY 132
Query: 130 MFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED-KIIIRGDYNSFKLLNEG 188
MF RK E E L A ++ G +++ +D I + + F +NE
Sbjct: 133 MFERKGQISFAPGVDE------EALMDAALEAGADDVVVNDDGSIDVFTTFADFISVNEA 186
Query: 189 FESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ +A + I +T L+ E + KL+D +ED DDV +Y+N +
Sbjct: 187 LAAAGFKGDEAEVTMIPSTTATLDLETAQKVLKLIDMLEDLDDVQNVYSNAD 238
>ref|NP_625800.1| (NC_003888) conserved hypothetical protein SCL2.11c [Streptomyces
coelicolor A3(2)]
emb|CAB70923.1| (AL137778) conserved hypothetical protein SCL2.11c [Streptomyces
coelicolor A3(2)]
Length = 250
Score = 113 bits (283), Expect = 2e-24
Identities = 69/226 (30%), Positives = 116/226 (50%), Gaps = 9/226 (3%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKE-- 75
K K+F KL K I +AA+ GG + + N L AI AK Q++P NID+A+KR E
Sbjct: 20 KRGKLFAKLIKNIEVAARMGGVDIEGNPTLYDAIQKAKKQSVPNKNIDSAVKRGGGLEAG 79
Query: 76 -GNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRK 134
+ I YEG GV +++EC+TDN R ++++ + G S+ GS+ ++FNRK
Sbjct: 80 GADYETIMYEGYGPNGVAVLIECLTDNRNRAASDVRVAMTR-NGGSMADPGSVSYLFNRK 138
Query: 135 SVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKL 194
V K E L+ +D+ A++D G EE+ ++ + + + + + +
Sbjct: 139 GVVIVPKGE-----LAEDDVLGAVLDAGAEEVNDLGESFEVLSEATDLVAVRTALQEAGI 193
Query: 195 PILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
A + T +EL++E +L+D +ED DDV ++ N +
Sbjct: 194 DYESADANFVPTMQVELDEEGARKIFRLIDALEDSDDVQNVFANFD 239
>ref|NP_214082.1| (NC_000918) hypothetical protein [Aquifex aeolicus]
sp|O67517|YF75_AQUAE Hypothetical protein AQ_1575
pir||C70436 conserved hypothetical protein aq_1575 - Aquifex aeolicus
gb|AAC07491.1| (AE000746) hypothetical protein [Aquifex aeolicus]
Length = 249
Score = 113 bits (282), Expect = 2e-24
Identities = 78/223 (34%), Positives = 119/223 (52%), Gaps = 9/223 (4%)
Query: 21 KVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKR-ASSKEG-NL 78
K+F KL + I +A + GG P+ N +LRTAI AK NMP +NI+ AIK+ A EG
Sbjct: 23 KLFSKLIREIIVATRLGGPNPEFNPRLRTAIEQAKKANMPWENIERAIKKGAGELEGEQF 82
Query: 79 SEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFE 138
E+ YEG A GV +++ TDN RT + ++ F K G ++ +G + ++F RK E
Sbjct: 83 EEVIYEGYAPGGVAVMVLATTDNRNRTTSEVRHVFTK-HGGNLGASGCVSYLFERKGYIE 141
Query: 139 CLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILK 198
EV S E+L I+ G E+++ E+ II + E E L +PI K
Sbjct: 142 VPAKEV-----SEEELLEKAIEVGAEDVQPGEEVHIIYTVPEELYEVKENLEKLGVPIEK 196
Query: 199 ASLQRIATTPIELNDEQ-MELTEKLLDRIEDDDDVVALYTNIE 240
A + + +++NDE+ + KLL+ +E+ DDV + N E
Sbjct: 197 AQITWKPISTVQINDEETAQKVIKLLNALEELDDVQQVIANFE 239
>ref|NP_078129.1| (NC_002162) conserved hypothetical [Ureaplasma urealyticum]
pir||D82908 conserved hypothetical UU295 [imported] - Ureaplasma urealyticum
gb|AAF30704.1|AE002127_2 (AE002127) conserved hypothetical [Ureaplasma urealyticum]
Length = 236
Score = 113 bits (282), Expect = 2e-24
Identities = 78/231 (33%), Positives = 123/231 (52%), Gaps = 14/231 (6%)
Query: 14 KRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASS 73
K+ + +K++ K AK I AAK GG P+ N++L+ AI A N+ +D+I+ I AS
Sbjct: 13 KKQQQQAKIWMKCAKEIKAAAKMGGPNPEANSRLKVAIERALNNNLSRDSIERNINGASK 72
Query: 74 KEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNR 133
NL E+TYEG G+ II+ +TDN RTI+ ++ YF+K QG PN S+ +FN
Sbjct: 73 DIDNLKELTYEGYGPNGLAIIVRALTDNEQRTISAIRGYFSKLQGQIAKPN-SVSMLFN- 130
Query: 134 KSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKII----IRGDYNSFKLLNEGF 189
EC + + SL++ LID + ++ E +DKII D+++ KL+
Sbjct: 131 ----ECGQLLINKETKSLDEWFEILIDQSIIDINE-DDKIIEILVKPEDFSTVKLI---L 182
Query: 190 ESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
E I A ++ I I L++ E + ++ E+DDD+ + TN E
Sbjct: 183 EKNNADIKSAEIKLIPNDFISLDEYARERLVRFVNACENDDDISWVITNYE 233
>pir||JC5479 hypothetical protein, 26K - Pseudomonas aeruginosa
dbj|BAA11816.1| (D83138) unknown [Pseudomonas aeruginosa]
Length = 248
Score = 113 bits (282), Expect = 2e-24
Identities = 80/233 (34%), Positives = 123/233 (52%), Gaps = 11/233 (4%)
Query: 12 KEKRWD-KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKR 70
+E+R D K K+F KL + +T+AA+ GG P N +LR A+ A NM +D ID AI R
Sbjct: 13 REERQDAKKGKIFTKLIRELTVAARQGGGVPADNPRLRLAVDKALTANMTRDTIDRAIAR 72
Query: 71 --ASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLE 128
S+ N+ E++YEG A GV II+E MTDN RT A ++ F+K G ++ +GS+
Sbjct: 73 GVGSNDADNMVELSYEGYAPSGVAIIVEAMTDNRNRTAAEVRHAFSKC-GGNLGTDGSVA 131
Query: 129 FMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED-KIIIRGDYNSFKLLNE 187
+MF RK E E L A ++ G +++ +D I + + F +NE
Sbjct: 132 YMFERKGQISFAPGVDE------EALMDAALEAGADDVVVNDDGSIDVFTTFADFISVNE 185
Query: 188 GFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ +A + I +T L+ E + KL+D +ED DDV +Y+N +
Sbjct: 186 ALAAAGFKGDEAEVTMIPSTTATLDLETAQKVLKLIDMLEDLDDVQNVYSNAD 238
>ref|NP_360318.1| (NC_003103) unknown [Rickettsia conorii]
gb|AAL03219.1| (AE008627) unknown [Rickettsia conorii]
Length = 295
Score = 112 bits (280), Expect = 3e-24
Identities = 86/240 (35%), Positives = 132/240 (54%), Gaps = 15/240 (6%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSE-PDTNAKLRTAILNAKAQNMPKDNI 64
++R+ A++K K +KVF KL + I AAK G S P+ N +LR A+ A++QN+PK+ I
Sbjct: 53 QHRKGAQDK---KRAKVFTKLIREIVTAAKTGSSNNPENNPRLRNALTAARSQNLPKERI 109
Query: 65 DAAIKRA--SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIV 122
D AI A SS N +EI YEG A G+ II+E +TDN RT A ++S F K G S+
Sbjct: 110 DKAINSANDSSNNENYTEIRYEGYAPNGIAIIVEALTDNKNRTAAEVRSSFTK-YGGSLG 168
Query: 123 PNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSF 182
GS+ ++FN V + N N +D+ A+I+ G ++ + I D +F
Sbjct: 169 ETGSVNYLFNHCGVIQYPINIASN-----KDILEAVIEAGGHDIISDDTTHTIYTDIENF 223
Query: 183 KLLNEGFESLKLPILKAS-LQRIATTPIELND-EQMELTEKLLDRIEDDDDVVALYTNIE 240
+ E F + K I + S + I I ++D E+ E KL++ +E+ DDV ++ N E
Sbjct: 224 SKVLE-FLTGKYGIPEDSYIGWIPLNTIIIDDKEKAEKLLKLVEVLEESDDVQRVFGNYE 282
>ref|NP_456466.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
ref|NP_460856.1| (NC_003197) putative cytoplasmic protein [Salmonella typhimurium
LT2]
gb|AAL20815.1| (AE008784) putative cytoplasmic protein [Salmonella typhimurium
LT2]
emb|CAD05650.1| (AL627272) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 246
Score = 112 bits (280), Expect = 3e-24
Identities = 76/239 (31%), Positives = 129/239 (53%), Gaps = 18/239 (7%)
Query: 7 YRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDA 66
+R+AA++ K K+F K+ + + AAK GG +PD N +LR A+ A A NM +D ++
Sbjct: 12 HRKAAQDA---KRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALANNMTRDTLNR 68
Query: 67 AIKR--ASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPN 124
AI R ++ N+ I YEG G I++EC++DN RT+A ++ F+K G ++ +
Sbjct: 69 AIARGVGGDEDSNMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKC-GGNLGTD 127
Query: 125 GSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKL 184
GS+ ++F++K V K + + + +E AL + G E++ +D I Y +++
Sbjct: 128 GSVAYLFSKKGVISFEKGDEDTI------MEAAL-EAGAEDVVTYDDGAI--DVYTAWEE 178
Query: 185 LNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLL---DRIEDDDDVVALYTNIE 240
+ + ++L+ LKA ++ P D E KLL D +ED DDV +Y N E
Sbjct: 179 MGKVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLLRLIDMLEDCDDVQEVYHNGE 237
>ref|NP_299192.1| (NC_002488) conserved hypothetical protein [Xylella fastidiosa
9a5c]
pir||A82624 conserved hypothetical protein XF1906 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF84712.1|AE004010_9 (AE004010) conserved hypothetical protein [Xylella fastidiosa 9a5c]
Length = 244
Score = 112 bits (279), Expect = 5e-24
Identities = 81/243 (33%), Positives = 126/243 (51%), Gaps = 13/243 (5%)
Query: 2 GRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPK 61
G + E R+ A + K K+F K+ + I +AA+ GG +P N LR I A A NM K
Sbjct: 4 GPSIEARKNASDS---KRGKIFTKIIRQIGVAARAGGGDPSNNPSLRVVIDKALASNMSK 60
Query: 62 DNIDAAIKRA-SSKEG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
D I+ AIK+A EG E+ YEG A GV +I++C+TDN RT+++++ F+K G
Sbjct: 61 DVIERAIKKAIGEMEGVQYEEVRYEGYAPGGVAVIVDCLTDNRLRTVSDVRHAFSKC-GG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEE--LEEVEDKIIIRG 177
++ GS+ FMF R V + E + A ID G E+ + +D+I +
Sbjct: 120 NMGTEGSVAFMFKRLGVLSYAHAIADE-----ERITEAAIDAGAEDVMVYTEDDEIEVIT 174
Query: 178 DYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYT 237
+F + E +L L A + A + I ++ + KLLD +ED DDV +Y+
Sbjct: 175 TPEAFSRVKEEMAALGLMPYHAQITFRADSDIVVDGDTAIQVRKLLDILEDLDDVQDVYS 234
Query: 238 NIE 240
N++
Sbjct: 235 NVD 237
>ref|NP_469733.1| (NC_003212) conserved hypothetical protein, highly similar to B.
subtilis YeeI protein [Listeria innocua]
emb|CAC95621.1| (AL596164) conserved hypothetical protein, highly similar to B.
subtilis YeeI protein [Listeria innocua]
Length = 239
Score = 111 bits (277), Expect = 8e-24
Identities = 75/242 (30%), Positives = 133/242 (53%), Gaps = 8/242 (3%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + + K + S+++ K I +AAK G +P +N KLR I AK N+P
Sbjct: 1 MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K ID AI++A + + SE+ YEG G +II++ +T+N RT +++++ ++K G
Sbjct: 61 KHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSK-NGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
++ +GS+ +MF+ ++F + + L LE L A ID + ++ + + + II +
Sbjct: 120 NMGVSGSVAYMFDNTAIFGVEGKDADEL---LELLMEADID--VRDILDEDGQAIIYAEP 174
Query: 180 NSFKLLNEGFESLKL-PILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTN 238
F + EG ++ + A ++ I I+L+ E +E EKL+D +ED +DV +Y N
Sbjct: 175 EDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKLIDALEDLEDVQKVYHN 234
Query: 239 IE 240
+E
Sbjct: 235 VE 236
>ref|NP_288301.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_310601.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG56854.1|AE005408_12 (AE005408) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB35997.1| (AP002559) hypothetical protein [Escherichia coli O157:H7]
Length = 246
Score = 110 bits (276), Expect = 1e-23
Identities = 72/237 (30%), Positives = 126/237 (52%), Gaps = 14/237 (5%)
Query: 7 YRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDA 66
+R+AA++ K K+F K+ + + AAK GG +PD N +LR AI A + NM +D ++
Sbjct: 12 HRKAAQDA---KRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAIDKALSNNMTRDTLNR 68
Query: 67 AIKR--ASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPN 124
AI R + N+ I YEG G I++EC++DN RT+A ++ F+K G ++ +
Sbjct: 69 AIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKC-GGNLGTD 127
Query: 125 GSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKII-IRGDYNSFK 183
GS+ ++F++K V K + + + +E AL + G E++ +D I + +
Sbjct: 128 GSVAYLFSKKGVISFEKGDEDTI------MEAAL-EAGAEDVVTYDDGAIDVYTAWEEMG 180
Query: 184 LLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ + E+ L A + I +T +++ E +L+D +ED DDV +Y N E
Sbjct: 181 KVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGE 237
>ref|NP_416378.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P24237|YEBC_ECOLI Protein yebC
pir||C38113 yebC protein - Escherichia coli
emb|CAA42126.1| (X59551) ORF246 [Escherichia coli]
dbj|BAA01031.1| (D10165) Orf26 [Escherichia coli]
dbj|BAA15675.1| (D90829) ORF_ID:o337#5~similar to [PIR Accession Number C38113]
[Escherichia coli]
gb|AAC74934.1| (AE000280) orf, hypothetical protein [Escherichia coli K12]
Length = 246
Score = 110 bits (275), Expect = 1e-23
Identities = 71/237 (29%), Positives = 126/237 (52%), Gaps = 14/237 (5%)
Query: 7 YRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDA 66
+R+AA++ K K+F K+ + + AAK GG +PD N +LR A+ A + NM +D ++
Sbjct: 12 HRKAAQDA---KRGKIFTKIIRELVTAAKLGGGDPDANPRLRAAVDKALSNNMTRDTLNR 68
Query: 67 AIKR--ASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPN 124
AI R + N+ I YEG G I++EC++DN RT+A ++ F+K G ++ +
Sbjct: 69 AIARGVGGDDDANMETIIYEGYGPGGTAIMIECLSDNRNRTVAEVRHAFSKC-GGNLGTD 127
Query: 125 GSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKII-IRGDYNSFK 183
GS+ ++F++K V K + + + +E AL + G E++ +D I + +
Sbjct: 128 GSVAYLFSKKGVISFEKGDEDTI------MEAAL-EAGAEDVVTYDDGAIDVYTAWEEMG 180
Query: 184 LLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ + E+ L A + I +T +++ E +L+D +ED DDV +Y N E
Sbjct: 181 KVRDALEAAGLKADSAEVSMIPSTKADMDAETAPKLMRLIDMLEDCDDVQEVYHNGE 237
>gb|AAD51398.1|AF117715_7 (AF117715) YebC [Legionella pneumophila]
Length = 238
Score = 110 bits (275), Expect = 1e-23
Identities = 68/225 (30%), Positives = 119/225 (52%), Gaps = 9/225 (4%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKR-ASSKEG 76
K K+F KL + IT+AA+ GG + +N +LR A+ A NM +D ID A+KR +G
Sbjct: 20 KRGKIFTKLIREITVAARMGGGDESSNPRLRDAVKKALNANMKRDTIDNAVKRGVGGVDG 79
Query: 77 N-LSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKS 135
+ + YEG GV I+++C++DN RT++ ++ F+K G ++ +GS+ ++F +
Sbjct: 80 EAMIAMRYEGYGPGGVAILVDCLSDNKNRTVSEVRHAFSK-HGGNLGTDGSVSYLFTNQG 138
Query: 136 VFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLP 195
N+ E+ + + ID G ++ + +I I ++ + + L
Sbjct: 139 EILMASNQPEDKVMEI------AIDAGASDVAVEDGQIEIITPVEAYHTVLNALQDAGLE 192
Query: 196 ILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ ++ L A T + +NDE E KL+D +ED DDV +Y+N E
Sbjct: 193 VEQSHLTMRAQTLVPINDETAESLIKLIDMLEDLDDVQEVYSNAE 237
>ref|NP_520311.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD15897.1| (AL646068) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 241
Score = 110 bits (274), Expect = 2e-23
Identities = 80/236 (33%), Positives = 120/236 (49%), Gaps = 13/236 (5%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNID 65
++++AA + K K++ +L K IT+AA+ GG + D+N +LR AI NMPKDNI
Sbjct: 11 KHKKAAADA---KRGKIWTRLIKEITVAARLGGGDVDSNPRLRLAIDKGTDANMPKDNIQ 67
Query: 66 AAIKR-ASSKEG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
AI+R EG + EI YEG G II++CMTDN TRT+A ++ F+K G ++
Sbjct: 68 RAIQRGVGGLEGAHYEEIRYEGYGISGAAIIVDCMTDNRTRTVAEVRHAFDK-HGGNMGT 126
Query: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED-KIIIRGDYNSF 182
GS+ FMF+ F E + L A ++ G E++ +D I + N F
Sbjct: 127 QGSVAFMFDHVGQFIFAPGTPE------DKLMDAALEAGAEDVVTNDDGSIEVLCPPNDF 180
Query: 183 KLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTN 238
+ E A + T +E + +KLLD +E+ DDV +YTN
Sbjct: 181 AKVKAALEGAGFKAELAEVIMKPQTEVEFTGDDAAKMQKLLDALENLDDVQEVYTN 236
>ref|NP_463899.1| (NC_003210) conserved hypothetical protein, highly similar to B.
subtilis YeeI protein [Listeria monocytogenes EGD-e]
emb|CAC98448.1| (AL591975) conserved hypothetical protein, highly similar to B.
subtilis YeeI protein [Listeria monocytogenes]
Length = 239
Score = 110 bits (274), Expect = 2e-23
Identities = 74/242 (30%), Positives = 133/242 (54%), Gaps = 8/242 (3%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + + K + S+++ K I +AAK G +P +N KLR I AK N+P
Sbjct: 1 MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHSNQKLRFVIERAKTYNVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K ID AI++A + + SE+ YEG G +II++ +T+N RT +++++ ++K G
Sbjct: 61 KHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNNVNRTASDVRAAYSK-NGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
++ +GS+ +MF+ ++F + + L LE L A ID + ++ + + + II +
Sbjct: 120 NMGVSGSVAYMFDNTAIFGVEGKDADEL---LELLMEADID--VRDILDEDGQAIIYAEP 174
Query: 180 NSFKLLNEGFESLKL-PILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTN 238
F + EG ++ + A ++ I I+L+ E +E E+L+D +ED +DV +Y N
Sbjct: 175 EDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFERLIDALEDLEDVQKVYHN 234
Query: 239 IE 240
+E
Sbjct: 235 VE 236
>ref|NP_232407.1| (NC_002506) conserved hypothetical protein [Vibrio cholerae]
pir||G82512 conserved hypothetical protein VCA0006 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF95920.1| (AE004344) conserved hypothetical protein [Vibrio cholerae]
Length = 239
Score = 109 bits (272), Expect = 3e-23
Identities = 79/245 (32%), Positives = 123/245 (49%), Gaps = 13/245 (5%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR+FE R+A+ K KV+ K K I + AK+GG++PD N LR I AK +P
Sbjct: 1 MGRSFEVRKASMAKTQGAKIKVYSKYGKEIYVCAKNGGTDPDMNLSLRHLITKAKKDQVP 60
Query: 61 KDNIDAAIKRASSKEG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
I+ A+ +AS G + YEG G +I++C+TDN RT +++ F KT GA
Sbjct: 61 AHVIEKALDKASGGAGEDYQPARYEGFGPGGASVIVDCLTDNGNRTYQDVRQCFVKT-GA 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
I G + MF+ ++VF+ ++ E + LE L A D + ++E + I +
Sbjct: 120 KIGTPGVVAHMFDHQAVFQFQGDDEEAI---LEALMMA--DAEVTDIEHEDGVITVFAPN 174
Query: 180 NSF----KLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVAL 235
F LNE F L L + + + + ++ E E +K LD ++D DDV +
Sbjct: 175 TEFFKVKTALNEAFPDLTLDVEEITF--VPQNRTVVSGEDAEKFQKFLDMLDDCDDVQQV 232
Query: 236 YTNIE 240
Y N +
Sbjct: 233 YHNAD 237
>ref|NP_488316.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB75975.1| (AP003595) ORF_ID:all4276~hypothetical protein [Nostoc sp. PCC
7120]
Length = 252
Score = 109 bits (272), Expect = 3e-23
Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 13/229 (5%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEG- 76
K K F +L++AI LAA+ G +P N +LRTAI AKA +P DNI+ AI + + G
Sbjct: 20 KKGKTFTQLSRAIILAARSGVPDPSGNFQLRTAIDKAKAAGIPNDNIERAIAKGAGTFGG 79
Query: 77 ---NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNR 133
+L EI YEG GV I++E +TDN RT A+L+ F+K G ++ G + +MF++
Sbjct: 80 DNASLEEIRYEGYGPGGVAILIEALTDNRNRTAADLRVAFSK-NGGNLGETGCVSWMFDQ 138
Query: 134 KSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKII-IRGDYNSFKLLNEGFESL 192
K V C+ + V + LE A ++ G E E ED+ + + + ++LN+ +
Sbjct: 139 KGV--CVVSGVVDEDQLLE----ASLEGGAESYEMTEDETAEVFTEVANLEILNQTLKDQ 192
Query: 193 KLPILKASLQRIATTPIELND-EQMELTEKLLDRIEDDDDVVALYTNIE 240
+ A L+ I + +E+ + +Q KL+D +E DDV + +N E
Sbjct: 193 GFKVTDAELRWIPSNHLEVTEPDQARSLLKLIDTLEGLDDVQNVTSNFE 241
>dbj|BAA09118.1| (D50551) hypothetical protein YrbC [Bacillus subtilis]
Length = 154
Score = 109 bits (272), Expect = 3e-23
Identities = 56/119 (47%), Positives = 80/119 (67%), Gaps = 3/119 (2%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGN 77
K K+F KLAK I +AAK+GG++P+ N+ LR I AK NMP +NID AIK+A+ +
Sbjct: 20 KRGKIFMKLAKEIYVAAKEGGADPEANSALRLVIEKAKGANMPNENIDRAIKKAAGGQDG 79
Query: 78 LS--EITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRK 134
S EITYEG G+ +++EC+TDN RT +N+++ FNK G S+ +G + F+F RK
Sbjct: 80 SSYEEITYEGYGPSGIAVMVECVTDNKNRTASNVRTAFNK-NGGSLGESGCVAFLFERK 137
>gb|AAF22218.1|AF140575_3 (AF140575) unknown [Mycoplasma hyopneumoniae]
Length = 242
Score = 108 bits (271), Expect = 4e-23
Identities = 72/227 (31%), Positives = 117/227 (50%), Gaps = 14/227 (6%)
Query: 20 SKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRAS---SKEG 76
+K+F K +K I +A GGS+P++N LR I A+A++MPK NI+ AI + S
Sbjct: 22 AKIFNKFSKEIMVAVAKGGSDPNSNPALRLIISKARAKSMPKSNIEKAIAKGEGSISNGE 81
Query: 77 NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSV 136
N EI Y G + G+ +I+ +TDN R IA+L++ F + G I S+ ++F +K
Sbjct: 82 NFKEIIYSGTLSHGISVIVVILTDNINRAIASLQALFRRANG-QIGKQNSIPYLFEQKGY 140
Query: 137 FECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPI 196
E KN ++ +DL +D G E+ + E+ +I L E P
Sbjct: 141 LEIEKNNLDE-----DDLMLFSLDNGAEDFQSDEENYMIYCQPRKISELKNEIEKKFSPN 195
Query: 197 LKASLQRIATTPIELNDEQMELTEKLLDRIE---DDDDVVALYTNIE 240
+A I+ P E + E TEK+L++I+ DD+D+ +Y N++
Sbjct: 196 FRA--VEISYFPNEWVELDQENTEKILNQIDNFLDDEDIQNVYHNLK 240
>ref|NP_600875.1| (NC_003450) COG0217:Uncharacterized ACR [Corynebacterium
glutamicum]
dbj|BAB99056.1| (AP005279) Uncharacterized ACR [Corynebacterium glutamicum ATCC
13032]
Length = 251
Score = 108 bits (270), Expect = 5e-23
Identities = 71/238 (29%), Positives = 120/238 (49%), Gaps = 12/238 (5%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNID 65
++++AA + K K F KL K I +AA+ GG +P N L I AK ++P DNI+
Sbjct: 11 KHKKAANDA---KRGKEFAKLIKNIEVAARTGGGDPSANPTLDDMIKKAKKASVPNDNIE 67
Query: 66 AAIKRASSKEGNLSE---ITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIV 122
A KR S +E ++ I YEG GV +++EC+TDN R +++ K G ++
Sbjct: 68 RARKRGSGEEAGGADWMNIMYEGYGPNGVAMLIECLTDNRNRAATEVRTAMTK-NGGNLG 126
Query: 123 PNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSF 182
+GS+ +MF R V K + LS +D+ A+++ G EE+ + D +
Sbjct: 127 ESGSVSYMFTRTGVVTVQKGD-----LSEDDVLMAVLEAGAEEVNDNGDLFEVTCAPTDI 181
Query: 183 KLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ + + + + + A+ + L+ + KL+D +ED DDV +YTNI+
Sbjct: 182 QAVRDALVEAGIEVEDSESDFRASVQVPLDADGARKIFKLVDALEDSDDVQNVYTNID 239
>ref|NP_288492.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_310807.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG57046.1|AE005424_4 (AE005424) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB36203.1| (AP002559) hypothetical protein [Escherichia coli O157:H7]
Length = 238
Score = 108 bits (270), Expect = 5e-23
Identities = 81/244 (33%), Positives = 126/244 (51%), Gaps = 14/244 (5%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + A K + SK++ K I AAK G +P+ N L+ I AK +P
Sbjct: 1 MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K ID AI +A + + YEG G +II E +T N RTIAN+++ FNK +G
Sbjct: 61 KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNK-KGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
+I GS+ +MF+ V ++ +++ E L A +D + ++ E E I+I Y
Sbjct: 120 NIGAAGSVSYMFDNTGVIVFKGSDPDHI---FEILLEAEVD--VRDVTEEEGNIVI---Y 171
Query: 180 NSFKLLNEGFESLKLPILK----ASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVAL 235
L++G +LK + L+ IA + +EL+ E +E+ E L+D +EDDDDV +
Sbjct: 172 TEPTDLHKGIAALKAAGISEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKV 231
Query: 236 YTNI 239
Y N+
Sbjct: 232 YHNV 235
>ref|NP_463358.1| (NC_003197) putative cytoplasmic protein [Salmonella typhimurium
LT2]
gb|AAL23317.1| (AE008911) putative cytoplasmic protein [Salmonella typhimurium
LT2]
Length = 241
Score = 108 bits (269), Expect = 7e-23
Identities = 78/244 (31%), Positives = 125/244 (50%), Gaps = 14/244 (5%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
+GR + A K + SKV+ K I AAK G +P++N+ L+ I AK +P
Sbjct: 4 VGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSALKFVIERAKQAQVP 63
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K ID AI +A + + YEG G ++I E +T N RTIAN+++ FNK +G
Sbjct: 64 KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMVIAETLTSNVNRTIANIRTIFNK-KGG 122
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
+I G++ +MF+ V + +++ L D E + ++ E E I+I Y
Sbjct: 123 NIGAAGAVSYMFDNTGVIVFKGTDPDHIFEILLDAE-----VDVRDVTEEEGNIVI---Y 174
Query: 180 NSFKLLNEGFESLKLPILK----ASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVAL 235
L++G +LK + L+ IA + +EL+ E +E+ E L+D +EDDDDV +
Sbjct: 175 TEATDLHKGIAALKAAGISEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKV 234
Query: 236 YTNI 239
Y N+
Sbjct: 235 YHNV 238
>ref|NP_416490.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P76351|YEEN_ECOLI Hypothetical protein yeeN
pir||A64963 conserved hypothetical protein b1983 - Escherichia coli
gb|AAC75047.1| (AE000290) orf, hypothetical protein [Escherichia coli K12]
Length = 238
Score = 107 bits (268), Expect = 9e-23
Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 14/244 (5%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + A K + SK++ K I AAK G +P+ N L+ I AK +P
Sbjct: 1 MGRKWANIVAKKTAKDGATSKIYAKFGVEIYAAAKQGEPDPELNTSLKFVIERAKQAQVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K ID AI +A + + YEG G +II E +T N RTIAN+++ FNK +G
Sbjct: 61 KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMIIAETLTSNVNRTIANVRTIFNK-KGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
+I GS+ +MF+ V + +++ E L A +D + ++ E E I+I Y
Sbjct: 120 NIGAAGSVSYMFDNTGVIVFKGTDPDHI---FEILLEAEVD--VRDVTEEEGNIVI---Y 171
Query: 180 NSFKLLNEGFESLK----LPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVAL 235
L++G +LK L+ IA + +EL+ E +E+ E L+D +EDDDDV +
Sbjct: 172 TEPTDLHKGIAALKAAGITEFSTTELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKV 231
Query: 236 YTNI 239
Y N+
Sbjct: 232 YHNV 235
>ref|NP_405607.1| (NC_003143) conserved hypothetical protein [Yersinia pestis]
emb|CAC90867.1| (AJ414151) conserved hypothetical protein [Yersinia pestis]
Length = 247
Score = 107 bits (268), Expect = 9e-23
Identities = 68/238 (28%), Positives = 124/238 (51%), Gaps = 13/238 (5%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNID 65
++R+AA++ K K+F K+ + + AA+ GG +P N +LR AI A + NM +D ++
Sbjct: 11 KHRKAAQDA---KRGKIFTKIIRELVTAARLGGGDPGANPRLRAAIDKALSNNMTRDTLN 67
Query: 66 AAIKR--ASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
AI R ++ N+ I YEG G +++EC++DN RT++ ++ F KT G ++
Sbjct: 68 RAIARGVGGDEDNNMETIIYEGYGPGGTAVMVECLSDNRNRTVSEVRHAFTKT-GGNLGT 126
Query: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKII-IRGDYNSF 182
+GS+ ++F +K V E+ + A ++ G +++ +D I + + S
Sbjct: 127 DGSVSYLFTKKGVISYAPGLEEDTVMD------AALEAGADDIVVYDDGAIDVFTAWESL 180
Query: 183 KLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ + ++ L A + I +T EL+ E +L+D +ED DDV +Y N E
Sbjct: 181 GAVKDALDATGLVAEGAEVSLIPSTKAELDAETAPKLLRLIDMLEDSDDVQEVYHNGE 238
>ref|NP_458924.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD06974.1| (AL627283) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 241
Score = 107 bits (268), Expect = 9e-23
Identities = 78/244 (31%), Positives = 124/244 (49%), Gaps = 14/244 (5%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
+GR + A K + SKV+ K I AAK G +P++N+ L+ I AK +P
Sbjct: 4 VGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSALKFVIERAKQAQVP 63
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K ID AI +A + + YEG G ++I E +T N RTIAN+++ FNK +G
Sbjct: 64 KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMVIAETLTSNVNRTIANIRTIFNK-KGG 122
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
+I G++ +MF+ V + +++ L D E + ++ E E I+I Y
Sbjct: 123 NIGAAGAVSYMFDNTGVIVFKGTDPDHIFEILLDAE-----VDVRDVTEEEGNIVI---Y 174
Query: 180 NSFKLLNEGFESLK----LPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVAL 235
L++G +LK L+ IA + +EL+ E +E+ E L+D +EDDDDV +
Sbjct: 175 TEATDLHKGIAALKAAGITEFSTTELEMIAQSDVELSPEDLEIFEGLVDALEDDDDVQKV 234
Query: 236 YTNI 239
Y N+
Sbjct: 235 YHNV 238
>gb|AAK19837.1|AF331924_2 (AF038651) hypothetical structural protein [Corynebacterium
glutamicum]
Length = 251
Score = 107 bits (267), Expect = 1e-22
Identities = 71/238 (29%), Positives = 119/238 (49%), Gaps = 12/238 (5%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNID 65
++++AA + K K F KL K I +AA+ GG +P N L I AK ++P DNI+
Sbjct: 11 KHKKAANDA---KRGKEFAKLIKNIEVAARTGGGDPSANPTLDDMIKKAKKASVPNDNIE 67
Query: 66 AAIKRASSKEGNLSE---ITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIV 122
A KR S +E ++ I YEG GV +++EC+TDN R +++ K G ++
Sbjct: 68 RARKRGSGEEAGGADWMNIMYEGYGPNGVAMLIECLTDNRNRAATEVRTAMTK-NGGNLG 126
Query: 123 PNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSF 182
+GS+ +MF R V K + LS +D+ A+++ G EE+ + D +
Sbjct: 127 ESGSVSYMFTRTGVVTVQKGD-----LSEDDVLMAVLEAGAEEVNDNGDLFEVTCAPTDI 181
Query: 183 KLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ + + + + A+ + L+ + KL+D +ED DDV +YTNI+
Sbjct: 182 VAVRDAIVEAGIEVEDSESDFRASVQVPLDADGARKIFKLVDALEDSDDVQNVYTNID 239
>ref|NP_643459.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37995.1| (AE011959) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 242
Score = 107 bits (266), Expect = 1e-22
Identities = 75/243 (30%), Positives = 128/243 (51%), Gaps = 14/243 (5%)
Query: 2 GRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPK 61
G + E R+ A + K K+F K+ + I++AA+ GG +P N +LRTA+ + NM K
Sbjct: 4 GPSIEGRKNASDA---KRGKMFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSSNMSK 60
Query: 62 DNIDAAIKRASSK-EG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
D ++ AIK+++ + EG E+ YEG A GV +I++C+TDN RT+A+++ F+K G
Sbjct: 61 DVMERAIKKSTGELEGVEYEEVRYEGYAPGGVAVIVDCLTDNRVRTVADVRHAFSKC-GG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEE--LEEVEDKIIIRG 177
++ GS+ FMF R V + + L A ID G ++ + + I +
Sbjct: 120 NMGTEGSVAFMFKRLGVLSFAAG------IDEDTLTDAAIDAGADDVVVYPEDGAIDVLT 173
Query: 178 DYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYT 237
++F + + + L A + A I ++ + KLLD +ED DDV +Y+
Sbjct: 174 APDAFAQVRDALVATGLEPAHAEITFRADNDIAVDGDTAVQVRKLLDMLEDLDDVQDVYS 233
Query: 238 NIE 240
N++
Sbjct: 234 NVD 236
>ref|NP_245917.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK03064.1| (AE006137) unknown [Pasteurella multocida]
Length = 246
Score = 107 bits (266), Expect = 1e-22
Identities = 72/239 (30%), Positives = 126/239 (52%), Gaps = 16/239 (6%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNID 65
++R+AA++ + K+F KL + + AAK GG + + N +LRTA+ A + NM +D I+
Sbjct: 11 KHRKAAQDAQ---RGKIFTKLIRELVTAAKLGGGDVNANPRLRTAVDKALSSNMTRDTIN 67
Query: 66 AAIKR--ASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
AI+R + N+ YEG G +++EC++DN RTI+ ++ F K G ++
Sbjct: 68 RAIERGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKC-GGNLGT 126
Query: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLEDLEF-ALIDYGLEELEEVED-KIIIRGDYNS 181
GS+ ++F++K + + ED+ A I+ G ++++ ED + +
Sbjct: 127 EGSVGYLFSKKGLILITSGD--------EDVIMEAAIEAGADDVQVQEDGSFEVYTAWEE 178
Query: 182 FKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ +G ES + I A + I +T +EL+ E KL+D +ED DDV +Y N E
Sbjct: 179 LGAVRDGIESAGIKIDNAEVTMIPSTTVELDAETAPKLLKLIDMLEDCDDVQNVYHNGE 237
>ref|NP_654473.1| (NC_003995) DUF28, Domain of unknown function DUF28 [Bacillus
anthracis A2012] [Bacillus anthracis str. A2012]
Length = 239
Score = 106 bits (264), Expect = 2e-22
Identities = 68/243 (27%), Positives = 126/243 (50%), Gaps = 10/243 (4%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + + K + S+++ K + I +AAK G +P++N LR + AK N+P
Sbjct: 1 MGRKWNNIKDKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALRVVLERAKTYNVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
+ ID A+++A E N E+ YEG G ++I++ +T+N RT A++++ F+K G
Sbjct: 61 RTIIDRAVEKAKGGSEENYDELRYEGFGPNGAMVIVDTLTNNVNRTAADVRAAFSKNSG- 119
Query: 120 SIVPNGSLEFMFNRKSVFECL-KNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGD 178
++ NGS+ +MF+ +V K E L++ +E D ++ E ED +I+ +
Sbjct: 120 NMGVNGSVAYMFDATAVIGLEGKTSDEVLEILME------ADVDARDILEEEDAVIVYAE 173
Query: 179 YNSFKLLNEGFESLKL-PILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYT 237
+ F + + + A L +A + L ++ EK++D +ED +DV +Y
Sbjct: 174 PDQFHAVQSALKDAGVEEFTVAELTMLAQNDVTLPEDAQAQFEKMVDALEDLEDVQQVYH 233
Query: 238 NIE 240
N++
Sbjct: 234 NVD 236
>ref|NP_301420.1| (NC_002677) conserved hypothetical protein [Mycobacterium leprae]
sp|Q49645|YQ03_MYCLE Hypothetical protein ML0475
pir||S72730 yfcA protein - Mycobacterium leprae
gb|AAA17094.1| (U00011) u1177b; yfcA; B1177_C2_181 [Mycobacterium leprae]
emb|CAC29983.1| (AL583918) conserved hypothetical protein [Mycobacterium leprae]
Length = 251
Score = 106 bits (264), Expect = 2e-22
Identities = 71/228 (31%), Positives = 118/228 (51%), Gaps = 13/228 (5%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKE-- 75
+ K+F +L K I +AA+ GG +P N L AI AK ++P NI+ A KR + +E
Sbjct: 20 RRGKMFARLIKNIEVAARVGGGDPVGNPTLYDAIQKAKKSSVPNGNIERARKRGAGEEVG 79
Query: 76 -GNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRK 134
+ ITYEG A GV +++EC+TDN R ++ + GA P GS+ ++F+RK
Sbjct: 80 GADWQVITYEGYAPNGVAVLIECLTDNRNRAAGEVRVAMTRNGGAMADP-GSVAYLFSRK 138
Query: 135 SVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFE--SL 192
V KN L+ +D+ A++D G EE+ ++ D + + + + +
Sbjct: 139 GVVTLEKN-----GLTEDDVLAAVLDAGAEEVNDLGDSFEVIAEPGDLVAVRTALQDAGI 193
Query: 193 KLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+AS Q + P++L+ + KL+D +ED DDV ++TN +
Sbjct: 194 DYESAEASFQPSVSMPVDLDGARKVF--KLVDALEDSDDVHNVWTNAD 239
>ref|NP_244125.1| (NC_002570) BH3259~unknown conserved protein [Bacillus halodurans]
dbj|BAB06978.1| (AP001518) BH3259~unknown conserved protein [Bacillus halodurans]
Length = 239
Score = 105 bits (263), Expect = 3e-22
Identities = 67/243 (27%), Positives = 128/243 (52%), Gaps = 10/243 (4%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + + K + S+++ K + I +AAK G +P+ N L+ + AK N+P
Sbjct: 1 MGRKWNNIKEKKAAKDKNTSRIYAKFGREIYVAAKQGEPDPELNQALKFVLERAKTYNVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K I+ AI++A + E+ YEG G ++I++ +T+N RT + +++ F K G
Sbjct: 61 KAIIERAIEKAKGGSDETFDELRYEGFGPSGSMVIVDALTNNVNRTASEVRAAFGK-NGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECL-KNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGD 178
++ +GS+ +MF++ ++ K E + L+L +E D + +L + ++ I+ +
Sbjct: 120 NMGVSGSVAYMFDQTAIIGVQGKTEEDVLELLME------ADLDVRDLVQEDEVTIVYAE 173
Query: 179 YNSFKLLNEGFESLKL-PILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYT 237
+ F + E F+ + + A + I T + L+ E E EKL+D +ED +DV +Y
Sbjct: 174 PDQFHAVQEAFKQTGVEEFVVAEISMIPQTEVSLSQEDQEQFEKLIDVLEDLEDVQQVYH 233
Query: 238 NIE 240
N++
Sbjct: 234 NVD 236
>ref|NP_638374.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM42298.1| (AE012415) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 242
Score = 105 bits (261), Expect = 6e-22
Identities = 74/243 (30%), Positives = 127/243 (51%), Gaps = 14/243 (5%)
Query: 2 GRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPK 61
G + E R+ A + K K+F K+ + I++AA+ GG +P N +LRTA+ + NM K
Sbjct: 4 GPSIEGRKNASDA---KRGKIFTKIIREISVAARAGGGDPSNNPRLRTAMDKGLSSNMSK 60
Query: 62 DNIDAAIKRASSK-EG-NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
D I+ AIK+A+ + EG E+ YEG A GV +I++C+TDN R +A+++ F+K G
Sbjct: 61 DVIERAIKKATGELEGVEYEEVRYEGYAPGGVAVIVDCLTDNRVRAVADVRHAFSKC-GG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEE--LEEVEDKIIIRG 177
++ +GS+ FMF R V E + + A I+ G ++ + + I +
Sbjct: 120 NMGTDGSVAFMFKRLGVLSFAAGADE------DAVTEAAIEAGADDVVVYPEDGAIDVLT 173
Query: 178 DYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYT 237
++F + + + A + A I ++ + KLLD +ED DDV +Y+
Sbjct: 174 APDTFAQVKQALATAGFEPAHAEITFRAENDIAVDGDTAVQVRKLLDMLEDLDDVQDVYS 233
Query: 238 NIE 240
N++
Sbjct: 234 NVD 236
>ref|NP_217119.1| (NC_000962) hypothetical protein Rv2603c [Mycobacterium
tuberculosis H37Rv]
ref|NP_337180.1| (NC_002755) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
sp|O33214|YQ03_MYCTU Hypothetical protein Rv2603c
pir||F70500 hypothetical protein Rv2603c - Mycobacterium tuberculosis (strain
H37RV)
emb|CAB10838.1| (Z98045) hypothetical protein Rv2603c [Mycobacterium tuberculosis
H37Rv]
gb|AAK46994.1| (AE007101) conserved hypothetical protein [Mycobacterium
tuberculosis CDC1551]
Length = 251
Score = 104 bits (260), Expect = 7e-22
Identities = 67/228 (29%), Positives = 120/228 (52%), Gaps = 13/228 (5%)
Query: 18 KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGN 77
+ K+F +L K I +AA+ GG +P N L AI AK ++P +NI+ A KR + +E
Sbjct: 20 RRGKMFARLIKNIEVAARVGGGDPAGNPTLYDAIQKAKKSSVPNENIERARKRGAGEEAG 79
Query: 78 LSE---ITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRK 134
++ I YEG A GV +++EC+TDN R + ++ + G P GS+ ++F+RK
Sbjct: 80 GADWQTIMYEGYAPNGVAVLIECLTDNRNRAASEVRVAMTRNGGTMADP-GSVSYLFSRK 138
Query: 135 SVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFE--SL 192
V KN L+ +D+ A+++ G E++ ++ D + + + + +
Sbjct: 139 GVVTLEKN-----GLTEDDVLAAVLEAGAEDVNDLGDSFEVISEPAELVAVRSALQDAGI 193
Query: 193 KLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+AS Q + P++L+ + KL+D +ED DDV ++TN++
Sbjct: 194 DYESAEASFQPSVSVPVDLDGARKVF--KLVDALEDSDDVQNVWTNVD 239
>ref|NP_266388.1| (NC_002662) conserved hypothetical protein [Lactococcus lactis
subsp. lactis]
gb|AAK04330.1|AE006261_1 (AE006261) conserved hypothetical protein [Lactococcus lactis
subsp. lactis]
Length = 238
Score = 103 bits (257), Expect = 2e-21
Identities = 76/244 (31%), Positives = 122/244 (49%), Gaps = 14/244 (5%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + A K + SKV+ K I AAK G +P++N+ L+ I AK +P
Sbjct: 1 MGRKWANIVAKKTAKDGATSKVYAKFGVEIYAAAKQGEPDPESNSSLKFVIERAKQAQVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K ID AI +A + + YEG G ++I E +T N RTIAN+++ F+K G
Sbjct: 61 KHVIDKAIDKAKGGGDETFVQGRYEGFGPNGSMVIAETLTSNVNRTIANVRTTFHK-NGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
+I G++ +MF+ V + +++ L D E + ++ E E I++ Y
Sbjct: 120 NIGAAGAVSYMFDNTGVIVFEGTDPDHIFEILLDAE-----VDVRDVTEEEGNIVV---Y 171
Query: 180 NSFKLLNEGFESLK----LPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVAL 235
L++G +LK L+ I + +EL+ E +E+ E L+D +EDDDDV +
Sbjct: 172 TEPTDLHKGIAALKEAGITEFSTTELEMIPQSEVELSPEDLEIFEGLIDALEDDDDVQKV 231
Query: 236 YTNI 239
Y N+
Sbjct: 232 YHNV 235
>ref|NP_388566.1| (NC_000964) similar to hypothetical proteins [Bacillus subtilis]
sp|O31509|YEEI_BACSU Hypothetical protein yeeI
pir||C69793 conserved hypothetical protein yeeI - Bacillus subtilis
emb|CAB12504.1| (Z99107) similar to hypothetical proteins [Bacillus subtilis]
Length = 240
Score = 103 bits (256), Expect = 2e-21
Identities = 72/242 (29%), Positives = 129/242 (52%), Gaps = 7/242 (2%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + + K + S+++ K + I +AAK G +P++N L+ + AK ++P
Sbjct: 1 MGRKWNNIKEKKASKDANTSRIYAKFGREIYVAAKQGEPDPESNQALKVVLERAKTYSVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K+ I+ AI++A E N E+ YEG G +II++ +T+N RT +++ F K G
Sbjct: 61 KNIIERAIEKAKGGAEENYDELRYEGFGPNGSMIIVDALTNNVNRTAPEVRAAFGK-NGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
++ +GS+ +MF+ +V + E + +LE L A +D + LEE + +
Sbjct: 120 NMGVSGSVAYMFDATAV---IVVEGKTADEALEILMEADVDV-RDILEEDDSAKSCYAEP 175
Query: 180 NSFKLLNEGFESLKL-PILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTN 238
+ F + E F++ + A LQ +A + + L D+ E EKL+D +ED +DV +Y N
Sbjct: 176 DQFHAVQEAFKNAGVEEFTVAELQMLAQSEVTLPDDAKEQFEKLIDALEDLEDVQQVYHN 235
Query: 239 IE 240
++
Sbjct: 236 VD 237
>ref|NP_224769.1| (NC_000922) YebC family hypothetical protein [Chlamydophila
pneumoniae CWL029]
ref|NP_300628.1| (NC_002491) YebC family hypothetical protein [Chlamydophila
pneumoniae J138]
ref|NP_444727.1| (NC_002179) conserved hypothetical protein [Chlamydophila
pneumoniae AR39]
sp|Q9Z7Y0|Y573_CHLPN Hypothetical protein CPn0573/CP0176/CPj0573
pir||C72061 conserved hypothetical protein CP0176 [imported] - Chlamydophila
pneumoniae (strains CWL029 and AR39)
gb|AAD18713.1| (AE001642) YebC family hypothetical protein [Chlamydophila
pneumoniae CWL029]
gb|AAF38050.1| (AE002178) conserved hypothetical protein [Chlamydophila pneumoniae
AR39]
dbj|BAA98779.1| (AP002547) YebC family hypothetical protein [Chlamydophila
pneumoniae J138]
Length = 238
Score = 103 bits (256), Expect = 2e-21
Identities = 72/231 (31%), Positives = 124/231 (53%), Gaps = 10/231 (4%)
Query: 12 KEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRA 71
KE+ K K+F ++ K + A K GG++P +NA+LR I AK N+P +NI+ +K+A
Sbjct: 14 KERADHKKGKIFSRIIKELISAVKLGGADPKSNARLRMVIQKAKENNIPNENIERNLKKA 73
Query: 72 SSKE-GNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFM 130
+S E N E+TYE + GV II+E MTDN RT ++++ NK +G S+V GS+ +
Sbjct: 74 TSAEQKNFEEVTYELYGHGGVGIIVEAMTDNKNRTASDMRIAINK-RGGSLVEPGSVLYN 132
Query: 131 FNRKSVFECLKNEVENLKLSLEDLEFA-LIDYGLEELE-EVEDKIIIRGDYNSFKLLNEG 188
F RK K+ ++ E++ F+ I+ G E+L+ E E+ ++ + + E
Sbjct: 133 FARKGACTVAKSSID------EEVIFSYAIEAGAEDLDTEDEENFLVICAPSELASVKEK 186
Query: 189 FESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNI 239
S + L + ++ +++ E L+D +E +DV +Y N+
Sbjct: 187 LISQGATCSEDRLIYLPLRLVDCDEKDGEANLALIDWLEQIEDVDDVYHNM 237
>ref|NP_297116.1| (NC_002620) conserved hypothetical protein [Chlamydia muridarum]
sp|Q9PJT5|Y742_CHLMU Hypothetical protein TC0742
pir||A81671 conserved hypothetical protein TC0742 [imported] - Chlamydia
muridarum (strain Nigg)
gb|AAF39551.1| (AE002342) conserved hypothetical protein [Chlamydia muridarum]
Length = 238
Score = 102 bits (254), Expect = 4e-21
Identities = 71/230 (30%), Positives = 121/230 (51%), Gaps = 8/230 (3%)
Query: 12 KEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRA 71
KE+ K K+F + K + A K GG +P +NA+LR I AK QN+P +NI+ +K+A
Sbjct: 14 KERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKKA 73
Query: 72 SS-KEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFM 130
SS + N E+TYE GV II+E MTDN RT ++++ NK GA + P GS+ +
Sbjct: 74 SSADQKNYEEVTYELYGFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEP-GSVLYN 132
Query: 131 FNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELE-EVEDKIIIRGDYNSFKLLNEGF 189
F+RK K+ ++ L +ID G E+L+ E E+ ++ + + E
Sbjct: 133 FSRKGACYVPKSSIDEASLLTH-----VIDCGGEDLDSEDEEFFLVLCEPTDLASVKEAL 187
Query: 190 ESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNI 239
+ + + + + ++ ++E + L++ +E+ DDV +Y N+
Sbjct: 188 LAKGVTCSEEKMIYVPLRLVDCDEEAGKSNLALIEWLENIDDVDDVYHNM 237
>ref|NP_219970.1| (NC_000117) YebC family [Chlamydia trachomatis]
sp|O84463|Y457_CHLTR Hypothetical protein CT457
pir||D71513 hypothetical protein CT457 - Chlamydia trachomatis (serotype D,
strain UW3/Cx)
gb|AAC68057.1| (AE001319) YebC family [Chlamydia trachomatis]
Length = 238
Score = 102 bits (253), Expect = 5e-21
Identities = 77/236 (32%), Positives = 123/236 (51%), Gaps = 20/236 (8%)
Query: 12 KEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRA 71
KE+ K K+F + K + A K GG +P +NA+LR I AK QN+P +NI+ +K+A
Sbjct: 14 KERADHKKGKIFSRTIKELISAVKMGGPDPKSNARLRMIIQKAKDQNIPNENIERNLKKA 73
Query: 72 SS-KEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFM 130
SS + N E+TYE GV II+E MTDN RT ++++ NK GA + P GS+ +
Sbjct: 74 SSADQKNYEEVTYELYGFGGVGIIVEAMTDNKNRTASDMRVAVNKRGGALVEP-GSVLYN 132
Query: 131 FNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIII----RGDYNSFKLLN 186
F+RK K+ ++ L +ID G E+L+ +++ + D S K
Sbjct: 133 FSRKGACYVPKHSIDEASLLTH-----MIDCGGEDLDSDDEEFFLVLCEPTDLASVK--- 184
Query: 187 EGFESLKLPILKASLQRIATTPIELNDEQMELTEK---LLDRIEDDDDVVALYTNI 239
E+L + S +R+ P+ L D E + L++ +E+ +DV +Y N+
Sbjct: 185 ---EALLAKGVTCSEERLIYVPLRLVDCDEETGKSNLALIEWLENINDVDDVYHNM 237
>ref|NP_274653.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||G81058 conserved hypothetical protein NMB1648 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41997.1| (AE002515) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 242
Score = 101 bits (252), Expect = 6e-21
Identities = 75/236 (31%), Positives = 122/236 (50%), Gaps = 21/236 (8%)
Query: 12 KEKRWD-KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKR 70
K+ R D K K+F +L K IT+AA+ GG +P +N +LR A+ A NMPKDN+ AI +
Sbjct: 13 KKARQDAKRGKIFTRLIKEITVAARMGGGDPGSNPRLRLALEKAAENNMPKDNVQRAIDK 72
Query: 71 ASSKEGNLS-----EITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNG 125
+ GNL E+ YEG G ++++C+TDN TRT+A+++ F K G ++ +G
Sbjct: 73 GT---GNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFTK-NGGNLGTDG 128
Query: 126 SLEFMFNRKS--VFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED-KIIIRGDYNSF 182
+ F F + VFE +E + L A ++ G E++ +D I + N +
Sbjct: 129 CVAFNFVHQGYLVFEPGVDE--------DALMEAALEAGAEDVVTNDDGSIEVITAPNDW 180
Query: 183 KLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTN 238
+ E+ + + A EL+ + +KL+D +ED DDV +YT+
Sbjct: 181 AGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQDVYTS 236
>ref|NP_284609.1| (NC_003116) conserved hypothetical protein [Neisseria meningitidis
Z2491]
pir||F81817 conserved hypothetical protein NMA1902 [imported] - Neisseria
meningitidis (group A strain Z2491)
emb|CAB85123.1| (AL162757) conserved hypothetical protein [Neisseria meningitidis
Z2491]
Length = 242
Score = 101 bits (251), Expect = 8e-21
Identities = 75/236 (31%), Positives = 121/236 (50%), Gaps = 21/236 (8%)
Query: 12 KEKRWD-KMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKR 70
K+ R D K K+F +L K IT+AA+ GG +P N +LR A+ A NMPKDN+ AI +
Sbjct: 13 KKARQDAKRGKIFTRLIKEITVAARMGGGDPGANPRLRLALEKAAENNMPKDNVQRAIDK 72
Query: 71 ASSKEGNLS-----EITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNG 125
+ GNL E+ YEG G ++++C+TDN TRT+A+++ F K G ++ +G
Sbjct: 73 GT---GNLEGVEYIELRYEGYGIGGAALMVDCLTDNKTRTVADVRHAFTK-NGGNLGTDG 128
Query: 126 SLEFMFNRKS--VFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED-KIIIRGDYNSF 182
+ F F + VFE +E + L A ++ G E++ +D I + N +
Sbjct: 129 CVAFNFVHQGYLVFEPGVDE--------DALMEAALEAGAEDVVTNDDGSIEVITAPNDW 180
Query: 183 KLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTN 238
+ E+ + + A EL+ + +KL+D +ED DDV +YT+
Sbjct: 181 AGVKSALEAAGYKSVDGDVTMRAQNETELSGDDAVKMQKLIDALEDLDDVQDVYTS 236
>ref|NP_438481.1| (NC_000907) conserved hypothetical protein [Haemophilus influenzae
Rd]
sp|P44634|YEBC_HAEIN Protein HI0315
pir||G64147 hypothetical protein HI0315 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC21979.1| (U32717) conserved hypothetical protein [Haemophilus influenzae Rd]
Length = 246
Score = 100 bits (250), Expect = 1e-20
Identities = 68/238 (28%), Positives = 124/238 (51%), Gaps = 14/238 (5%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNID 65
++R+AA++ + K+F KL + + AAK GG + N +LR A+ A + NM +D I+
Sbjct: 11 KHRKAAQDAQ---RGKIFTKLIRELVTAAKIGGGDVSANPRLRAAVDKALSNNMTRDTIN 67
Query: 66 AAIKR--ASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
AI R + N+ YEG G +++EC++DN RTI+ ++ F K G ++
Sbjct: 68 RAIDRGVGGGDDTNMETKIYEGYGPGGTAVMVECLSDNANRTISQVRPSFTKC-GGNLGT 126
Query: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED-KIIIRGDYNSF 182
GS+ ++F++K + L E + + L A I+ G ++++ +D I +
Sbjct: 127 EGSVGYLFSKKGLI--LIAEADE-----DALTEAAIEAGADDIQPQDDGSFEIYTAWEDL 179
Query: 183 KLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ +G E+ + +A + I +T ++L+ E +L+D +ED DDV +Y N E
Sbjct: 180 GSVRDGIEAAGFKVQEAEVTMIPSTTVDLDIETAPKLLRLIDMLEDCDDVQNVYHNGE 237
>ref|NP_220835.1| (NC_000963) unknown [Rickettsia prowazekii]
sp|Q9ZD88|Y455_RICPR Hypothetical protein RP455
pir||E71704 hypothetical protein RP455 - Rickettsia prowazekii
emb|CAA14911.1| (AJ235271) unknown [Rickettsia prowazekii]
Length = 252
Score = 100 bits (250), Expect = 1e-20
Identities = 85/241 (35%), Positives = 128/241 (52%), Gaps = 21/241 (8%)
Query: 6 EYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSE-PDTNAKLRTAILNAKAQNMPKDNI 64
++R+ A++K K SKVF KL + I A K G S P+ N +LR A+ A++QN+PK+ I
Sbjct: 11 QHRKGAQDK---KKSKVFTKLIREIVTAVKTGASNVPENNPRLRKALNAARSQNLPKERI 67
Query: 65 DAAIKRASSKEGNLS--EITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIV 122
D AI A+ N S EI YEG A G+ II+E +TDN RT + ++S F K G +
Sbjct: 68 DKAINSANDASNNESYMEIRYEGYAPNGIAIIVEALTDNKNRTASEVRSSFTK-YGGILG 126
Query: 123 PNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKI---IIRGDY 179
GS+ ++FN V + N N ED+ A I G ++ + D I I
Sbjct: 127 ETGSVNYLFNHCGVIQYPINIASN-----EDIFEAAIQAGGNDI--ISDYITHTIYTDIE 179
Query: 180 NSFKLLNEGFESLKLPILKAS-LQRIATTPIELND-EQMELTEKLLDRIEDDDDVVALYT 237
N +K L GF + K I + S + I I ++D E+ + KL+ +E++DDV ++
Sbjct: 180 NFYKAL--GFLTDKYGIPEDSYIGWIPVNTIIIDDKEKAKKLLKLIAVLEENDDVQRVFG 237
Query: 238 N 238
N
Sbjct: 238 N 238
>ref|NP_441940.1| (NC_000911) hypothetical protein [Synechocystis sp. PCC 6803]
sp|P74514|Y989_SYNY3 Hypothetical protein slr0989
pir||S76489 hypothetical protein - Synechocystis sp. (strain PCC 6803)
dbj|BAA18618.1| (D90915) ORF_ID:slr0989~hypothetical protein [Synechocystis sp. PCC
6803]
Length = 253
Score = 100 bits (249), Expect = 1e-20
Identities = 75/248 (30%), Positives = 135/248 (54%), Gaps = 16/248 (6%)
Query: 2 GRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPK 61
GR ++ + K + + K +L++AI +AA+ G +P N +LRTAI A+A +P
Sbjct: 3 GRKWQSIKRQKARVDAQKGKTTTQLSRAIIVAARQGIPDPAGNFQLRTAIEKARAAGVPN 62
Query: 62 DNIDAAIKRASSK----EGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQ 117
D+ID AI + + E N E+ YEG GV +++E +TDN RT A+L++ F+K +
Sbjct: 63 DSIDRAIAKGAGTYEDGESNYEEMRYEGYGPGGVAVLIEALTDNRNRTAADLRAAFSK-K 121
Query: 118 GASIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDK----I 173
G ++ G + +MF++K V L E+E KL LE AL++ E E ++++ +
Sbjct: 122 GGNLGETGCVSWMFSQKGVIR-LVGELEEEKL-LE----ALLEGEGESYEWLDEEDGGGV 175
Query: 174 IIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELND-EQMELTEKLLDRIEDDDDV 232
+ N + LN+ ++ I + L+ + IE+ + +Q + +++D +E DDV
Sbjct: 176 EVFSAVNQLENLNQVLQNHGFTIAETELRWLPENTIEIAEPDQAKALMQMIDTLESLDDV 235
Query: 233 VALYTNIE 240
++ +N E
Sbjct: 236 QSVTSNFE 243
>ref|NP_346350.1| (NC_003028) conserved hypothetical protein [Streptococcus
pneumoniae TIGR4]
ref|NP_359330.1| (NC_003098) Conserved hypothetical protein [Streptococcus
pneumoniae R6]
gb|AAK75990.1| (AE007482) conserved hypothetical protein [Streptococcus pneumoniae
TIGR4]
gb|AAL00541.1| (AE008539) Conserved hypothetical protein [Streptococcus pneumoniae
R6]
Length = 238
Score = 99.4 bits (246), Expect = 3e-20
Identities = 75/245 (30%), Positives = 129/245 (52%), Gaps = 14/245 (5%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + A K + SKV+ K I +AAK G +P++N+ L+ I AK +P
Sbjct: 1 MGRKWANIVAKKTAKDGANSKVYAKFGVEIYVAAKKGDPDPESNSALKFVIDRAKQAQVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K ID AI +A + + +E YEG G ++I++ +T N RT AN+++ F K G
Sbjct: 61 KHIIDKAIDKAKGNTDETFTEGRYEGFGPNGSMLIVDTLTSNVNRTAANVRAAFGK-NGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
++ +GS+ ++F+ K V + E+ E L A +D ++++E E I + Y
Sbjct: 120 NMGASGSVSYLFDNKGV---IVFGGEDADAVFEQLLEADVD--VDDVEAQEGTITV---Y 171
Query: 180 NSFKLLNEGFESLKLPILK----ASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVAL 235
+ L++ +L+ ++ L+ I + +EL+ E +E EKL +EDD+DV +
Sbjct: 172 TAPTDLHKAIVALRESGIEEFQVTELEMIPQSEVELSGEDLETFEKLYSVLEDDEDVQKI 231
Query: 236 YTNIE 240
YTN++
Sbjct: 232 YTNVD 236
>ref|NP_268655.1| (NC_002737) conserved hypothetical protein [Streptococcus pyogenes]
[Streptococcus pyogenes M1 GAS]
ref|NP_606571.1| (NC_003485) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
gb|AAK33376.1| (AE006497) conserved hypothetical protein [Streptococcus pyogenes
M1 GAS]
gb|AAL97070.1| (AE009977) conserved hypothetical protein [Streptococcus pyogenes
MGAS8232]
Length = 238
Score = 98.6 bits (244), Expect = 5e-20
Identities = 73/244 (29%), Positives = 126/244 (50%), Gaps = 14/244 (5%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + A K + SKV+ K I +AAK G +P+ N L+ I AK +P
Sbjct: 1 MGRKWANIVAKKTAKDGATSKVYAKFGVEIYVAAKQGEPDPELNTALKFVIDRAKQAQVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
K ID AI +A + + E YEG G +II++ +T N RT AN+++ + K G
Sbjct: 61 KHVIDKAIDKAKGNTDETFVEGRYEGFGPNGSMIIVDTLTSNVNRTAANVRTAYGK-NGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDY 179
++ +GS+ ++F++K V ++ +++ E L A +D ++++E E I + Y
Sbjct: 120 NMGASGSVSYLFDKKGVIVFAGDDADSV---FEQLLEADVD--VDDVEAEEGTITV---Y 171
Query: 180 NSFKLLNEGFESLK----LPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVAL 235
+ L++G ++L+ L+ I + + L + +E EKL+D +E DDDV +
Sbjct: 172 TAPTDLHKGIQALRDNGVEEFQVTELEMIPQSEVVLEGDDLETFEKLIDALESDDDVQKV 231
Query: 236 YTNI 239
Y N+
Sbjct: 232 YHNV 235
>ref|NP_296268.1| (NC_001263) conserved hypothetical protein [Deinococcus
radiodurans]
pir||G75259 conserved hypothetical protein - Deinococcus radiodurans (strain
R1)
gb|AAF12089.1|AE002084_2 (AE002084) conserved hypothetical protein [Deinococcus radiodurans]
Length = 244
Score = 97.8 bits (242), Expect = 9e-20
Identities = 69/237 (29%), Positives = 120/237 (50%), Gaps = 16/237 (6%)
Query: 8 RRAAKEKRWDKMSKVFPKLAKAITLAAKDGGS-EPDTNAKLRTAILNAKAQNMPKDNIDA 66
++ A +K K S ++ K +AI A + GGS +P N L+ AI AK +P DNI+
Sbjct: 13 KKGANDK---KRSAMYSKHIRAIQAAVRSGGSGDPAGNLSLKNAIAAAKTDTVPADNIEN 69
Query: 67 AIKRA-SSKEG--NLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
AIKRA + EG E TYEG G I +E +TDN RT+A++++ FNK +G S+
Sbjct: 70 AIKRAVGAGEGAAEYKEQTYEGYGPGGTAIFIETLTDNVNRTVADIRAVFNK-RGGSMGN 128
Query: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFK 183
+GS+ + F +K + L+ + E + I+ G E+++E ++ + I N
Sbjct: 129 SGSVAWQFEKKGII--------LLRDASEAAQEVAIENGAEDIQESDEGLEISTAPNDLY 180
Query: 184 LLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ + + + + + T + + + L++ +E+ DDV +YTN +
Sbjct: 181 AVQDALSAAGYAVESGQITMLPTNTVAVAGDDARKLLTLVEYLEELDDVQNVYTNAD 237
>ref|NP_645448.1| (NC_003923) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
dbj|BAB94496.1| (AP004824) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus MW2]
Length = 238
Score = 95.5 bits (236), Expect = 4e-19
Identities = 67/245 (27%), Positives = 123/245 (49%), Gaps = 14/245 (5%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR + + K ++ S+++ K K I +AAK G P++N LR + AK ++P
Sbjct: 1 MGRKWNNIKEKKAQKDKNTSRIYAKFGKEIYVAAKSGEPNPESNQALRLVLERAKTYSVP 60
Query: 61 KDNIDAAIKRA-SSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
I+ AI +A + + N + YEG G ++I++ +T+N RT +++++ F K G
Sbjct: 61 NHIIEKAIDKAKGAGDENFDHLRYEGFGPSGSMLIVDALTNNVNRTASDVRAAFGK-NGG 119
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSL----EDLEFALIDYGLEELEEVEDKIII 175
++ +GS+ +MF+ + F V+ + +L D+ + D GL + D+ +
Sbjct: 120 NMGVSGSVAYMFDHVATFGIEGKSVDEILETLMEQDVDVNDVIDDNGLTIVYAEPDQFAV 179
Query: 176 RGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVAL 235
D L G E K+ A + + T IEL++ EKL+D +ED +DV +
Sbjct: 180 VQD----ALRAAGVEEFKV----AEFEMLPQTDIELSEADQVTFEKLIDALEDLEDVQNV 231
Query: 236 YTNIE 240
+ N++
Sbjct: 232 FHNVD 236
>gb|AAH05049.1|AAH05049 (BC005049) Similar to RIKEN cDNA 2310066I18 gene [Homo sapiens]
gb|AAH07744.1|AAH07744 (BC007744) Unknown (protein for MGC:13286) [Homo sapiens]
Length = 297
Score = 91.7 bits (226), Expect = 6e-18
Identities = 67/259 (25%), Positives = 124/259 (47%), Gaps = 28/259 (10%)
Query: 2 GRAFEYRRA--AKEKRWDKM-----------SKVFPKLAKAITLAAKDGGSEPDTNAKLR 48
GR + A A +W K+ S++F KL I LA K+GG P+ N+ L
Sbjct: 47 GRTLHFTAAVPAGHNKWSKVRHIKGPKDVERSRIFSKLCLNIRLAVKEGGPNPEHNSNLA 106
Query: 49 TAILNAKAQNMPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIAN 108
+ ++++MPK I+ A+K SK+ + + YEG+ G +++E ++++ + A+
Sbjct: 107 NILEVCRSKHMPKSTIETALKMEKSKD---TYLLYEGRGPGGSSLLIEALSNSSHKCQAD 163
Query: 109 LKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEE 168
++ NK G V F++K V + E ++LE I+ G E+++E
Sbjct: 164 IRHILNKNGGVMAV---GARHSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKE 220
Query: 169 VED-------KIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEK 221
ED K I D +S + + +SL L + +L+ I + ++L + +E
Sbjct: 221 TEDEEERNVFKFIC--DASSLHQVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAH 278
Query: 222 LLDRIEDDDDVVALYTNIE 240
L+ + + +DV+ +Y NIE
Sbjct: 279 LIQALSNHEDVIHVYDNIE 297
>ref|NP_565610.1| (NM_128143) expressed protein [Arabidopsis thaliana]
gb|AAC42247.2| (AC005395) expressed protein [Arabidopsis thaliana]
Length = 331
Score = 87.4 bits (215), Expect = 1e-16
Identities = 69/250 (27%), Positives = 120/250 (47%), Gaps = 20/250 (8%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR K + K +K++ ++ K + A K GG P +N L T + AK ++P
Sbjct: 84 MGRRSSKIAGRKGAQDSKKAKLYCRIGKEVVSAVKKGGPNPVSNTTLATILDKAKELDVP 143
Query: 61 KDNIDAAIKRASSK-EGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
KD ++ IKRAS K + E YE GV +++E +TD R++A ++S K G
Sbjct: 144 KDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSMVVEVLTDKINRSVAAIRSVV-KDYGG 202
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEE---VEDKIIIR 176
+ +GS+ F F R V E + + L +D G E++ E ED
Sbjct: 203 KMADSGSVMFKFKRVRVVNIKVTEADK-----DQLLIIALDAGAEDVIEPPTYEDDTDED 257
Query: 177 GDYNSFKLL--NEGFESLKLPILKASL--------QRIATTPIELNDEQMELTEKLLDRI 226
+ +K++ NE + ++ + + + + T +E++DE MEL ++L+ ++
Sbjct: 258 REERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLPLTTVEVDDEAMELNKELMQKL 317
Query: 227 EDDDDVVALY 236
+ DDV A+Y
Sbjct: 318 LELDDVDAVY 327
>sp|O82314|YB30_ARATH Hypothetical protein At2g25830
Length = 339
Score = 86.7 bits (213), Expect = 2e-16
Identities = 68/253 (26%), Positives = 122/253 (47%), Gaps = 18/253 (7%)
Query: 1 MGRAFEYRRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMP 60
MGR K + K +K++ ++ K + A K GG P +N L T + AK ++P
Sbjct: 84 MGRRSSKIAGRKGAQDSKKAKLYCRIGKEVVSAVKKGGPNPVSNTTLATILDKAKELDVP 143
Query: 61 KDNIDAAIKRASSK-EGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGA 119
KD ++ IKRAS K + E YE GV +++E +TD R++A ++S K G
Sbjct: 144 KDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSMVVEVLTDKINRSVAAIRSVV-KDYGG 202
Query: 120 SIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALID------YGLEELEEVEDKI 173
+ +GS+ F F R V E + +L + L+ D Y + E+ E+
Sbjct: 203 KMADSGSVMFKFKRVRVVNIKVTEADKDQLLIIALDAGAEDVIEPPTYEDDTDEDREESF 262
Query: 174 IIRGDYNSFKLL--NEGFESLKLPILKASL--------QRIATTPIELNDEQMELTEKLL 223
+ + +K++ NE + ++ + + + + T +E++DE MEL ++L+
Sbjct: 263 LSLYLFRYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLPLTTVEVDDEAMELNKELM 322
Query: 224 DRIEDDDDVVALY 236
++ + DDV A+Y
Sbjct: 323 QKLLELDDVDAVY 335
>ref|NP_110166.1| (NC_000912) similar to spore coat protein [Mycoplasma pneumoniae]
sp|P75306|Y332_MYCPN Hypothetical protein MG332 homolog (P01_orf235)
pir||S73689 hypothetical protein HI0315 - Mycoplasma pneumoniae (strain ATCC
29342)
gb|AAB96011.1| (AE000034) similar to spore coat protein [Mycoplasma pneumoniae]
Length = 235
Score = 86.7 bits (213), Expect = 2e-16
Identities = 69/227 (30%), Positives = 105/227 (45%), Gaps = 8/227 (3%)
Query: 14 KRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASS 73
K+ +K KLAK I A K GGS D N +L+ A+ A A + D+I I +
Sbjct: 13 KKQQSNAKQLQKLAKRIAAAVKKGGSNIDANPQLKVAVELALAHGLSADSIKRNIHGSEK 72
Query: 74 KEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNR 133
LSE YE GV II+ +TDNP R +++L Y K + PN S++ F
Sbjct: 73 DPTKLSEFCYEIFGPNGVGIIVFGLTDNPNRLLSSLNGYIAKLKAQLAKPN-SVKINFEE 131
Query: 134 KSVFECLKNEVENLKLSLEDLEFALI--DYGLEELEEVEDKIIIRGDYNSFKLLNEGFES 191
K + V++ + ++L LI + L +L E +D + D S+ L +
Sbjct: 132 KGI-----ALVKHNNFTQDELIELLISNNINLLDLNEDDDSFEVVVDSPSYFALKDLLVK 186
Query: 192 LKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTN 238
I + L+ I +ELN EQ L + L+ E+DDD+ + N
Sbjct: 187 NSFTIEASELRLIPLLTVELNAEQHTLLNRFLNACEEDDDIQTVVHN 233
>gb|AAL07079.1| (AY056230) unknown protein [Arabidopsis thaliana]
gb|AAM45134.1| (AY114086) unknown protein [Arabidopsis thaliana]
Length = 330
Score = 86.3 bits (212), Expect = 3e-16
Identities = 70/252 (27%), Positives = 125/252 (48%), Gaps = 25/252 (9%)
Query: 1 MGRAFEY--RRAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQN 58
MGR+ + R+ A++ K +K++ ++ K + A K GG P +N L T + AK +
Sbjct: 84 MGRSSKIAGRKGAQDS---KKAKLYCRIGKEVVSAVKKGGPNPVSNTTLATILDKAKELD 140
Query: 59 MPKDNIDAAIKRASSK-EGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQ 117
+PKD ++ IKRAS K + E YE GV +++E +TD R++A ++S K
Sbjct: 141 VPKDIVERNIKRASEKGQEAFIEKIYEVYGYGGVSMVVEVLTDKINRSVAAIRSVV-KDY 199
Query: 118 GASIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEE---VEDKII 174
G + +GS+ F F R V E + + L +D G E++ E ED
Sbjct: 200 GGKMADSGSVMFKFKRVRVVNIKVTEADK-----DQLLIIALDAGAEDVIEPPTYEDDTD 254
Query: 175 IRGDYNSFKLL--NEGFESLKLPILKASL--------QRIATTPIELNDEQMELTEKLLD 224
+ +K++ NE + ++ + + + + T +E++DE MEL ++L+
Sbjct: 255 EDREERYYKIVTSNENYSTILSKLRDEGVNFEPDNGSELLPLTTVEVDDEAMELNKELMQ 314
Query: 225 RIEDDDDVVALY 236
++ + DDV A+Y
Sbjct: 315 KLLELDDVDAVY 326
>ref|NP_011535.1| (NC_001139) Hypothetical ORF; Ygr021wp [Saccharomyces cerevisiae]
sp|P53212|YG1D_YEAST Hypothetical 31.7 kDa protein in VMA7-RPS25A intergenic region
pir||S64312 hypothetical protein YGR021w - yeast (Saccharomyces cerevisiae)
emb|CAA97004.1| (Z72806) ORF YGR021w [Saccharomyces cerevisiae]
Length = 290
Score = 81.3 bits (199), Expect = 9e-15
Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 37/256 (14%)
Query: 12 KEKRWDKMSKVFPKLAKAITLAAK--DGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIK 69
K K + +K+ K A I ++ K +G ++P N +L T+I A N+ K I+ AI+
Sbjct: 39 KAKNDAERNKINNKFANQIAMSVKLGNGITDPSMNIRLATSIELANKNNVSKKVIENAIR 98
Query: 70 RASS-----KEGNLSEI-TYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVP 123
+AS K+ N SE+ YEG GV I++E +TDN RTI ++S FNK G S+ P
Sbjct: 99 KASGSSASGKDSNASELCVYEGMGPGGVAIVVEALTDNKNRTIGLIRSAFNKANG-SMTP 157
Query: 124 NGSLEFMFNRKSVFECLKNEVENLKLSLED--LEFALIDYGLEELEEVEDKIIIRGDYNS 181
F F++K + ++ L ED LE L G+E++ V++
Sbjct: 158 T---LFFFDKKGYVTMVPPKM----LDTEDKVLESVLEIQGIEDIAPVQEDAEDLECDTE 210
Query: 182 FKLLNEGFESLKLP--------ILKASLQRIATTPIELN-----------DEQMELTEKL 222
+ + +E++ P +LK I I N DE +E +KL
Sbjct: 211 TETTGQTYEAVMEPADTNKVAALLKERGFHIRDLGIGYNAKPDMEVFVQGDETLEKLQKL 270
Query: 223 LDRIEDDDDVVALYTN 238
+ED D+V +LYTN
Sbjct: 271 TTALEDIDEVTSLYTN 286
>ref|NP_595550.1| (NC_003423) HYPOTHETICAL 31.7 KD PROTEIN IN VMA7-RPS31A INTERGENIC
REGION [Schizosaccharomyces pombe]
dbj|BAA21434.1| (AB004538) HYPOTHETICAL 31.7 KD PROTEIN IN VMA7-RPS31A INTERGENIC
REGION [Schizosaccharomyces pombe]
Length = 343
Score = 79.0 bits (193), Expect = 4e-14
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 21/232 (9%)
Query: 25 KLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKR----ASSKEGNLSE 80
KL++ I LA + G+ P+ N +L T + +AK +MPK I+ AI R A S+ +
Sbjct: 105 KLSQGIILAVRQEGANPELNMRLATLLESAKKISMPKSGIENAINRGLGTAGSEGSQVHF 164
Query: 81 ITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECL 140
I YE GV +I+E +TDN R +++K + + GAS+ +++F+F++K E
Sbjct: 165 IEYEAMHPSGVGLIVEAVTDNRARAASSIK-HILRNHGASL---STVKFLFSKKGKVEVN 220
Query: 141 KNEVENLKLSLEDLEFALIDYGLEEL---------EEVEDKIIIRGDYNSFKLLNEGFES 191
+ + ED+ I+ G E++ EE E + +I + +S + F S
Sbjct: 221 LPPEKRDSMKFEDVLDDAIEAGAEDIVNRPKEYIDEEDEGEFLILTEPSSLNQVAHHFRS 280
Query: 192 LKLPILKASLQRI----ATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNI 239
I + L I + D E +KL+D + +++DV+ ++ +I
Sbjct: 281 KNYEIKDSRLIHIPLEETAIDVPAKDSVREDIQKLIDDLYENEDVMFIHLSI 332
>pir||T40757 conserved hypothetical protein SPBC8D2.12c - fission yeast
(Schizosaccharomyces pombe)
Length = 265
Score = 79.0 bits (193), Expect = 4e-14
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 21/232 (9%)
Query: 25 KLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKR----ASSKEGNLSE 80
KL++ I LA + G+ P+ N +L T + +AK +MPK I+ AI R A S+ +
Sbjct: 27 KLSQGIILAVRQEGANPELNMRLATLLESAKKISMPKSGIENAINRGLGTAGSEGSQVHF 86
Query: 81 ITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECL 140
I YE GV +I+E +TDN R +++K + + GAS+ +++F+F++K E
Sbjct: 87 IEYEAMHPSGVGLIVEAVTDNRARAASSIK-HILRNHGASL---STVKFLFSKKGKVEVN 142
Query: 141 KNEVENLKLSLEDLEFALIDYGLEEL---------EEVEDKIIIRGDYNSFKLLNEGFES 191
+ + ED+ I+ G E++ EE E + +I + +S + F S
Sbjct: 143 LPPEKRDSMKFEDVLDDAIEAGAEDIVNRPKEYIDEEDEGEFLILTEPSSLNQVAHHFRS 202
Query: 192 LKLPILKASLQRI----ATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNI 239
I + L I + D E +KL+D + +++DV+ ++ +I
Sbjct: 203 KNYEIKDSRLIHIPLEETAIDVPAKDSVREDIQKLIDDLYENEDVMFIHLSI 254
>ref|NP_073001.1| (NC_000908) conserved hypothetical protein [Mycoplasma genitalium]
sp|P47574|Y332_MYCGE Hypothetical protein MG332
pir||G64236 hypothetical protein homolog MG332 - Mycoplasma genitalium
gb|AAC71556.1| (U39714) conserved hypothetical protein [Mycoplasma genitalium]
Length = 239
Score = 79.0 bits (193), Expect = 4e-14
Identities = 62/219 (28%), Positives = 103/219 (46%), Gaps = 4/219 (1%)
Query: 14 KRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASS 73
K+ +K KLAK I A K GG+ +N L+ A+ A A+ + D+I I +
Sbjct: 13 KKQQTSAKQLQKLAKRIASAVKKGGTNIQSNPHLKVAVDLALAKGLSMDSIKRNIHGSEK 72
Query: 74 KEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNR 133
+SE YE GV II+ +TDNP R +++L Y K +G PN S++ F
Sbjct: 73 DTTKISEFCYEIFGPNGVGIIVFGLTDNPNRLLSSLNGYLAKLKGQLAKPN-SVKINFQE 131
Query: 134 KSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLK 193
+ + KN LK L +L L + L +++ E+ I NS+ E +
Sbjct: 132 EGIIFVNKNNY--LKDDLIEL-LILDNINLIDVDYDEECFEISLHSNSYFHAKELLKKNN 188
Query: 194 LPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDV 232
I+ + ++ + ++L+ Q L + L+ E+DDD+
Sbjct: 189 FSIVDSEIKLVPLLTVDLDRNQQTLLSRFLNACEEDDDI 227
>ref|NP_595574.1| (NC_003423) conserved protein; possibly mitochondrial protein
synthesis; DUF28 domain [Schizosaccharomyces pombe]
emb|CAA17827.2| (AL022072) conserved protein; possibly mitochondrial protein
synthesis; DUF28 domain [Schizosaccharomyces pombe]
Length = 293
Score = 79.0 bits (193), Expect = 4e-14
Identities = 63/232 (27%), Positives = 113/232 (48%), Gaps = 21/232 (9%)
Query: 25 KLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKR----ASSKEGNLSE 80
KL++ I LA + G+ P+ N +L T + +AK +MPK I+ AI R A S+ +
Sbjct: 55 KLSQGIILAVRQEGANPELNMRLATLLESAKKISMPKSGIENAINRGLGTAGSEGSQVHF 114
Query: 81 ITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECL 140
I YE GV +I+E +TDN R +++K + + GAS+ +++F+F++K E
Sbjct: 115 IEYEAMHPSGVGLIVEAVTDNRARAASSIK-HILRNHGASL---STVKFLFSKKGKVEVN 170
Query: 141 KNEVENLKLSLEDLEFALIDYGLEEL---------EEVEDKIIIRGDYNSFKLLNEGFES 191
+ + ED+ I+ G E++ EE E + +I + +S + F S
Sbjct: 171 LPPEKRDSMKFEDVLDDAIEAGAEDIVNRPKEYIDEEDEGEFLILTEPSSLNQVAHHFRS 230
Query: 192 LKLPILKASLQRI----ATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNI 239
I + L I + D E +KL+D + +++DV+ ++ +I
Sbjct: 231 KNYEIKDSRLIHIPLEETAIDVPAKDSVREDIQKLIDDLYENEDVMFIHLSI 282
>dbj|BAA15803.1| (D90837) ORF_ID:o347#4~similar to [SwissProt Accession Number
P44634] [Escherichia coli]
Length = 159
Score = 76.6 bits (187), Expect = 2e-13
Identities = 55/161 (34%), Positives = 88/161 (54%), Gaps = 13/161 (8%)
Query: 83 YEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKN 142
YEG G +II E +T N RTIAN+++ FNK +G +I GS+ +MF+ V
Sbjct: 5 YEGFGPNGSMIIAETLTSNVNRTIANVRTIFNK-KGGNIGAAGSVSYMFDNTGVIVFKGT 63
Query: 143 EVENLKLSLEDLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILK---- 198
+ +++ E L A +D + ++ E E I+I Y L++G +LK +
Sbjct: 64 DPDHI---FEILLEAEVD--VRDVTEEEGNIVI---YTEPTDLHKGIAALKAAGITEFST 115
Query: 199 ASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNI 239
L+ IA + +EL+ E +E+ E L+D +EDDDDV +Y N+
Sbjct: 116 TELEMIAQSEVELSPEDLEIFEGLVDALEDDDDVQKVYHNV 156
>dbj|BAB26682.1| (AK010072) data source:SPTR, source key:Q9WYT7,
evidence:ISS~putative~related to CONSERVED HYPOTHETICAL
PROTEIN [Mus musculus]
Length = 220
Score = 70.5 bits (171), Expect = 2e-11
Identities = 44/152 (28%), Positives = 82/152 (53%), Gaps = 6/152 (3%)
Query: 20 SKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLS 79
S++F KL +I LA K+GG P+ N+ L + +++NMPK I++A+K +K
Sbjct: 75 SRIFSKLTLSIRLAVKEGGPNPENNSSLANILELCRSKNMPKSTIESALKTEKNKG---I 131
Query: 80 EITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFEC 139
+ YEG+ G +++E ++++ + ++K NK G ++ G+ F F++K V
Sbjct: 132 YLLYEGRGPGGSSLLIEALSNSGPKCHLDIKYILNKNGG--MMAEGARHF-FDKKGVVVV 188
Query: 140 LKNEVENLKLSLEDLEFALIDYGLEELEEVED 171
+ E ++LE I+ G E+++E ED
Sbjct: 189 GVEDREKKAVNLERALELAIEAGAEDVKEAED 220
>ref|XP_044376.2| (XM_044376) clone HQ0477 PRO0477p [Homo sapiens]
Length = 181
Score = 65.9 bits (159), Expect = 4e-10
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 15/189 (7%)
Query: 59 MPKDNIDAAIKRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQG 118
MPK I+ A+K SK+ + + YEG+ G +++E ++++ + A+++ NK G
Sbjct: 1 MPKSTIETALKMEKSKD---TYLLYEGRGPGGSSLLIEALSNSSHKCQADIRHILNKNGG 57
Query: 119 ASIVPNGSLEFMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED------- 171
V F++K V + E ++LE I+ G E+++E ED
Sbjct: 58 VMAV---GARHSFDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVF 114
Query: 172 KIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDD 231
K I D +S + + +SL L + +L+ I + ++L + +E L+ + + +D
Sbjct: 115 KFIC--DASSLHQVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHED 172
Query: 232 VVALYTNIE 240
V+ +Y NIE
Sbjct: 173 VIHVYDNIE 181
>ref|NP_497183.1| (NM_064782) Y50D7A.9.p [Caenorhabditis elegans]
gb|AAK95893.1|AC024801_9 (AC024801) Hypothetical protein Y50D7A.9 [Caenorhabditis elegans]
Length = 285
Score = 62.0 bits (149), Expect = 5e-09
Identities = 52/235 (22%), Positives = 103/235 (43%), Gaps = 7/235 (2%)
Query: 9 RAAKEKRWDKMSKVFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAI 68
+A K K SK L + + A GG + N +L +AQ +P D + +
Sbjct: 50 KAVKGKNDLIRSKATNFLLRKVRGAVSRGGFDMKLNRELADLESEFRAQGLPLDTLKNFL 109
Query: 69 KRASSKEGNLSEITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLE 128
++ K E +++ G+ +I+ T N +L+ YFNK G + +G +
Sbjct: 110 QKMKDKPE--VEYSFDIIGPSGIFLIVTAETSNKKAFENDLRKYFNKLGGFRLAADGGVR 167
Query: 129 FMFNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED----KIIIRGDYNSFKL 184
F K V + + L++E++E +++ EE+ +E+ K + D S +
Sbjct: 168 SWFEEKGVVH-VDTKKGGKILNIEEMEEIGLEFDAEEVLLIEEDSTKKFELICDAKSLQT 226
Query: 185 LNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNI 239
L G IL++ ++ PI+ + + +KL + +++D+ V ++ NI
Sbjct: 227 LENGLGKGGFSILQSEIEFRPVHPIDCPEAEEPKVQKLYEMLQEDEQVRQIFDNI 281
>gb|EAA00925.1| (AAAB01008987) ebiP8570 [Anopheles gambiae str. PEST]
Length = 241
Score = 60.5 bits (145), Expect = 2e-08
Identities = 58/226 (25%), Positives = 96/226 (41%), Gaps = 15/226 (6%)
Query: 22 VFPKLAKAITLAAKDGGSEPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSEI 81
+F KLA+ I LA + GG P N LR AI A +NMP I +K+ +S+ L +
Sbjct: 24 LFIKLARQIRLAVQAGGPNPAVNNVLRAAIDEALKRNMPNATIQGILKKCTSQSVELKKY 83
Query: 82 TYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEF----MFNRKSVF 137
T E KA V +I TD + ++ + K N +L F F+ +
Sbjct: 84 TLEIKALDQVNVICVLYTDRFAQLKMDMATILRK--------NFALFFDTMHAFDERGFV 135
Query: 138 ECLKNEVENLKLSLEDLEFALIDYGLEELEEVEDK---IIIRGDYNSFKLLNEGFESLKL 194
E + L I+ G E++E +++ I D + + E L
Sbjct: 136 EAIAPADVKSDDLLSVCTDHAIETGAEDIEVMDENSRLIRFLCDPRDLDKVKKELEKLNY 195
Query: 195 PILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ + + I+LN + ME EKL ++++ + V +Y N+E
Sbjct: 196 SVEHSEHAFFPKSTIKLNPDAMEAYEKLKEKLKAMEGVEDIYDNVE 241
>ref|NP_371193.1| (NC_002758) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
ref|NP_373879.1| (NC_002745) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB41857.1| (AP003131) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus N315]
dbj|BAB56831.1| (AP003360) conserved hypothetical protein [Staphylococcus aureus
subsp. aureus Mu50]
Length = 146
Score = 52.4 bits (124), Expect = 4e-06
Identities = 39/153 (25%), Positives = 77/153 (49%), Gaps = 13/153 (8%)
Query: 92 LIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECLKNEVENLKLSL 151
++I++ +T+N RT +++++ F K G ++ +GS+ +MF+ + F V+ + +L
Sbjct: 1 MLIVDALTNNVNRTASDVRAAFGKN-GGNMGVSGSVAYMFDHVATFGIEGKSVDEILETL 59
Query: 152 E----DLEFALIDYGLEELEEVEDKIIIRGDYNSFKLLNEGFESLKLPILKASLQRIATT 207
D+ + D GL + D+ + D L G E K+ A + + T
Sbjct: 60 MEQDVDVNDVIDDNGLTIVYAEPDQFAVVQD----ALRAAGVEEFKV----AEFEMLPQT 111
Query: 208 PIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
IEL++ EKL+D +ED +DV ++ N++
Sbjct: 112 DIELSEADQVTFEKLIDALEDLEDVQNVFHNVD 144
>ref|NP_609366.1| (NM_135522) CG4957 gene product [Drosophila melanogaster]
gb|AAL39389.1| (AY069244) GM01936p [Drosophila melanogaster]
Length = 246
Score = 43.9 bits (102), Expect = 0.002
Identities = 49/227 (21%), Positives = 96/227 (41%), Gaps = 14/227 (6%)
Query: 22 VFPKLAKAITLAAKDGGS-EPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSE 80
+F K+++ I +A ++G S +P N+ LRT I A QNMP I + + + + L +
Sbjct: 24 LFAKISRQIRMAIQEGNSADPAINSLLRTEIERALKQNMPSGTIQNTLNKFKASKVQLKK 83
Query: 81 ITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECL 140
+ K V +I TDN + + K G + E ++ ++
Sbjct: 84 YRLDIKYKRNVYLICIFYTDNFSGVKMDATPMIKKAGGEFMDVGSLFEDFGLIETRYDTA 143
Query: 141 KNEVENLKLSLED-LEFALIDYGLEELEEVEDKIIIRGDYN------SFKLLNEGFESLK 193
K + E+ SLED I+ G EE+E V++ + G N L+ E
Sbjct: 144 KLQNES---SLEDKATNDAIELGAEEIEVVDN---VDGSVNFLCSPVVLTSLSRNLEKAG 197
Query: 194 LPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ + ++L+ E+ + + ++++ + + +Y N+E
Sbjct: 198 YTVENSEHIFSPMNVVQLSPEEQKTYDIFVEKLRNLPGLEDIYDNVE 244
>gb|AAF52894.1| (AE003628) CG4957 gene product [Drosophila melanogaster]
Length = 264
Score = 43.5 bits (101), Expect = 0.002
Identities = 40/152 (26%), Positives = 69/152 (45%), Gaps = 5/152 (3%)
Query: 22 VFPKLAKAITLAAKDGGS-EPDTNAKLRTAILNAKAQNMPKDNIDAAIKRASSKEGNLSE 80
+F K+++ I +A ++G S +P N+ LRT I A QNMP I + + + + L +
Sbjct: 24 LFAKISRQIRMAIQEGNSADPAINSLLRTEIERALKQNMPSGTIQNTLNKFKASKVQLKK 83
Query: 81 ITYEGKANFGVLIIMECMTDNPTRTIANLKSYFNKTQGASIVPNGSLEFMFNRKSVFECL 140
+ K V +I TDN + + K G + E ++ ++
Sbjct: 84 YRLDIKYKRNVYLICIFYTDNFSGVKMDATPMIKKAGGEFMDVGSLFEDFGLIETRYDTA 143
Query: 141 KNEVENLKLSLED-LEFALIDYGLEELEEVED 171
K + E+ SLED I+ G EE+E V++
Sbjct: 144 KLQNES---SLEDKATNDAIELGAEEIEVVDN 172
>ref|NP_057444.1| (NM_016360) clone HQ0477 PRO0477p [Homo sapiens]
gb|AAF24044.1|AF090929_2 (AF090929) PRO0477p [Homo sapiens]
Length = 130
Score = 41.6 bits (96), Expect = 0.007
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 131 FNRKSVFECLKNEVENLKLSLEDLEFALIDYGLEELEEVED-------KIIIRGDYNSFK 183
F++K V + E ++LE I+ G E+++E ED K I D +S
Sbjct: 16 FDKKGVIVVEVEDREKKAVNLERALEMAIEAGAEDVKETEDEEERNVFKFIC--DASSLH 73
Query: 184 LLNEGFESLKLPILKASLQRIATTPIELNDEQMELTEKLLDRIEDDDDVVALYTNIE 240
+ + +SL L + +L+ I + ++L + +E L+ + + +DV+ +Y NIE
Sbjct: 74 QVRKKLDSLGLCSVSCALEFIPNSKVQLAEPDLEQAAHLIQALSNHEDVIHVYDNIE 130
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.314 0.133 0.360
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,256,553
Number of Sequences: 1026957
Number of extensions: 5460715
Number of successful extensions: 20275
Number of sequences better than 1.0e-02: 87
Number of HSP's better than 0.0 without gapping: 75
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 20024
Number of HSP's gapped (non-prelim): 88
length of query: 240
length of database: 324,149,939
effective HSP length: 118
effective length of query: 122
effective length of database: 202,969,013
effective search space: 24762219586
effective search space used: 24762219586
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 95 (41.2 bits)