BLASTP 2.2.1 [Apr-13-2001]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|15644863|ref|NP_207033.1| conserved hypothetical
secreted protein [Helicobacter pylori 26695]
(355 letters)
Database: /home/scwang/download_20020708_db/nr
1,026,957 sequences; 324,149,939 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_207033.1| (NC_000915) conserved hypothetical secrete... 746 0.0
ref|NP_222941.1| (NC_000921) putative [Helicobacter pylori ... 707 0.0
gb|AAM66156.1|AF326634_1 (AF326634) JHP1437-like protein [H... 185 8e-46
ref|NP_223741.1| (NC_000921) putative [Helicobacter pylori ... 182 7e-45
ref|NP_207889.1| (NC_000915) conserved hypothetical secrete... 180 2e-44
gb|AAM66155.1|AF326633_1 (AF326633) JHP1437-like protein [H... 174 1e-42
gb|AAM66150.1|AF326629_1 (AF326629) JHP1437-like protein [H... 174 2e-42
gb|AAM66149.1|AF326628_1 (AF326628) JHP1437-like protein [H... 169 3e-41
ref|NP_222869.1| (NC_000921) putative [Helicobacter pylori ... 159 6e-38
ref|NP_206959.1| (NC_000915) conserved hypothetical secrete... 156 3e-37
gb|AAL47062.1|AF326614_1 (AF326614) JHP318-like protein [He... 155 7e-37
gb|AAB63298.1| (AF008565) Orf2 [Helicobacter pylori] 153 3e-36
gb|AAC24210.1| (AF053708) cysteine-rich protein; HcpA [Heli... 153 3e-36
ref|NP_207009.1| (NC_000915) conserved hypothetical secrete... 150 3e-35
ref|NP_223037.1| (NC_000921) putative [Helicobacter pylori ... 148 8e-35
ref|NP_222918.1| (NC_000921) putative [Helicobacter pylori ... 147 2e-34
gb|AAL47059.1|AF326610_1 (AF326610) JHP318-like protein [He... 142 6e-33
ref|NP_223289.1| (NC_000921) putative [Helicobacter pylori ... 129 7e-29
gb|AAM66148.1|AF326627_1 (AF326627) JHP1437-like protein [H... 124 2e-27
gb|AAM66151.1|AF326630_1 (AF326630) JHP1437-like protein [H... 121 1e-26
ref|NP_586349.1| (NC_003237) similarity to SKT5 PROTEIN [En... 121 1e-26
gb|AAL47058.1|AF326608_1 (AF326608) JHP318-like protein [He... 121 1e-26
ref|NP_223762.1| (NC_000921) putative [Helicobacter pylori ... 118 1e-25
ref|NP_224155.1| (NC_000921) putative [Helicobacter pylori ... 116 3e-25
gb|AAB47276.1| (U86608) 29 kDa protein [Helicobacter pylori] 113 3e-24
ref|NP_207908.1| (NC_000915) conserved hypothetical secrete... 110 2e-23
ref|NP_281603.1| (NC_002163) putative periplasmic protein [... 109 5e-23
gb|EAA06387.1| (AAAB01008846) agCP13101 [Anopheles gambiae ... 104 2e-21
gb|AAD05210.1| (AF063095) SELlL [Mus musculus] >gi|20073079... 99 7e-20
ref|XP_127076.1| (XM_127076) similar to Sel-1 homolog precu... 99 7e-20
ref|NP_005056.3| (NM_005065) sel-1 suppressor of lin-12-lik... 99 7e-20
gb|AAF29413.1|AF052059_1 (AF052059) SEL1L [Homo sapiens] >g... 99 7e-20
gb|AAL47060.1|AF326611_1 (AF326611) JHP318-like protein [He... 97 2e-19
dbj|BAB12403.1| (AB048195) SEL1L [Mesocricetus auratus] 97 2e-19
ref|NP_207422.1| (NC_000915) hypothetical protein [Helicoba... 96 8e-19
ref|NP_459646.1| (NC_003197) putative TPR repeat protein [S... 94 2e-18
ref|NP_460716.1| (NC_003197) putative TPR repeat protein [S... 93 5e-18
ref|NP_651179.1| (NM_142922) BcDNA:LD23587 gene product [Dr... 92 7e-18
ref|NP_455743.1| (NC_003198) putative secreted protein [Sal... 92 1e-17
ref|NP_207134.1| (NC_000915) hypothetical protein [Helicoba... 92 1e-17
ref|XP_046437.2| (XM_046437) similar to dJ842G6.2 (novel pr... 87 4e-16
emb|CAB65792.2| (AL109657) dJ842G6.2 (novel protein imilar ... 86 5e-16
ref|NP_415177.1| (NC_000913) orf, hypothetical protein [Esc... 86 8e-16
sp|P77234|YBEQ_ECOLI Hypothetical protein ybeQ 86 8e-16
ref|NP_009492.1| (NC_001134) protoplast regeneration and ki... 85 1e-15
gb|AAC60564.1| (S65415) protoplast regeneration and killer ... 84 2e-15
prf||1920224A skt5 gene [Saccharomyces cerevisiae] >gi|7422... 84 2e-15
gb|AAF45339.1| (AE003066) CG13865 gene product [Drosophila ... 83 5e-15
dbj|BAA19847.1| (AB003310) chitin synthase regulatory facto... 83 5e-15
gb|AAD41587.1|AF057704_3 (AF057704) enhanced entry protein ... 82 1e-14
gb|AAK64159.1| (AY039982) unknown protein [Arabidopsis thal... 81 2e-14
ref|NP_506144.1| (NM_073743) Yeast hypothetical gene L8167.... 81 2e-14
gb|AAC47112.1| (U50828) sel-1 gene product [Caenorhabditis ... 81 2e-14
ref|NP_564049.1| (NM_101684) expressed protein [Arabidopsis... 81 2e-14
ref|NP_455035.1| (NC_003198) conserved hypothetical protein... 79 8e-14
gb|AAF01236.1|AF185288_1 (AF185288) immunoreactive protein ... 78 1e-13
pir||T46587 hypothetical protein [imported] - Vogesella ind... 77 2e-13
ref|NP_420846.1| (NC_002696) conserved hypothetical protein... 76 5e-13
ref|XP_131544.1| (XM_131544) RIKEN cDNA 2010305A19 [Mus mus... 74 2e-12
gb|AAH15313.1|AAH15313 (BC015313) hypothetical protein FLJ1... 74 2e-12
ref|NP_075565.1| (NM_023077) hypothetical protein FLJ12439 ... 74 2e-12
ref|NP_496487.1| (NM_064086) ZK20.4.p [Caenorhabditis elega... 74 3e-12
gb|AAL47063.1|AF326616_1 (AF326616) JHP1024-like protein [H... 74 3e-12
ref|NP_286370.1| (NC_002655) ybeQ gene product [Escherichia... 73 4e-12
ref|NP_592847.1| (NC_003424) similar to yeast protoplast re... 73 6e-12
ref|NP_246550.1| (NC_002663) unknown [Pasteurella multocida... 72 7e-12
dbj|BAB25716.1| (AK008518) data source:SPTR, source key:Q9H... 70 4e-11
ref|NP_177498.1| (NM_106015) hypothetical protein [Arabidop... 70 5e-11
gb|EAA00460.1| (AAAB01008986) agCP9334 [Anopheles gambiae s... 68 1e-10
gb|AAH11926.1|AAH11926 (BC011926) Similar to KIAA0141 gene ... 67 4e-10
ref|NP_055588.1| (NM_014773) KIAA0141 gene product [Homo sa... 67 4e-10
gb|AAH07855.1|AAH07855 (BC007855) KIAA0141 gene product [Ho... 67 4e-10
ref|NP_459434.1| (NC_003197) putative TPR repeat protein [S... 66 5e-10
ref|NP_273467.1| (NC_003112) conserved hypothetical protein... 65 1e-09
gb|AAC37164.1| (L05770) putative regulatory protein PobS [A... 64 3e-09
ref|NP_283034.1| (NC_003116) hypothetical protein NMA0184 [... 61 2e-08
ref|NP_284256.1| (NC_003116) hypothetical protein [Neisseri... 61 2e-08
ref|NP_585979.1| (NC_003234) similarity to HYPOTHETICAL PRO... 60 4e-08
dbj|BAB22100.1| (AK002437) data source:SPTR, source key:Q14... 60 4e-08
ref|NP_539245.1| (NC_003317) TETRATRICOPEPTIDE REPEAT FAMIL... 59 6e-08
ref|NP_460954.1| (NC_003197) putative TPR repeat protein [S... 58 1e-07
ref|NP_010078.1| (NC_001136) Hypothetical ORF; Ydl203cp [Sa... 58 2e-07
ref|XP_134130.1| (XM_134130) similar to Ank repeat containi... 58 2e-07
ref|NP_080554.1| (NM_026278) RIKEN cDNA 2310006J04 [Mus mus... 58 2e-07
ref|NP_661851.1| (NC_002932) conserved hypothetical protein... 58 2e-07
ref|NP_274346.1| (NC_003112) conserved hypothetical protein... 57 2e-07
ref|NP_103302.1| (NC_002678) unknown protein [Mesorhizobium... 57 2e-07
ref|NP_102363.1| (NC_002678) hypothetical protein [Mesorhiz... 57 3e-07
ref|NP_596825.1| (NC_003423) hypothetical protein [Schizosa... 57 4e-07
ref|NP_405544.1| (NC_003143) putative exported protein [Yer... 56 6e-07
ref|XP_003620.2| (XM_003620) similar to hypothetical protei... 56 6e-07
dbj|BAA92563.1| (AB037746) KIAA1325 protein [Homo sapiens] 56 6e-07
ref|NP_060879.1| (NM_018409) hypothetical protein DKFZp761O... 56 6e-07
gb|AAH30908.1| (BC030908) Unknown (protein for IMAGE:450426... 54 2e-06
ref|NP_104918.1| (NC_002678) hypothetical protein [Mesorhiz... 54 2e-06
ref|NP_585810.1| (NC_003233) putative SKT5-like protein [En... 54 3e-06
ref|NP_439767.1| (NC_000907) H. influenzae predicted coding... 54 4e-06
gb|AAG30966.1|AC012396_2 (AC012396) hypothetical protein, 3... 54 4e-06
ref|NP_588282.1| (NC_003421) hypothetical protein [Schizosa... 53 6e-06
ref|XP_130572.1| (XM_130572) similar to dJ842G6.2 (novel pr... 52 8e-06
ref|NP_245305.1| (NC_002663) unknown [Pasteurella multocida... 52 8e-06
ref|NP_643252.1| (NC_003919) conserved hypothetical protein... 52 1e-05
ref|NP_435252.1| (NC_003037) hypothetical protein [Sinorhiz... 51 2e-05
ref|NP_459433.1| (NC_003197) putative periplasmic protein [... 51 2e-05
gb|AAK54860.1| (AF304855) SEL1L [Rattus norvegicus] 50 4e-05
ref|NP_249051.1| (NC_002516) hypothetical protein [Pseudomo... 50 5e-05
ref|NP_350039.1| (NC_003030) TPR-repeat-containing protein ... 49 7e-05
ref|NP_386885.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhiz... 49 1e-04
ref|NP_106249.1| (NC_002678) unknown protein [Mesorhizobium... 48 1e-04
ref|NP_521481.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN... 47 3e-04
ref|NP_253206.1| (NC_002516) hypothetical protein [Pseudomo... 47 3e-04
gb|AAH26655.1| (BC026655) Similar to KIAA0746 protein [Mus ... 47 3e-04
ref|NP_595669.1| (NC_003423) hypothetical protein [Schizosa... 47 3e-04
ref|NP_541444.1| (NC_003318) TETRATRICOPEPTIDE REPEAT FAMIL... 47 3e-04
ref|NP_662672.1| (NC_002932) conserved hypothetical protein... 45 0.001
ref|NP_602587.1| (NC_003454) Tetratricopeptide repeat famil... 45 0.001
ref|NP_472966.1| (NC_000910) predicted membrane associated ... 45 0.001
gb|EAA03532.1| (AAAB01008794) agCP14246 [Anopheles gambiae ... 45 0.002
ref|NP_473246.1| (NC_000521) predicted using hexExon; MAL3P... 45 0.002
ref|XP_132104.1| (XM_132104) similar to Sel-1 homolog precu... 45 0.002
ref|NP_223186.1| (NC_000921) putative [Helicobacter pylori ... 45 0.002
ref|NP_531202.1| (NC_003304) conserved hypothetical protein... 44 0.002
ref|NP_207316.1| (NC_000915) conserved hypothetical protein... 44 0.002
gb|AAK18804.1|AF305612_1 (AF305612) LMP1 [Borrelia burgdorf... 44 0.002
ref|NP_353527.1| (NC_003062) AGR_C_883p [Agrobacterium tume... 44 0.002
ref|NP_485860.1| (NC_003272) hypothetical protein [Nostoc s... 44 0.002
ref|NP_356872.1| (NC_003063) AGR_L_2168p [Agrobacterium tum... 44 0.003
ref|NP_455031.1| (NC_003198) probable secreted protein [Sal... 44 0.003
ref|NP_534243.1| (NC_003305) enhanced entry protein [Agroba... 44 0.003
gb|EAA08334.1| (AAAB01008879) agCP2877 [Anopheles gambiae s... 44 0.003
ref|NP_629352.1| (NC_003888) hypothetical protein SC7E4.02 ... 44 0.004
ref|NP_638122.1| (NC_003902) conserved hypothetical protein... 43 0.005
gb|AAH09945.1|AAH09945 (BC009945) Unknown (protein for IMAG... 43 0.005
ref|XP_045277.1| (XM_045277) KIAA0746 protein [Homo sapiens] 43 0.005
dbj|BAA34466.1| (AB018289) KIAA0746 protein [Homo sapiens] 43 0.005
ref|NP_011022.1| (NC_001137) sporulation-specific homolog o... 43 0.006
gb|AAL47061.1|AF326613_1 (AF326613) JHP318-like protein [He... 43 0.006
gb|AAL83953.1|AF354056_1 (AF354056) temperature-induced pro... 43 0.006
ref|NP_290711.1| (NC_002655) orf, hypothetical protein [Esc... 43 0.006
>ref|NP_207033.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||C64549 conserved hypothetical secreted protein HP0235 - Helicobacter
pylori (strain 26695)
gb|AAD07303.1| (AE000543) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 355
Score = 746 bits (1925), Expect = 0.0
Identities = 355/355 (100%), Positives = 355/355 (100%)
Query: 1 MGVKFLKILVCGLFFWSLNAHLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSE 60
MGVKFLKILVCGLFFWSLNAHLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSE
Sbjct: 1 MGVKFLKILVCGLFFWSLNAHLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSE 60
Query: 61 GCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAID 120
GCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAID
Sbjct: 61 GCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAID 120
Query: 121 AYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFL 180
AYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFL
Sbjct: 121 AYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFL 180
Query: 181 EVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSG 240
EVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSG
Sbjct: 181 EVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSG 240
Query: 241 GCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALD 300
GCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALD
Sbjct: 241 GCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALD 300
Query: 301 NYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
NYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACENLTKLRGY
Sbjct: 301 NYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
>ref|NP_222941.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71958 hypothetical protein jhp0220 - Helicobacter pylori (strain J99)
gb|AAD05807.1| (AE001460) putative [Helicobacter pylori J99]
Length = 355
Score = 707 bits (1826), Expect = 0.0
Identities = 336/355 (94%), Positives = 343/355 (95%)
Query: 1 MGVKFLKILVCGLFFWSLNAHLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSE 60
M +K LKILV GLFF SLNAHLWGKQDNSFLG+ E+AYKSGNYSKA SYFKKACNDGVSE
Sbjct: 1 MNIKILKILVGGLFFLSLNAHLWGKQDNSFLGIGERAYKSGNYSKAASYFKKACNDGVSE 60
Query: 61 GCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAID 120
GCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGT QNYQEAID
Sbjct: 61 GCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTAQNYQEAID 120
Query: 121 AYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFL 180
AYAKACVLKHPESCYNLGIIYDRKIKGNA QAVTYYQKSCNFDMAKGCY+LG AYEKGFL
Sbjct: 121 AYAKACVLKHPESCYNLGIIYDRKIKGNAAQAVTYYQKSCNFDMAKGCYILGTAYEKGFL 180
Query: 181 EVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSG 240
EVKQSNHKAVIYYLKACRL++GQACRALGSLFENGDAGLDEDFEVAFDYLQKAC LNNSG
Sbjct: 181 EVKQSNHKAVIYYLKACRLNEGQACRALGSLFENGDAGLDEDFEVAFDYLQKACALNNSG 240
Query: 241 GCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALD 300
GCASLGSMYMLGRYVKKDPQKAFN+FKQACDMGSAVSCSRMGFMYSQGD V KDLRKALD
Sbjct: 241 GCASLGSMYMLGRYVKKDPQKAFNYFKQACDMGSAVSCSRMGFMYSQGDTVSKDLRKALD 300
Query: 301 NYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
NYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACENLTKLRGY
Sbjct: 301 NYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
>gb|AAM66156.1|AF326634_1 (AF326634) JHP1437-like protein [Helicobacter pylori]
Length = 327
Score = 185 bits (469), Expect = 8e-46
Identities = 97/281 (34%), Positives = 156/281 (54%), Gaps = 13/281 (4%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGL---GTTQNYQEAID--AYAKACVLKHPE 132
D+ +A EY++ AC+ D +GC L Y + + ++ ++AI+ A AKAC E
Sbjct: 46 DFTRAKEYFEKACELHDADGCIILRETYSKVILKGSAKESIEKAIEHIATAKACKSNDAE 105
Query: 133 SCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIY 192
C +L Y + A+ YY KSC + +GC +L + ++ + + K + Y
Sbjct: 106 KCKDLAEFYFNA--NDLKNALEYYSKSCKLNNVEGC-MLSATFYNDMIKGLKKDKKDLEY 162
Query: 193 YLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLG 252
Y KAC L+ G C LG ++ NG+ G+ ++F+ AF Y KAC LNN GC+ LG Y G
Sbjct: 163 YSKACELNYGDGCAILGDIYHNGE-GVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFFG 221
Query: 253 RYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEV 312
V +D +KAF ++ +AC++ A++C+ +G Y G+ V KDL+KA + + C++ D
Sbjct: 222 ESVTQDLKKAFGYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAK 281
Query: 313 GCFALAGMYYNMK----DKENAIMIYDKGCKLGMKQACENL 349
GC+ALA Y K ++ ++K CKLG+K+AC+ L
Sbjct: 282 GCYALAAFYNEGKGVARGEKQMTENFEKSCKLGLKEACDFL 322
Score = 154 bits (388), Expect = 2e-36
Identities = 92/292 (31%), Positives = 148/292 (50%), Gaps = 15/292 (5%)
Query: 30 FLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYEN---GQGTRIDYKKALEYY 86
FLG+ Y ++++A YF+KAC ++GC L Y + +KA+E+
Sbjct: 36 FLGIT--IYTDKDFTRAKEYFEKACELHDADGCIILRETYSKVILKGSAKESIEKAIEHI 93
Query: 87 KT--ACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRK 144
T AC+++D E C L Y + + A++ Y+K+C L + E C Y+
Sbjct: 94 ATAKACKSNDAEKCKDLAEFY----FNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDM 149
Query: 145 IKG--NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDG 202
IKG + + YY K+C + GC +LG Y G V Q+ KA YY KAC L++G
Sbjct: 150 IKGLKKDKKDLEYYSKACELNYGDGCAILGDIYHNG-EGVTQNFKKAFKYYSKACELNNG 208
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKA 262
+ C LG + G++ + +D + AF Y KAC LN + C +G Y G V KD +KA
Sbjct: 209 EGCSKLGGDYFFGES-VTQDLKKAFGYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKA 267
Query: 263 FNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGC 314
F + +AC++ A C + Y++G V + ++ +N+E+ C +G + C
Sbjct: 268 FEYSAKACELNDAKGCYALAAFYNEGKGVARGEKQMTENFEKSCKLGLKEAC 319
Score = 60.8 bits (146), Expect = 2e-08
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 220 DEDFEVAFDYLQKACGLNNSGGCASLGSMY---MLGRYVKKDPQKAFNFF--KQACDMGS 274
D+DF A +Y +KAC L+++ GC L Y +L K+ +KA +AC
Sbjct: 44 DKDFTRAKEYFEKACELHDADGCIILRETYSKVILKGSAKESIEKAIEHIATAKACKSND 103
Query: 275 AVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNM-----KDKEN 329
A C + Y + DL+ AL+ Y + C + + GC A Y +M KDK++
Sbjct: 104 AEKCKDLAEFYFNAN----DLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKD 159
Query: 330 AIMIYDKGCKLGMKQAC 346
+ Y K C+L C
Sbjct: 160 -LEYYSKACELNYGDGC 175
>ref|NP_223741.1| (NC_000921) putative [Helicobacter pylori J99]
pir||C71859 hypothetical protein jhp1024 - Helicobacter pylori (strain J99)
gb|AAD06595.1| (AE001530) putative [Helicobacter pylori J99]
Length = 290
Score = 182 bits (461), Expect = 7e-45
Identities = 100/274 (36%), Positives = 152/274 (54%), Gaps = 19/274 (6%)
Query: 97 GCFGLGGLYDE-------GLGTT----QNYQEAIDAYAKACVLKHPESCYNLGIIY--DR 143
G LGGL E GLG Q++ +A + KAC LK C+NLG++Y
Sbjct: 16 GALCLGGLMAEQDPKELVGLGAKSYKEQDFTQAKKYFEKACDLKENSGCFNLGVLYYQGH 75
Query: 144 KIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQ 203
++ N +A ++Y K+C+ + + GC++LG Y G V Q+ +KA+ YY KAC L +
Sbjct: 76 GVEKNLKKAASFYSKACDLNYSNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAE 134
Query: 204 ACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAF 263
C +LG ++ +G + DF+ A +Y KAC LN+ GC LGS+Y GR KD +KA
Sbjct: 135 GCASLGGIYHDGKV-VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKAL 193
Query: 264 NFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN 323
+ +ACD+ + C G MY G+ K+ ++AL Y + C++ + GCF L M YN
Sbjct: 194 ASYDKACDLKDSPGCFNAGNMYHHGEGAAKNFKEALARYSKACELENGGGCFNLGAMQYN 253
Query: 324 ----MKDKENAIMIYDKGCKLGMKQACENLTKLR 353
++++ AI + KGCKLG K AC+ L +L+
Sbjct: 254 GEGATRNEKQAIENFKKGCKLGAKGACDILKQLK 287
Score = 172 bits (436), Expect = 5e-42
Identities = 93/260 (35%), Positives = 144/260 (54%), Gaps = 5/260 (1%)
Query: 22 LWGKQD-NSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYK 80
L +QD +G+ K+YK ++++A YF+KAC+ + GC LG++Y G G + K
Sbjct: 23 LMAEQDPKELVGLGAKSYKEQDFTQAKKYFEKACDLKENSGCFNLGVLYYQGHGVEKNLK 82
Query: 81 KALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII 140
KA +Y AC + GC LG LY G G +QN +A+ Y+KAC LK+ E C +LG I
Sbjct: 83 KAASFYSKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
Query: 141 Y--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACR 198
Y + + + +AV Y+ K+C+ + GC +LG Y+ G K KA+ Y KAC
Sbjct: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLK-KALASYDKACD 201
Query: 199 LDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKD 258
L D C G+++ +G+ G ++F+ A KAC L N GGC +LG+M G ++
Sbjct: 202 LKDSPGCFNAGNMYHHGE-GAAKNFKEALARYSKACELENGGGCFNLGAMQYNGEGATRN 260
Query: 259 PQKAFNFFKQACDMGSAVSC 278
++A FK+ C +G+ +C
Sbjct: 261 EKQAIENFKKGCKLGAKGAC 280
>ref|NP_207889.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||B64657 conserved hypothetical secreted protein HP1098 - Helicobacter
pylori (strain 26695)
gb|AAD08141.1| (AE000616) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 290
Score = 180 bits (457), Expect = 2e-44
Identities = 99/274 (36%), Positives = 153/274 (55%), Gaps = 19/274 (6%)
Query: 97 GCFGLGGLYDE-------GLGTT----QNYQEAIDAYAKACVLKHPESCYNLGIIY--DR 143
G LGGL E GLG +++ +A + KAC LK C+NLG++Y +
Sbjct: 16 GALCLGGLMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQ 75
Query: 144 KIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQ 203
++ N +A ++Y K+C+ + + GC++LG Y G V Q+ +KA+ YY KAC L +
Sbjct: 76 GVEKNLKKAASFYAKACDLNYSNGCHLLGNLYYSG-QGVSQNTNKALQYYSKACDLKYAE 134
Query: 204 ACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAF 263
C +LG ++ +G + DF+ A +Y KAC LN+ GC LGS+Y GR KD +KA
Sbjct: 135 GCASLGGIYHDGKV-VTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLKKAL 193
Query: 264 NFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN 323
+ +ACD+ + C G MY G+ K+ ++AL Y + C++ + GCF L M YN
Sbjct: 194 ASYDKACDLKDSPGCFNAGNMYHHGEGATKNFKEALARYSKACELENGGGCFNLGAMQYN 253
Query: 324 ----MKDKENAIMIYDKGCKLGMKQACENLTKLR 353
++++ AI + KGCKLG K AC+ L +L+
Sbjct: 254 GEGVTRNEKQAIENFKKGCKLGAKGACDILKQLK 287
Score = 176 bits (445), Expect = 5e-43
Identities = 95/260 (36%), Positives = 146/260 (55%), Gaps = 5/260 (1%)
Query: 22 LWGKQD-NSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYK 80
L +QD +G+ K+YK ++++A YF+KAC+ + GC LG++Y GQG + K
Sbjct: 23 LMAEQDPKELVGLGAKSYKEKDFTQAKKYFEKACDLKENSGCFNLGVLYYQGQGVEKNLK 82
Query: 81 KALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII 140
KA +Y AC + GC LG LY G G +QN +A+ Y+KAC LK+ E C +LG I
Sbjct: 83 KAASFYAKACDLNYSNGCHLLGNLYYSGQGVSQNTNKALQYYSKACDLKYAEGCASLGGI 142
Query: 141 Y--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACR 198
Y + + + +AV Y+ K+C+ + GC +LG Y+ G K KA+ Y KAC
Sbjct: 143 YHDGKVVTRDFKKAVEYFTKACDLNDGDGCTILGSLYDAGRGTPKDLK-KALASYDKACD 201
Query: 199 LDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKD 258
L D C G+++ +G+ G ++F+ A KAC L N GGC +LG+M G V ++
Sbjct: 202 LKDSPGCFNAGNMYHHGE-GATKNFKEALARYSKACELENGGGCFNLGAMQYNGEGVTRN 260
Query: 259 PQKAFNFFKQACDMGSAVSC 278
++A FK+ C +G+ +C
Sbjct: 261 EKQAIENFKKGCKLGAKGAC 280
>gb|AAM66155.1|AF326633_1 (AF326633) JHP1437-like protein [Helicobacter pylori]
Length = 336
Score = 174 bits (441), Expect = 1e-42
Identities = 92/276 (33%), Positives = 151/276 (54%), Gaps = 13/276 (4%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGL---GTTQNYQEAID--AYAKACVLKHPE 132
D+ +A EY++ AC+ D +GC L Y + + ++ ++AI+ A AKAC E
Sbjct: 46 DFTRAKEYFEKACELHDADGCIILRETYSKVILKGSAKESIEKAIEHIATAKACKSNDAE 105
Query: 133 SCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIY 192
C +L Y + A+ YY KSC + +GC +L + ++ + + K + Y
Sbjct: 106 KCKDLAEFYFNA--NDLKNALEYYSKSCKLNNVEGC-MLSATFYNDMIKGLKKDKKDLEY 162
Query: 193 YLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLG 252
Y KAC L+ G C LG ++ NG+ G+ ++F+ AF Y KAC LNN GC+ LG Y G
Sbjct: 163 YSKACELNYGDGCAILGDIYHNGE-GVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFFG 221
Query: 253 RYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEV 312
V +D +KAF ++ +AC++ A++C+ +G Y G+ V KDL+KA + + C++ D
Sbjct: 222 ESVTQDLKKAFGYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAK 281
Query: 313 GCFALAGMYYNMK----DKENAIMIYDKGCKLGMKQ 344
GC++LA + K ++ +K CKLG+K+
Sbjct: 282 GCYSLAAFFNEGKGVARGEKQMTENLEKSCKLGLKK 317
Score = 149 bits (376), Expect = 5e-35
Identities = 90/287 (31%), Positives = 145/287 (50%), Gaps = 15/287 (5%)
Query: 30 FLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYEN---GQGTRIDYKKALEYY 86
FLG+ Y ++++A YF+KAC ++GC L Y + +KA+E+
Sbjct: 36 FLGIT--IYTDKDFTRAKEYFEKACELHDADGCIILRETYSKVILKGSAKESIEKAIEHI 93
Query: 87 KT--ACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRK 144
T AC+++D E C L Y + + A++ Y+K+C L + E C Y+
Sbjct: 94 ATAKACKSNDAEKCKDLAEFY----FNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDM 149
Query: 145 IKG--NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDG 202
IKG + + YY K+C + GC +LG Y G V Q+ KA YY KAC L++G
Sbjct: 150 IKGLKKDKKDLEYYSKACELNYGDGCAILGDIYHNG-EGVTQNFKKAFKYYSKACELNNG 208
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKA 262
+ C LG + G++ + +D + AF Y KAC LN + C +G Y G V KD +KA
Sbjct: 209 EGCSKLGGDYFFGES-VTQDLKKAFGYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKA 267
Query: 263 FNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMG 309
F + +AC++ A C + +++G V + ++ +N E+ C +G
Sbjct: 268 FEYSAKACELNDAKGCYSLAAFFNEGKGVARGEKQMTENLEKSCKLG 314
Score = 81.3 bits (199), Expect = 2e-14
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 2/127 (1%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
N+ KA Y+ KAC EGC++LG Y G+ D KKA YY AC+ ++ C +
Sbjct: 191 NFKKAFKYYSKACELNNGEGCSKLGGDYFFGESVTQDLKKAFGYYSKACELNEALTCTLV 250
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKS 159
G Y +G G T++ ++A + AKAC L + CY+L ++ + + Q +KS
Sbjct: 251 GEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYSLAAFFNEGKGVARGEKQMTENLEKS 310
Query: 160 CNFDMAK 166
C + K
Sbjct: 311 CKLGLKK 317
Score = 60.8 bits (146), Expect = 2e-08
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 15/137 (10%)
Query: 220 DEDFEVAFDYLQKACGLNNSGGCASLGSMY---MLGRYVKKDPQKAFNFF--KQACDMGS 274
D+DF A +Y +KAC L+++ GC L Y +L K+ +KA +AC
Sbjct: 44 DKDFTRAKEYFEKACELHDADGCIILRETYSKVILKGSAKESIEKAIEHIATAKACKSND 103
Query: 275 AVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNM-----KDKEN 329
A C + Y + DL+ AL+ Y + C + + GC A Y +M KDK++
Sbjct: 104 AEKCKDLAEFYFNAN----DLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKD 159
Query: 330 AIMIYDKGCKLGMKQAC 346
+ Y K C+L C
Sbjct: 160 -LEYYSKACELNYGDGC 175
Score = 52.8 bits (125), Expect = 6e-06
Identities = 29/98 (29%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQ---GDAVPKDLRKALDNYE--RGCDM 308
Y KD +A +F++AC++ A C + YS+ + + + KA+++ + C
Sbjct: 42 YTDKDFTRAKEYFEKACELHDADGCIILRETYSKVILKGSAKESIEKAIEHIATAKACKS 101
Query: 309 GDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQAC 346
D C LA Y+N D +NA+ Y K CKL + C
Sbjct: 102 NDAEKCKDLAEFYFNANDLKNALEYYSKSCKLNNVEGC 139
>gb|AAM66150.1|AF326629_1 (AF326629) JHP1437-like protein [Helicobacter pylori]
Length = 325
Score = 174 bits (440), Expect = 2e-42
Identities = 92/280 (32%), Positives = 152/280 (53%), Gaps = 15/280 (5%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAID------AYAKACVLKHP 131
++ +A +Y++ AC+++D +GC L Y + + +N +E+I+ A AKAC
Sbjct: 45 NFTRAKKYFEKACKSNDADGCAILREAYSKAIAR-ENARESIEKALEHTATAKACKSNDA 103
Query: 132 ESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVI 191
E C +L Y + A+ YY KSC + +GC +L + ++ + + K +
Sbjct: 104 EKCRDLAEFYFNV--NDLKNALEYYSKSCKLNNVEGC-MLSATFYNDMIKGLKKDKKDLE 160
Query: 192 YYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYML 251
YY KAC L+ G C LG ++ NG+ G+ +D + AF Y KAC LNN G + LG Y
Sbjct: 161 YYSKACELNYGDGCAILGDIYHNGE-GVAKDLKKAFQYYSKACELNNGEGYSKLGGAYFF 219
Query: 252 GRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDE 311
G V +D +KAF ++ +AC + A++C+ +G Y G+ V KDL+KA + + C++ D
Sbjct: 220 GEGVTQDLKKAFGYYSKACKLNEALTCTLVGEFYRDGEGVAKDLKKAFEYSAKACELNDA 279
Query: 312 VGCFALAGMYYNMK----DKENAIMIYDKGCKLGMKQACE 347
GC+ALA + K ++ +K CKLG+K+ C+
Sbjct: 280 KGCYALAAFFNEAKGVARGEKQTTENLEKSCKLGLKETCD 319
Score = 151 bits (382), Expect = 1e-35
Identities = 89/284 (31%), Positives = 141/284 (49%), Gaps = 13/284 (4%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENG---QGTRIDYKKALEYYKT--ACQA 92
Y N+++A YF+KAC ++GC L Y + R +KALE+ T AC++
Sbjct: 41 YTDKNFTRAKKYFEKACKSNDADGCAILREAYSKAIARENARESIEKALEHTATAKACKS 100
Query: 93 DDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKG--NAD 150
+D E C L Y + + A++ Y+K+C L + E C Y+ IKG
Sbjct: 101 NDAEKCRDLAEFY----FNVNDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDK 156
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS 210
+ + YY K+C + GC +LG Y G V + KA YY KAC L++G+ LG
Sbjct: 157 KDLEYYSKACELNYGDGCAILGDIYHNG-EGVAKDLKKAFQYYSKACELNNGEGYSKLGG 215
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
+ G+ G+ +D + AF Y KAC LN + C +G Y G V KD +KAF + +AC
Sbjct: 216 AYFFGE-GVTQDLKKAFGYYSKACKLNEALTCTLVGEFYRDGEGVAKDLKKAFEYSAKAC 274
Query: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGC 314
++ A C + +++ V + ++ +N E+ C +G + C
Sbjct: 275 ELNDAKGCYALAAFFNEAKGVARGEKQTTENLEKSCKLGLKETC 318
Score = 99.0 bits (245), Expect = 7e-20
Identities = 66/213 (30%), Positives = 101/213 (46%), Gaps = 6/213 (2%)
Query: 33 VAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENG-QGTRIDYKKALEYYKTACQ 91
+AE + + A Y+ K+C EGC Y + +G + D KK LEYY AC+
Sbjct: 109 LAEFYFNVNDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKD-KKDLEYYSKACE 167
Query: 92 ADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLG--IIYDRKIKGNA 149
+ +GC LG +Y G G ++ ++A Y+KAC L + E LG + + +
Sbjct: 168 LNYGDGCAILGDIYHNGEGVAKDLKKAFQYYSKACELNNGEGYSKLGGAYFFGEGVTQDL 227
Query: 150 DQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALG 209
+A YY K+C + A C ++G Y G V + KA Y KAC L+D + C AL
Sbjct: 228 KKAFGYYSKACKLNEALTCTLVGEFYRDG-EGVAKDLKKAFEYSAKACELNDAKGCYALA 286
Query: 210 SLFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
+ F N G+ + + L+K+C L C
Sbjct: 287 AFF-NEAKGVARGEKQTTENLEKSCKLGLKETC 318
>gb|AAM66149.1|AF326628_1 (AF326628) JHP1437-like protein [Helicobacter pylori]
Length = 310
Score = 169 bits (429), Expect = 3e-41
Identities = 87/253 (34%), Positives = 142/253 (55%), Gaps = 9/253 (3%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGL---GTTQNYQEAID--AYAKACVLKHPE 132
D+ +A EY++ AC+ +D +GC L Y + + ++ ++A++ A AKAC E
Sbjct: 44 DFTRAKEYFEKACRLNDADGCAILREAYSKVILKGSARESIEKALEHTATAKACKSNDAE 103
Query: 133 SCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIY 192
C +L Y + A+ YY KSC + +GC +L + ++ + + K + Y
Sbjct: 104 KCKDLAEFYFNA--NDLKNALEYYSKSCKLNNVEGC-MLSATFYNDMIKGLKKDKKDLEY 160
Query: 193 YLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLG 252
Y KAC L+ G C LG ++ NG+ G+ ++F+ AF Y KAC LNN GC+ LG Y LG
Sbjct: 161 YSKACELNYGDGCAILGDIYHNGE-GVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFLG 219
Query: 253 RYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEV 312
V +D +KAF ++ +AC++ A++C+ +G Y G+ V KDL+KA + + C++ D
Sbjct: 220 ESVTQDLKKAFGYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAK 279
Query: 313 GCFALAGMYYNMK 325
GC+ALA +K
Sbjct: 280 GCYALAAFLMGVK 292
Score = 134 bits (338), Expect = 1e-30
Identities = 83/248 (33%), Positives = 125/248 (49%), Gaps = 13/248 (5%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYEN---GQGTRIDYKKALEYYKT--ACQA 92
Y ++++A YF+KAC ++GC L Y R +KALE+ T AC++
Sbjct: 40 YTDKDFTRAKEYFEKACRLNDADGCAILREAYSKVILKGSARESIEKALEHTATAKACKS 99
Query: 93 DDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKG--NAD 150
+D E C L Y + + A++ Y+K+C L + E C Y+ IKG
Sbjct: 100 NDAEKCKDLAEFY----FNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDK 155
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS 210
+ + YY K+C + GC +LG Y G V Q+ KA YY KAC L++G+ C LG
Sbjct: 156 KDLEYYSKACELNYGDGCAILGDIYHNG-EGVTQNFKKAFKYYSKACELNNGEGCSKLGG 214
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
+ G++ + +D + AF Y KAC LN + C +G Y G V KD +KAF + +AC
Sbjct: 215 DYFLGES-VTQDLKKAFGYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKAC 273
Query: 271 DMGSAVSC 278
++ A C
Sbjct: 274 ELNDAKGC 281
Score = 103 bits (258), Expect = 2e-21
Identities = 63/181 (34%), Positives = 92/181 (50%), Gaps = 5/181 (2%)
Query: 33 VAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENG-QGTRIDYKKALEYYKTACQ 91
+AE + + + A Y+ K+C EGC Y + +G + D KK LEYY AC+
Sbjct: 108 LAEFYFNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKD-KKDLEYYSKACE 166
Query: 92 ADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNA 149
+ +GC LG +Y G G TQN+++A Y+KAC L + E C LG Y + +
Sbjct: 167 LNYGDGCAILGDIYHNGEGVTQNFKKAFKYYSKACELNNGEGCSKLGGDYFLGESVTQDL 226
Query: 150 DQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALG 209
+A YY K+C + A C ++G Y G V + KA Y KAC L+D + C AL
Sbjct: 227 KKAFGYYSKACELNEALTCTLVGEFYRDG-EGVTKDLKKAFEYSAKACELNDAKGCYALA 285
Query: 210 S 210
+
Sbjct: 286 A 286
Score = 62.8 bits (151), Expect = 6e-09
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 15/137 (10%)
Query: 220 DEDFEVAFDYLQKACGLNNSGGCASLGSMY---MLGRYVKKDPQKAFNF--FKQACDMGS 274
D+DF A +Y +KAC LN++ GCA L Y +L ++ +KA +AC
Sbjct: 42 DKDFTRAKEYFEKACRLNDADGCAILREAYSKVILKGSARESIEKALEHTATAKACKSND 101
Query: 275 AVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNM-----KDKEN 329
A C + Y + DL+ AL+ Y + C + + GC A Y +M KDK++
Sbjct: 102 AEKCKDLAEFYFNAN----DLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDKKD 157
Query: 330 AIMIYDKGCKLGMKQAC 346
+ Y K C+L C
Sbjct: 158 -LEYYSKACELNYGDGC 173
Score = 53.1 bits (126), Expect = 5e-06
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQ---GDAVPKDLRKALDNYE--RGCDM 308
Y KD +A +F++AC + A C+ + YS+ + + + KAL++ + C
Sbjct: 40 YTDKDFTRAKEYFEKACRLNDADGCAILREAYSKVILKGSARESIEKALEHTATAKACKS 99
Query: 309 GDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQAC 346
D C LA Y+N D +NA+ Y K CKL + C
Sbjct: 100 NDAEKCKDLAEFYFNANDLKNALEYYSKSCKLNNVEGC 137
>ref|NP_222869.1| (NC_000921) putative [Helicobacter pylori J99]
pir||F71968 hypothetical protein jhp0148 - Helicobacter pylori (strain J99)
gb|AAD05729.1| (AE001453) putative [Helicobacter pylori J99]
Length = 305
Score = 159 bits (401), Expect = 6e-38
Identities = 84/208 (40%), Positives = 119/208 (56%), Gaps = 6/208 (2%)
Query: 146 KGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQAC 205
+G+ +AV +Y++SCN M GC LG YE G V Q+ KAV YY + C L + AC
Sbjct: 41 RGDYHRAVAFYKRSCNLRMGVGCTSLGSMYEYGD-GVDQNISKAVFYYRRGCNLRNHLAC 99
Query: 206 RALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNF 265
+LGS++E+GD G+ +DF A Y ++ C L C SLG MY G VK++ KA +F
Sbjct: 100 ASLGSMYEDGD-GVQKDFPKAIYYYRRGCHLKGGVSCGSLGFMYFNGTGVKQNYAKALSF 158
Query: 266 FKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMK 325
K AC + +SC+ +G+MY V KDL+KAL N++RGC + D C +L +Y
Sbjct: 159 SKYACSLNYGISCNFVGYMYKSAKGVEKDLKKALANFKRGCHLKDGASCVSLGYLYEAGM 218
Query: 326 D----KENAIMIYDKGCKLGMKQACENL 349
D +E A+ +Y KGC L C N+
Sbjct: 219 DVKQNEEQALNLYKKGCSLKEGSGCHNV 246
Score = 159 bits (401), Expect = 6e-38
Identities = 86/278 (30%), Positives = 149/278 (52%), Gaps = 8/278 (2%)
Query: 21 HLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYK 80
HL + +A +A K G+Y +A +++K++CN + GCT LG +YE G G +
Sbjct: 22 HLVATTGEKYFKMANQALKRGDYHRAVAFYKRSCNLRMGVGCTSLGSMYEYGDGVDQNIS 81
Query: 81 KALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII 140
KA+ YY+ C + C LG +Y++G G +++ +AI Y + C LK SC +LG +
Sbjct: 82 KAVFYYRRGCNLRNHLACASLGSMYEDGDGVQKDFPKAIYYYRRGCHLKGGVSCGSLGFM 141
Query: 141 Y--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACR 198
Y +K N +A+++ + +C+ + C +G Y K V++ KA+ + + C
Sbjct: 142 YFNGTGVKQNYAKALSFSKYACSLNYGISCNFVGYMY-KSAKGVEKDLKKALANFKRGCH 200
Query: 199 LDDGQACRALGSLFENGDAGLD--EDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVK 256
L DG +C +LG L+E AG+D ++ E A + +K C L GC ++ MY G+
Sbjct: 201 LKDGASCVSLGYLYE---AGMDVKQNEEQALNLYKKGCSLKEGSGCHNVAVMYYTGKGAP 257
Query: 257 KDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKD 294
KD +KA +++K+ C +G + SC + + + D + D
Sbjct: 258 KDLEKATSYYKKGCALGFSGSCKVLEVIGKESDNLQDD 295
>ref|NP_206959.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||H64539 conserved hypothetical secreted protein HP0160 - Helicobacter
pylori (strain 26695)
gb|AAD07230.1| (AE000537) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 306
Score = 156 bits (395), Expect = 3e-37
Identities = 84/264 (31%), Positives = 143/264 (53%), Gaps = 4/264 (1%)
Query: 17 SLNAHLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTR 76
S +++L + +A +A+K G+Y KA +++K++CN V GCT LG +YE+G G
Sbjct: 18 SCSSYLVATTGEKYFKMATQAFKRGDYHKAVAFYKRSCNLRVGVGCTSLGSMYEDGDGVD 77
Query: 77 IDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYN 136
+ KA+ YY+ C + C LG +Y++G G +N +AI Y + C LK SC +
Sbjct: 78 QNITKAVFYYRRGCNLRNHLACASLGSMYEDGDGVQKNLPKAIYYYRRGCHLKGGVSCGS 137
Query: 137 LGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYL 194
LG +Y +K N +A+ + +C+ + C +G Y + V++ KA+ +
Sbjct: 138 LGFMYFNGTGVKQNYAKALFLSKYACSLNYGISCNFVGYMY-RNAKGVQKDLKKALANFK 196
Query: 195 KACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRY 254
+ C L DG +C +LG ++E G + ++ E A + +K C L GC ++ MY G+
Sbjct: 197 RGCHLKDGASCVSLGYMYEVG-MDVKQNGEQALNLYKKGCYLKRGSGCHNVAVMYYTGKG 255
Query: 255 VKKDPQKAFNFFKQACDMGSAVSC 278
V KD KA +++K+ C +G + SC
Sbjct: 256 VPKDLDKAISYYKKGCTLGFSGSC 279
Score = 153 bits (386), Expect = 3e-36
Identities = 82/244 (33%), Positives = 130/244 (52%), Gaps = 4/244 (1%)
Query: 76 RIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCY 135
R DY KA+ +YK +C GC LG +Y++G G QN +A+ Y + C L++ +C
Sbjct: 41 RGDYHKAVAFYKRSCNLRVGVGCTSLGSMYEDGDGVDQNITKAVFYYRRGCNLRNHLACA 100
Query: 136 NLGIIYDRK--IKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYY 193
+LG +Y+ ++ N +A+ YY++ C+ C LG Y G VKQ+ KA+
Sbjct: 101 SLGSMYEDGDGVQKNLPKAIYYYRRGCHLKGGVSCGSLGFMYFNG-TGVKQNYAKALFLS 159
Query: 194 LKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR 253
AC L+ G +C +G ++ N G+ +D + A ++ C L + C SLG MY +G
Sbjct: 160 KYACSLNYGISCNFVGYMYRNAK-GVQKDLKKALANFKRGCHLKDGASCVSLGYMYEVGM 218
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVG 313
VK++ ++A N +K+ C + C + MY G VPKDL KA+ Y++GC +G
Sbjct: 219 DVKQNGEQALNLYKKGCYLKRGSGCHNVAVMYYTGKGVPKDLDKAISYYKKGCTLGFSGS 278
Query: 314 CFAL 317
C L
Sbjct: 279 CKVL 282
Score = 149 bits (375), Expect = 6e-35
Identities = 82/208 (39%), Positives = 117/208 (55%), Gaps = 6/208 (2%)
Query: 146 KGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQAC 205
+G+ +AV +Y++SCN + GC LG YE G V Q+ KAV YY + C L + AC
Sbjct: 41 RGDYHKAVAFYKRSCNLRVGVGCTSLGSMYEDGD-GVDQNITKAVFYYRRGCNLRNHLAC 99
Query: 206 RALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNF 265
+LGS++E+GD G+ ++ A Y ++ C L C SLG MY G VK++ KA
Sbjct: 100 ASLGSMYEDGD-GVQKNLPKAIYYYRRGCHLKGGVSCGSLGFMYFNGTGVKQNYAKALFL 158
Query: 266 FKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY-YNM 324
K AC + +SC+ +G+MY V KDL+KAL N++RGC + D C +L MY M
Sbjct: 159 SKYACSLNYGISCNFVGYMYRNAKGVQKDLKKALANFKRGCHLKDGASCVSLGYMYEVGM 218
Query: 325 KDKEN---AIMIYDKGCKLGMKQACENL 349
K+N A+ +Y KGC L C N+
Sbjct: 219 DVKQNGEQALNLYKKGCYLKRGSGCHNV 246
Score = 142 bits (359), Expect = 4e-33
Identities = 84/247 (34%), Positives = 132/247 (53%), Gaps = 8/247 (3%)
Query: 114 NYQEAIDAYAKACVLKHPESCYNLGIIYDRK--IKGNADQAVTYYQKSCNFDMAKGCYVL 171
+Y +A+ Y ++C L+ C +LG +Y+ + N +AV YY++ CN C L
Sbjct: 43 DYHKAVAFYKRSCNLRVGVGCTSLGSMYEDGDGVDQNITKAVFYYRRGCNLRNHLACASL 102
Query: 172 GVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQ 231
G YE G V+++ KA+ YY + C L G +C +LG ++ NG G+ +++ A +
Sbjct: 103 GSMYEDGD-GVQKNLPKAIYYYRRGCHLKGGVSCGSLGFMYFNG-TGVKQNYAKALFLSK 160
Query: 232 KACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAV 291
AC LN C +G MY + V+KD +KA FK+ C + SC +G+MY G V
Sbjct: 161 YACSLNYGISCNFVGYMYRNAKGVQKDLKKALANFKRGCHLKDGASCVSLGYMYEVGMDV 220
Query: 292 PKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACE 347
++ +AL+ Y++GC + GC +A MYY KD + AI Y KGC LG +C+
Sbjct: 221 KQNGEQALNLYKKGCYLKRGSGCHNVAVMYYTGKGVPKDLDKAISYYKKGCTLGFSGSCK 280
Query: 348 NLTKLRG 354
L ++ G
Sbjct: 281 VLEEVIG 287
Score = 67.8 bits (164), Expect = 2e-10
Identities = 33/100 (33%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVG 313
+ + D KA F+K++C++ V C+ +G MY GD V +++ KA+ Y RGC++ + +
Sbjct: 39 FKRGDYHKAVAFYKRSCNLRVGVGCTSLGSMYEDGDGVDQNITKAVFYYRRGCNLRNHLA 98
Query: 314 CFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENL 349
C +L MY + K+ AI Y +GC L +C +L
Sbjct: 99 CASLGSMYEDGDGVQKNLPKAIYYYRRGCHLKGGVSCGSL 138
Score = 58.9 bits (141), Expect = 8e-08
Identities = 33/108 (30%), Positives = 48/108 (43%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
KA + FK+ C+ C LG +YE G + + ++AL YK C GC + +
Sbjct: 190 KALANFKRGCHLKDGASCVSLGYMYEVGMDVKQNGEQALNLYKKGCYLKRGSGCHNVAVM 249
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQA 152
Y G G ++ +AI Y K C L SC L + +K D A
Sbjct: 250 YYTGKGVPKDLDKAISYYKKGCTLGFSGSCKVLEEVIGKKSDDLQDDA 297
>gb|AAL47062.1|AF326614_1 (AF326614) JHP318-like protein [Helicobacter pylori]
Length = 216
Score = 155 bits (392), Expect = 7e-37
Identities = 80/203 (39%), Positives = 117/203 (57%), Gaps = 6/203 (2%)
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS 210
QA Y++K+C + GC LG Y+ G V+++ KA +Y KAC L +G C+ LGS
Sbjct: 13 QAKKYFEKACGLNNGGGCGALGDLYDDG-KGVEKNLIKAAYFYSKACDLKEGMGCKRLGS 71
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
L+ +G ++++ A + KAC LNN GGC +LG +Y G V+K+ KA F+ +AC
Sbjct: 72 LYYHG-RDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIKAAQFYSKAC 130
Query: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKD 326
++ + C +G +Y G+ V KDL KA Y + CD+ + +GCF L +YYN KD
Sbjct: 131 ELKDGLGCKDLGTLYYNGEGVEKDLIKAAYLYSKACDLKEGLGCFNLGALYYNGKGVEKD 190
Query: 327 KENAIMIYDKGCKLGMKQACENL 349
A Y K CKLG ++ACE L
Sbjct: 191 LTKAAYFYSKACKLGSQEACEAL 213
Score = 127 bits (320), Expect = 1e-28
Identities = 74/212 (34%), Positives = 110/212 (50%), Gaps = 4/212 (1%)
Query: 36 KAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDR 95
K+ ++ +Y +A YF+KAC GC LG +Y++G+G + KA +Y AC +
Sbjct: 4 KSSEAKDYIQAKKYFEKACGLNNGGGCGALGDLYDDGKGVEKNLIKAAYFYSKACDLKEG 63
Query: 96 EGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDR--KIKGNADQAV 153
GC LG LY G +N +A Y+KAC L + C NLG++Y + ++ N +A
Sbjct: 64 MGCKRLGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIKAA 123
Query: 154 TYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFE 213
+Y K+C GC LG Y G V++ KA Y KAC L +G C LG+L+
Sbjct: 124 QFYSKACELKDGLGCKDLGTLYYNG-EGVEKDLIKAAYLYSKACDLKEGLGCFNLGALYY 182
Query: 214 NGDAGLDEDFEVAFDYLQKACGLNNSGGCASL 245
NG G+++D A + KAC L + C +L
Sbjct: 183 NG-KGVEKDLTKAAYFYSKACKLGSQEACEAL 213
Score = 119 bits (299), Expect = 4e-26
Identities = 68/179 (37%), Positives = 97/179 (53%), Gaps = 9/179 (5%)
Query: 182 VKQSNHKAVI----YYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLN 237
VK S K I Y+ KAC L++G C ALG L+++G G++++ A + KAC L
Sbjct: 3 VKSSEAKDYIQAKKYFEKACGLNNGGGCGALGDLYDDGK-GVEKNLIKAAYFYSKACDLK 61
Query: 238 NSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRK 297
GC LGS+Y GR V+K+ KA F+ +ACD+ + C +G +Y +G+ V K+L K
Sbjct: 62 EGMGCKRLGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIK 121
Query: 298 ALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENLTKL 352
A Y + C++ D +GC L +YYN KD A +Y K C L C NL L
Sbjct: 122 AAQFYSKACELKDGLGCKDLGTLYYNGEGVEKDLIKAAYLYSKACDLKEGLGCFNLGAL 180
>gb|AAB63298.1| (AF008565) Orf2 [Helicobacter pylori]
Length = 250
Score = 153 bits (386), Expect = 3e-36
Identities = 83/222 (37%), Positives = 130/222 (58%), Gaps = 12/222 (5%)
Query: 136 NLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLK 195
NLGI + K + QA T+++K+C GC LG YE+G V + KA+ +Y K
Sbjct: 34 NLGI--ESAKKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEG-KGVGKDLKKAIQFYTK 90
Query: 196 ACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYV 255
+C L+DG C LG+L+ NG G+ +D + A Y KAC LN++ GC LGS++ G
Sbjct: 91 SCELNDGYGCNLLGNLYYNGQ-GVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGT 149
Query: 256 KKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCF 315
KD +KA + +++ACD+ + C G++YS V K+ ++A+ Y + C++ D GC+
Sbjct: 150 PKDLRKALDLYEKACDLKDSPGCINAGYIYS----VTKNFKEAIVRYSQACELNDGRGCY 205
Query: 316 ALAGMYYNM----KDKENAIMIYDKGCKLGMKQACENLTKLR 353
L M YN KD++ A+ + KGCK G+K+AC+ L +L+
Sbjct: 206 NLGVMQYNAQGTAKDEKQAVENFKKGCKSGVKEACDALKELK 247
Score = 120 bits (301), Expect = 2e-26
Identities = 68/209 (32%), Positives = 111/209 (52%), Gaps = 8/209 (3%)
Query: 39 KSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGC 98
K ++++A ++F+KAC GC LG YE G+G D KKA+++Y +C+ +D GC
Sbjct: 41 KKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKSCELNDGYGC 100
Query: 99 FGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD--QAVTYY 156
LG LY G G +++ ++A Y+KAC L H E C LG ++ + D +A+ Y
Sbjct: 101 NLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLY 160
Query: 157 QKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGD 216
+K+C+ + GC G Y V ++ +A++ Y +AC L+DG+ C LG + N
Sbjct: 161 EKACDLKDSPGCINAGYIY-----SVTKNFKEAIVRYSQACELNDGRGCYNLGVMQYNAQ 215
Query: 217 AGLDEDFEVAFDYLQKACGLNNSGGCASL 245
G +D + A + +K C C +L
Sbjct: 216 -GTAKDEKQAVENFKKGCKSGVKEACDAL 243
Score = 118 bits (295), Expect = 1e-25
Identities = 69/207 (33%), Positives = 106/207 (50%), Gaps = 8/207 (3%)
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYV 170
Q++ +A + KAC LK+ C LG Y+ + + + +A+ +Y KSC + GC +
Sbjct: 43 QDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKSCELNDGYGCNL 102
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
LG Y G V + KA YY KAC L+ + C LGSL G G +D A D
Sbjct: 103 LGNLYYNG-QGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYG-VGTPKDLRKALDLY 160
Query: 231 QKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDA 290
+KAC L +S GC + G +Y V K+ ++A + QAC++ C +G M
Sbjct: 161 EKACDLKDSPGCINAGYIYS----VTKNFKEAIVRYSQACELNDGRGCYNLGVMQYNAQG 216
Query: 291 VPKDLRKALDNYERGCDMGDEVGCFAL 317
KD ++A++N+++GC G + C AL
Sbjct: 217 TAKDEKQAVENFKKGCKSGVKEACDAL 243
Score = 115 bits (289), Expect = 6e-25
Identities = 63/167 (37%), Positives = 87/167 (51%), Gaps = 3/167 (1%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
KA ++ K+C GC LG +Y NGQG D KKA +YY AC + EGC LG L
Sbjct: 83 KAIQFYTKSCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSL 142
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDM 164
+ G+GT ++ ++A+D Y KAC LK C N G IY + N +A+ Y ++C +
Sbjct: 143 HHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIY--SVTKNFKEAIVRYSQACELND 200
Query: 165 AKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSL 211
+GCY LGV K +AV + K C+ +AC AL L
Sbjct: 201 GRGCYNLGVMQYNAQGTAKDEK-QAVENFKKGCKSGVKEACDALKEL 246
Score = 72.8 bits (177), Expect = 6e-12
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 256 KKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCF 315
K+D +A F++AC++ + C +G Y +G V KDL+KA+ Y + C++ D GC
Sbjct: 42 KQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKSCELNDGYGCN 101
Query: 316 ALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
L +YYN KD + A Y K C L + C L L Y
Sbjct: 102 LLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHY 145
>gb|AAC24210.1| (AF053708) cysteine-rich protein; HcpA [Helicobacter pylori]
Length = 250
Score = 153 bits (386), Expect = 3e-36
Identities = 83/222 (37%), Positives = 130/222 (58%), Gaps = 12/222 (5%)
Query: 136 NLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLK 195
NLGI + K + QA T+++K+C GC LG YE+G V + KA+ +Y K
Sbjct: 34 NLGI--ESAKKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEG-KGVGKDLKKAIQFYTK 90
Query: 196 ACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYV 255
+C L+DG C LG+L+ NG G+ +D + A Y KAC LN++ GC LGS++ G
Sbjct: 91 SCELNDGYGCNLLGNLYYNGQ-GVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGT 149
Query: 256 KKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCF 315
KD +KA + +++ACD+ + C G++YS V K+ ++A+ Y + C++ D GC+
Sbjct: 150 PKDLRKALDLYEKACDLKDSPGCINAGYIYS----VTKNFKEAIVRYSQACELNDGRGCY 205
Query: 316 ALAGMYYNM----KDKENAIMIYDKGCKLGMKQACENLTKLR 353
L M YN KD++ A+ + KGCK G+K+AC+ L +L+
Sbjct: 206 NLGVMQYNAQGTAKDEKQAVENFKKGCKSGVKEACDALKELK 247
Score = 120 bits (301), Expect = 2e-26
Identities = 68/209 (32%), Positives = 111/209 (52%), Gaps = 8/209 (3%)
Query: 39 KSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGC 98
K ++++A ++F+KAC GC LG YE G+G D KKA+++Y +C+ +D GC
Sbjct: 41 KKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKSCELNDGYGC 100
Query: 99 FGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD--QAVTYY 156
LG LY G G +++ ++A Y+KAC L H E C LG ++ + D +A+ Y
Sbjct: 101 NLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLY 160
Query: 157 QKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGD 216
+K+C+ + GC G Y V ++ +A++ Y +AC L+DG+ C LG + N
Sbjct: 161 EKACDLKDSPGCINAGYIY-----SVTKNFKEAIVRYSQACELNDGRGCYNLGVMQYNAQ 215
Query: 217 AGLDEDFEVAFDYLQKACGLNNSGGCASL 245
G +D + A + +K C C +L
Sbjct: 216 -GTAKDEKQAVENFKKGCKSGVKEACDAL 243
Score = 118 bits (295), Expect = 1e-25
Identities = 69/207 (33%), Positives = 106/207 (50%), Gaps = 8/207 (3%)
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYV 170
Q++ +A + KAC LK+ C LG Y+ + + + +A+ +Y KSC + GC +
Sbjct: 43 QDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKSCELNDGYGCNL 102
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
LG Y G V + KA YY KAC L+ + C LGSL G G +D A D
Sbjct: 103 LGNLYYNG-QGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYG-VGTPKDLRKALDLY 160
Query: 231 QKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDA 290
+KAC L +S GC + G +Y V K+ ++A + QAC++ C +G M
Sbjct: 161 EKACDLKDSPGCINAGYIYS----VTKNFKEAIVRYSQACELNDGRGCYNLGVMQYNAQG 216
Query: 291 VPKDLRKALDNYERGCDMGDEVGCFAL 317
KD ++A++N+++GC G + C AL
Sbjct: 217 TAKDEKQAVENFKKGCKSGVKEACDAL 243
Score = 115 bits (289), Expect = 6e-25
Identities = 63/167 (37%), Positives = 87/167 (51%), Gaps = 3/167 (1%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
KA ++ K+C GC LG +Y NGQG D KKA +YY AC + EGC LG L
Sbjct: 83 KAIQFYTKSCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSL 142
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDM 164
+ G+GT ++ ++A+D Y KAC LK C N G IY + N +A+ Y ++C +
Sbjct: 143 HHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIY--SVTKNFKEAIVRYSQACELND 200
Query: 165 AKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSL 211
+GCY LGV K +AV + K C+ +AC AL L
Sbjct: 201 GRGCYNLGVMQYNAQGTAKDEK-QAVENFKKGCKSGVKEACDALKEL 246
Score = 72.8 bits (177), Expect = 6e-12
Identities = 36/104 (34%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 256 KKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCF 315
K+D +A F++AC++ + C +G Y +G V KDL+KA+ Y + C++ D GC
Sbjct: 42 KQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKSCELNDGYGCN 101
Query: 316 ALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
L +YYN KD + A Y K C L + C L L Y
Sbjct: 102 LLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHY 145
>ref|NP_207009.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
sp|O25001|HCPA_HELPY HcpA protein precursor (Cysteine-rich 28 kDa protein)
pir||C64546 conserved hypothetical secreted protein HP0211 - Helicobacter
pylori (strain 26695)
gb|AAD07279.1| (AE000541) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 250
Score = 150 bits (378), Expect = 3e-35
Identities = 82/222 (36%), Positives = 128/222 (56%), Gaps = 12/222 (5%)
Query: 136 NLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLK 195
NLGI + K + QA T+++K+C GC LG YE+G V + KA+ +Y K
Sbjct: 34 NLGI--ESAKKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEG-KGVGKDLKKAIQFYTK 90
Query: 196 ACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYV 255
C L+DG C LG+L+ NG G+ +D + A Y KAC LN++ GC LGS++ G
Sbjct: 91 GCELNDGYGCNLLGNLYYNGQ-GVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGT 149
Query: 256 KKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCF 315
KD +KA + +++ACD+ + C G++YS V K+ ++A+ Y + C++ D GC+
Sbjct: 150 PKDLRKALDLYEKACDLKDSPGCINAGYIYS----VTKNFKEAIVRYSKACELKDGRGCY 205
Query: 316 ALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENLTKLR 353
L M YN KD++ A+ + KGCK +K+AC+ L +L+
Sbjct: 206 NLGVMQYNAQGTAKDEKQAVENFKKGCKSSVKEACDALKELK 247
Score = 121 bits (303), Expect = 1e-26
Identities = 69/209 (33%), Positives = 110/209 (52%), Gaps = 8/209 (3%)
Query: 39 KSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGC 98
K ++++A ++F+KAC GC LG YE G+G D KKA+++Y C+ +D GC
Sbjct: 41 KKQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGC 100
Query: 99 FGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD--QAVTYY 156
LG LY G G +++ ++A Y+KAC L H E C LG ++ + D +A+ Y
Sbjct: 101 NLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYGVGTPKDLRKALDLY 160
Query: 157 QKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGD 216
+K+C+ + GC G Y V ++ +A++ Y KAC L DG+ C LG + N
Sbjct: 161 EKACDLKDSPGCINAGYIY-----SVTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQ 215
Query: 217 AGLDEDFEVAFDYLQKACGLNNSGGCASL 245
G +D + A + +K C + C +L
Sbjct: 216 -GTAKDEKQAVENFKKGCKSSVKEACDAL 243
Score = 116 bits (291), Expect = 3e-25
Identities = 64/167 (38%), Positives = 85/167 (50%), Gaps = 3/167 (1%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
KA ++ K C GC LG +Y NGQG D KKA +YY AC + EGC LG L
Sbjct: 83 KAIQFYTKGCELNDGYGCNLLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSL 142
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDM 164
+ G+GT ++ ++A+D Y KAC LK C N G IY + N +A+ Y K+C
Sbjct: 143 HHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYIY--SVTKNFKEAIVRYSKACELKD 200
Query: 165 AKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSL 211
+GCY LGV K +AV + K C+ +AC AL L
Sbjct: 201 GRGCYNLGVMQYNAQGTAKDEK-QAVENFKKGCKSSVKEACDALKEL 246
Score = 112 bits (279), Expect = 8e-24
Identities = 66/207 (31%), Positives = 104/207 (49%), Gaps = 8/207 (3%)
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYV 170
Q++ +A + KAC LK+ C LG Y+ + + + +A+ +Y K C + GC +
Sbjct: 43 QDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCNL 102
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
LG Y G V + KA YY KAC L+ + C LGSL G G +D A D
Sbjct: 103 LGNLYYNG-QGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHYG-VGTPKDLRKALDLY 160
Query: 231 QKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDA 290
+KAC L +S GC + G +Y V K+ ++A + +AC++ C +G M
Sbjct: 161 EKACDLKDSPGCINAGYIYS----VTKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQG 216
Query: 291 VPKDLRKALDNYERGCDMGDEVGCFAL 317
KD ++A++N+++GC + C AL
Sbjct: 217 TAKDEKQAVENFKKGCKSSVKEACDAL 243
Score = 75.1 bits (183), Expect = 1e-12
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 256 KKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCF 315
K+D +A F++AC++ + C +G Y +G V KDL+KA+ Y +GC++ D GC
Sbjct: 42 KQDFAQAKTHFEKACELKNGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCN 101
Query: 316 ALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
L +YYN KD + A Y K C L + C L L Y
Sbjct: 102 LLGNLYYNGQGVSKDAKKASQYYSKACDLNHAEGCMVLGSLHHY 145
>ref|NP_223037.1| (NC_000921) putative [Helicobacter pylori J99]
pir||F71945 hypothetical protein jhp0318 - Helicobacter pylori (strain J99)
gb|AAD05894.1| (AE001468) putative [Helicobacter pylori J99]
Length = 251
Score = 148 bits (374), Expect = 8e-35
Identities = 89/249 (35%), Positives = 138/249 (54%), Gaps = 7/249 (2%)
Query: 36 KAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDR 95
K+ K+ ++ +A YF+KACN GC LG +Y++G+G + KA + Y AC+ +
Sbjct: 4 KSNKAKDFIQAKKYFEKACNLNYGGGCGALGDLYDDGKGVEKNLIKAAQPYTKACELKEG 63
Query: 96 EGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAV 153
GC L LY G G +N +A +KAC L + C NLG +Y+ ++ + +A
Sbjct: 64 LGCERLWSLYYYGRGVEKNLIKAAQYASKACDLNNGVGCKNLGFLYEYGEGVEKDLIKAA 123
Query: 154 TYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFE 213
Y K+C+ + GC VLG Y G V+++ KA +Y KAC L++G C LG L+
Sbjct: 124 QYASKACDLNNGSGCDVLGFLYGSG-KGVEKNLTKAAYFYSKACDLNEGLGCFNLGGLY- 181
Query: 214 NGDAGLDEDF-EVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDM 272
NG G+++D +VA+ Y KAC L S GC +L +Y+ G+ V+KD KA + +AC +
Sbjct: 182 NGQ-GVEKDLTKVAYLY-SKACELKESFGCGALAVLYINGQGVEKDLTKADQYISKACKL 239
Query: 273 GSAVSCSRM 281
G +C +
Sbjct: 240 GDQEACEAL 248
Score = 148 bits (373), Expect = 1e-34
Identities = 86/242 (35%), Positives = 127/242 (51%), Gaps = 5/242 (2%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNL 137
D+ +A +Y++ AC + GC LG LYD+G G +N +A Y KAC LK C L
Sbjct: 10 DFIQAKKYFEKACNLNYGGGCGALGDLYDDGKGVEKNLIKAAQPYTKACELKEGLGCERL 69
Query: 138 GIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLK 195
+Y R ++ N +A Y K+C+ + GC LG YE G V++ KA Y K
Sbjct: 70 WSLYYYGRGVEKNLIKAAQYASKACDLNNGVGCKNLGFLYEYGE-GVEKDLIKAAQYASK 128
Query: 196 ACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYV 255
AC L++G C LG L+ +G G++++ A + KAC LN GC +LG +Y G+ V
Sbjct: 129 ACDLNNGSGCDVLGFLYGSGK-GVEKNLTKAAYFYSKACDLNEGLGCFNLGGLYN-GQGV 186
Query: 256 KKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCF 315
+KD K + +AC++ + C + +Y G V KDL KA + C +GD+ C
Sbjct: 187 EKDLTKVAYLYSKACELKESFGCGALAVLYINGQGVEKDLTKADQYISKACKLGDQEACE 246
Query: 316 AL 317
AL
Sbjct: 247 AL 248
Score = 145 bits (366), Expect = 7e-34
Identities = 89/243 (36%), Positives = 130/243 (52%), Gaps = 9/243 (3%)
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYV 170
+++ +A + KAC L + C LG +YD + ++ N +A Y K+C GC
Sbjct: 9 KDFIQAKKYFEKACNLNYGGGCGALGDLYDDGKGVEKNLIKAAQPYTKACELKEGLGCER 68
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
L Y G V+++ KA Y KAC L++G C+ LG L+E G+ G+++D A Y
Sbjct: 69 LWSLYYYG-RGVEKNLIKAAQYASKACDLNNGVGCKNLGFLYEYGE-GVEKDLIKAAQYA 126
Query: 231 QKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDA 290
KAC LNN GC LG +Y G+ V+K+ KA F+ +ACD+ + C +G +Y+ G
Sbjct: 127 SKACDLNNGSGCDVLGFLYGSGKGVEKNLTKAAYFYSKACDLNEGLGCFNLGGLYN-GQG 185
Query: 291 VPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQAC 346
V KDL K Y + C++ + GC ALA +Y N KD A K CKLG ++AC
Sbjct: 186 VEKDLTKVAYLYSKACELKESFGCGALAVLYINGQGVEKDLTKADQYISKACKLGDQEAC 245
Query: 347 ENL 349
E L
Sbjct: 246 EAL 248
Score = 139 bits (350), Expect = 5e-32
Identities = 77/205 (37%), Positives = 108/205 (52%), Gaps = 5/205 (2%)
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS 210
QA Y++K+CN + GC LG Y+ G V+++ KA Y KAC L +G C L S
Sbjct: 13 QAKKYFEKACNLNYGGGCGALGDLYDDG-KGVEKNLIKAAQPYTKACELKEGLGCERLWS 71
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
L+ G G++++ A Y KAC LNN GC +LG +Y G V+KD KA + +AC
Sbjct: 72 LYYYG-RGVEKNLIKAAQYASKACDLNNGVGCKNLGFLYEYGEGVEKDLIKAAQYASKAC 130
Query: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNM---KDK 327
D+ + C +GF+Y G V K+L KA Y + CD+ + +GCF L G+Y KD
Sbjct: 131 DLNNGSGCDVLGFLYGSGKGVEKNLTKAAYFYSKACDLNEGLGCFNLGGLYNGQGVEKDL 190
Query: 328 ENAIMIYDKGCKLGMKQACENLTKL 352
+Y K C+L C L L
Sbjct: 191 TKVAYLYSKACELKESFGCGALAVL 215
>ref|NP_222918.1| (NC_000921) putative [Helicobacter pylori J99]
sp|Q9ZMM1|HCPA_HELPJ HcpA protein precursor (Cysteine-rich 28 kDa protein)
pir||B71961 hypothetical protein jhp0197 - Helicobacter pylori (strain J99)
gb|AAD05781.1| (AE001458) putative [Helicobacter pylori J99]
Length = 250
Score = 147 bits (371), Expect = 2e-34
Identities = 76/207 (36%), Positives = 120/207 (57%), Gaps = 10/207 (4%)
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS 210
QA +++K+C GC LG YE+G V + KA+ +Y K C L+DG CR LG+
Sbjct: 47 QAKAHFEKACELKEGFGCVFLGAFYEEG-KGVGKDLKKAIQFYTKGCELNDGYGCRLLGN 105
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
L+ NG G+ +D + A Y K+C LN++ GC LGS++ G KD +KA + +++AC
Sbjct: 106 LYYNGQ-GVSKDAKKASQYYSKSCELNHAEGCTVLGSLHHYGVGTPKDLRKALDLYEKAC 164
Query: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNM----KD 326
D+ + C G+MY V K+ ++A+ Y + C++ D GC+ L M YN KD
Sbjct: 165 DLKDSPGCINAGYMYG----VAKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQGTAKD 220
Query: 327 KENAIMIYDKGCKLGMKQACENLTKLR 353
++ A+ + KGCK +K+AC+ L +L+
Sbjct: 221 EKQAVENFKKGCKSSVKEACDALKELK 247
Score = 127 bits (319), Expect = 2e-28
Identities = 64/167 (38%), Positives = 96/167 (57%), Gaps = 1/167 (0%)
Query: 183 KQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
KQ +A ++ KAC L +G C LG+ +E G G+ +D + A + K C LN+ GC
Sbjct: 42 KQDFAQAKAHFEKACELKEGFGCVFLGAFYEEGK-GVGKDLKKAIQFYTKGCELNDGYGC 100
Query: 243 ASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNY 302
LG++Y G+ V KD +KA ++ ++C++ A C+ +G ++ G PKDLRKALD Y
Sbjct: 101 RLLGNLYYNGQGVSKDAKKASQYYSKSCELNHAEGCTVLGSLHHYGVGTPKDLRKALDLY 160
Query: 303 ERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACENL 349
E+ CD+ D GC MY K+ + AI+ Y K C+L + C NL
Sbjct: 161 EKACDLKDSPGCINAGYMYGVAKNFKEAIVRYSKACELKDGRGCYNL 207
Score = 120 bits (300), Expect = 3e-26
Identities = 68/212 (32%), Positives = 112/212 (52%), Gaps = 8/212 (3%)
Query: 36 KAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDR 95
++ K ++++A ++F+KAC GC LG YE G+G D KKA+++Y C+ +D
Sbjct: 38 ESVKKQDFAQAKAHFEKACELKEGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDG 97
Query: 96 EGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD--QAV 153
GC LG LY G G +++ ++A Y+K+C L H E C LG ++ + D +A+
Sbjct: 98 YGCRLLGNLYYNGQGVSKDAKKASQYYSKSCELNHAEGCTVLGSLHHYGVGTPKDLRKAL 157
Query: 154 TYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFE 213
Y+K+C+ + GC G Y V ++ +A++ Y KAC L DG+ C LG +
Sbjct: 158 DLYEKACDLKDSPGCINAGYMY-----GVAKNFKEAIVRYSKACELKDGRGCYNLGVMQY 212
Query: 214 NGDAGLDEDFEVAFDYLQKACGLNNSGGCASL 245
N G +D + A + +K C + C +L
Sbjct: 213 NAQ-GTAKDEKQAVENFKKGCKSSVKEACDAL 243
Score = 113 bits (283), Expect = 3e-24
Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 3/167 (1%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
KA ++ K C GC LG +Y NGQG D KKA +YY +C+ + EGC LG L
Sbjct: 83 KAIQFYTKGCELNDGYGCRLLGNLYYNGQGVSKDAKKASQYYSKSCELNHAEGCTVLGSL 142
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDM 164
+ G+GT ++ ++A+D Y KAC LK C N G +Y + N +A+ Y K+C
Sbjct: 143 HHYGVGTPKDLRKALDLYEKACDLKDSPGCINAGYMYG--VAKNFKEAIVRYSKACELKD 200
Query: 165 AKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSL 211
+GCY LGV K +AV + K C+ +AC AL L
Sbjct: 201 GRGCYNLGVMQYNAQGTAKDEK-QAVENFKKGCKSSVKEACDALKEL 246
Score = 111 bits (278), Expect = 1e-23
Identities = 66/207 (31%), Positives = 103/207 (48%), Gaps = 8/207 (3%)
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYV 170
Q++ +A + KAC LK C LG Y+ + + + +A+ +Y K C + GC +
Sbjct: 43 QDFAQAKAHFEKACELKEGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCRL 102
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
LG Y G V + KA YY K+C L+ + C LGSL G G +D A D
Sbjct: 103 LGNLYYNG-QGVSKDAKKASQYYSKSCELNHAEGCTVLGSLHHYG-VGTPKDLRKALDLY 160
Query: 231 QKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDA 290
+KAC L +S GC + G MY V K+ ++A + +AC++ C +G M
Sbjct: 161 EKACDLKDSPGCINAGYMYG----VAKNFKEAIVRYSKACELKDGRGCYNLGVMQYNAQG 216
Query: 291 VPKDLRKALDNYERGCDMGDEVGCFAL 317
KD ++A++N+++GC + C AL
Sbjct: 217 TAKDEKQAVENFKKGCKSSVKEACDAL 243
Score = 88.6 bits (218), Expect = 1e-16
Identities = 44/138 (31%), Positives = 67/138 (47%), Gaps = 4/138 (2%)
Query: 221 EDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSR 280
+DF A + +KAC L GC LG+ Y G+ V KD +KA F+ + C++ C
Sbjct: 43 QDFAQAKAHFEKACELKEGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCRL 102
Query: 281 MGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYY----NMKDKENAIMIYDK 336
+G +Y G V KD +KA Y + C++ GC L +++ KD A+ +Y+K
Sbjct: 103 LGNLYYNGQGVSKDAKKASQYYSKSCELNHAEGCTVLGSLHHYGVGTPKDLRKALDLYEK 162
Query: 337 GCKLGMKQACENLTKLRG 354
C L C N + G
Sbjct: 163 ACDLKDSPGCINAGYMYG 180
Score = 75.1 bits (183), Expect = 1e-12
Identities = 37/104 (35%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 256 KKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCF 315
K+D +A F++AC++ C +G Y +G V KDL+KA+ Y +GC++ D GC
Sbjct: 42 KQDFAQAKAHFEKACELKEGFGCVFLGAFYEEGKGVGKDLKKAIQFYTKGCELNDGYGCR 101
Query: 316 ALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
L +YYN KD + A Y K C+L + C L L Y
Sbjct: 102 LLGNLYYNGQGVSKDAKKASQYYSKSCELNHAEGCTVLGSLHHY 145
>gb|AAL47059.1|AF326610_1 (AF326610) JHP318-like protein [Helicobacter pylori]
Length = 213
Score = 142 bits (358), Expect = 6e-33
Identities = 76/208 (36%), Positives = 119/208 (56%), Gaps = 9/208 (4%)
Query: 146 KGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQAC 205
K + +A Y++K+C+ GC LG Y+ +V+++ KA +Y KAC L +G C
Sbjct: 8 KQDFSKARKYFEKACDLKYGGGCGALGDLYD----DVEKNLIKAAYFYSKACDLKEGMGC 63
Query: 206 RALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNF 265
+ LGSL+ +G ++++ A + KAC LNN GGC +LG +Y G V+K+ KA F
Sbjct: 64 KRLGSLYYHG-RDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIKAAQF 122
Query: 266 FKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMK 325
+ +AC++ + C +G +Y G+ V KDL KA Y + C++ + GC ALA +Y N +
Sbjct: 123 YSKACELKDGLGCKDLGTLYYNGEGVEKDLIKAAYLYSKACELKESFGCGALAVLYINGQ 182
Query: 326 DKENAIMIYD----KGCKLGMKQACENL 349
E ++ D K CKLG ++ACE L
Sbjct: 183 GVEKNLIKADQYISKACKLGDQEACEAL 210
Score = 120 bits (301), Expect = 2e-26
Identities = 73/211 (34%), Positives = 107/211 (50%), Gaps = 7/211 (3%)
Query: 37 AYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDRE 96
+Y ++SKA YF+KAC+ GC LG +Y++ + I KA +Y AC +
Sbjct: 5 SYDKQDFSKARKYFEKACDLKYGGGCGALGDLYDDVEKNLI---KAAYFYSKACDLKEGM 61
Query: 97 GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDR--KIKGNADQAVT 154
GC LG LY G +N +A Y+KAC L + C NLG++Y + ++ N +A
Sbjct: 62 GCKRLGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNLGVLYQKGEGVEKNLIKAAQ 121
Query: 155 YYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFEN 214
+Y K+C GC LG Y G V++ KA Y KAC L + C AL L+ N
Sbjct: 122 FYSKACELKDGLGCKDLGTLYYNG-EGVEKDLIKAAYLYSKACELKESFGCGALAVLYIN 180
Query: 215 GDAGLDEDFEVAFDYLQKACGLNNSGGCASL 245
G G++++ A Y+ KAC L + C +L
Sbjct: 181 GQ-GVEKNLIKADQYISKACKLGDQEACEAL 210
Score = 63.9 bits (154), Expect = 3e-09
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVG 313
Y K+D KA +F++ACD+ C +G +Y D V K+L KA Y + CD+ + +G
Sbjct: 6 YDKQDFSKARKYFEKACDLKYGGGCGALGDLY---DDVEKNLIKAAYFYSKACDLKEGMG 62
Query: 314 CFALAGMYYNMKDKE----NAIMIYDKGCKLGMKQACENL 349
C L +YY+ +D E A Y K C L C NL
Sbjct: 63 CKRLGSLYYHGRDVEKNLTKAAYFYSKACDLNNGGGCGNL 102
>ref|NP_223289.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71914 hypothetical protein jhp0571 - Helicobacter pylori (strain J99)
gb|AAD06154.1| (AE001490) putative [Helicobacter pylori J99]
Length = 352
Score = 129 bits (323), Expect = 7e-29
Identities = 88/282 (31%), Positives = 123/282 (43%), Gaps = 18/282 (6%)
Query: 19 NAHLWGKQDNSFL----GVAEKAY----------KSGNYSKATSYFKKACNDGVSEGCTQ 64
N + K DNS L G E A K G+Y A F ++C++G + GC
Sbjct: 45 NTQITPKNDNSNLLDKLGSPENAQTELSAGIDLAKKGDYQGAFKLFSQSCDNGNAAGCFA 104
Query: 65 LGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQE-AIDAYA 123
+G +Y NG G + + KA YY+ C D C L +Y+ N +E A+ YA
Sbjct: 105 VGAMYANGVGIQTNRLKAARYYEMGCSGGDATACANLAQMYENKKNADSNDKENALQLYA 164
Query: 124 KACVLKHPESCYNLGIIYDRKIKGNAD--QAVTYYQKSCNFDMAKGCYVLGVAYE-KGFL 180
AC +C NLG ++ D +A++YY+ SC GCY LG+
Sbjct: 165 VACQGGDMLACNNLGWMFANGSGVPKDYYKAMSYYKFSCENGNDMGCYNLGLMSNVNNIY 224
Query: 181 EVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSG 240
+ ++ V AC D C LG ++ NGD G + A Y Q AC G
Sbjct: 225 GIDKAQLSQVDLNYLACNAGDMMGCANLGWIYANGDLGAPLNNHYAAKYFQMACDGGILG 284
Query: 241 GCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMG 282
C +LG +Y G V +D Q+A + F ACD G SC G
Sbjct: 285 SCNNLGVLYQKGLGVPQDDQRALDLFSYACDNGFESSCRNYG 326
Score = 110 bits (274), Expect = 3e-23
Identities = 71/242 (29%), Positives = 111/242 (45%), Gaps = 6/242 (2%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNL 137
DY+ A + + +C + GCF +G +Y G+G N +A Y C +C NL
Sbjct: 82 DYQGAFKLFSQSCDNGNAAGCFAVGAMYANGVGIQTNRLKAARYYEMGCSGGDATACANL 141
Query: 138 GIIYDRKIKGNA---DQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYL 194
+Y+ K ++ + A+ Y +C C LG + G V + +KA+ YY
Sbjct: 142 AQMYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGS-GVPKDYYKAMSYYK 200
Query: 195 KACRLDDGQACRALGSLFE-NGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR 253
+C + C LG + N G+D+ D AC + GCA+LG +Y G
Sbjct: 201 FSCENGNDMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGCANLGWIYANGD 260
Query: 254 Y-VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEV 312
+ A +F+ ACD G SC+ +G +Y +G VP+D ++ALD + CD G E
Sbjct: 261 LGAPLNNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGVPQDDQRALDLFSYACDNGFES 320
Query: 313 GC 314
C
Sbjct: 321 SC 322
Score = 90.1 bits (222), Expect = 3e-17
Identities = 59/211 (27%), Positives = 93/211 (43%), Gaps = 8/211 (3%)
Query: 146 KGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQAC 205
KG+ A + +SC+ A GC+ +G Y G + ++ + KA YY C D AC
Sbjct: 80 KGDYQGAFKLFSQSCDNGNAAGCFAVGAMYANG-VGIQTNRLKAARYYEMGCSGGDATAC 138
Query: 206 RALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNF 265
L ++EN D E A AC + C +LG M+ G V KD KA ++
Sbjct: 139 ANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVPKDYYKAMSY 198
Query: 266 FKQACDMGSAVSCSRMGFMYSQGD--AVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN 323
+K +C+ G+ + C +G M + + + K +D C+ GD +GC L +Y N
Sbjct: 199 YKFSCENGNDMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGCANLGWIYAN 258
Query: 324 -----MKDKENAIMIYDKGCKLGMKQACENL 349
+ A + C G+ +C NL
Sbjct: 259 GDLGAPLNNHYAAKYFQMACDGGILGSCNNL 289
Score = 50.1 bits (118), Expect = 4e-05
Identities = 23/74 (31%), Positives = 34/74 (45%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
N A YF+ AC+ G+ C LG++Y+ G G D ++AL+ + AC C
Sbjct: 266 NNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGVPQDDQRALDLFSYACDNGFESSCRNY 325
Query: 102 GGLYDEGLGTTQNY 115
G + L NY
Sbjct: 326 GNFKEHLLHVNPNY 339
Score = 42.7 bits (99), Expect = 0.006
Identities = 21/63 (33%), Positives = 31/63 (48%), Gaps = 4/63 (6%)
Query: 294 DLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENL 349
D + A + + CD G+ GCFA+ MY N ++ A Y+ GC G AC NL
Sbjct: 82 DYQGAFKLFSQSCDNGNAAGCFAVGAMYANGVGIQTNRLKAARYYEMGCSGGDATACANL 141
Query: 350 TKL 352
++
Sbjct: 142 AQM 144
>gb|AAM66148.1|AF326627_1 (AF326627) JHP1437-like protein [Helicobacter pylori]
Length = 253
Score = 124 bits (311), Expect = 2e-27
Identities = 75/228 (32%), Positives = 124/228 (53%), Gaps = 19/228 (8%)
Query: 130 HPESCYNLGI-IYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLE--VKQSN 186
+P+ LGI IY K + +A Y++K+C A GC +L AY K L+ ++S
Sbjct: 28 NPKELIFLGITIYTDK---DFTRAKEYFEKACELHDADGCAILREAYSKVILKGSARESI 84
Query: 187 HKAVIYYL--KACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCAS 244
KA+ + KAC+ +D + C+ L + N + D + A +Y K+C LNN GC
Sbjct: 85 EKALEHTATAKACKSNDAEKCKDLAEFYFNAN-----DLKNALEYYSKSCKLNNVEGCML 139
Query: 245 LGSMYM-LGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYE 303
+ Y + + +KKD +K ++ +AC++ A++C+ +G Y G+ V KDL+KA +
Sbjct: 140 SATFYNDMIKGLKKD-KKDLEYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSA 198
Query: 304 RGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACE 347
+ C++ D GC+ALA Y KD++ +K CKLG+K+AC+
Sbjct: 199 KACELNDAKGCYALAAFYNEGKGVAKDEKQTTENLEKSCKLGLKEACD 246
Score = 110 bits (275), Expect = 2e-23
Identities = 61/206 (29%), Positives = 109/206 (52%), Gaps = 9/206 (4%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGL---GTTQNYQEAID--AYAKACVLKHPE 132
D+ +A EY++ AC+ D +GC L Y + + ++ ++A++ A AKAC E
Sbjct: 44 DFTRAKEYFEKACELHDADGCAILREAYSKVILKGSARESIEKALEHTATAKACKSNDAE 103
Query: 133 SCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIY 192
C +L Y + A+ YY KSC + +GC +L + ++ + + K + Y
Sbjct: 104 KCKDLAEFYFN--ANDLKNALEYYSKSCKLNNVEGC-MLSATFYNDMIKGLKKDKKDLEY 160
Query: 193 YLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLG 252
Y KAC L++ C +G + +G+ G+ +D + AF+Y KAC LN++ GC +L + Y G
Sbjct: 161 YSKACELNEALTCTLVGEFYRDGE-GVTKDLKKAFEYSAKACELNDAKGCYALAAFYNEG 219
Query: 253 RYVKKDPQKAFNFFKQACDMGSAVSC 278
+ V KD ++ +++C +G +C
Sbjct: 220 KGVAKDEKQTTENLEKSCKLGLKEAC 245
Score = 96.7 bits (239), Expect = 4e-19
Identities = 60/211 (28%), Positives = 102/211 (47%), Gaps = 13/211 (6%)
Query: 111 TTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKI-KGNADQAV------TYYQKSCNFD 163
T +++ A + + KAC L + C L Y + I KG+A +++ T K+C +
Sbjct: 41 TDKDFTRAKEYFEKACELHDADGCAILREAYSKVILKGSARESIEKALEHTATAKACKSN 100
Query: 164 MAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDF 223
A+ C L Y A+ YY K+C+L++ + C + + + GL +D
Sbjct: 101 DAEKCKDLAEFYFNA-----NDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKD- 154
Query: 224 EVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGF 283
+ +Y KAC LN + C +G Y G V KD +KAF + +AC++ A C +
Sbjct: 155 KKDLEYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYALAA 214
Query: 284 MYSQGDAVPKDLRKALDNYERGCDMGDEVGC 314
Y++G V KD ++ +N E+ C +G + C
Sbjct: 215 FYNEGKGVAKDEKQTTENLEKSCKLGLKEAC 245
Score = 94.7 bits (234), Expect = 1e-18
Identities = 67/220 (30%), Positives = 105/220 (47%), Gaps = 15/220 (6%)
Query: 30 FLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYEN---GQGTRIDYKKALEYY 86
FLG+ Y ++++A YF+KAC ++GC L Y R +KALE+
Sbjct: 34 FLGIT--IYTDKDFTRAKEYFEKACELHDADGCAILREAYSKVILKGSARESIEKALEHT 91
Query: 87 KT--ACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRK 144
T AC+++D E C L Y + + A++ Y+K+C L + E C Y+
Sbjct: 92 ATAKACKSNDAEKCKDLAEFY----FNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDM 147
Query: 145 IKG--NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDG 202
IKG + + YY K+C + A C ++G Y G V + KA Y KAC L+D
Sbjct: 148 IKGLKKDKKDLEYYSKACELNEALTCTLVGEFYRDG-EGVTKDLKKAFEYSAKACELNDA 206
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
+ C AL + + G G+ +D + + L+K+C L C
Sbjct: 207 KGCYALAAFYNEG-KGVAKDEKQTTENLEKSCKLGLKEAC 245
>gb|AAM66151.1|AF326630_1 (AF326630) JHP1437-like protein [Helicobacter pylori]
Length = 255
Score = 121 bits (304), Expect = 1e-26
Identities = 68/208 (32%), Positives = 115/208 (54%), Gaps = 15/208 (7%)
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLE--VKQSNHKAVIYYL--KACRLDDGQACR 206
+A Y++K+C + A GC +L AY K L+ ++S KA+ + KAC+ +D + C+
Sbjct: 49 RAKEYFEKACKLNDADGCTILREAYSKVILKGSARESIEKALEHTATAKACKSNDAEKCK 108
Query: 207 ALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYM-LGRYVKKDPQKAFNF 265
L + N + D + A +Y K+C LNN GC + Y + + +KKD +K +
Sbjct: 109 DLAEFYFNAN-----DLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKD-KKDLEY 162
Query: 266 FKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN-- 323
+ +AC++ A++C+ +G Y G+ V KDL+KA + + C++ D GC+ALA Y
Sbjct: 163 YSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYALAAFYNEGK 222
Query: 324 --MKDKENAIMIYDKGCKLGMKQACENL 349
K ++ +K CKLG+K+AC+ L
Sbjct: 223 GVAKGEKQTTENLEKSCKLGLKEACDIL 250
Score = 94.4 bits (233), Expect = 2e-18
Identities = 59/211 (27%), Positives = 101/211 (46%), Gaps = 13/211 (6%)
Query: 111 TTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKI-KGNADQAV------TYYQKSCNFD 163
T +++ A + + KAC L + C L Y + I KG+A +++ T K+C +
Sbjct: 43 TDKDFTRAKEYFEKACKLNDADGCTILREAYSKVILKGSARESIEKALEHTATAKACKSN 102
Query: 164 MAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDF 223
A+ C L Y A+ YY K+C+L++ + C + + + GL +D
Sbjct: 103 DAEKCKDLAEFYFNA-----NDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKD- 156
Query: 224 EVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGF 283
+ +Y KAC LN + C +G Y G V KD +KAF + +AC++ A C +
Sbjct: 157 KKDLEYYSKACELNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYALAA 216
Query: 284 MYSQGDAVPKDLRKALDNYERGCDMGDEVGC 314
Y++G V K ++ +N E+ C +G + C
Sbjct: 217 FYNEGKGVAKGEKQTTENLEKSCKLGLKEAC 247
Score = 92.8 bits (229), Expect = 5e-18
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 13/212 (6%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYEN---GQGTRIDYKKALEYYKT--ACQA 92
Y ++++A YF+KAC ++GCT L Y R +KALE+ T AC++
Sbjct: 42 YTDKDFTRAKEYFEKACKLNDADGCTILREAYSKVILKGSARESIEKALEHTATAKACKS 101
Query: 93 DDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKG--NAD 150
+D E C L Y + + A++ Y+K+C L + E C Y+ IKG
Sbjct: 102 NDAEKCKDLAEFY----FNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKDK 157
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS 210
+ + YY K+C + A C ++G Y G V + KA Y KAC L+D + C AL +
Sbjct: 158 KDLEYYSKACELNEALTCTLVGEFYRDG-EGVTKDLKKAFEYSAKACELNDAKGCYALAA 216
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
+ G G+ + + + L+K+C L C
Sbjct: 217 FYNEG-KGVAKGEKQTTENLEKSCKLGLKEAC 247
Score = 72.8 bits (177), Expect = 6e-12
Identities = 42/142 (29%), Positives = 69/142 (48%), Gaps = 4/142 (2%)
Query: 33 VAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENG-QGTRIDYKKALEYYKTACQ 91
+AE + + + A Y+ K+C EGC Y + +G + D KK LEYY AC+
Sbjct: 110 LAEFYFNANDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKD-KKDLEYYSKACE 168
Query: 92 ADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNA 149
++ C +G Y +G G T++ ++A + AKAC L + CY L Y+ + +
Sbjct: 169 LNEALTCTLVGEFYRDGEGVTKDLKKAFEYSAKACELNDAKGCYALAAFYNEGKGVAKGE 228
Query: 150 DQAVTYYQKSCNFDMAKGCYVL 171
Q +KSC + + C +L
Sbjct: 229 KQTTENLEKSCKLGLKEACDIL 250
Score = 53.5 bits (127), Expect = 4e-06
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQ---GDAVPKDLRKALDN--YERGCDM 308
Y KD +A +F++AC + A C+ + YS+ + + + KAL++ + C
Sbjct: 42 YTDKDFTRAKEYFEKACKLNDADGCTILREAYSKVILKGSARESIEKALEHTATAKACKS 101
Query: 309 GDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQAC 346
D C LA Y+N D +NA+ Y K CKL + C
Sbjct: 102 NDAEKCKDLAEFYFNANDLKNALEYYSKSCKLNNVEGC 139
>ref|NP_586349.1| (NC_003237) similarity to SKT5 PROTEIN [Encephalitozoon cuniculi]
emb|CAD25953.1| (AL590450) similarity to SKT5 PROTEIN [Encephalitozoon cuniculi]
Length = 590
Score = 121 bits (303), Expect = 1e-26
Identities = 83/314 (26%), Positives = 145/314 (45%), Gaps = 8/314 (2%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
N A FK A S +G YE G+G + KA E Y+ + + ++ L
Sbjct: 188 NEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYRLSAKMENSYAQNAL 247
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKI--KGNADQAVTYYQKS 159
G Y+EG G ++ Q+A + Y K+ + +P NL Y + I + N ++A +Y+++
Sbjct: 248 GNCYEEGKGVDRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGTERNLEKAFEWYKRA 307
Query: 160 CNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGL 219
+++ + +G Y+ G L AV +Y ++ D+ + ALG +++G G+
Sbjct: 308 AIQGLSRAKHNIGYCYQNG-LGTSPCMRSAVNWYKESAAEDNKYSIHALGVCYQHG-YGV 365
Query: 220 DEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCS 279
+D +A Y + SL Y G V+ P+K+F K+A +M ++ + +
Sbjct: 366 PKDERLAVRYFSEGVRAGFDEAIISLALCYRSGIGVRISPEKSFALMKRAAEMNNSSAQN 425
Query: 280 RMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYD 335
+G+ Y +G PK+LRKA+ YE + F L+ +Y N DKE I +
Sbjct: 426 TLGYYYEEGYGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGNHVPADKELGIRLLI 485
Query: 336 KGCKLGMKQACENL 349
+ LG +A L
Sbjct: 486 RSRDLGNPRAMNTL 499
Score = 103 bits (256), Expect = 4e-21
Identities = 81/343 (23%), Positives = 148/343 (42%), Gaps = 14/343 (4%)
Query: 22 LWGKQDNSFLGVA-EKAYKSG-----NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGT 75
L K +NS+ A Y+ G + KA +KK+ G G L Y+ G GT
Sbjct: 234 LSAKMENSYAQNALGNCYEEGKGVDRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGT 293
Query: 76 RIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCY 135
+ +KA E+YK A +G Y GLGT+ + A++ Y ++ + S +
Sbjct: 294 ERNLEKAFEWYKRAAIQGLSRAKHNIGYCYQNGLGTSPCMRSAVNWYKESAAEDNKYSIH 353
Query: 136 NLGIIYDRKIKGNADQ--AVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYY 193
LG+ Y D+ AV Y+ + + L + Y G + V+ S K+
Sbjct: 354 ALGVCYQHGYGVPKDERLAVRYFSEGVRAGFDEAIISLALCYRSG-IGVRISPEKSFALM 412
Query: 194 LKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR 253
+A +++ A LG +E G G ++ A + + + NNS +L ++Y+ G
Sbjct: 413 KRAAEMNNSSAQNTLGYYYEEG-YGTPKNLRKAVKWYETSAKRNNSWALFNLSTLYLNGN 471
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVG 313
+V D + ++ D+G+ + + +G+ + +G V KD R A ++Y + G
Sbjct: 472 HVPADKELGIRLLIRSRDLGNPRAMNTLGYCFEKGIVVGKDPRLAFEHYTQALMNGYSKA 531
Query: 314 CFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENLTKL 352
++L Y + D + A+ + K G + + + L K+
Sbjct: 532 GYSLGRCYESGIGTEVDLDKALYYFYKASSAGEEASLQRLKKI 574
Score = 81.6 bits (200), Expect = 1e-14
Identities = 65/259 (25%), Positives = 111/259 (42%), Gaps = 4/259 (1%)
Query: 65 LGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAK 124
LG+ Y+ G G +D A++YY + LG + +G G +N + A++ +
Sbjct: 139 LGVCYQEGYGVPVDPLLAVKYYSEGAYEGNTCSIGILGYCFLKGFGVERNEEIAVELFKY 198
Query: 125 ACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEV 182
A K + YN+G Y+ R ++ N +A Y+ S + + LG YE+G V
Sbjct: 199 ASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYRLSAKMENSYAQNALGNCYEEG-KGV 257
Query: 183 KQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
+ KA Y K+ L ++ G G + + E AF++ ++A S
Sbjct: 258 DRDLQKAFELYKKSALQGYPSGQCNLAFCYQKG-IGTERNLEKAFEWYKRAAIQGLSRAK 316
Query: 243 ASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNY 302
++G Y G + A N++K++ + S +G Y G VPKD R A+ +
Sbjct: 317 HNIGYCYQNGLGTSPCMRSAVNWYKESAAEDNKYSIHALGVCYQHGYGVPKDERLAVRYF 376
Query: 303 ERGCDMGDEVGCFALAGMY 321
G G + +LA Y
Sbjct: 377 SEGVRAGFDEAIISLALCY 395
Score = 63.9 bits (154), Expect = 3e-09
Identities = 63/266 (23%), Positives = 114/266 (42%), Gaps = 23/266 (8%)
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII-----------------YDRKIKG 147
Y+ G+GT+ + ++A Y KA + + + L I Y K+K
Sbjct: 56 YEFGIGTSVDMKKAEMRYTKAALSDNGLALIRLAFIRRFGRPTATIDRREAKRYLDKLKR 115
Query: 148 NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRA 207
+ V + + Y LGV Y++G+ V AV YY + + +
Sbjct: 116 LGRRGVEWLVYANKHGNLYARYCLGVCYQEGY-GVPVDPLLAVKYYSEGAYEGNTCSIGI 174
Query: 208 LGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFK 267
LG F G G++ + E+A + + A +S ++G Y GR V+++ KAF ++
Sbjct: 175 LGYCFLKG-FGVERNEEIAVELFKYASEKKDSTALYNIGFCYEEGRGVERNLIKAFEMYR 233
Query: 268 QACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYY----N 323
+ M ++ + + +G Y +G V +DL+KA + Y++ G G LA Y
Sbjct: 234 LSAKMENSYAQNALGNCYEEGKGVDRDLQKAFELYKKSALQGYPSGQCNLAFCYQKGIGT 293
Query: 324 MKDKENAIMIYDKGCKLGMKQACENL 349
++ E A Y + G+ +A N+
Sbjct: 294 ERNLEKAFEWYKRAAIQGLSRAKHNI 319
>gb|AAL47058.1|AF326608_1 (AF326608) JHP318-like protein [Helicobacter pylori]
Length = 215
Score = 121 bits (303), Expect = 1e-26
Identities = 63/171 (36%), Positives = 96/171 (55%), Gaps = 5/171 (2%)
Query: 183 KQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
KQ KA Y+ +AC L++G+ C LG L+ +G G++++ A + KAC L + GGC
Sbjct: 43 KQDFSKARKYFERACGLNNGRGCNNLGVLYRDGQ-GVEKNLTKAAQFYSKACELKDGGGC 101
Query: 243 ASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNY 302
+LG +Y G V+K+ KA F+ +AC++ C +G +Y +G+ V K+L KA Y
Sbjct: 102 GNLGVLYQKGEVVEKNLTKAAQFYSKACELKDGGGCGNLGVLYQKGEVVEKNLTKAAYLY 161
Query: 303 ERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENL 349
+ C++ + GC ALA +Y N KD A K CKLG ++A E L
Sbjct: 162 SKACELKESFGCGALAVLYINGQGVEKDLTKADQYISKACKLGDQEARETL 212
Score = 117 bits (294), Expect = 2e-25
Identities = 64/174 (36%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
Query: 37 AYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDRE 96
+Y ++SKA YF++AC GC LG++Y +GQG + KA ++Y AC+ D
Sbjct: 40 SYDKQDFSKARKYFERACGLNNGRGCNNLGVLYRDGQGVEKNLTKAAQFYSKACELKDGG 99
Query: 97 GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDR--KIKGNADQAVT 154
GC LG LY +G +N +A Y+KAC LK C NLG++Y + ++ N +A
Sbjct: 100 GCGNLGVLYQKGEVVEKNLTKAAQFYSKACELKDGGGCGNLGVLYQKGEVVEKNLTKAAY 159
Query: 155 YYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRAL 208
Y K+C + GC L V Y G V++ KA Y KAC+L D +A L
Sbjct: 160 LYSKACELKESFGCGALAVLYING-QGVEKDLTKADQYISKACKLGDQEARETL 212
Score = 116 bits (291), Expect = 3e-25
Identities = 61/183 (33%), Positives = 102/183 (55%), Gaps = 6/183 (3%)
Query: 130 HPESCYNLGII-YDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHK 188
+PE +LG++ YD++ + +A Y++++C + +GC LGV Y G V+++ K
Sbjct: 29 NPEELVDLGMLSYDKQ---DFSKARKYFERACGLNNGRGCNNLGVLYRDG-QGVEKNLTK 84
Query: 189 AVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSM 248
A +Y KAC L DG C LG L++ G+ ++++ A + KAC L + GGC +LG +
Sbjct: 85 AAQFYSKACELKDGGGCGNLGVLYQKGEV-VEKNLTKAAQFYSKACELKDGGGCGNLGVL 143
Query: 249 YMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDM 308
Y G V+K+ KA + +AC++ + C + +Y G V KDL KA + C +
Sbjct: 144 YQKGEVVEKNLTKAAYLYSKACELKESFGCGALAVLYINGQGVEKDLTKADQYISKACKL 203
Query: 309 GDE 311
GD+
Sbjct: 204 GDQ 206
Score = 63.2 bits (152), Expect = 5e-09
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 4/100 (4%)
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVG 313
Y K+D KA +F++AC + + C+ +G +Y G V K+L KA Y + C++ D G
Sbjct: 41 YDKQDFSKARKYFERACGLNNGRGCNNLGVLYRDGQGVEKNLTKAAQFYSKACELKDGGG 100
Query: 314 CFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENL 349
C L +Y K+ A Y K C+L C NL
Sbjct: 101 CGNLGVLYQKGEVVEKNLTKAAQFYSKACELKDGGGCGNL 140
>ref|NP_223762.1| (NC_000921) putative [Helicobacter pylori J99]
pir||G71856 hypothetical protein jhp1045 - Helicobacter pylori (strain J99)
gb|AAD06623.1| (AE001532) putative [Helicobacter pylori J99]
Length = 256
Score = 118 bits (295), Expect = 1e-25
Identities = 75/241 (31%), Positives = 124/241 (51%), Gaps = 5/241 (2%)
Query: 6 LKILVCGLFFWSLNAHLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQL 65
LKI + GL +S +Q +++ E+AY + Y +A S++K A +G S L
Sbjct: 9 LKICLVGLCLFSTLGAEHLEQKGNYIYKGEEAYNNKEYERAASFYKSAIKNGESLAYILL 68
Query: 66 GIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKA 125
GI+YENG+G DYKKA+EY++ A D G LG +Y EG G ++ ++A++ + A
Sbjct: 69 GIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIA 128
Query: 126 CVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKG--FLE 181
+ + NLGI+Y R + N +A ++K+ + + +LG Y G L
Sbjct: 129 TEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRKAMHKGNVEAYILLGDIYYSGNDQLG 188
Query: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGG 241
++ KAV+YY A + +A L + G G+++D + A +Y+QKAC +
Sbjct: 189 IEPDKDKAVVYYKMAADVSSSRAYEGLSESYRYG-LGVEKDKKKAEEYMQKACDFDIDKN 247
Query: 242 C 242
C
Sbjct: 248 C 248
Score = 80.1 bits (196), Expect = 4e-14
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 188 KAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGS 247
+A +Y A + + A LG ++ENG G+ +D++ A +Y QKA + G +LG
Sbjct: 48 RAASFYKSAIKNGESLAYILLGIMYENG-RGVPKDYKKAVEYFQKAVDNDIPRGYNNLGV 106
Query: 248 MYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
MY G+ V KD +KA +F+ A + G + +G MY +G VP + KA + + +
Sbjct: 107 MYKEGKGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYAKATECFRKAMH 166
Query: 308 MGDEVGCFALAGMYYN-------MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
G+ L +YY+ DK+ A++ Y + +A E L++ Y
Sbjct: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAVVYYKMAADVSSSRAYEGLSESYRY 221
Score = 71.2 bits (173), Expect = 2e-11
Identities = 60/209 (28%), Positives = 99/209 (46%), Gaps = 11/209 (5%)
Query: 113 QNYQEAIDAYAKACVLKHPESCYN--LGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGC 168
+ Y+ A Y A +K+ ES LGI+Y+ R + + +AV Y+QK+ + D+ +G
Sbjct: 44 KEYERAASFYKSA--IKNGESLAYILLGIMYENGRGVPKDYKKAVEYFQKAVDNDIPRGY 101
Query: 169 YVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFD 228
LGV Y++G V + KAV Y+ A A LG ++ G G+ ++ A +
Sbjct: 102 NNLGVMYKEG-KGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYAKATE 159
Query: 229 YLQKACGLNNSGGCASLGSMYMLGRY---VKKDPQKAFNFFKQACDMGSAVSCSRMGFMY 285
+KA N LG +Y G ++ D KA ++K A D+ S+ + + Y
Sbjct: 160 CFRKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAVVYYKMAADVSSSRAYEGLSESY 219
Query: 286 SQGDAVPKDLRKALDNYERGCDMGDEVGC 314
G V KD +KA + ++ CD + C
Sbjct: 220 RYGLGVEKDKKKAEEYMQKACDFDIDKNC 248
Score = 53.9 bits (128), Expect = 3e-06
Identities = 33/111 (29%), Positives = 55/111 (48%)
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
+++ +A ++++E A + + A S LG MY GR V KD +KA +F++A
Sbjct: 34 IYKGEEAYNNKEYERAASFYKSAIKNGESLAYILLGIMYENGRGVPKDYKKAVEYFQKAV 93
Query: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
D + +G MY +G VPKD +KA++ + + G L MY
Sbjct: 94 DNDIPRGYNNLGVMYKEGKGVPKDEKKAVEYFRIATEKGYTNAYINLGIMY 144
>ref|NP_224155.1| (NC_000921) putative [Helicobacter pylori J99]
pir||E71807 hypothetical protein jhp1437 - Helicobacter pylori (strain J99)
gb|AAD07008.1| (AE001566) putative [Helicobacter pylori J99]
Length = 256
Score = 116 bits (291), Expect = 3e-25
Identities = 65/213 (30%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 148 NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYL------KACRLDD 201
N +A Y++K+C + A GC +L Y G +++ +++ L K C+L+D
Sbjct: 45 NFTRAKKYFEKACKSNDADGCAILREVYSSGKAIARENARESIEKALEHTATAKVCKLND 104
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYM-LGRYVKKDPQ 260
+ C+ L + N + D + A +Y K+C LNN GC + Y + + +KKD +
Sbjct: 105 AEKCKDLAEFYFNVN-----DLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKD-K 158
Query: 261 KAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGM 320
K ++ +AC++ + CS++G Y G+ V KD +KA + + C++ D GC+ALA
Sbjct: 159 KDLEYYSKACELNNGGGCSKLGGDYFFGEGVTKDFKKAFEYSAKACELNDAKGCYALAAF 218
Query: 321 YYN----MKDKENAIMIYDKGCKLGMKQACENL 349
Y KD++ +K CKLG+K+AC+ L
Sbjct: 219 YNEGKGVAKDEKQTTENLEKSCKLGLKEACDIL 251
Score = 108 bits (270), Expect = 9e-23
Identities = 69/244 (28%), Positives = 111/244 (45%), Gaps = 47/244 (19%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTT-QNYQEAID------AYAKACVLKH 130
++ +A +Y++ AC+++D +GC L +Y G +N +E+I+ A AK C L
Sbjct: 45 NFTRAKKYFEKACKSNDADGCAILREVYSSGKAIARENARESIEKALEHTATAKVCKLND 104
Query: 131 PESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAV 190
E C +L Y V K LE
Sbjct: 105 AEKCKDLAEFY-----------------------------FNVNDLKNALE--------- 126
Query: 191 IYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYM 250
YY K+C+L++ + C + + + GL +D + +Y KAC LNN GGC+ LG Y
Sbjct: 127 -YYSKSCKLNNVEGCMLSATFYNDMIKGLKKD-KKDLEYYSKACELNNGGGCSKLGGDYF 184
Query: 251 LGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGD 310
G V KD +KAF + +AC++ A C + Y++G V KD ++ +N E+ C +G
Sbjct: 185 FGEGVTKDFKKAFEYSAKACELNDAKGCYALAAFYNEGKGVAKDEKQTTENLEKSCKLGL 244
Query: 311 EVGC 314
+ C
Sbjct: 245 KEAC 248
Score = 101 bits (251), Expect = 1e-20
Identities = 67/214 (31%), Positives = 103/214 (47%), Gaps = 15/214 (7%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENG-----QGTRIDYKKALEYYKTA--C 90
Y N+++A YF+KAC ++GC L +Y +G + R +KALE+ TA C
Sbjct: 41 YTDKNFTRAKKYFEKACKSNDADGCAILREVYSSGKAIARENARESIEKALEHTATAKVC 100
Query: 91 QADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKG--N 148
+ +D E C L Y + + A++ Y+K+C L + E C Y+ IKG
Sbjct: 101 KLNDAEKCKDLAEFY----FNVNDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKK 156
Query: 149 ADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRAL 208
+ + YY K+C + GC LG Y G V + KA Y KAC L+D + C AL
Sbjct: 157 DKKDLEYYSKACELNNGGGCSKLGGDYFFG-EGVTKDFKKAFEYSAKACELNDAKGCYAL 215
Query: 209 GSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
+ + G G+ +D + + L+K+C L C
Sbjct: 216 AAFYNEG-KGVAKDEKQTTENLEKSCKLGLKEAC 248
Score = 77.4 bits (189), Expect = 2e-13
Identities = 45/142 (31%), Positives = 71/142 (49%), Gaps = 4/142 (2%)
Query: 33 VAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENG-QGTRIDYKKALEYYKTACQ 91
+AE + + A Y+ K+C EGC Y + +G + D KK LEYY AC+
Sbjct: 111 LAEFYFNVNDLKNALEYYSKSCKLNNVEGCMLSATFYNDMIKGLKKD-KKDLEYYSKACE 169
Query: 92 ADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNA 149
++ GC LGG Y G G T+++++A + AKAC L + CY L Y+ + + +
Sbjct: 170 LNNGGGCSKLGGDYFFGEGVTKDFKKAFEYSAKACELNDAKGCYALAAFYNEGKGVAKDE 229
Query: 150 DQAVTYYQKSCNFDMAKGCYVL 171
Q +KSC + + C +L
Sbjct: 230 KQTTENLEKSCKLGLKEACDIL 251
Score = 57.8 bits (138), Expect = 2e-07
Identities = 31/100 (31%), Positives = 52/100 (52%), Gaps = 7/100 (7%)
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKD-----LRKALDN--YERGC 306
Y K+ +A +F++AC A C+ + +YS G A+ ++ + KAL++ + C
Sbjct: 41 YTDKNFTRAKKYFEKACKSNDADGCAILREVYSSGKAIARENARESIEKALEHTATAKVC 100
Query: 307 DMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQAC 346
+ D C LA Y+N+ D +NA+ Y K CKL + C
Sbjct: 101 KLNDAEKCKDLAEFYFNVNDLKNALEYYSKSCKLNNVEGC 140
>gb|AAB47276.1| (U86608) 29 kDa protein [Helicobacter pylori]
Length = 256
Score = 113 bits (283), Expect = 3e-24
Identities = 72/241 (29%), Positives = 121/241 (49%), Gaps = 5/241 (2%)
Query: 6 LKILVCGLFFWSLNAHLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQL 65
LKI + L +S +Q +++ E+AY + Y +A S++K A +G L
Sbjct: 9 LKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLL 68
Query: 66 GIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKA 125
GI+YENG+G DYKKA EY++ A D G LG +Y EG G ++ ++A++ + A
Sbjct: 69 GIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIA 128
Query: 126 CVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKG--FLE 181
+ + NLGI+Y R + N +A ++K+ + + +LG Y G L
Sbjct: 129 TEKGYANAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLG 188
Query: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGG 241
++ KA++YY A + +A L + G G+++D + A +Y+QKAC +
Sbjct: 189 IEPDKDKAIVYYKMAADMSSSRAYEGLAESYRYG-LGVEKDKKKAEEYMQKACDFDIDKN 247
Query: 242 C 242
C
Sbjct: 248 C 248
Score = 81.3 bits (199), Expect = 2e-14
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 8/175 (4%)
Query: 188 KAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGS 247
+A +Y A + + A LG ++ENG G+ +D++ A +Y QKA + G +LG
Sbjct: 48 RAASFYKSAIKNGEPLAYVLLGIMYENG-RGVPKDYKKAAEYFQKAVDNDIPRGYNNLGV 106
Query: 248 MYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
MY GR V KD +KA +F+ A + G A + +G MY +G VP + KA + + +
Sbjct: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
Query: 308 MGDEVGCFALAGMYYN-------MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
G+ L +YY+ DK+ AI+ Y + +A E L + Y
Sbjct: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYRY 221
Score = 74.7 bits (182), Expect = 1e-12
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYV 170
+ Y+ A Y A P + LGI+Y+ R + + +A Y+QK+ + D+ +G
Sbjct: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAVDNDIPRGYNN 103
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
LGV Y++G V + KAV Y+ A A LG ++ G G+ ++ A +
Sbjct: 104 LGVMYKEG-RGVPKDEKKAVEYFRIATEKGYANAYINLGIMYMEG-RGVPSNYVKATECF 161
Query: 231 QKACGLNNSGGCASLGSMYMLGRY---VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQ 287
+KA N LG +Y G ++ D KA ++K A DM S+ + + Y
Sbjct: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYRY 221
Query: 288 GDAVPKDLRKALDNYERGCDMGDEVGC 314
G V KD +KA + ++ CD + C
Sbjct: 222 GLGVEKDKKKAEEYMQKACDFDIDKNC 248
Score = 51.6 bits (122), Expect = 1e-05
Identities = 32/111 (28%), Positives = 54/111 (47%)
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
+++ +A ++++E A + + A LG MY GR V KD +KA +F++A
Sbjct: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDYKKAAEYFQKAV 93
Query: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
D + +G MY +G VPKD +KA++ + + G L MY
Sbjct: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYANAYINLGIMY 144
>ref|NP_207908.1| (NC_000915) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
pir||E64659 conserved hypothetical secreted protein HP1117 - Helicobacter
pylori (strain 26695)
gb|AAD08161.1| (AE000618) conserved hypothetical secreted protein [Helicobacter
pylori 26695]
Length = 256
Score = 110 bits (276), Expect = 2e-23
Identities = 71/241 (29%), Positives = 121/241 (49%), Gaps = 5/241 (2%)
Query: 6 LKILVCGLFFWSLNAHLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQL 65
LKI + L +S +Q +++ E+AY + Y +A S++K A +G L
Sbjct: 9 LKICLASLCLFSALGAEHLEQKRNYIYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLL 68
Query: 66 GIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKA 125
GI+YENG+G D KKA EY++ A D G LG +Y EG G ++ ++A++ + A
Sbjct: 69 GIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIA 128
Query: 126 CVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKG--FLE 181
+ + NLGI+Y R + N +A ++K+ + + +LG Y G L
Sbjct: 129 TEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMHKGNVEAYILLGDIYYSGNDQLG 188
Query: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGG 241
++ KA++YY A + +A L ++ G G+++D + A +Y+QKAC +
Sbjct: 189 IEPDKDKAIVYYKMAADMSSSRAYEGLAESYQYG-LGVEKDKKKAEEYMQKACDFDIDKN 247
Query: 242 C 242
C
Sbjct: 248 C 248
Score = 77.4 bits (189), Expect = 2e-13
Identities = 52/175 (29%), Positives = 83/175 (46%), Gaps = 8/175 (4%)
Query: 188 KAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGS 247
+A +Y A + + A LG ++ENG G+ +D + A +Y QKA + G +LG
Sbjct: 48 RAASFYKSAIKNGEPLAYVLLGIMYENG-RGVPKDEKKAAEYFQKAVDNDIPRGYNNLGV 106
Query: 248 MYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
MY GR V KD +KA +F+ A + G + +G MY +G VP + KA + + +
Sbjct: 107 MYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEGRGVPSNYVKATECFRKAMH 166
Query: 308 MGDEVGCFALAGMYYN-------MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
G+ L +YY+ DK+ AI+ Y + +A E L + Y
Sbjct: 167 KGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQY 221
Score = 74.7 bits (182), Expect = 1e-12
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 7/207 (3%)
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYV 170
+ Y+ A Y A P + LGI+Y+ R + + +A Y+QK+ + D+ +G
Sbjct: 44 KEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAVDNDIPRGYNN 103
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
LGV Y++G V + KAV Y+ A A LG ++ G G+ ++ A +
Sbjct: 104 LGVMYKEG-RGVPKDEKKAVEYFRIATEKGYTNAYINLGIMYMEG-RGVPSNYVKATECF 161
Query: 231 QKACGLNNSGGCASLGSMYMLGRY---VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQ 287
+KA N LG +Y G ++ D KA ++K A DM S+ + + Y
Sbjct: 162 RKAMHKGNVEAYILLGDIYYSGNDQLGIEPDKDKAIVYYKMAADMSSSRAYEGLAESYQY 221
Query: 288 GDAVPKDLRKALDNYERGCDMGDEVGC 314
G V KD +KA + ++ CD + C
Sbjct: 222 GLGVEKDKKKAEEYMQKACDFDIDKNC 248
Score = 52.4 bits (124), Expect = 8e-06
Identities = 32/111 (28%), Positives = 54/111 (47%)
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
+++ +A ++++E A + + A LG MY GR V KD +KA +F++A
Sbjct: 34 IYKGEEAYNNKEYERAASFYKSAIKNGEPLAYVLLGIMYENGRGVPKDEKKAAEYFQKAV 93
Query: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
D + +G MY +G VPKD +KA++ + + G L MY
Sbjct: 94 DNDIPRGYNNLGVMYKEGRGVPKDEKKAVEYFRIATEKGYTNAYINLGIMY 144
>ref|NP_281603.1| (NC_002163) putative periplasmic protein [Campylobacter jejuni]
pir||C81385 probable periplasmic protein Cj0413 [imported] - Campylobacter
jejuni (strain NCTC 11168)
emb|CAB74249.1| (AL139075) putative periplasmic protein [Campylobacter jejuni]
Length = 234
Score = 109 bits (272), Expect = 5e-23
Identities = 69/223 (30%), Positives = 108/223 (47%), Gaps = 18/223 (8%)
Query: 28 NSFLGVAE-----KAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKA 82
NS ++E K Y++ + KA FK C +S+ C L ++E+ +G D +A
Sbjct: 12 NSLFALSELEEGLKLYEANKFDKAYEIFKSLCEKDISKACFSLAFMHESARGVSKDLNQA 71
Query: 83 LEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQ-EAIDAYAKACVLKHPESCYNLGIIY 141
++Y AC+ C + L Q Y+ EA+ A+ KAC L SC N+ + Y
Sbjct: 72 YKFYDKACKLGLANACSNMALLLQ-----NQGYENEALLAFNKACTLGESLSCNNIALFY 126
Query: 142 DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD 201
+++ G A ++Y++SC+ A+ CY LG Y+KG L VK S A+ +Y K+C L
Sbjct: 127 EKEKDG--QMASSFYKRSCDLKNARACYQLGSLYDKGEL-VKASVKSALAFYSKSCTLGF 183
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCAS 244
G+AC LG + +D A Y AC + CA+
Sbjct: 184 GEACYLLGRYNQLE----KQDLTKAKRYFGMACDQKHQEACAA 222
Score = 95.5 bits (236), Expect = 8e-19
Identities = 56/204 (27%), Positives = 100/204 (48%), Gaps = 17/204 (8%)
Query: 79 YKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLG 138
+ KA E +K+ C+ D + CF L +++ G +++ +A Y KAC L +C N+
Sbjct: 32 FDKAYEIFKSLCEKDISKACFSLAFMHESARGVSKDLNQAYKFYDKACKLGLANACSNMA 91
Query: 139 IIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACR 198
++ + G ++A+ + K+C + C + + YEK ++ A +Y ++C
Sbjct: 92 LLLQNQ--GYENEALLAFNKACTLGESLSCNNIALFYEK-----EKDGQMASSFYKRSCD 144
Query: 199 LDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRY---V 255
L + +AC LGSL++ G+ + + A + K+C L C Y+LGRY
Sbjct: 145 LKNARACYQLGSLYDKGEL-VKASVKSALAFYSKSCTLGFGEAC------YLLGRYNQLE 197
Query: 256 KKDPQKAFNFFKQACDMGSAVSCS 279
K+D KA +F ACD +C+
Sbjct: 198 KQDLTKAKRYFGMACDQKHQEACA 221
Score = 89.4 bits (220), Expect = 6e-17
Identities = 57/200 (28%), Positives = 101/200 (50%), Gaps = 15/200 (7%)
Query: 150 DQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALG 209
D+A ++ C D++K C+ L +E V + ++A +Y KAC+L AC +
Sbjct: 33 DKAYEIFKSLCEKDISKACFSLAFMHESA-RGVSKDLNQAYKFYDKACKLGLANACSNMA 91
Query: 210 SLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQA 269
L +N G + + +AF+ KAC L S C ++ Y +KD Q A +F+K++
Sbjct: 92 LLLQN--QGYENEALLAFN---KACTLGESLSCNNIALFYEK----EKDGQMASSFYKRS 142
Query: 270 CDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKEN 329
CD+ +A +C ++G +Y +G+ V ++ AL Y + C +G C+ L YN +K++
Sbjct: 143 CDLKNARACYQLGSLYDKGELVKASVKSALAFYSKSCTLGFGEACYLLG--RYNQLEKQD 200
Query: 330 ---AIMIYDKGCKLGMKQAC 346
A + C ++AC
Sbjct: 201 LTKAKRYFGMACDQKHQEAC 220
Score = 67.8 bits (164), Expect = 2e-10
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 223 FEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMG 282
F+ A++ + C + S C SL M+ R V KD +A+ F+ +AC +G A +CS M
Sbjct: 32 FDKAYEIFKSLCEKDISKACFSLAFMHESARGVSKDLNQAYKFYDKACKLGLANACSNMA 91
Query: 283 -FMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLG 341
+ +QG +AL + + C +G+ + C +A Y KD + A Y + C L
Sbjct: 92 LLLQNQGYE-----NEALLAFNKACTLGESLSCNNIALFYEKEKDGQMASSFYKRSCDLK 146
Query: 342 MKQACENLTKL 352
+AC L L
Sbjct: 147 NARACYQLGSL 157
>gb|EAA06387.1| (AAAB01008846) agCP13101 [Anopheles gambiae str. PEST]
Length = 849
Score = 104 bits (259), Expect = 2e-21
Identities = 73/284 (25%), Positives = 121/284 (41%), Gaps = 12/284 (4%)
Query: 50 FKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGL 109
F + DG+ + LG +Y G G + KAL YY A ++ LG Y G+
Sbjct: 250 FLELAADGLPDAQMGLGFMYSAGIGFNVSQAKALLYYTLAAAGENSWAQMALGYRYWAGV 309
Query: 110 GTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDR-KIKGNADQA-----------VTYYQ 157
G + + A+D Y K + ++ G R ++ D + + YYQ
Sbjct: 310 GVPNSCETALDYYRKVATKVASQVTFSGGAAVHRIRLLDEVDNSGPSSGILDNDLIDYYQ 369
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDA 217
+ + LG + +G + + +A+ Y+ +A + A LG ++ G
Sbjct: 370 LLADKGDVQAQVGLGQLHYQGGRGIPLDHQRALQYFSQAANAGNAVAMAFLGKIYLEGSD 429
Query: 218 GLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVS 277
+ D E AF Y +KA L N G + LG MY+ G+ V+KD KA +F +A D G
Sbjct: 430 NIKADNETAFKYFKKAADLGNPVGQSGLGIMYLHGKGVRKDTGKALKYFAKAADQGWVDG 489
Query: 278 CSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
++G MY G V +D + A+ + G + + L M+
Sbjct: 490 QLQLGNMYYSGIGVQRDFKLAIKYFSLASQSGHVLAFYNLGQMH 533
Score = 72.0 bits (175), Expect = 1e-11
Identities = 71/286 (24%), Positives = 118/286 (40%), Gaps = 46/286 (16%)
Query: 46 ATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLY 105
A YFKKA + G G + LGI+Y +G+G R D KAL+Y+ A +G LG +Y
Sbjct: 438 AFKYFKKAADLGNPVGQSGLGIMYLHGKGVRKDTGKALKYFAKAADQGWVDGQLQLGNMY 497
Query: 106 DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKI------------------KG 147
G+G ++++ AI ++ A H + YNLG ++ + +G
Sbjct: 498 YSGIGVQRDFKLAIKYFSLASQSGHVLAFYNLGQMHAIGLGMIRSCPTAVELFKNVAERG 557
Query: 148 N-ADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
AD+ ++ YQ ++ + + E G+ EV QSN
Sbjct: 558 KWADRLMSGYQDYRSYRFEESFMQYALLSEMGY-EVAQSN-------------------- 596
Query: 207 ALGSLFENGDAGL----DEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKA 262
G L + + L E+ A Y +A S LG + G D + A
Sbjct: 597 -AGFLLDREEVNLFKDRGEELVRALQYWGRAAAQGYSAAQVKLGDYHYYGMGTLIDYEMA 655
Query: 263 FNFFKQACD-MGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
+ ++ A + +A + +G+M+ QG + KD+ A Y+ D
Sbjct: 656 ASHYRMASEQQNNAQAMFNLGYMHEQGLGMKKDIHLAKRCYDLAAD 701
>gb|AAD05210.1| (AF063095) SELlL [Mus musculus]
gb|AAH26816.1| (BC026816) Sel1 (suppressor of lin-12) 1 homolog (C. elegans) [Mus
musculus]
Length = 740
Score = 99.0 bits (245), Expect = 7e-20
Identities = 89/320 (27%), Positives = 131/320 (40%), Gaps = 30/320 (9%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREG 97
Y + N A F+K +G +G T LG +Y +G G KAL YY +
Sbjct: 180 YLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLYASGLGVNSSQAKALVYYTFGALGGNLIA 239
Query: 98 CFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQ 157
LG Y G+G Q+ + A+ Y V H S +L G+ Q +
Sbjct: 240 HMILGYRYWAGIGVLQSCESALTHYR--LVANHVASDISL-------TGGSVVQRIRLPD 290
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDA 217
+ N M G LE + YY D QA LG L +G
Sbjct: 291 EVENPGM-----------NSGMLE-----EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGR 334
Query: 218 GLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR-YVKKDPQKAFNFFKQACDMGSAV 276
G++++ + AFDY A NS A LG MY G V + + A ++FK+A DMG+ V
Sbjct: 335 GVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPV 394
Query: 277 SCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIM 332
S +G Y G V + AL +++ + G G L MYYN +D + A+
Sbjct: 395 GQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALK 454
Query: 333 IYDKGCKLGMKQACENLTKL 352
++ + G A NL ++
Sbjct: 455 YFNLASQGGHILAFYNLAQM 474
Score = 71.6 bits (174), Expect = 1e-11
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 36/253 (14%)
Query: 83 LEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY 141
++YY+ + D + GLG L+ G G QN+Q A D
Sbjct: 307 IQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFD--------------------- 345
Query: 142 DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD 201
Y+ + N + LG Y +G V QSN A+ Y+ KA + +
Sbjct: 346 -------------YFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 392
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
LG + G G+ ++++A Y QKA G LGSMY G VK+D ++
Sbjct: 393 PVGQSGLGMAYLYG-RGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQ 451
Query: 262 AFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
A +F A G ++ + M++ G V + A++ ++ C+ G A
Sbjct: 452 ALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNS 511
Query: 322 YNMKDKENAIMIY 334
Y +D A++ Y
Sbjct: 512 YKDEDYNAAVVQY 524
Score = 70.1 bits (170), Expect = 4e-11
Identities = 70/305 (22%), Positives = 131/305 (42%), Gaps = 20/305 (6%)
Query: 15 FWSLNAHLWGKQDNSFLGVAEKAYKSGN------YSKATSYFKKACNDGVSEGCTQLGII 68
+++L A+ +FLG K Y G+ A YFKKA + G G + LG+
Sbjct: 346 YFNLAANAGNSHAMAFLG---KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMA 402
Query: 69 YENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVL 128
Y G+G +++Y AL+Y++ A + +G LG +Y G+G ++Y++A+ + A
Sbjct: 403 YLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQG 462
Query: 129 KHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSN 186
H + YNL ++ + + AV ++ C + + L AY +
Sbjct: 463 GHILAFYNLAQMHASGTGVMRSCHTAVELFKNVC--ERGRWSERLMTAYNS---YKDEDY 517
Query: 187 HKAVIYYLKACRLDDGQACRALGSLFENGDA---GLDEDFEVAFDYLQKACGLNNSGGCA 243
+ AV+ YL A + + +A G +E + A + +A +
Sbjct: 518 NAAVVQYLLLAEQGYEVAQSNAAFILDQREATIVGENETYPRALLHWNRAASQGYTVARI 577
Query: 244 SLGSMYMLGRYVKKDPQKAFNFFKQACD-MGSAVSCSRMGFMYSQGDAVPKDLRKALDNY 302
LG + G D + AF ++ A + SA + +G+M+ +G + +D+ A Y
Sbjct: 578 KLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFY 637
Query: 303 ERGCD 307
+ +
Sbjct: 638 DMAAE 642
Score = 47.4 bits (111), Expect = 3e-04
Identities = 28/97 (28%), Positives = 47/97 (47%)
Query: 226 AFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMY 285
A+ YLQKA G+N++ + + G Y+ ++ Q A F++ + GS + +GF+Y
Sbjct: 152 AYRYLQKAAGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLY 211
Query: 286 SQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYY 322
+ G V KAL Y G G+ + L Y+
Sbjct: 212 ASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYW 248
>ref|XP_127076.1| (XM_127076) similar to Sel-1 homolog precursor (Suppressor of
lin-12-like protein) (Sel-1L) [Mus musculus]
sp|Q9Z2G6|SE1L_MOUSE Sel-1 homolog precursor (Suppressor of lin-12-like protein)
(Sel-1L)
dbj|BAB23750.1| (AK005023) Sel1 (suppressor of lin-12) 1 homolog (C. elegans)~data
source:MGD, source key:MGI:1329016,
evidence:ISS~putative [Mus musculus]
Length = 790
Score = 99.0 bits (245), Expect = 7e-20
Identities = 89/320 (27%), Positives = 131/320 (40%), Gaps = 30/320 (9%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREG 97
Y + N A F+K +G +G T LG +Y +G G KAL YY +
Sbjct: 230 YLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLYASGLGVNSSQAKALVYYTFGALGGNLIA 289
Query: 98 CFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQ 157
LG Y G+G Q+ + A+ Y V H S +L G+ Q +
Sbjct: 290 HMILGYRYWAGIGVLQSCESALTHYR--LVANHVASDISL-------TGGSVVQRIRLPD 340
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDA 217
+ N M G LE + YY D QA LG L +G
Sbjct: 341 EVENPGM-----------NSGMLE-----EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGR 384
Query: 218 GLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR-YVKKDPQKAFNFFKQACDMGSAV 276
G++++ + AFDY A NS A LG MY G V + + A ++FK+A DMG+ V
Sbjct: 385 GVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPV 444
Query: 277 SCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIM 332
S +G Y G V + AL +++ + G G L MYYN +D + A+
Sbjct: 445 GQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALK 504
Query: 333 IYDKGCKLGMKQACENLTKL 352
++ + G A NL ++
Sbjct: 505 YFNLASQGGHILAFYNLAQM 524
Score = 71.6 bits (174), Expect = 1e-11
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 36/253 (14%)
Query: 83 LEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY 141
++YY+ + D + GLG L+ G G QN+Q A D
Sbjct: 357 IQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFD--------------------- 395
Query: 142 DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD 201
Y+ + N + LG Y +G V QSN A+ Y+ KA + +
Sbjct: 396 -------------YFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 442
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
LG + G G+ ++++A Y QKA G LGSMY G VK+D ++
Sbjct: 443 PVGQSGLGMAYLYG-RGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQ 501
Query: 262 AFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
A +F A G ++ + M++ G V + A++ ++ C+ G A
Sbjct: 502 ALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERGRWSERLMTAYNS 561
Query: 322 YNMKDKENAIMIY 334
Y +D A++ Y
Sbjct: 562 YKDEDYNAAVVQY 574
Score = 70.1 bits (170), Expect = 4e-11
Identities = 70/305 (22%), Positives = 131/305 (42%), Gaps = 20/305 (6%)
Query: 15 FWSLNAHLWGKQDNSFLGVAEKAYKSGN------YSKATSYFKKACNDGVSEGCTQLGII 68
+++L A+ +FLG K Y G+ A YFKKA + G G + LG+
Sbjct: 396 YFNLAANAGNSHAMAFLG---KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMA 452
Query: 69 YENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVL 128
Y G+G +++Y AL+Y++ A + +G LG +Y G+G ++Y++A+ + A
Sbjct: 453 YLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQG 512
Query: 129 KHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSN 186
H + YNL ++ + + AV ++ C + + L AY +
Sbjct: 513 GHILAFYNLAQMHASGTGVMRSCHTAVELFKNVC--ERGRWSERLMTAYNS---YKDEDY 567
Query: 187 HKAVIYYLKACRLDDGQACRALGSLFENGDA---GLDEDFEVAFDYLQKACGLNNSGGCA 243
+ AV+ YL A + + +A G +E + A + +A +
Sbjct: 568 NAAVVQYLLLAEQGYEVAQSNAAFILDQREATIVGENETYPRALLHWNRAASQGYTVARI 627
Query: 244 SLGSMYMLGRYVKKDPQKAFNFFKQACD-MGSAVSCSRMGFMYSQGDAVPKDLRKALDNY 302
LG + G D + AF ++ A + SA + +G+M+ +G + +D+ A Y
Sbjct: 628 KLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFY 687
Query: 303 ERGCD 307
+ +
Sbjct: 688 DMAAE 692
Score = 47.4 bits (111), Expect = 3e-04
Identities = 28/97 (28%), Positives = 47/97 (47%)
Query: 226 AFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMY 285
A+ YLQKA G+N++ + + G Y+ ++ Q A F++ + GS + +GF+Y
Sbjct: 202 AYRYLQKAAGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLY 261
Query: 286 SQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYY 322
+ G V KAL Y G G+ + L Y+
Sbjct: 262 ASGLGVNSSQAKALVYYTFGALGGNLIAHMILGYRYW 298
>ref|NP_005056.3| (NM_005065) sel-1 suppressor of lin-12-like (C. elegans);
Suppressor of lin 12 (sel-1), C. elegans, homolog of;
sel-1 (suppressor of lin-12, C.elegans)-like [Homo
sapiens]
ref|XP_007325.4| (XM_007325) sel-1 suppressor of lin-12-like (C. elegans) [Homo
sapiens]
sp|Q9UBV2|SE1L_HUMAN Sel-1 homolog precursor (Suppressor of lin-12-like protein)
(Sel-1L)
dbj|BAA87904.1| (AB020335) Pancreas-specific gene [Homo sapiens]
dbj|BAA89204.1| (AB024763) TSA305 [Homo sapiens]
Length = 794
Score = 99.0 bits (245), Expect = 7e-20
Identities = 89/320 (27%), Positives = 130/320 (39%), Gaps = 30/320 (9%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREG 97
Y N A F+K +G +G T LG +Y +G G KAL YY +
Sbjct: 234 YLPQNIQAAREMFEKLTEEGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNLIA 293
Query: 98 CFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQ 157
LG Y G+G Q+ + A+ Y V H S +L G+ Q +
Sbjct: 294 HMVLGYRYWAGIGVLQSCESALTHYR--LVANHVASDISL-------TGGSVVQRIRLPD 344
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDA 217
+ N M G LE + YY D QA LG L +G
Sbjct: 345 EVENPGM-----------NSGMLE-----EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGR 388
Query: 218 GLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR-YVKKDPQKAFNFFKQACDMGSAV 276
G++++ + AFDY A NS A LG MY G V + + A ++FK+A DMG+ V
Sbjct: 389 GVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPV 448
Query: 277 SCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIM 332
S +G Y G V + AL +++ + G G L MYYN +D + A+
Sbjct: 449 GQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALK 508
Query: 333 IYDKGCKLGMKQACENLTKL 352
++ + G A NL ++
Sbjct: 509 YFNLASQGGHILAFYNLAQM 528
Score = 72.0 bits (175), Expect = 1e-11
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 9/235 (3%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
NY A YF+KA G +G QLG +Y NG G + DYK+AL+Y+ A Q + L
Sbjct: 466 NYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNL 525
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYY----Q 157
++ G G ++ A++ + C + L Y+ G+ + AV Y +
Sbjct: 526 AQMHASGTGVMRSCHTAVELFKNVC--ERGRWSERLMTAYNSYKDGDYNAAVIQYLLLAE 583
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDA 217
+ + ++L E + ++ +A++++ +A A LG G
Sbjct: 584 QGYEVAQSNAAFILD-QREASIVGENETYPRALLHWNRAASQGYTVARIKLGDYHFYG-F 641
Query: 218 GLDEDFEVAFDYLQKACGLNNSG-GCASLGSMYMLGRYVKKDPQKAFNFFKQACD 271
G D D+E AF + + A +S +LG M+ G +K+D A F+ A +
Sbjct: 642 GTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAE 696
Score = 70.9 bits (172), Expect = 2e-11
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 83 LEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY 141
++YY+ + D + GLG L+ G G QN+Q A D
Sbjct: 361 IQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFD--------------------- 399
Query: 142 DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD 201
Y+ + N + LG Y +G V QSN A+ Y+ KA + +
Sbjct: 400 -------------YFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
LG + G G+ ++++A Y QKA G LGSMY G VK+D ++
Sbjct: 447 PVGQSGLGMAYLYG-RGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQ 505
Query: 262 AFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMG 309
A +F A G ++ + M++ G V + A++ ++ C+ G
Sbjct: 506 ALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 553
Score = 70.1 bits (170), Expect = 4e-11
Identities = 72/306 (23%), Positives = 132/306 (42%), Gaps = 22/306 (7%)
Query: 15 FWSLNAHLWGKQDNSFLGVAEKAYKSGN------YSKATSYFKKACNDGVSEGCTQLGII 68
+++L A+ +FLG K Y G+ A YFKKA + G G + LG+
Sbjct: 400 YFNLAANAGNSHAMAFLG---KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMA 456
Query: 69 YENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVL 128
Y G+G +++Y AL+Y++ A + +G LG +Y G+G ++Y++A+ + A
Sbjct: 457 YLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQG 516
Query: 129 KHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSN 186
H + YNL ++ + + AV ++ C + + L AY K +
Sbjct: 517 GHILAFYNLAQMHASGTGVMRSCHTAVELFKNVC--ERGRWSERLMTAYN----SYKDGD 570
Query: 187 HK-AVIYYLKACRLDDGQACRALGSLFENGDA---GLDEDFEVAFDYLQKACGLNNSGGC 242
+ AVI YL A + + +A G +E + A + +A +
Sbjct: 571 YNAAVIQYLLLAEQGYEVAQSNAAFILDQREASIVGENETYPRALLHWNRAASQGYTVAR 630
Query: 243 ASLGSMYMLGRYVKKDPQKAFNFFKQACD-MGSAVSCSRMGFMYSQGDAVPKDLRKALDN 301
LG + G D + AF ++ A + SA + +G+M+ +G + +D+ A
Sbjct: 631 IKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRF 690
Query: 302 YERGCD 307
Y+ +
Sbjct: 691 YDMAAE 696
Score = 45.8 bits (107), Expect = 7e-04
Identities = 27/97 (27%), Positives = 46/97 (46%)
Query: 226 AFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMY 285
A+ YLQKA +N++ + + G Y+ ++ Q A F++ + GS + +GF+Y
Sbjct: 206 AYRYLQKAASMNHTKALERVSYALLFGDYLPQNIQAAREMFEKLTEEGSPKGQTALGFLY 265
Query: 286 SQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYY 322
+ G V KAL Y G G+ + L Y+
Sbjct: 266 ASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYW 302
>gb|AAF29413.1|AF052059_1 (AF052059) SEL1L [Homo sapiens]
gb|AAL40905.1| (AF198647) sel-1 [Homo sapiens]
Length = 794
Score = 99.0 bits (245), Expect = 7e-20
Identities = 89/320 (27%), Positives = 130/320 (39%), Gaps = 30/320 (9%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREG 97
Y N A F+K +G +G T LG +Y +G G KAL YY +
Sbjct: 234 YLPQNIQAAREMFEKLTEEGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNLIA 293
Query: 98 CFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQ 157
LG Y G+G Q+ + A+ Y V H S +L G+ Q +
Sbjct: 294 HMVLGYRYWAGIGVLQSCESALTHYR--LVANHVASDISL-------TGGSVVQRIRLPD 344
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDA 217
+ N M G LE + YY D QA LG L +G
Sbjct: 345 EVENPGM-----------NSGMLE-----EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGR 388
Query: 218 GLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR-YVKKDPQKAFNFFKQACDMGSAV 276
G++++ + AFDY A NS A LG MY G V + + A ++FK+A DMG+ V
Sbjct: 389 GVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPV 448
Query: 277 SCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIM 332
S +G Y G V + AL +++ + G G L MYYN +D + A+
Sbjct: 449 GQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALK 508
Query: 333 IYDKGCKLGMKQACENLTKL 352
++ + G A NL ++
Sbjct: 509 YFNLASQGGHILAFYNLAQM 528
Score = 72.0 bits (175), Expect = 1e-11
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 9/235 (3%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
NY A YF+KA G +G QLG +Y NG G + DYK+AL+Y+ A Q + L
Sbjct: 466 NYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNL 525
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYY----Q 157
++ G G ++ A++ + C + L Y+ G+ + AV Y +
Sbjct: 526 AQMHASGTGVMRSCHTAVELFKNVC--ERGRWSERLMTAYNSYKDGDYNAAVIQYLLLAE 583
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDA 217
+ + ++L E + ++ +A++++ +A A LG G
Sbjct: 584 QGYEVAQSNAAFILD-QREASIVGENETYPRALLHWNRAASQGYTVARIKLGDYHFYG-F 641
Query: 218 GLDEDFEVAFDYLQKACGLNNSG-GCASLGSMYMLGRYVKKDPQKAFNFFKQACD 271
G D D+E AF + + A +S +LG M+ G +K+D A F+ A +
Sbjct: 642 GTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAE 696
Score = 70.9 bits (172), Expect = 2e-11
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 83 LEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY 141
++YY+ + D + GLG L+ G G QN+Q A D
Sbjct: 361 IQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFD--------------------- 399
Query: 142 DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD 201
Y+ + N + LG Y +G V QSN A+ Y+ KA + +
Sbjct: 400 -------------YFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
LG + G G+ ++++A Y QKA G LGSMY G VK+D ++
Sbjct: 447 PVGQSGLGMAYLYG-RGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQ 505
Query: 262 AFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMG 309
A +F A G ++ + M++ G V + A++ ++ C+ G
Sbjct: 506 ALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 553
Score = 70.1 bits (170), Expect = 4e-11
Identities = 72/306 (23%), Positives = 132/306 (42%), Gaps = 22/306 (7%)
Query: 15 FWSLNAHLWGKQDNSFLGVAEKAYKSGN------YSKATSYFKKACNDGVSEGCTQLGII 68
+++L A+ +FLG K Y G+ A YFKKA + G G + LG+
Sbjct: 400 YFNLAANAGNSHAMAFLG---KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMA 456
Query: 69 YENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVL 128
Y G+G +++Y AL+Y++ A + +G LG +Y G+G ++Y++A+ + A
Sbjct: 457 YLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQG 516
Query: 129 KHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSN 186
H + YNL ++ + + AV ++ C + + L AY K +
Sbjct: 517 GHILAFYNLAQMHASGTGVMRSCHTAVELFKNVC--ERGRWSERLMTAYN----SYKDGD 570
Query: 187 HK-AVIYYLKACRLDDGQACRALGSLFENGDA---GLDEDFEVAFDYLQKACGLNNSGGC 242
+ AVI YL A + + +A G +E + A + +A +
Sbjct: 571 YNAAVIQYLLLAEQGYEVAQSNAAFILDQREASIVGENETYPRALLHWNRAASQGYTVAR 630
Query: 243 ASLGSMYMLGRYVKKDPQKAFNFFKQACD-MGSAVSCSRMGFMYSQGDAVPKDLRKALDN 301
LG + G D + AF ++ A + SA + +G+M+ +G + +D+ A
Sbjct: 631 IKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRF 690
Query: 302 YERGCD 307
Y+ +
Sbjct: 691 YDMAAE 696
Score = 45.8 bits (107), Expect = 7e-04
Identities = 27/97 (27%), Positives = 46/97 (46%)
Query: 226 AFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMY 285
A+ YLQKA +N++ + + G Y+ ++ Q A F++ + GS + +GF+Y
Sbjct: 206 AYRYLQKAASMNHTKALERVSYALLFGDYLPQNIQAAREMFEKLTEEGSPKGQTALGFLY 265
Query: 286 SQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYY 322
+ G V KAL Y G G+ + L Y+
Sbjct: 266 ASGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYW 302
>gb|AAL47060.1|AF326611_1 (AF326611) JHP318-like protein [Helicobacter pylori]
Length = 131
Score = 97.4 bits (241), Expect = 2e-19
Identities = 47/116 (40%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 192 YYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYML 251
Y+ KAC L+ G+ C +LG L+EN D G++++ + KAC LNN GC +LG +Y
Sbjct: 17 YFEKACNLNYGRGCGSLGDLYEN-DQGVEKNLTKVAYFYSKACDLNNGVGCKNLGFLYEY 75
Query: 252 GRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
G V+KD KA + +ACD+ + C +GF+Y G V K+L KA Y + CD
Sbjct: 76 GEGVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTKAAYFYSKACD 131
Score = 95.5 bits (236), Expect = 8e-19
Identities = 50/121 (41%), Positives = 73/121 (60%), Gaps = 2/121 (1%)
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS 210
QA Y++K+CN + +GC LG YE V+++ K +Y KAC L++G C+ LG
Sbjct: 13 QAKKYFEKACNLNYGRGCGSLGDLYEND-QGVEKNLTKVAYFYSKACDLNNGVGCKNLGF 71
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
L+E G+ G+++D A Y KAC LNN GC LG +Y G+ V+K+ KA F+ +AC
Sbjct: 72 LYEYGE-GVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTKAAYFYSKAC 130
Query: 271 D 271
D
Sbjct: 131 D 131
Score = 90.5 bits (223), Expect = 3e-17
Identities = 46/122 (37%), Positives = 64/122 (51%), Gaps = 4/122 (3%)
Query: 221 EDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSR 280
+DF A Y +KAC LN GC SLG +Y + V+K+ K F+ +ACD+ + V C
Sbjct: 9 KDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDLNNGVGCKN 68
Query: 281 MGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKE----NAIMIYDK 336
+GF+Y G+ V KDL KA + CD+ + GC L +Y + K E A Y K
Sbjct: 69 LGFLYEYGEGVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTKAAYFYSK 128
Query: 337 GC 338
C
Sbjct: 129 AC 130
Score = 87.4 bits (215), Expect = 2e-16
Identities = 44/128 (34%), Positives = 70/128 (54%), Gaps = 2/128 (1%)
Query: 36 KAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDR 95
K+ K+ ++++A YF+KACN GC LG +YEN QG + K +Y AC ++
Sbjct: 4 KSNKAKDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDLNNG 63
Query: 96 EGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNADQAV 153
GC LG LY+ G G ++ +A +KAC L + C LG +Y + ++ N +A
Sbjct: 64 VGCKNLGFLYEYGEGVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSGKGVEKNLTKAA 123
Query: 154 TYYQKSCN 161
+Y K+C+
Sbjct: 124 YFYSKACD 131
Score = 67.4 bits (163), Expect = 2e-10
Identities = 40/124 (32%), Positives = 67/124 (53%), Gaps = 4/124 (3%)
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYV 170
+++ +A + KAC L + C +LG +Y D+ ++ N + +Y K+C+ + GC
Sbjct: 9 KDFTQAKKYFEKACNLNYGRGCGSLGDLYENDQGVEKNLTKVAYFYSKACDLNNGVGCKN 68
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
LG YE G V++ KA Y KAC L++G C LG L+ +G G++++ A +
Sbjct: 69 LGFLYEYG-EGVEKDLIKATQYASKACDLNNGSGCDVLGFLYGSG-KGVEKNLTKAAYFY 126
Query: 231 QKAC 234
KAC
Sbjct: 127 SKAC 130
>dbj|BAB12403.1| (AB048195) SEL1L [Mesocricetus auratus]
Length = 794
Score = 97.4 bits (241), Expect = 2e-19
Identities = 87/320 (27%), Positives = 130/320 (40%), Gaps = 30/320 (9%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREG 97
Y + N A F+K +G +G T LG +Y +G G KAL YY +
Sbjct: 234 YLTQNIQAAKEMFEKLTEEGSPKGQTALGFLYVSGLGVNSSQAKALVYYTFGALGGNLIA 293
Query: 98 CFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQ 157
LG Y G+G Q+ + + Y V H S +L G+ Q +
Sbjct: 294 HMVLGYRYWAGIGVLQSCESVLTHYR--LVANHVASDISL-------TGGSVVQRIRLPD 344
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDA 217
+ N M G LE + YY D QA LG L +G
Sbjct: 345 EVENPGM-----------NSGMLE-----EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGR 388
Query: 218 GLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR-YVKKDPQKAFNFFKQACDMGSAV 276
G++++ + AFDY A NS A LG MY G V + + A ++FK+A DMG+ V
Sbjct: 389 GVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPV 448
Query: 277 SCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIM 332
S +G Y G + + AL +++ + G G L MYYN +D + A+
Sbjct: 449 GQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALK 508
Query: 333 IYDKGCKLGMKQACENLTKL 352
++ + G A NL ++
Sbjct: 509 YFNLASQGGHILAFYNLAQM 528
Score = 71.6 bits (174), Expect = 1e-11
Identities = 60/235 (25%), Positives = 103/235 (43%), Gaps = 9/235 (3%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
NY A YF+KA G +G QLG +Y NG G + DYK+AL+Y+ A Q + L
Sbjct: 466 NYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNL 525
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYY----Q 157
++ G G ++ A++ + C + L Y+ G+ + AV Y +
Sbjct: 526 AQMHASGTGVMRSCHTAVELFKNVC--ERGRWSERLMTAYNSYKDGDYNAAVVQYLLLAE 583
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDA 217
+ + ++L E + ++ +A++++ +A A LG G
Sbjct: 584 QGYEVAQSNAAFILD-QREATIVGENETYPRALLHWNRAASQGYTVARIKLGDYHFYG-F 641
Query: 218 GLDEDFEVAFDYLQKACGLNNSG-GCASLGSMYMLGRYVKKDPQKAFNFFKQACD 271
G D D+E AF + + A +S +LG M+ G +K+D A F+ A +
Sbjct: 642 GTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRFYDMAAE 696
Score = 71.2 bits (173), Expect = 2e-11
Identities = 57/228 (25%), Positives = 93/228 (40%), Gaps = 36/228 (15%)
Query: 83 LEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY 141
++YY+ + D + GLG L+ G G QN+Q A D
Sbjct: 361 IQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFD--------------------- 399
Query: 142 DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD 201
Y+ + N + LG Y +G V QSN A+ Y+ KA + +
Sbjct: 400 -------------YFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGN 446
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
LG + G G+ ++++A Y QKA G LGSMY G VK+D ++
Sbjct: 447 PVGQSGLGMAYLYG-RGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQ 505
Query: 262 AFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMG 309
A +F A G ++ + M++ G V + A++ ++ C+ G
Sbjct: 506 ALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCHTAVELFKNVCERG 553
Score = 69.3 bits (168), Expect = 6e-11
Identities = 71/306 (23%), Positives = 132/306 (42%), Gaps = 22/306 (7%)
Query: 15 FWSLNAHLWGKQDNSFLGVAEKAYKSGN------YSKATSYFKKACNDGVSEGCTQLGII 68
+++L A+ +FLG K Y G+ A YFKKA + G G + LG+
Sbjct: 400 YFNLAANAGNSHAMAFLG---KMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMA 456
Query: 69 YENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVL 128
Y G+G +++Y AL+Y++ A + +G LG +Y G+G ++Y++A+ + A
Sbjct: 457 YLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQG 516
Query: 129 KHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSN 186
H + YNL ++ + + AV ++ C + + L AY K +
Sbjct: 517 GHILAFYNLAQMHASGTGVMRSCHTAVELFKNVC--ERGRWSERLMTAYN----SYKDGD 570
Query: 187 HK-AVIYYLKACRLDDGQACRALGSLFENGDA---GLDEDFEVAFDYLQKACGLNNSGGC 242
+ AV+ YL A + + +A G +E + A + +A +
Sbjct: 571 YNAAVVQYLLLAEQGYEVAQSNAAFILDQREATIVGENETYPRALLHWNRAASQGYTVAR 630
Query: 243 ASLGSMYMLGRYVKKDPQKAFNFFKQACD-MGSAVSCSRMGFMYSQGDAVPKDLRKALDN 301
LG + G D + AF ++ A + SA + +G+M+ +G + +D+ A
Sbjct: 631 IKLGDYHFYGFGTDVDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQDIHLAKRF 690
Query: 302 YERGCD 307
Y+ +
Sbjct: 691 YDMAAE 696
Score = 47.4 bits (111), Expect = 3e-04
Identities = 32/124 (25%), Positives = 55/124 (43%), Gaps = 15/124 (12%)
Query: 226 AFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMY 285
A+ YLQKA G+N++ + + G Y+ ++ Q A F++ + GS + +GF+Y
Sbjct: 206 AYRYLQKAAGMNHTKALERVSYALLFGDYLTQNIQAAKEMFEKLTEEGSPKGQTALGFLY 265
Query: 286 SQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQA 345
G V KAL Y G G+ + L Y+ +G+ Q+
Sbjct: 266 VSGLGVNSSQAKALVYYTFGALGGNLIAHMVLGYRYW---------------AGIGVLQS 310
Query: 346 CENL 349
CE++
Sbjct: 311 CESV 314
>ref|NP_207422.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||D64598 hypothetical protein HP0628 - Helicobacter pylori (strain 26695)
gb|AAD07699.1| (AE000577) H. pylori predicted coding region HP0628 [Helicobacter
pylori 26695]
Length = 225
Score = 95.5 bits (236), Expect = 8e-19
Identities = 65/231 (28%), Positives = 91/231 (39%), Gaps = 36/231 (15%)
Query: 54 CNDGVSEGCTQLGIIYENGQGTRI-DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTT 112
C+ G + C L +YEN + D + AL+ Y ACQ D C LG ++ G G
Sbjct: 3 CSGGDATACANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVP 62
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLG 172
++Y +A ++YY+ SC GCY LG
Sbjct: 63 KDYYKA----------------------------------ISYYKFSCENGNDMGCYNLG 88
Query: 173 VAYE-KGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQ 231
+ + ++ V AC D C LG ++ NGD G + A Y Q
Sbjct: 89 LMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGCANLGWIYANGDLGAPLNNHYAAKYFQ 148
Query: 232 KACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMG 282
AC G C +LG +Y G V +D Q+A + F ACD G SC G
Sbjct: 149 MACDGGILGSCNNLGVLYQKGLGVPQDDQRALDLFSYACDNGFESSCRNYG 199
Score = 84.0 bits (206), Expect = 2e-15
Identities = 57/185 (30%), Positives = 83/185 (44%), Gaps = 6/185 (3%)
Query: 35 EKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADD 94
+K S + A + AC G C LG ++ NG G DY KA+ YYK +C+ +
Sbjct: 21 KKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVPKDYYKAISYYKFSCENGN 80
Query: 95 REGCFGLGGLYDEG--LGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKG---NA 149
GC+ LG + + G + +D AC C NLG IY G N
Sbjct: 81 DMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGCANLGWIYANGDLGAPLNN 140
Query: 150 DQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALG 209
A Y+Q +C+ + C LGV Y+KG L V Q + +A+ + AC +CR G
Sbjct: 141 HYAAKYFQMACDGGILGSCNNLGVLYQKG-LGVPQDDQRALDLFSYACDNGFESSCRNYG 199
Query: 210 SLFEN 214
+ E+
Sbjct: 200 NFKEH 204
Score = 82.4 bits (202), Expect = 7e-15
Identities = 56/187 (29%), Positives = 87/187 (45%), Gaps = 6/187 (3%)
Query: 133 SCYNLGIIYDRKIKGNA---DQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKA 189
+C NL +Y+ K ++ + A+ Y +C C LG + G V + +KA
Sbjct: 10 ACANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGS-GVPKDYYKA 68
Query: 190 VIYYLKACRLDDGQACRALGSLFE-NGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSM 248
+ YY +C + C LG + N G+D+ D AC + GCA+LG +
Sbjct: 69 ISYYKFSCENGNDMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGCANLGWI 128
Query: 249 YMLGRY-VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
Y G + A +F+ ACD G SC+ +G +Y +G VP+D ++ALD + CD
Sbjct: 129 YANGDLGAPLNNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGVPQDDQRALDLFSYACD 188
Query: 308 MGDEVGC 314
G E C
Sbjct: 189 NGFESSC 195
Score = 65.5 bits (158), Expect = 9e-10
Identities = 44/160 (27%), Positives = 68/160 (42%), Gaps = 7/160 (4%)
Query: 197 CRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVK 256
C D AC L ++EN D E A AC + C +LG M+ G V
Sbjct: 3 CSGGDATACANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNNLGWMFANGSGVP 62
Query: 257 KDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGD--AVPKDLRKALDNYERGCDMGDEVGC 314
KD KA +++K +C+ G+ + C +G M + + + K +D C+ GD +GC
Sbjct: 63 KDYYKAISYYKFSCENGNDMGCYNLGLMSNVNNIYGIDKAQLSQVDLNYLACNAGDMMGC 122
Query: 315 FALAGMYYN-----MKDKENAIMIYDKGCKLGMKQACENL 349
L +Y N + A + C G+ +C NL
Sbjct: 123 ANLGWIYANGDLGAPLNNHYAAKYFQMACDGGILGSCNNL 162
Score = 65.5 bits (158), Expect = 9e-10
Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 1/97 (1%)
Query: 53 ACNDGVSEGCTQLGIIYENGQ-GTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGT 111
ACN G GC LG IY NG G ++ A +Y++ AC C LG LY +GLG
Sbjct: 113 ACNAGDMMGCANLGWIYANGDLGAPLNNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGV 172
Query: 112 TQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGN 148
Q+ Q A+D ++ AC SC N G + ++ N
Sbjct: 173 PQDDQRALDLFSYACDNGFESSCRNYGNFKEHLLRVN 209
Score = 50.1 bits (118), Expect = 4e-05
Identities = 23/74 (31%), Positives = 34/74 (45%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
N A YF+ AC+ G+ C LG++Y+ G G D ++AL+ + AC C
Sbjct: 139 NNHYAAKYFQMACDGGILGSCNNLGVLYQKGLGVPQDDQRALDLFSYACDNGFESSCRNY 198
Query: 102 GGLYDEGLGTTQNY 115
G + L NY
Sbjct: 199 GNFKEHLLRVNPNY 212
Score = 43.1 bits (100), Expect = 0.005
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 305 GCDMGDEVGCFALAGMYYNMK-----DKENAIMIYDKGCKLGMKQACENL 349
GC GD C LA MY N K DKENA+ +Y C+ G AC NL
Sbjct: 2 GCSGGDATACANLAQMYENKKNADSNDKENALQLYAVACQGGDMLACNNL 51
>ref|NP_459646.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL19605.1| (AE008726) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 331
Score = 94.4 bits (233), Expect = 2e-18
Identities = 69/265 (26%), Positives = 121/265 (45%), Gaps = 7/265 (2%)
Query: 14 FFWSLNAHLWGKQDNSF-LGVAEKAYKSGNYSKATSYF--KKACNDGVSEGCTQLGIIYE 70
F+W A G + + LG+ K + + F +KA G LG + E
Sbjct: 52 FYWLQQAAEQGHCEAQYWLGLRYKDTPTDMKDNTLALFWSEKAAQQGHRHAFNTLGWVQE 111
Query: 71 NGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKH 130
G DY +A+ +Y+ + + LG +Y G G QN +A+ + +A + H
Sbjct: 112 GETGMAPDYAQAVAWYRKGAEQSHNLAQYNLGRMYHSGTGVEQNDTQALYWFKQAALQGH 171
Query: 131 PESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHK 188
S L +Y + + N A +Y+KS + + Y +G Y G +KQ +
Sbjct: 172 CASQERLAYMYGNGKGCRKNLSLAALWYKKSALQESSYSQYQMGYCYYIG-KGIKQDYQQ 230
Query: 189 AVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSM 248
A+ ++ KA D A ++G +++ G G+++++ +A ++ K+ NNS G +LG M
Sbjct: 231 AIYWFRKAADQGDDDAYNSIGWMYKCGH-GVEQNYSLALEWFHKSAECNNSSGWYNLGCM 289
Query: 249 YMLGRYVKKDPQKAFNFFKQACDMG 273
Y G +D Q+A +FK+A G
Sbjct: 290 YRDGHGTAQDLQQALYWFKKAQPTG 314
Score = 68.9 bits (167), Expect = 8e-11
Identities = 72/304 (23%), Positives = 134/304 (43%), Gaps = 11/304 (3%)
Query: 57 GVSEGCTQLGIIY--ENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQN 114
G SE LG +Y E G+ D K + + + A + E + LG Y + ++
Sbjct: 25 GNSEAQYILGRLYNDERIDGSEED-KLSFYWLQQAAEQGHCEAQYWLGLRYKDTPTDMKD 83
Query: 115 YQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD--QAVTYYQKSCNFDMAKGCYVLG 172
A+ KA H + LG + + + D QAV +Y+K Y LG
Sbjct: 84 NTLALFWSEKAAQQGHRHAFNTLGWVQEGETGMAPDYAQAVAWYRKGAEQSHNLAQYNLG 143
Query: 173 VAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQK 232
Y G V+Q++ +A+ ++ +A + L ++ NG G ++ +A + +K
Sbjct: 144 RMYHSG-TGVEQNDTQALYWFKQAALQGHCASQERLAYMYGNGK-GCRKNLSLAALWYKK 201
Query: 233 ACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVP 292
+ +S +G Y +G+ +K+D Q+A +F++A D G + + +G+MY G V
Sbjct: 202 SALQESSYSQYQMGYCYYIGKGIKQDYQQAIYWFRKAADQGDDDAYNSIGWMYKCGHGVE 261
Query: 293 KDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACEN 348
++ AL+ + + + + G + L MY + +D + A+ + K G E
Sbjct: 262 QNYSLALEWFHKSAECNNSSGWYNLGCMYRDGHGTAQDLQQALYWFKKAQPTGKWNVDEE 321
Query: 349 LTKL 352
+ KL
Sbjct: 322 IRKL 325
>ref|NP_460716.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL20675.1| (AE008778) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 509
Score = 92.8 bits (229), Expect = 5e-18
Identities = 85/329 (25%), Positives = 144/329 (42%), Gaps = 23/329 (6%)
Query: 27 DNSFLGVAEKAYKSG-----NYSKATSYFKKAC---NDG--------VSEGCTQLGIIYE 70
D+S + AY G N A +++KA ND S +LG++Y
Sbjct: 122 DSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYA 181
Query: 71 NGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKH 130
+GQG DY++ + A + LG Y G G Q+Y++A+ + +
Sbjct: 182 HGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSY 241
Query: 131 PESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAV 190
L +YD+ + + T+Y+K+ MAK Y GV Y G+ +K N A+
Sbjct: 242 TPGHIPLNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNGYHLLKDHN-LAL 300
Query: 191 IYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYM 250
+Y +A +A A+G +F G+ G+ +D++ A + +KA LG M
Sbjct: 301 EWYRRAAAQGLAEAQDAIGVMFMQGE-GVSQDYQQALAWYRKAARQGLPAAQTHLGIMSA 359
Query: 251 LGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGD 310
GR V + ++A ++++A A + ++G YS G VP++ R AL Y + + G
Sbjct: 360 FGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSTGRGVPENSRNALKWYLKAAEQGF 419
Query: 311 EVGCFALAGMYYN-----MKDKENAIMIY 334
AL +Y + KD + A + Y
Sbjct: 420 TPAQSALGEIYAHGRQGVPKDNKQAYIWY 448
Score = 66.2 bits (160), Expect = 5e-10
Identities = 79/338 (23%), Positives = 133/338 (38%), Gaps = 39/338 (11%)
Query: 34 AEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQAD 93
AE Y +Y A + +KA G LG Y G+ + +KALE+Y+ A +
Sbjct: 62 AEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELG 121
Query: 94 DREGCFGLGGLYDEGLGTTQNYQEAIDAYAKAC-------VLKHPESC----YNLGIIY- 141
D LG Y G G QN Q A++ Y KA V++ S + LG++Y
Sbjct: 122 DSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYA 181
Query: 142 -DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLD 200
+ + + Q +K+ LGVAY G E +++ +Y+L
Sbjct: 182 HGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYG--EGVPQDYRQAVYWLN----- 234
Query: 201 DGQACRALGSLFENGDAGLDEDFEVAF--------DYLQKACGLNNSGGCASLGSMYMLG 252
+ + G L+ ++ A + +K + + G Y G
Sbjct: 235 -----EGIPGSYTPGHIPLNALYDKAHPADRVHSQTWYRKTAQRVMAKVQYNFGVWYYNG 289
Query: 253 RYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMG--- 309
++ KD A ++++A G A + +G M+ QG+ V +D ++AL Y + G
Sbjct: 290 YHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEGVSQDYQQALAWYRKAARQGLPA 349
Query: 310 --DEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQA 345
+G + G D++ AI Y K K +A
Sbjct: 350 AQTHLGIMSAFGRGVAQSDRQ-AIAWYRKAAKQDFAKA 386
Score = 55.1 bits (131), Expect = 1e-06
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 40 SGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCF 99
S +Y +A ++++KA G+ T LGI+ G+G ++A+ +Y+ A + D + +
Sbjct: 329 SQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQY 388
Query: 100 GLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKG----NADQAVTY 155
LG Y G G +N + A+ Y KA + LG IY +G N + Y
Sbjct: 389 QLGVAYSTGRGVPENSRNALKWYLKAAEQGFTPAQSALGEIYAHGRQGVPKDNKQAYIWY 448
Query: 156 YQKSCNFDMAK 166
Y S + +K
Sbjct: 449 YMASMYTEKSK 459
Score = 50.8 bits (120), Expect = 2e-05
Identities = 26/67 (38%), Positives = 39/67 (57%)
Query: 244 SLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYE 303
SLGS Y GRYVK D + A + ++A GS S +G+ Y+ G+ P +KAL+ Y
Sbjct: 56 SLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYR 115
Query: 304 RGCDMGD 310
+ ++GD
Sbjct: 116 KAAELGD 122
>ref|NP_651179.1| (NM_142922) BcDNA:LD23587 gene product [Drosophila melanogaster]
gb|AAD55437.1|AF181652_1 (AF181652) BcDNA.LD23587 [Drosophila melanogaster]
gb|AAF56178.1| (AE003744) BcDNA:LD23587 gene product [Drosophila melanogaster]
Length = 819
Score = 92.4 bits (228), Expect = 7e-18
Identities = 72/288 (25%), Positives = 122/288 (42%), Gaps = 9/288 (3%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTR-IDYKKALEYYKTACQADDREGCFG 100
+++ A F+ N+GV E LG +Y G G + + AL +Y A D+
Sbjct: 201 DFNHAVDEFESLANEGVPEAHMGLGFLYSVGVGGKNVSQPLALIHYSLAALGDNTPAQMA 260
Query: 101 LGGLYDEGLGTTQNYQEAIDAY-------AKACVLKHPESCYNLGIIYDRKIKGNAD-QA 152
+G Y G+ + ++A+ Y A + + + ++ D + G+++ +
Sbjct: 261 MGYRYLYGINVPISCEKALIHYKRVAKKVASKITFANGPVVHRVRLLDDLENPGSSETEI 320
Query: 153 VTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLF 212
V YY+ + + LG Y +G +Q + KA+ Y+ A LG L+
Sbjct: 321 VDYYKLLADKGDIQSQVGLGQVYYQGGKVTEQDHQKALEYFKMAADAGSAVGIAFLGKLY 380
Query: 213 ENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDM 272
G + D + AF Y KA + + G + LG MY+ G V KD KA ++F QA D
Sbjct: 381 LEGSDQIRADNDAAFGYFSKAAEMGDPVGQSGLGLMYLKGLGVPKDSIKALSYFTQAADQ 440
Query: 273 GSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGM 320
G ++G MY G+ V D + A + G + + L M
Sbjct: 441 GWVDGQLQLGNMYFTGNGVKTDYKLAFKYFNLATQSGHVLAYYNLGVM 488
Score = 64.3 bits (155), Expect = 2e-09
Identities = 64/268 (23%), Positives = 105/268 (38%), Gaps = 36/268 (13%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
KA SYF +A + G +G QLG +Y G G + DYK A +Y+ A Q+ + LG +
Sbjct: 429 KALSYFTQAADQGWVDGQLQLGNMYFTGNGVKTDYKLAFKYFNLATQSGHVLAYYNLGVM 488
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDM 164
G+G ++ A++ + V + L + Y D+A Y
Sbjct: 489 NAYGMGMLRSCPAAVEFF--KTVSERGRWSSRLMMAYSDYKNNRIDEAYMQY-------- 538
Query: 165 AKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFE 224
+ E G+ EV QSN ++ + +D ED
Sbjct: 539 -------SLMAEMGY-EVAQSNAAFLLDRKEVHVFNDRH-----------------EDLI 573
Query: 225 VAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMG-SAVSCSRMGF 283
AF Y ++A G S LG Y G D + A +++A + +A + +G+
Sbjct: 574 RAFYYWKRAAGQGYSAAQVKLGDYYYYGWGTSTDFETAAALYRKASEQQYNAQAMFNLGY 633
Query: 284 MYSQGDAVPKDLRKALDNYERGCDMGDE 311
M+ QG + KD A Y+ + +
Sbjct: 634 MHEQGLGMKKDWHLAKRLYDLAAETNSD 661
>ref|NP_455743.1| (NC_003198) putative secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD08375.1| (AL627269) putative secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 509
Score = 91.7 bits (226), Expect = 1e-17
Identities = 84/329 (25%), Positives = 144/329 (43%), Gaps = 23/329 (6%)
Query: 27 DNSFLGVAEKAYKSG-----NYSKATSYFKKAC---NDG--------VSEGCTQLGIIYE 70
D+S + AY G N A +++KA ND S +LG++Y
Sbjct: 122 DSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYA 181
Query: 71 NGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKH 130
+GQG DY++ + A + LG Y G G Q+Y++A+ + +
Sbjct: 182 HGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYGEGVPQDYRQAVYWLNEGIPGSY 241
Query: 131 PESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAV 190
L +YD+ + + T+Y+K+ MAK + GV Y G+ +K N A+
Sbjct: 242 TPGHIPLNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNGYHLLKDHN-LAL 300
Query: 191 IYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYM 250
+Y +A +A A+G +F G+A + +D++ A + +KA LG M
Sbjct: 301 EWYRRAAAQGLAEAQDAIGVMFMQGEA-VSQDYQQALAWYRKAARQGLPAAQTHLGIMSA 359
Query: 251 LGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGD 310
GR V + ++A ++++A A + ++G YS G VP++ R AL Y + + G
Sbjct: 360 FGRGVAQSDRQAIAWYRKAAKQDFAKAQYQLGVAYSMGRGVPENSRNALKWYLKAAEQGF 419
Query: 311 EVGCFALAGMYYN-----MKDKENAIMIY 334
AL +Y + KD + A + Y
Sbjct: 420 TPAQLALGEIYAHGRQGVPKDNKQAYIWY 448
Score = 67.8 bits (164), Expect = 2e-10
Identities = 80/338 (23%), Positives = 134/338 (38%), Gaps = 39/338 (11%)
Query: 34 AEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQAD 93
AE Y +Y A + +KA G LG Y G+ + +KALE+Y+ A +
Sbjct: 62 AEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGENFPLSRQKALEWYRKAAELG 121
Query: 94 DREGCFGLGGLYDEGLGTTQNYQEAIDAYAKAC-------VLKHPESC----YNLGIIY- 141
D LG Y G G QN Q A++ Y KA V++ S + LG++Y
Sbjct: 122 DSSTQEILGDAYMYGDGFPQNTQLALEWYRKAASPTNDAGVVRGQGSASSAQFKLGVMYA 181
Query: 142 -DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLD 200
+ + + Q +K+ LGVAY G E +++ +Y+L
Sbjct: 182 HGQGVPQDYQQTAILMRKAAENMYYPAQLYLGVAYFYG--EGVPQDYRQAVYWLN----- 234
Query: 201 DGQACRALGSLFENGDAGLDEDFEVAF--------DYLQKACGLNNSGGCASLGSMYMLG 252
+ + G L+ ++ A + +K + + G Y G
Sbjct: 235 -----EGIPGSYTPGHIPLNALYDKAHPADQVHSQTWYRKTAQRVMAKVQFNFGVWYYNG 289
Query: 253 RYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMG--- 309
++ KD A ++++A G A + +G M+ QG+AV +D ++AL Y + G
Sbjct: 290 YHLLKDHNLALEWYRRAAAQGLAEAQDAIGVMFMQGEAVSQDYQQALAWYRKAARQGLPA 349
Query: 310 --DEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQA 345
+G + G D++ AI Y K K +A
Sbjct: 350 AQTHLGIMSAFGRGVAQSDRQ-AIAWYRKAAKQDFAKA 386
Score = 55.1 bits (131), Expect = 1e-06
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 4/131 (3%)
Query: 40 SGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCF 99
S +Y +A ++++KA G+ T LGI+ G+G ++A+ +Y+ A + D + +
Sbjct: 329 SQDYQQALAWYRKAARQGLPAAQTHLGIMSAFGRGVAQSDRQAIAWYRKAAKQDFAKAQY 388
Query: 100 GLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKG----NADQAVTY 155
LG Y G G +N + A+ Y KA + LG IY +G N + Y
Sbjct: 389 QLGVAYSMGRGVPENSRNALKWYLKAAEQGFTPAQLALGEIYAHGRQGVPKDNKQAYIWY 448
Query: 156 YQKSCNFDMAK 166
Y S + +K
Sbjct: 449 YMASIYTEKSK 459
Score = 52.4 bits (124), Expect = 8e-06
Identities = 28/81 (34%), Positives = 44/81 (53%)
Query: 230 LQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGD 289
L++ + G SLGS Y GRYVK D + A + ++A GS S +G+ Y+ G+
Sbjct: 42 LEQKAEQGDEGAQFSLGSWYAEGRYVKPDYKLAIKWLEKAGKQGSDFSYFILGYHYNYGE 101
Query: 290 AVPKDLRKALDNYERGCDMGD 310
P +KAL+ Y + ++GD
Sbjct: 102 NFPLSRQKALEWYRKAAELGD 122
>ref|NP_207134.1| (NC_000915) hypothetical protein [Helicobacter pylori 26695]
pir||H64561 invalid gene - Helicobacter pylori (strain 26695)
gb|AAD07408.1| (AE000551) H. pylori predicted coding region HP0336 [Helicobacter
pylori 26695]
Length = 138
Score = 91.7 bits (226), Expect = 1e-17
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 7/133 (5%)
Query: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGG 241
VK+ KA+ YY+KAC L++ C +L S + L F YL KAC LN+ G
Sbjct: 7 VKKDLKKAIQYYVKACELNEMFGCLSLVSNSQINKQKL-------FQYLSKACELNSGNG 59
Query: 242 CASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDN 301
C LG Y G+YVKKD +KA ++ +AC + C +G+ G V K+ ++A+
Sbjct: 60 CRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKT 119
Query: 302 YERGCDMGDEVGC 314
+E+ C +G E C
Sbjct: 120 FEKACRLGSEDAC 132
Score = 87.8 bits (216), Expect = 2e-16
Identities = 46/136 (33%), Positives = 68/136 (49%), Gaps = 10/136 (7%)
Query: 215 GDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGS 274
G + +D + A Y KAC LN GC SL S + + QK F + +AC++ S
Sbjct: 3 GGGTVKKDLKKAIQYYVKACELNEMFGCLSLVSNSQINK------QKLFQYLSKACELNS 56
Query: 275 AVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENA 330
C +G Y G V KDLRKA Y + C + D+ GC L Y +K+++ A
Sbjct: 57 GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQA 116
Query: 331 IMIYDKGCKLGMKQAC 346
+ ++K C+LG + AC
Sbjct: 117 VKTFEKACRLGSEDAC 132
Score = 73.2 bits (178), Expect = 4e-12
Identities = 35/93 (37%), Positives = 49/93 (52%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
N K Y KAC GC LG YENG+ + D +KA +YY AC +D++GC L
Sbjct: 40 NKQKLFQYLSKACELNSGNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLIL 99
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESC 134
G G G +N ++A+ + KAC L ++C
Sbjct: 100 GYKQYAGKGVVKNEKQAVKTFEKACRLGSEDAC 132
Score = 68.9 bits (167), Expect = 8e-11
Identities = 47/142 (33%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 72 GQGT-RIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKH 130
G GT + D KKA++YY AC+ ++ GC L + N Q+ +KAC L
Sbjct: 3 GGGTVKKDLKKAIQYYVKACELNEMFGCLSLVS------NSQINKQKLFQYLSKACELNS 56
Query: 131 PESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHK 188
C LG Y+ + +K + +A YY K+C + GC +LG G VK + +
Sbjct: 57 GNGCRFLGDFYENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVK-NEKQ 115
Query: 189 AVIYYLKACRLDDGQACRALGS 210
AV + KACRL AC L +
Sbjct: 116 AVKTFEKACRLGSEDACGILNN 137
Score = 62.0 bits (149), Expect = 1e-08
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 8/129 (6%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
KA Y+ KAC GC L ++I+ +K +Y AC+ + GC LG
Sbjct: 13 KAIQYYVKACELNEMFGCLSLV------SNSQINKQKLFQYLSKACELNSGNGCRFLGDF 66
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGI--IYDRKIKGNADQAVTYYQKSCNF 162
Y+ G ++ ++A Y+KAC L + C LG + + N QAV ++K+C
Sbjct: 67 YENGKYVKKDLRKAAQYYSKACGLNDQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRL 126
Query: 163 DMAKGCYVL 171
C +L
Sbjct: 127 GSEDACGIL 135
>ref|XP_046437.2| (XM_046437) similar to dJ842G6.2 (novel protein imilar to SEL1L
(sel-1 (suppressor of lin-12, C.elegans)-like)) [Homo
sapiens]
Length = 387
Score = 86.7 bits (213), Expect = 4e-16
Identities = 71/299 (23%), Positives = 117/299 (38%), Gaps = 26/299 (8%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
N + A ++ +G + LG + G G D KAL YY + L
Sbjct: 50 NITAAIQLYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMIL 109
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKAC-------------------VLKHPESCYNLGIIYD 142
G Y G+ QN + A+ Y K + + PE+ + I D
Sbjct: 110 GYRYLSGINVLQNCEVALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILD 169
Query: 143 RKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDG 202
I YY+ + LG + G + Q +KA+ Y+LKA +
Sbjct: 170 WDI-------YQYYKFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSA 222
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKA 262
A +G ++ G+A + ++ AF Y A N+ G LG +Y G+ V + +A
Sbjct: 223 NAMAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEA 282
Query: 263 FNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
+F++A + G + ++GFMY G + KD + A + G + + LA MY
Sbjct: 283 LKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMY 341
Score = 52.4 bits (124), Expect = 8e-06
Identities = 26/79 (32%), Positives = 42/79 (52%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
NY++A YF+KA G + QLG +Y +G G DYK A +Y+ A Q+ + L
Sbjct: 278 NYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYL 337
Query: 102 GGLYDEGLGTTQNYQEAID 120
+Y G G ++ + A++
Sbjct: 338 AKMYATGTGVVRSCRTAVE 356
>emb|CAB65792.2| (AL109657) dJ842G6.2 (novel protein imilar to SEL1L (sel-1
(suppressor of lin-12, C.elegans)-like)) [Homo sapiens]
Length = 505
Score = 86.3 bits (212), Expect = 5e-16
Identities = 73/300 (24%), Positives = 119/300 (39%), Gaps = 30/300 (10%)
Query: 65 LGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAK 124
LG + G G D KAL YY + LG Y G+ QN + A+ Y K
Sbjct: 2 LGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSGINVLQNCEVALSYYKK 61
Query: 125 AC-------------------VLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMA 165
+ + PE+ + I D I YY+
Sbjct: 62 VADYIADTFEKSEGVPVEKVRLTERPENLSSNSEILDWDI-------YQYYKFLAERGDV 114
Query: 166 KGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEV 225
+ LG + G + Q +KA+ Y+LKA + A +G ++ G+A + ++
Sbjct: 115 QIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAGSANAMAFIGKMYLEGNAAVPQNNAT 174
Query: 226 AFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMY 285
AF Y A N+ G LG +Y G+ V + +A +F++A + G + ++GFMY
Sbjct: 175 AFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMY 234
Query: 286 SQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLG 341
G + KD + A + G + + LA MY ++ A+ +Y C+LG
Sbjct: 235 YSGSGIWKDYKLAFKYFYLASQSGQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCELG 294
Score = 69.7 bits (169), Expect = 5e-11
Identities = 63/263 (23%), Positives = 106/263 (39%), Gaps = 37/263 (14%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
NY++A YF+KA G + QLG +Y +G G DYK A +Y+ A Q+ + L
Sbjct: 207 NYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDYKLAFKYFYLASQSGQPLAIYYL 266
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCN 161
+Y G G ++ + A++ Y C L H A++ +T Y +
Sbjct: 267 AKMYATGTGVVRSCRTAVELYKGVCELGH-----------------WAEKFLTAYFAYKD 309
Query: 162 FDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDE 221
D+ + E G+ EV QSN ++ KA L+ ++
Sbjct: 310 GDIDSSLVQYALLAEMGY-EVAQSNSAFILESKKANILEK------------------EK 350
Query: 222 DFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACD-MGSAVSCSR 280
+ +A +A N+ +G + G KKD Q A + A + +A +
Sbjct: 351 MYPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYHNAQAMFN 410
Query: 281 MGFMYSQGDAVPKDLRKALDNYE 303
+ +MY G + KD+ A Y+
Sbjct: 411 LAYMYEHGLGITKDIHLARRLYD 433
>ref|NP_415177.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
pir||B64799 hypothetical protein b0644 - Escherichia coli
gb|AAB40845.1| (U82598) hypothetical protein [Escherichia coli]
gb|AAC73745.1| (AE000169) orf, hypothetical protein [Escherichia coli K12]
dbj|BAA35291.1| (D90704) Sel-1 protein [Escherichia coli]
Length = 327
Score = 85.5 bits (210), Expect = 8e-16
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 6/272 (2%)
Query: 35 EKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADD 94
+ A S + KA + K A G E LG Y + D ++A+ + K A
Sbjct: 40 DSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGH 99
Query: 95 REGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVT 154
LG D G NY+EA+ Y A + NLG +Y D A+
Sbjct: 100 TFASNALGWTLDRG--EAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALA 157
Query: 155 Y--YQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLF 212
+ Y+++ + L YE G V Q+ A +YLK+ + + A + +
Sbjct: 158 FFWYKQAALQGHSDAQNNLADLYEDG-KGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDY 216
Query: 213 ENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDM 272
G+ G+D+D++ A + KA + G ++G MY G+ V+KD Q AF +F +A +
Sbjct: 217 NAGE-GVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAEC 275
Query: 273 GSAVSCSRMGFMYSQGDAVPKDLRKALDNYER 304
A + + MY G+ P DLR+ALD Y +
Sbjct: 276 NDATAWYNLAIMYHYGEGRPVDLRQALDLYRK 307
Score = 77.4 bits (189), Expect = 2e-13
Identities = 70/276 (25%), Positives = 114/276 (40%), Gaps = 13/276 (4%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNL 137
D +KA + K A + E + LG Y E ++ ++AI KA + H + L
Sbjct: 47 DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNAL 106
Query: 138 GIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKAC 197
G DR N +AV +YQ + M+ LG Y G V + A +Y +A
Sbjct: 107 GWTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGN-GVAKDYALAFFWYKQAA 165
Query: 198 RLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKK 257
A L L+E+G AF YL K+ N + Y G V +
Sbjct: 166 LQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYL-KSAQQGNRHAQFQIAWDYNAGEGVDQ 224
Query: 258 DPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFAL 317
D ++A ++ +A GS + +G+MY G V KD + A + + + + D + L
Sbjct: 225 DYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNL 284
Query: 318 AGMYYNMKDKENAIMIYDKGCKLGMKQACENLTKLR 353
A MY+ Y +G + ++QA + K++
Sbjct: 285 AIMYH-----------YGEGRPVDLRQALDLYRKVQ 309
Score = 73.6 bits (179), Expect = 3e-12
Identities = 57/232 (24%), Positives = 108/232 (45%), Gaps = 6/232 (2%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
+A + KKA G + LG + G+ +YK+A+ +Y+ A ++ LG +
Sbjct: 86 QAIFWLKKAALQGHTFASNALGWTLDRGEAP--NYKEAVVWYQIAAESGMSYAQNNLGWM 143
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNF 162
Y G G ++Y A Y +A + H ++ NL +Y+ + + N A +Y KS
Sbjct: 144 YRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQ 203
Query: 163 DMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDED 222
+ + Y G V Q +A+ +YLKA A +G ++++G G+++D
Sbjct: 204 GNRHAQFQIAWDYNAGE-GVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQ-GVEKD 261
Query: 223 FEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGS 274
++ AF++ KA N++ +L MY G D ++A + +++ G+
Sbjct: 262 YQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGT 313
>sp|P77234|YBEQ_ECOLI Hypothetical protein ybeQ
Length = 325
Score = 85.5 bits (210), Expect = 8e-16
Identities = 75/272 (27%), Positives = 119/272 (43%), Gaps = 6/272 (2%)
Query: 35 EKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADD 94
+ A S + KA + K A G E LG Y + D ++A+ + K A
Sbjct: 38 DSAIDSPDDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGH 97
Query: 95 REGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVT 154
LG D G NY+EA+ Y A + NLG +Y D A+
Sbjct: 98 TFASNALGWTLDRG--EAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALA 155
Query: 155 Y--YQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLF 212
+ Y+++ + L YE G V Q+ A +YLK+ + + A + +
Sbjct: 156 FFWYKQAALQGHSDAQNNLADLYEDG-KGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDY 214
Query: 213 ENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDM 272
G+ G+D+D++ A + KA + G ++G MY G+ V+KD Q AF +F +A +
Sbjct: 215 NAGE-GVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAEC 273
Query: 273 GSAVSCSRMGFMYSQGDAVPKDLRKALDNYER 304
A + + MY G+ P DLR+ALD Y +
Sbjct: 274 NDATAWYNLAIMYHYGEGRPVDLRQALDLYRK 305
Score = 77.4 bits (189), Expect = 2e-13
Identities = 70/276 (25%), Positives = 114/276 (40%), Gaps = 13/276 (4%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNL 137
D +KA + K A + E + LG Y E ++ ++AI KA + H + L
Sbjct: 45 DDEKAFYWLKLAAEQGHCEAQYSLGQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNAL 104
Query: 138 GIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKAC 197
G DR N +AV +YQ + M+ LG Y G V + A +Y +A
Sbjct: 105 GWTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGN-GVAKDYALAFFWYKQAA 163
Query: 198 RLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKK 257
A L L+E+G AF YL K+ N + Y G V +
Sbjct: 164 LQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYL-KSAQQGNRHAQFQIAWDYNAGEGVDQ 222
Query: 258 DPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFAL 317
D ++A ++ +A GS + +G+MY G V KD + A + + + + D + L
Sbjct: 223 DYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYNL 282
Query: 318 AGMYYNMKDKENAIMIYDKGCKLGMKQACENLTKLR 353
A MY+ Y +G + ++QA + K++
Sbjct: 283 AIMYH-----------YGEGRPVDLRQALDLYRKVQ 307
Score = 73.6 bits (179), Expect = 3e-12
Identities = 57/232 (24%), Positives = 108/232 (45%), Gaps = 6/232 (2%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
+A + KKA G + LG + G+ +YK+A+ +Y+ A ++ LG +
Sbjct: 84 QAIFWLKKAALQGHTFASNALGWTLDRGEAP--NYKEAVVWYQIAAESGMSYAQNNLGWM 141
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNF 162
Y G G ++Y A Y +A + H ++ NL +Y+ + + N A +Y KS
Sbjct: 142 YRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQ 201
Query: 163 DMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDED 222
+ + Y G V Q +A+ +YLKA A +G ++++G G+++D
Sbjct: 202 GNRHAQFQIAWDYNAGE-GVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQ-GVEKD 259
Query: 223 FEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGS 274
++ AF++ KA N++ +L MY G D ++A + +++ G+
Sbjct: 260 YQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRKVQSSGT 311
>ref|NP_009492.1| (NC_001134) protoplast regeneration and killer toxin resistance
gene, may be a post-translational regulator of chitin
synthase III activity, interacts with Chs3p; Skt5p
[Saccharomyces cerevisiae]
sp|P34226|SKT5_YEAST SKT5 PROTEIN
pir||S39827 SKT5 protein - yeast (Saccharomyces cerevisiae)
emb|CAA80786.1| (Z23261) YBL0519 [Saccharomyces cerevisiae]
emb|CAA84882.1| (Z35823) ORF YBL061c [Saccharomyces cerevisiae]
Length = 696
Score = 84.7 bits (208), Expect = 1e-15
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 12/291 (4%)
Query: 33 VAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQA 92
V++ K +A SY KK G S+ L Y +G +I+ K+A ++ A +
Sbjct: 245 VSQSDLKLQFLKEAQSYLKKLSIKGYSDAQYLLADGYSSGAFGKIENKEAFVLFQAAAKH 304
Query: 93 DDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII---------YDR 143
E + +EGLGTT++ +++++ A HP + Y LG+ D
Sbjct: 305 GHIESAYRASHCLEEGLGTTRDSRKSVNFLKFAASRNHPSAMYKLGLYSFYGRMGLPTDV 364
Query: 144 KIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHK-AVIYYLKACRLDDG 202
K N + ++ N A Y L Y +GFL+V + K A+ Y++A L
Sbjct: 365 NTKLNGVKWLSRAAARANELTAAAPYELAKIYHEGFLDVVIPDEKYAMELYIQAASLGHV 424
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR--YVKKDPQ 260
+ L ++E G+ + +D ++ Y +A +S L + Y+LG +KD
Sbjct: 425 PSATLLAQIYETGNDTVGQDTSLSVHYYTQAALKGDSVAMLGLCAWYLLGAEPAFEKDEN 484
Query: 261 KAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDE 311
+AF + +A + G + +G+ Y G +++ A YE+ D+
Sbjct: 485 EAFQWALRAANAGLPKAQFTLGYFYEHGKGCDRNMEYAWKWYEKAAGNEDK 535
>gb|AAC60564.1| (S65415) protoplast regeneration and killer toxin resistance gene
[Saccharomyces cerevisiae]
Length = 664
Score = 84.0 bits (206), Expect = 2e-15
Identities = 70/291 (24%), Positives = 126/291 (43%), Gaps = 12/291 (4%)
Query: 33 VAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQA 92
V++ K +A SY KK G S+ L Y +G +I+ K+A ++ A +
Sbjct: 231 VSQSDLKLQFLKEAQSYLKKLSIKGYSDAQYLLADGYSSGAFGKIENKEAFVLFQAAAKH 290
Query: 93 DDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNL---------GIIYDR 143
E + +EGLGTT++ +++++ A HP + Y L G+ D
Sbjct: 291 GHIESAYRASHCLEEGLGTTRDSRKSVNFLKFAASRNHPSAMYKLELYSFYGRMGLPTDV 350
Query: 144 KIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHK-AVIYYLKACRLDDG 202
K N + ++ N A Y L Y +GFL+V + K A+ Y++A L
Sbjct: 351 NTKLNGVKWLSRAAARANELTAAAPYELAKIYHEGFLDVVIPDEKYAMELYIQAASLGHV 410
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR--YVKKDPQ 260
+ L ++E G+ + +D ++ Y +A +S L + Y+LG +KD
Sbjct: 411 PSATLLAQIYETGNDTVGQDTSLSVHYYTQAALKGDSVAMLGLCAWYLLGAEPAFEKDEN 470
Query: 261 KAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDE 311
+AF + +A + G + +G+ Y G +++ A YE+ D+
Sbjct: 471 EAFQWALRAANAGLPKAQFTLGYFYEHGKGCDRNMEYAWKWYEKAAGNEDK 521
>prf||1920224A skt5 gene [Saccharomyces cerevisiae]
prf||2009318A SKT5 gene [Saccharomyces cerevisiae]
Length = 533
Score = 84.0 bits (206), Expect = 2e-15
Identities = 69/284 (24%), Positives = 124/284 (43%), Gaps = 12/284 (4%)
Query: 33 VAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQA 92
V++ K +A SY KK G S+ L Y +G +I+ K+A ++ A +
Sbjct: 231 VSQSDLKLQFLKEAQSYLKKLSIKGYSDAQYLLADGYSSGAFGKIENKEAFVLFQAAAKH 290
Query: 93 DDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII---------YDR 143
E + +EGLGTT++ +++++ A HP + Y LG+ D
Sbjct: 291 GHIESAYRASHCLEEGLGTTRDSRKSVNFLKFAASRNHPSAMYKLGLYSFYGRMGLPTDV 350
Query: 144 KIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHK-AVIYYLKACRLDDG 202
K N + ++ N A Y L Y +GFL+V + K A+ Y++A L
Sbjct: 351 NTKLNGVKWLSRAAARANELTAAAPYELAKIYHEGFLDVVIPDEKYAMELYIQAASLGHV 410
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR--YVKKDPQ 260
+ L ++E G+ + +D ++ Y +A +S L + Y+LG +KD
Sbjct: 411 PSATLLAQIYETGNDTVGQDTSLSVHYYTQAALKGDSVAMLGLCAWYLLGAEPAFEKDEN 470
Query: 261 KAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYER 304
+AF + +A + G + +G+ Y G +++ A YE+
Sbjct: 471 EAFQWALRAANAGLPKAQFTLGYFYEHGKGCDRNMEYAWKWYEK 514
>gb|AAF45339.1| (AE003066) CG13865 gene product [Drosophila melanogaster]
gb|AAM52744.1| (AY122232) RE58665p [Drosophila melanogaster]
Length = 266
Score = 82.8 bits (203), Expect = 5e-15
Identities = 63/221 (28%), Positives = 99/221 (44%), Gaps = 38/221 (17%)
Query: 129 KHPESCYNLGIIYDRKIKGNADQAVTYYQKSCN-FDMAKGCYVLG--VAYEKGFLEVKQS 185
K PE+C+ LG Y IK + ++A Y+ +C+ + AK CY G KG K +
Sbjct: 30 KKPEACHLLGD-YLEGIKKDFEKASKVYKSTCDDYGYAKSCYKYGNYSFLGKGKSGSKGN 88
Query: 186 NHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEV--AFDYLQKACGLNNSGGCA 243
A YY K C L+D AC G L + + D+ V ++L K+C LNN+ C
Sbjct: 89 PQVAYEYYEKGCNLNDSDACLHSGLLLVSKSMPREIDWNVPKGLEFLTKSCDLNNATACF 148
Query: 244 SLGSMYMLGRYVK--------------------------------KDPQKAFNFFKQACD 271
L M++ G K KD +KAF F +AC+
Sbjct: 149 YLSGMHISGVQKKADQSAVTASSGSGTSSPPAGQPPLKDSDYIVLKDMKKAFQFAHKACE 208
Query: 272 MGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEV 312
+ + +C+ + MY++GD + K+ ++A + +M DEV
Sbjct: 209 LRNMYACANLSQMYARGDGIEKNEKEAEKYKKLALEMQDEV 249
Score = 77.0 bits (188), Expect = 3e-13
Identities = 66/245 (26%), Positives = 108/245 (43%), Gaps = 24/245 (9%)
Query: 60 EGCTQLGIIYENGQGTRIDYKKALEYYKTACQADD---REGCFGLGGLYDEGLGTTQ--- 113
E C LG E G + D++KA + YK+ C DD + C+ G G G +
Sbjct: 33 EACHLLGDYLE---GIKKDFEKASKVYKSTC--DDYGYAKSCYKYGNYSFLGKGKSGSKG 87
Query: 114 NYQEAIDAYAKACVLKHPESCYNLGIIY-----DRKIKGNADQAVTYYQKSCNFDMAKGC 168
N Q A + Y K C L ++C + G++ R+I N + + + KSC+ + A C
Sbjct: 88 NPQVAYEYYEKGCNLNDSDACLHSGLLLVSKSMPREIDWNVPKGLEFLTKSCDLNNATAC 147
Query: 169 YVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSL-FENGDAGLDEDFEVAF 227
+ L + G K+++ AV G + G ++ D + +D + AF
Sbjct: 148 FYLSGMHISGVQ--KKADQSAV-----TASSGSGTSSPPAGQPPLKDSDYIVLKDMKKAF 200
Query: 228 DYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQ 287
+ KAC L N CA+L MY G ++K+ ++A + K A +M V + Q
Sbjct: 201 QFAHKACELRNMYACANLSQMYARGDGIEKNEKEAEKYKKLALEMQDEVKKQHDTLGFQQ 260
Query: 288 GDAVP 292
G +P
Sbjct: 261 GVGMP 265
Score = 56.6 bits (135), Expect = 4e-07
Identities = 48/216 (22%), Positives = 84/216 (38%), Gaps = 48/216 (22%)
Query: 181 EVKQSNHKAVIYYLKACRLDDG-QACRALGSLFENGDAGLDEDFEVAFDYLQKACG-LNN 238
+VK+ K + Y C + +AC LG E G+ +DFE A + C
Sbjct: 10 DVKEYVEKLGVEYRFGCYSEKKPEACHLLGDYLE----GIKKDFEKASKVYKSTCDDYGY 65
Query: 239 SGGCASLGSMYMLGRYV---KKDPQKAFNFFKQACDMGSAVSCSRMGFMY---SQGDAVP 292
+ C G+ LG+ K +PQ A+ ++++ C++ + +C G + S +
Sbjct: 66 AKSCYKYGNYSFLGKGKSGSKGNPQVAYEYYEKGCNLNDSDACLHSGLLLVSKSMPREID 125
Query: 293 KDLRKALDNYERGCDMGDEVGCFALAGM-------------------------------- 320
++ K L+ + CD+ + CF L+GM
Sbjct: 126 WNVPKGLEFLTKSCDLNNATACFYLSGMHISGVQKKADQSAVTASSGSGTSSPPAGQPPL 185
Query: 321 ----YYNMKDKENAIMIYDKGCKLGMKQACENLTKL 352
Y +KD + A K C+L AC NL+++
Sbjct: 186 KDSDYIVLKDMKKAFQFAHKACELRNMYACANLSQM 221
Score = 46.2 bits (108), Expect = 6e-04
Identities = 43/164 (26%), Positives = 68/164 (41%), Gaps = 38/164 (23%)
Query: 29 SFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTR-IDYK--KALEY 85
SFLG + K GN A Y++K CN S+ C G++ + R ID+ K LE+
Sbjct: 76 SFLGKGKSGSK-GNPQVAYEYYEKGCNLNDSDACLHSGLLLVSKSMPREIDWNVPKGLEF 134
Query: 86 YKTACQADDREGCFGLGGLY---------------DEGLGTT-----------------Q 113
+C ++ CF L G++ G GT+ +
Sbjct: 135 LTKSCDLNNATACFYLSGMHISGVQKKADQSAVTASSGSGTSSPPAGQPPLKDSDYIVLK 194
Query: 114 NYQEAIDAYAKACVLKHPESCYNLGIIYDR--KIKGNADQAVTY 155
+ ++A KAC L++ +C NL +Y R I+ N +A Y
Sbjct: 195 DMKKAFQFAHKACELRNMYACANLSQMYARGDGIEKNEKEAEKY 238
>dbj|BAA19847.1| (AB003310) chitin synthase regulatory factor [Candida albicans]
Length = 687
Score = 82.8 bits (203), Expect = 5e-15
Identities = 69/290 (23%), Positives = 126/290 (42%), Gaps = 14/290 (4%)
Query: 35 EKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADD 94
EK K +A Y K+ + G E L Y +G +ID K+A +++A +
Sbjct: 350 EKKLKKALLKEAVKYLKRLSDKGYVEAQYLLADAYSSGALDKIDNKEAFILFQSAAKHGH 409
Query: 95 REGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGI--IYDR-----KIKG 147
E F Y+EGLGT ++ ++A++ A HP + Y LG+ Y R
Sbjct: 410 VESAFRTSFCYEEGLGTGRDSRKAVEFLKIAASRNHPAAMYKLGVYSFYGRMGLPANDMN 469
Query: 148 NADQAVTYYQKSCNFD---MAKGCYVLGVAYEKGFLEVKQSNHK-AVIYYLKACRLDDGQ 203
+ + ++ N A Y LG Y GF ++ + K + + +A L Q
Sbjct: 470 TKKMGIKWLTRAANVATELTAAAPYELGKLYYNGFEDIVLIDKKYGLELFAQAAALGHLQ 529
Query: 204 ACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR--YVKKDPQK 261
+ LG +E G+ + +D ++ Y +A + ++ + Y++G Y+ KD +
Sbjct: 530 SAAILGHHYEIGEI-VPQDSNLSIHYYTQAALGGDPNSMLAMCAWYLVGSEPYLPKDDNE 588
Query: 262 AFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDE 311
AF + K+A + + + Y +G K++ +A Y++ + GDE
Sbjct: 589 AFEWAKRAANCNLPKAQFALANFYEKGIGCIKNINEAQSWYKKAAENGDE 638
>gb|AAD41587.1|AF057704_3 (AF057704) enhanced entry protein EnhC [Legionella pneumophila]
Length = 1201
Score = 81.6 bits (200), Expect = 1e-14
Identities = 64/235 (27%), Positives = 110/235 (46%), Gaps = 8/235 (3%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
+Y+ A +++KA +S+ LG IYE +Y +AL+ Y+ A D G + L
Sbjct: 883 DYNLAKHWYQKAAKH-LSKADVALGFIYETVDD---NYAQALKAYENAAAKGDMLGAYNL 938
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKI--KGNADQAVTYYQKS 159
+Y+ G G NY +A+ + +A PE+ L +Y + N QA+ +Y+K+
Sbjct: 939 ALMYEYGKGVPVNYSKALSLFKEASEKGAPEAMSQLAGMYFYGLGQPRNEQQALVWYKKA 998
Query: 160 CNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGL 219
+ Y LG+ E G + VK A+ YY A + +A AL ++ G G+
Sbjct: 999 ASLGNGNALYALGLLSETG-VGVKLDFPDALRYYQDASDKGNEKAMLALARMYHYG-LGV 1056
Query: 220 DEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGS 274
++D + + QK N+ LG+ Y+ G ++ P+K +QA + GS
Sbjct: 1057 EKDHKRSASIYQKLAQKQNAYAQYQLGTYYIEGTAGERLPEKGRELLQQASENGS 1111
Score = 80.5 bits (197), Expect = 3e-14
Identities = 64/247 (25%), Positives = 112/247 (44%), Gaps = 8/247 (3%)
Query: 46 ATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLY 105
A ++ + G E LG Y+ G+ DY A +Y+ A + + LG +Y
Sbjct: 851 AQHWYTASAEQGNPEAQYLLGQFYQLGETGEPDYNLAKHWYQKAAKHLSKADV-ALGFIY 909
Query: 106 DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKSCNFD 163
+ NY +A+ AY A YNL ++Y+ + + N +A++ ++++
Sbjct: 910 ET---VDDNYAQALKAYENAAAKGDMLGAYNLALMYEYGKGVPVNYSKALSLFKEASEKG 966
Query: 164 MAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDF 223
+ L Y G L ++ +A+++Y KA L +G A ALG L E G G+ DF
Sbjct: 967 APEAMSQLAGMYFYG-LGQPRNEQQALVWYKKAASLGNGNALYALGLLSETG-VGVKLDF 1024
Query: 224 EVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGF 283
A Y Q A N +L MY G V+KD +++ + +++ +A + ++G
Sbjct: 1025 PDALRYYQDASDKGNEKAMLALARMYHYGLGVEKDHKRSASIYQKLAQKQNAYAQYQLGT 1084
Query: 284 MYSQGDA 290
Y +G A
Sbjct: 1085 YYIEGTA 1091
Score = 73.2 bits (178), Expect = 4e-12
Identities = 68/262 (25%), Positives = 107/262 (39%), Gaps = 12/262 (4%)
Query: 81 KALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII 140
+A E YK D+ L + +GLG + A Y + +PE+ Y LG
Sbjct: 814 QAKEIYKGLADKGDQYAQLKLAYMLQKGLGAAPDLAGAQHWYTASAEQGNPEAQYLLGQF 873
Query: 141 YDRKIKGNADQ--AVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACR 198
Y G D A +YQK+ ++K LG YE V + +A+ Y A
Sbjct: 874 YQLGETGEPDYNLAKHWYQKAAKH-LSKADVALGFIYET----VDDNYAQALKAYENAAA 928
Query: 199 LDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKD 258
D L ++E G G+ ++ A ++A + L MY G ++
Sbjct: 929 KGDMLGAYNLALMYEYGK-GVPVNYSKALSLFKEASEKGAPEAMSQLAGMYFYGLGQPRN 987
Query: 259 PQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALA 318
Q+A ++K+A +G+ + +G + G V D AL Y+ D G+E ALA
Sbjct: 988 EQQALVWYKKAASLGNGNALYALGLLSETGVGVKLDFPDALRYYQDASDKGNEKAMLALA 1047
Query: 319 GMYYN----MKDKENAIMIYDK 336
MY+ KD + + IY K
Sbjct: 1048 RMYHYGLGVEKDHKRSASIYQK 1069
Score = 52.8 bits (125), Expect = 6e-06
Identities = 71/313 (22%), Positives = 112/313 (35%), Gaps = 51/313 (16%)
Query: 55 NDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQN 114
+D G L I+ ++Y + Y + + F +G L+ G+G Q+
Sbjct: 459 DDDSEVGSFDLMDIWTGDWKRTVNYMSVVNYLYFRAILGNAQTQFEIGQLFQYGIGLMQD 518
Query: 115 YQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD--QAVTYYQKSCNFDMAKGCYVL- 171
AI Y A KH + YNLGI+Y ++ K D QA+ + S + YVL
Sbjct: 519 DASAIIFYENAAEQKHLGAEYNLGILYLKRGKDENDYQQALNWLTDSAFKGNKRAQYVLA 578
Query: 172 -----GVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS-LFENGDAGLDEDF-- 223
G+ G +K ++ +A+ + D G A L L + + GL D
Sbjct: 579 RILRQGIVGPDGKEYIKANDEQAMAMLYLSAANDYGPAEYELAEYLARDYNNGLSVDVRK 638
Query: 224 --------------------------------------EVAFDYLQKACGLNNSGGCASL 245
E AF ++ N L
Sbjct: 639 QKIALIRKLYQGAVKNKVAEALLPLAFYNAMDDNRQKQEQAFKVAEEQAETGNENAALLL 698
Query: 246 GSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERG 305
G +Y G + DP KA +++QA + VS +G ++G V +D K LD ++
Sbjct: 699 GMLYDRGIGITADPAKAMYWYQQAGQ--NPVSQFILGTYITEGKGVAQDKEKGLDLLKQS 756
Query: 306 CDMGDEVGCFALA 318
D F LA
Sbjct: 757 ADSQFSYADFNLA 769
>gb|AAK64159.1| (AY039982) unknown protein [Arabidopsis thaliana]
Length = 678
Score = 81.3 bits (199), Expect = 2e-14
Identities = 83/329 (25%), Positives = 124/329 (37%), Gaps = 57/329 (17%)
Query: 32 GVAEKAYKSG------------NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDY 79
G A YK+G +++KA +F KA + G LG IY G G +Y
Sbjct: 240 GNANAMYKNGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNY 299
Query: 80 KKALEYYKTACQADDREGCFGLGGLYDEGLGT-TQNYQEAIDAYAKACVLKHPESCYNLG 138
KALE+ A + G+G LY +G G +NY +A + + KA + P YNLG
Sbjct: 300 TKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLG 359
Query: 139 IIYDRKIKGNAD--QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKA 196
++Y + I N D QA Y+ + N K Y L + G K Y L A
Sbjct: 360 VLYLKGIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVA 419
Query: 197 CRLDDGQACRALGSLFENGDAG---------LDEDFEVAFD--------YLQKACGLNNS 239
R R + GD G + +EVA Y +++ + S
Sbjct: 420 ERGPWSSLSRWALEAYLKGDVGKALILYSRMAEMGYEVAQSNAAWILDKYGERSMCMGVS 479
Query: 240 GGCAS-------------------------LGSMYMLGRYVKKDPQKAFNFFKQACDMGS 274
G C +G Y GR ++D +A + A +
Sbjct: 480 GFCTDKERHERAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAYMHAKSQSN 539
Query: 275 AVSCSRMGFMYSQGDAVPKDLRKALDNYE 303
A + +G+M+ G +P DL A Y+
Sbjct: 540 AQAMFNLGYMHEHGQGLPFDLHLAKRYYD 568
Score = 55.1 bits (131), Expect = 1e-06
Identities = 48/217 (22%), Positives = 98/217 (45%), Gaps = 4/217 (1%)
Query: 135 YNLGIIYDRKIKG---NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVI 191
Y G+ Y ++G + +A+ ++ K+ + + +LG Y +G V+++ KA+
Sbjct: 246 YKNGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARG-AGVERNYTKALE 304
Query: 192 YYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYML 251
+ A + A +G L+ G +++ A +Y +KA + G +LG +Y+
Sbjct: 305 WLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLK 364
Query: 252 GRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDE 311
G V +D ++A +F A + G + ++ M+ G + K+L A Y+ + G
Sbjct: 365 GIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVAERGPW 424
Query: 312 VGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACEN 348
A Y D A+++Y + ++G + A N
Sbjct: 425 SSLSRWALEAYLKGDVGKALILYSRMAEMGYEVAQSN 461
>ref|NP_506144.1| (NM_073743) Yeast hypothetical gene L8167.5 like [Caenorhabditis
elegans]
pir||S68303 sel-1 protein - Caenorhabditis elegans
pir||T22223 sel-1 protein - Caenorhabditis elegans
gb|AAC47113.1| (U50829) SEL-1 [Caenorhabditis elegans]
emb|CAB01505.1| (Z78063) predicted using Genefinder~Similarity to Yeast predicted
gene L8167.5 (TR:G544502)~cDNA EST yk53e10.3 comes from
this gene~cDNA EST yk53e10.5 comes from this gene~cDNA
EST yk318c4.5 comes from this gene~cDNA EST yk342b8.3
comes from this gene~>
Length = 685
Score = 80.9 bits (198), Expect = 2e-14
Identities = 79/326 (24%), Positives = 129/326 (39%), Gaps = 34/326 (10%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGT-RIDYKKALEYYKTACQADDRE 96
Y + +A + F+ +G + LG ++ G G + + KAL YY + +
Sbjct: 146 YSRWSIQEAKTVFEDLEKNGSPDAQLALGFMHGAGIGVEKSNQAKALVYYMFSALGGNPL 205
Query: 97 GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDR-KIKGNADQAVTY 155
+G Y G+G QN + A+ Y K + G R ++ D +
Sbjct: 206 AQMAMGFRYSHGVGVPQNCETALSYYQKVAKTVVDNVKFTTGQTIQRLRLTDETDPTI-- 263
Query: 156 YQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENG 215
M G L E LE YY D A LG ++ G
Sbjct: 264 -------HMQPGSAPL----ESNLLE----------YYKMLADKGDTSAQLGLGQIYLAG 302
Query: 216 DAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR-YVKKDPQKAFNFFKQACDMGS 274
GL+++FE+AF YL A ++ LG MY+ G + KD QK+F + ++ D S
Sbjct: 303 GRGLNQNFELAFRYLLAAAESGSADALTYLGKMYLDGTPFTPKDYQKSFEYLMKSADKSS 362
Query: 275 AVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN--------MKD 326
+ + +G MY +G V K+ KAL D + G LA ++Y +D
Sbjct: 363 PSAQAVLGAMYMKGKGVKKNYEKALKLLTLSADKKNADGQMYLAELHYKGVPTNKGVHRD 422
Query: 327 KENAIMIYDKGCKLGMKQACENLTKL 352
+ ++ +Y + G A NL ++
Sbjct: 423 FKKSVKLYQLASQNGHILAYYNLAQM 448
Score = 62.0 bits (149), Expect = 1e-08
Identities = 67/285 (23%), Positives = 119/285 (41%), Gaps = 30/285 (10%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
+Y K+ Y K+ + LG +Y G+G + +Y+KAL+ + + +G L
Sbjct: 346 DYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALKLLTLSADKKNADGQMYL 405
Query: 102 GGLYDEGL----GTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQ 157
L+ +G+ G +++++++ Y A H + YNL ++ A T
Sbjct: 406 AELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQMH---------AAGTGVP 456
Query: 158 KSCNF--DMAKGCYVLGVAYEKGFLEVKQSNHK------AVIYYLKACRLDDGQACRALG 209
+SC+ D+ K G E+ L S +K A + YL L A L
Sbjct: 457 RSCSHAVDLFKSVAERGKWGER--LMEAHSAYKDNRVDEAAMKYLFMAELGYEVAQTNLA 514
Query: 210 SLFENGDAGL------DEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAF 263
+ + G+A D + E AF Q++ + LG Y G + D AF
Sbjct: 515 YILDRGEATSLFSGPKDNNMERAFLNWQRSANQEYAAARVKLGDYYYYGLGTEVDHSLAF 574
Query: 264 NFFKQACDM-GSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
+ +K A D G A + +G+M+ G+ + +DL A Y++ +
Sbjct: 575 SNYKMAVDRHGVAQAMFNLGYMHEVGEGITRDLYLAKRFYDQAIE 619
>gb|AAC47112.1| (U50828) sel-1 gene product [Caenorhabditis elegans]
Length = 685
Score = 80.9 bits (198), Expect = 2e-14
Identities = 79/326 (24%), Positives = 129/326 (39%), Gaps = 34/326 (10%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGT-RIDYKKALEYYKTACQADDRE 96
Y + +A + F+ +G + LG ++ G G + + KAL YY + +
Sbjct: 146 YSRWSIQEAKTVFEDLEKNGSPDAQLALGFMHGAGIGVEKSNQAKALVYYMFSALGGNPL 205
Query: 97 GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDR-KIKGNADQAVTY 155
+G Y G+G QN + A+ Y K + G R ++ D +
Sbjct: 206 AQMAMGFRYSHGVGVPQNCETALSYYQKVAKTVVDNVKFTTGQTIQRLRLTDETDPTI-- 263
Query: 156 YQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENG 215
M G L E LE YY D A LG ++ G
Sbjct: 264 -------HMQPGSAPL----ESNLLE----------YYKMLADKGDTSAQLGLGQIYLAG 302
Query: 216 DAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGR-YVKKDPQKAFNFFKQACDMGS 274
GL+++FE+AF YL A ++ LG MY+ G + KD QK+F + ++ D S
Sbjct: 303 GRGLNQNFELAFRYLLAAAESGSADALTYLGKMYLDGTPFTPKDYQKSFEYLMKSADKSS 362
Query: 275 AVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN--------MKD 326
+ + +G MY +G V K+ KAL D + G LA ++Y +D
Sbjct: 363 PSAQAVLGAMYMKGKGVKKNYEKALKLLTLSADKKNADGQMYLAELHYKGVPTNKGVHRD 422
Query: 327 KENAIMIYDKGCKLGMKQACENLTKL 352
+ ++ +Y + G A NL ++
Sbjct: 423 FKKSVKLYQLASQNGHILAYYNLAQM 448
Score = 62.0 bits (149), Expect = 1e-08
Identities = 67/285 (23%), Positives = 119/285 (41%), Gaps = 30/285 (10%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
+Y K+ Y K+ + LG +Y G+G + +Y+KAL+ + + +G L
Sbjct: 346 DYQKSFEYLMKSADKSSPSAQAVLGAMYMKGKGVKKNYEKALKLLTLSADKKNADGQMYL 405
Query: 102 GGLYDEGL----GTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQ 157
L+ +G+ G +++++++ Y A H + YNL ++ A T
Sbjct: 406 AELHYKGVPTNKGVHRDFKKSVKLYQLASQNGHILAYYNLAQMH---------AAGTGVP 456
Query: 158 KSCNF--DMAKGCYVLGVAYEKGFLEVKQSNHK------AVIYYLKACRLDDGQACRALG 209
+SC+ D+ K G E+ L S +K A + YL L A L
Sbjct: 457 RSCSHAVDLFKSVAERGKWGER--LMEAHSAYKDNRVDEAAMKYLFMAELGYEVAQTNLA 514
Query: 210 SLFENGDAGL------DEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAF 263
+ + G+A D + E AF Q++ + LG Y G + D AF
Sbjct: 515 YILDRGEATSLFSGPKDNNMERAFLNWQRSANQEYAAARVKLGDYYYYGLGTEVDHSLAF 574
Query: 264 NFFKQACDM-GSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
+ +K A D G A + +G+M+ G+ + +DL A Y++ +
Sbjct: 575 SNYKMAVDXHGVAQAMFNLGYMHEVGEGITRDLYLAKRFYDQAIE 619
>ref|NP_564049.1| (NM_101684) expressed protein [Arabidopsis thaliana]
gb|AAF78381.1|AC069551_14 (AC069551) T10O22.22 [Arabidopsis thaliana]
Length = 678
Score = 80.9 bits (198), Expect = 2e-14
Identities = 78/307 (25%), Positives = 118/307 (38%), Gaps = 45/307 (14%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
+++KA +F KA + G LG IY G G +Y KALE+ A + G+
Sbjct: 262 DHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNYTKALEWLTLAAKEGLYSAFNGI 321
Query: 102 GGLYDEGLGT-TQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD--QAVTYYQK 158
G LY +G G +NY +A + + KA + P YNLG++Y + I N D QA Y+
Sbjct: 322 GYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLKGIGVNRDVRQATKYFFV 381
Query: 159 SCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAG 218
+ N K Y L + G K Y L A R R + GD G
Sbjct: 382 AANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVAERGPWSSLSRWALEAYLKGDVG 441
Query: 219 ---------LDEDFEVAFD--------YLQKACGLNNSGGCAS----------------- 244
+ +EVA Y +++ + SG C
Sbjct: 442 KALILYSRMAEMGYEVAQSNAAWILDKYGERSMCMGVSGFCTDKERHERAHSLWWRASEQ 501
Query: 245 --------LGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLR 296
+G Y GR ++D +A + A +A + +G+M+ G +P DL
Sbjct: 502 GNEHAALLIGDAYYYGRGTERDFVRAAEAYMHAKSQSNAQAMFNLGYMHEHGQGLPFDLH 561
Query: 297 KALDNYE 303
A Y+
Sbjct: 562 LAKRYYD 568
Score = 70.1 bits (170), Expect = 4e-11
Identities = 71/293 (24%), Positives = 125/293 (42%), Gaps = 30/293 (10%)
Query: 57 GVSEGCTQLGIIYENG-QGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNY 115
G + ++G+ Y G +G R D+ KAL ++ A + LG +Y G G +NY
Sbjct: 240 GNANAMYKIGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARGAGVERNY 299
Query: 116 QEAIDAYAKACVLKHPESCYNLGIIYDRKI---KGNADQAVTYYQKSCNFDMAKGCYVLG 172
+A++ A + +G +Y + K N +A Y++K+ + + G Y LG
Sbjct: 300 TKALEWLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLG 359
Query: 173 VAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQK 232
V Y KG + V + +A Y+ A +A L +F G GL ++ E+A + +
Sbjct: 360 VLYLKG-IGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTG-VGLKKNLEMATSFYKL 417
Query: 233 ACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVP 292
G +SL S + L Y+K D KA + + +MG V+ S ++
Sbjct: 418 VA---ERGPWSSL-SRWALEAYLKGDVGKALILYSRMAEMGYEVAQSNAAWI-------- 465
Query: 293 KDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQA 345
LD Y G+ C ++G + + E A ++ + + G + A
Sbjct: 466 ------LDKY------GERSMCMGVSGFCTDKERHERAHSLWWRASEQGNEHA 506
Score = 57.0 bits (136), Expect = 3e-07
Identities = 48/217 (22%), Positives = 99/217 (45%), Gaps = 4/217 (1%)
Query: 135 YNLGIIYDRKIKG---NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVI 191
Y +G+ Y ++G + +A+ ++ K+ + + +LG Y +G V+++ KA+
Sbjct: 246 YKIGLFYYFGLRGLRRDHTKALHWFLKAVDKGEPRSMELLGEIYARG-AGVERNYTKALE 304
Query: 192 YYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYML 251
+ A + A +G L+ G +++ A +Y +KA + G +LG +Y+
Sbjct: 305 WLTLAAKEGLYSAFNGIGYLYVKGYGVDKKNYTKAREYFEKAVDNEDPSGHYNLGVLYLK 364
Query: 252 GRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDE 311
G V +D ++A +F A + G + ++ M+ G + K+L A Y+ + G
Sbjct: 365 GIGVNRDVRQATKYFFVAANAGQPKAFYQLAKMFHTGVGLKKNLEMATSFYKLVAERGPW 424
Query: 312 VGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACEN 348
A Y D A+++Y + ++G + A N
Sbjct: 425 SSLSRWALEAYLKGDVGKALILYSRMAEMGYEVAQSN 461
>ref|NP_455035.1| (NC_003198) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
emb|CAD08897.1| (AL627266) conserved hypothetical protein [Salmonella enterica
subsp. enterica serovar Typhi]
Length = 384
Score = 79.0 bits (193), Expect = 8e-14
Identities = 40/137 (29%), Positives = 69/137 (50%)
Query: 169 YVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFD 228
+++G Y+ GF+EV +++ ++ KA L A LG + NG G+ D +
Sbjct: 96 FIVGSLYDSGFVEVDDKEARSLQWFRKAAELGQADAQNILGYFYLNGKRGIKRDLQKGGQ 155
Query: 229 YLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQG 288
+ + A N +LG +Y G V D +AF FF++A MG + + + + +MY+ G
Sbjct: 156 WYELAAAQGNVDALINLGEIYYSGTRVPLDYARAFEFFERAAKMGKSRALNYLAWMYTNG 215
Query: 289 DAVPKDLRKALDNYERG 305
V D RKA + + +G
Sbjct: 216 QFVDTDCRKAAELFAQG 232
Score = 57.0 bits (136), Expect = 3e-07
Identities = 35/117 (29%), Positives = 58/117 (48%), Gaps = 1/117 (0%)
Query: 208 LGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLG-RYVKKDPQKAFNFF 266
+GSL+++G +D+ + + +KA L + LG Y+ G R +K+D QK ++
Sbjct: 98 VGSLYDSGFVEVDDKEARSLQWFRKAAELGQADAQNILGYFYLNGKRGIKRDLQKGGQWY 157
Query: 267 KQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN 323
+ A G+ + +G +Y G VP D +A + +ER MG LA MY N
Sbjct: 158 ELAAAQGNVDALINLGEIYYSGTRVPLDYARAFEFFERAAKMGKSRALNYLAWMYTN 214
>gb|AAF01236.1|AF185288_1 (AF185288) immunoreactive protein [Coxiella burnetii]
Length = 469
Score = 78.2 bits (191), Expect = 1e-13
Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 7/252 (2%)
Query: 80 KKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGI 139
KKA+ Y+ D LG + + GL ++Y +A + Y K+ +P + Y LG
Sbjct: 214 KKAVAIYQELANKQDPAAELKLGFMNEHGLLFPKDYHKAEEWYQKSAEQGNPIAQYLLGN 273
Query: 140 IY--DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKAC 197
+Y R + + ++A+ + +KS + LG YE K + +A +Y A
Sbjct: 274 MYYLGRGVDRDVNKAIDWLKKSAAQNYVPAKVGLGFIYEMS----KHNYPEAKKWYTLAS 329
Query: 198 RLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKK 257
+ + QA LG ++E G G+ D + AF + A + MY+ G +
Sbjct: 330 KFHNPQALYNLGLMYEYGK-GVKSDPQKAFRLYKDAAQNGLDLAAVQVAGMYLKGTGIGF 388
Query: 258 DPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFAL 317
DP A + QA ++ + ++G M G A DL KA YE+ G AL
Sbjct: 389 DPNTALKMYSQAAQKNNSFATYQLGLMSESGVAQKIDLNKARLYYEKAAKEGSVEAQLAL 448
Query: 318 AGMYYNMKDKEN 329
A Y K +E+
Sbjct: 449 ARFYEFSKTRES 460
Score = 72.8 bits (177), Expect = 6e-12
Identities = 81/346 (23%), Positives = 131/346 (37%), Gaps = 69/346 (19%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
N+ KA + ++KA G+ + LG Y T + +K E + A Q +D E L
Sbjct: 38 NWKKAYALYQKAAKSGLEKADVALGYFYLQQNQTTLA-EKTFEIAQKAYQTNDPEAAMLL 96
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCN 161
LYD G G +N +++ + K + + + LG Y K K + A++ +KS N
Sbjct: 97 AILYDRGFGVNRNSRKSAEILEKLSKQNNAIAQFMLGNYY-LKNKRKENIAISLLEKSAN 155
Query: 162 FDMAKGCYVLGVAYEKG----------FLEVKQSNH-----------------------K 188
Y L + ++ L ++ +NH K
Sbjct: 156 QGNGYAKYNLAILAKQNKYTKPGENFLSLLIRAANHYDKIKEILADYYLLDTPVPGSEKK 215
Query: 189 AVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSM 248
AV Y + D A LG + E+G +D+ A ++ QK+ N LG+M
Sbjct: 216 AVAIYQELANKQDPAAELKLGFMNEHG-LLFPKDYHKAEEWYQKSAEQGNPIAQYLLGNM 274
Query: 249 YMLGRYVKKDPQKAFNFFKQAC---------DMGSAVSCSR------------------- 280
Y LGR V +D KA ++ K++ +G S+
Sbjct: 275 YYLGRGVDRDVNKAIDWLKKSAAQNYVPAKVGLGFIYEMSKHNYPEAKKWYTLASKFHNP 334
Query: 281 -----MGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
+G MY G V D +KA Y+ G ++ +AGMY
Sbjct: 335 QALYNLGLMYEYGKGVKSDPQKAFRLYKDAAQNGLDLAAVQVAGMY 380
Score = 71.6 bits (174), Expect = 1e-11
Identities = 85/369 (23%), Positives = 134/369 (36%), Gaps = 80/369 (21%)
Query: 51 KKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLG 110
+KA E L I+Y+ G G + +K+ E + + ++ F LG Y L
Sbjct: 82 QKAYQTNDPEAAMLLAILYDRGFGVNRNSRKSAEILEKLSKQNNAIAQFMLGNYY---LK 138
Query: 111 TTQNYQEAIDAYAKACVLKHPESCYNLGII------------------------------ 140
+ AI K+ + + YNL I+
Sbjct: 139 NKRKENIAISLLEKSANQGNGYAKYNLAILAKQNKYTKPGENFLSLLIRAANHYDKIKEI 198
Query: 141 ------YDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYL 194
D + G+ +AV YQ+ N LG E G L K HKA +Y
Sbjct: 199 LADYYLLDTPVPGSEKKAVAIYQELANKQDPAAELKLGFMNEHGLLFPKDY-HKAEEWYQ 257
Query: 195 KACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLN----------------- 237
K+ + A LG+++ G G+D D A D+L+K+ N
Sbjct: 258 KSAEQGNPIAQYLLGNMYYLG-RGVDRDVNKAIDWLKKSAAQNYVPAKVGLGFIYEMSKH 316
Query: 238 ----------------NSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRM 281
N +LG MY G+ VK DPQKAF +K A G ++ ++
Sbjct: 317 NYPEAKKWYTLASKFHNPQALYNLGLMYEYGKGVKSDPQKAFRLYKDAAQNGLDLAAVQV 376
Query: 282 GFMYSQGDAVPKDLRKALDNYERGCDMGD-----EVGCFALAGMYYNMKDKENAIMIYDK 336
MY +G + D AL Y + + ++G + +G+ + D A + Y+K
Sbjct: 377 AGMYLKGTGIGFDPNTALKMYSQAAQKNNSFATYQLGLMSESGVAQKI-DLNKARLYYEK 435
Query: 337 GCKLGMKQA 345
K G +A
Sbjct: 436 AAKEGSVEA 444
Score = 52.4 bits (124), Expect = 8e-06
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 2/137 (1%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
NY +A ++ A + LG++YE G+G + D +KA YK A Q +
Sbjct: 317 NYPEAKKWYTLASKFHNPQALYNLGLMYEYGKGVKSDPQKAFRLYKDAAQNGLDLAAVQV 376
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKI--KGNADQAVTYYQKS 159
G+Y +G G + A+ Y++A + + Y LG++ + + K + ++A YY+K+
Sbjct: 377 AGMYLKGTGIGFDPNTALKMYSQAAQKNNSFATYQLGLMSESGVAQKIDLNKARLYYEKA 436
Query: 160 CNFDMAKGCYVLGVAYE 176
+ L YE
Sbjct: 437 AKEGSVEAQLALARFYE 453
>pir||T46587 hypothetical protein [imported] - Vogesella indigofera
gb|AAD54009.1|AF088857_1 (AF088857) hypothetical protein [Vogesella indigofera]
Length = 268
Score = 77.4 bits (189), Expect = 2e-13
Identities = 60/219 (27%), Positives = 101/219 (45%), Gaps = 4/219 (1%)
Query: 53 ACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTT 112
A G + +LG+ YE G G D+ KA +Y+ A E L LY G G
Sbjct: 39 AAEQGDANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGVN 98
Query: 113 QNYQEAIDAYAKACVLKHPESCYNLG--IIYDRKIKGNADQAVTYYQKSCNFDMAKGCYV 170
QN EA+ + KA E+ NLG ++ + N D+AV + +K+ Y
Sbjct: 99 QNDAEALAWFRKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADYN 158
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
L + +G + Q + AV + K A LG +++ G G+ +D+++A +L
Sbjct: 159 LAIMMREG-RGLPQDDAAAVALFRKVAEQGVAIAQSNLGLMYKLG-RGVAQDYQLALSWL 216
Query: 231 QKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQA 269
+K ++ A+LG +Y+ G+ V +D +A +F+ A
Sbjct: 217 RKGVAQKSAMAQANLGVLYLEGKGVAQDDNEAVVWFRLA 255
Score = 72.0 bits (175), Expect = 1e-11
Identities = 55/215 (25%), Positives = 101/215 (46%), Gaps = 4/215 (1%)
Query: 87 KTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRK 144
+ A + D F LG Y++G G Q++ +A Y +A PE+ NL ++Y +
Sbjct: 37 QVAAEQGDANAQFRLGVRYEKGSGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQG 96
Query: 145 IKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQA 204
+ N +A+ +++K+ A+ LG G +++ +AV++ KA A
Sbjct: 97 VNQNDAEALAWFRKAATQGQAEAQLNLGAMLMNG-QGTPKNDDEAVVWTRKAAAQGQLMA 155
Query: 205 CRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFN 264
L + G GL +D A +K + ++LG MY LGR V +D Q A +
Sbjct: 156 DYNLAIMMREG-RGLPQDDAAAVALFRKVAEQGVAIAQSNLGLMYKLGRGVAQDYQLALS 214
Query: 265 FFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKAL 299
+ ++ SA++ + +G +Y +G V +D +A+
Sbjct: 215 WLRKGVAQKSAMAQANLGVLYLEGKGVAQDDNEAV 249
Score = 43.1 bits (100), Expect = 0.005
Identities = 38/158 (24%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 196 ACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYV 255
A D A LG +E G +G+ +DF A + ++A +L +Y+ G+ V
Sbjct: 39 AAEQGDANAQFRLGVRYEKG-SGVPQDFAKAATWYRQAATQGMPEAQNNLAVLYLNGQGV 97
Query: 256 KKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCF 315
++ +A +F++A G A + +G M G PK+ +A+ + G + +
Sbjct: 98 NQNDAEALAWFRKAATQGQAEAQLNLGAMLMNGQGTPKNDDEAVVWTRKAAAQGQLMADY 157
Query: 316 ALAGMYYN----MKDKENAIMIYDKGCKLGMKQACENL 349
LA M +D A+ ++ K + G+ A NL
Sbjct: 158 NLAIMMREGRGLPQDDAAAVALFRKVAEQGVAIAQSNL 195
>ref|NP_420846.1| (NC_002696) conserved hypothetical protein [Caulobacter crescentus
CB15]
gb|AAK24014.1| (AE005877) conserved hypothetical protein [Caulobacter crescentus
CB15]
Length = 330
Score = 76.3 bits (186), Expect = 5e-13
Identities = 64/260 (24%), Positives = 107/260 (40%), Gaps = 5/260 (1%)
Query: 51 KKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGL- 109
++A G + L I + G+G D K L + + A D + LG LY G
Sbjct: 44 ERAAEGGDTSFYVDLAICHIRGEGREPDVAKGLVWLRKAVALGDTDAMVELGNLYLFGAE 103
Query: 110 GTTQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKG 167
G + A+ YA+A L P + +N+ +++ + N A +Y +S +A G
Sbjct: 104 GLAVDAPGAVKLYARAARLGDPNAMFNMAVMHRGGYGLPENPRLARAWYLRSGEAGLAAG 163
Query: 168 CYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAF 227
+ GVA +G+ + + V++ +A + +A LG L G G+ D + A
Sbjct: 164 AFGAGVALLEGY-GGRSDARRGVLWLRRAIEMGSAEAMNELGRLHAEG-LGVSSDSDKAL 221
Query: 228 DYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQ 287
+ + A LG+ + GR ++ A +F+ A D G + +G M
Sbjct: 222 YFYRAAARNELPDAMYRLGAAHYNGRLTDRNYVVAMRWFQLAADRGDYDAWFALGVMCET 281
Query: 288 GDAVPKDLRKALDNYERGCD 307
G V D AL Y R D
Sbjct: 282 GRGVKSDRELALQMYRRAAD 301
Score = 50.4 bits (119), Expect = 3e-05
Identities = 48/185 (25%), Positives = 81/185 (42%), Gaps = 12/185 (6%)
Query: 46 ATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLY 105
A +++ ++ G++ G G+ G G R D ++ + + + A + E LG L+
Sbjct: 148 ARAWYLRSGEAGLAAGAFGAGVALLEGYGGRSDARRGVLWLRRAIEMGSAEAMNELGRLH 207
Query: 106 DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFD 163
EGLG + + +A+ Y A + P++ Y LG + R N A+ ++Q + +
Sbjct: 208 AEGLGVSSDSDKALYFYRAAARNELPDAMYRLGAAHYNGRLTDRNYVVAMRWFQLAADRG 267
Query: 164 MAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD----GQACRALGSLFENGDAGL 219
+ LGV E G VK A+ Y +A D +A RA+ L GL
Sbjct: 268 DYDAWFALGVMCETG-RGVKSDRELALQMYRRAADSDQPAVRDKAQRAIDRLL-----GL 321
Query: 220 DEDFE 224
ED E
Sbjct: 322 AEDDE 326
Score = 46.6 bits (109), Expect = 4e-04
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 4/190 (2%)
Query: 46 ATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLY 105
A + +A G + +++ G G + + A +Y + +A G FG G
Sbjct: 112 AVKLYARAARLGDPNAMFNMAVMHRGGYGLPENPRLARAWYLRSGEAGLAAGAFGAGVAL 171
Query: 106 DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDR--KIKGNADQAVTYYQKSCNFD 163
EG G + + + +A + E+ LG ++ + ++D+A+ +Y+ + +
Sbjct: 172 LEGYGGRSDARRGVLWLRRAIEMGSAEAMNELGRLHAEGLGVSSDSDKALYFYRAAARNE 231
Query: 164 MAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDF 223
+ Y LG A+ G L ++ A+ ++ A D A ALG + E G G+ D
Sbjct: 232 LPDAMYRLGAAHYNGRL-TDRNYVVAMRWFQLAADRGDYDAWFALGVMCETG-RGVKSDR 289
Query: 224 EVAFDYLQKA 233
E+A ++A
Sbjct: 290 ELALQMYRRA 299
Score = 42.4 bits (98), Expect = 0.008
Identities = 33/135 (24%), Positives = 60/135 (44%), Gaps = 1/135 (0%)
Query: 189 AVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSM 248
AV Y +A RL D A + ++ G GL E+ +A + ++ + G G
Sbjct: 112 AVKLYARAARLGDPNAMFNM-AVMHRGGYGLPENPRLARAWYLRSGEAGLAAGAFGAGVA 170
Query: 249 YMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDM 308
+ G + D ++ + ++A +MGSA + + +G ++++G V D KAL Y
Sbjct: 171 LLEGYGGRSDARRGVLWLRRAIEMGSAEAMNELGRLHAEGLGVSSDSDKALYFYRAAARN 230
Query: 309 GDEVGCFALAGMYYN 323
+ L +YN
Sbjct: 231 ELPDAMYRLGAAHYN 245
>ref|XP_131544.1| (XM_131544) RIKEN cDNA 2010305A19 [Mus musculus]
gb|AAH12391.1|AAH12391 (BC012391) Similar to hypothetical protein FLJ12439 [Mus musculus]
Length = 231
Score = 74.3 bits (181), Expect = 2e-12
Identities = 55/177 (31%), Positives = 78/177 (43%), Gaps = 8/177 (4%)
Query: 129 KHPESCYNLGIIYDRKIKGNADQAVTYYQKSCN-FDMAKGCYVLGVAYEKGFLEVKQSNH 187
K PE CY L + Y I+ N D+A + +C + CY LG Y G + Q
Sbjct: 32 KDPEGCYRL-VDYLEGIQKNFDEAAKVLKFNCEKYGHGDSCYKLGAYYVTGKGGLTQDLK 90
Query: 188 KAVIYYLKACRLDDG---QACRALGSLFENGDAGLD--EDFEVAFDYLQKACGLNNSGGC 242
A +L AC ++C +G L +G D D A DY +AC + C
Sbjct: 91 AASSCFLMACEKPGKKSVESCHNVGLLAHDGQVNEDGQPDLGKARDYYSRACDGGYAASC 150
Query: 243 ASLGSMYMLGRY-VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKA 298
+L +M++ G KD A + +ACD+G +C+ MY GD V KD KA
Sbjct: 151 FNLSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWACANASRMYKLGDGVDKDEAKA 207
Score = 64.3 bits (155), Expect = 2e-09
Identities = 60/200 (30%), Positives = 83/200 (41%), Gaps = 23/200 (11%)
Query: 80 KKALEYYKTAC-----QADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACV-LKHPES 133
K LE + C + D EGC+ L + G +N+ EA C H +S
Sbjct: 14 KSFLENMEVECHYQCYREKDPEGCYRLVDYLE---GIQKNFDEAAKVLKFNCEKYGHGDS 70
Query: 134 CYNLGIIYDRKIKGNADQ----AVTYYQKSCNFDMAKG---CYVLGVAYEKGFLEVKQSN 186
CY LG Y KG Q A + + +C K C+ +G+ G +V +
Sbjct: 71 CYKLGAYYVTG-KGGLTQDLKAASSCFLMACEKPGKKSVESCHNVGLLAHDG--QVNEDG 127
Query: 187 H----KAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
KA YY +AC +C L ++F G G +D +A Y KAC L + C
Sbjct: 128 QPDLGKARDYYSRACDGGYAASCFNLSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWAC 187
Query: 243 ASLGSMYMLGRYVKKDPQKA 262
A+ MY LG V KD KA
Sbjct: 188 ANASRMYKLGDGVDKDEAKA 207
Score = 63.5 bits (153), Expect = 3e-09
Identities = 49/164 (29%), Positives = 75/164 (44%), Gaps = 12/164 (7%)
Query: 166 KGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEV 225
+GCY L V Y +G K + A + + G +C LG+ + G GL +D +
Sbjct: 35 EGCYRL-VDYLEGIQ--KNFDEAAKVLKFNCEKYGHGDSCYKLGAYYVTGKGGLTQDLKA 91
Query: 226 AFDYLQKAC---GLNNSGGCASLGSMYMLGRYVKKDPQ----KAFNFFKQACDMGSAVSC 278
A AC G + C ++G + G+ V +D Q KA +++ +ACD G A SC
Sbjct: 92 ASSCFLMACEKPGKKSVESCHNVGLLAHDGQ-VNEDGQPDLGKARDYYSRACDGGYAASC 150
Query: 279 SRMGFMYSQG-DAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
+ M+ QG PKD+ A + CD+G C + MY
Sbjct: 151 FNLSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWACANASRMY 194
Score = 60.1 bits (144), Expect = 4e-08
Identities = 58/190 (30%), Positives = 82/190 (42%), Gaps = 24/190 (12%)
Query: 177 KGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGL 236
K FLE N + +Y + R D + C L E G+ ++F+ A L+ C
Sbjct: 14 KSFLE----NMEVECHY-QCYREKDPEGCYRLVDYLE----GIQKNFDEAAKVLKFNCEK 64
Query: 237 NNSG-GCASLGSMYMLGRY-VKKDPQKAFNFFKQACDMG---SAVSCSRMGFMYSQG--- 288
G C LG+ Y+ G+ + +D + A + F AC+ S SC +G + G
Sbjct: 65 YGHGDSCYKLGAYYVTGKGGLTQDLKAASSCFLMACEKPGKKSVESCHNVGLLAHDGQVN 124
Query: 289 -DAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN-----MKDKENAIMIYDKGCKLGM 342
D P DL KA D Y R CD G CF L+ M+ KD A K C LG
Sbjct: 125 EDGQP-DLGKARDYYSRACDGGYAASCFNLSAMFLQGAPGFPKDMGLACKYSMKACDLGH 183
Query: 343 KQACENLTKL 352
AC N +++
Sbjct: 184 VWACANASRM 193
Score = 43.5 bits (101), Expect = 0.004
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 11/134 (8%)
Query: 19 NAHLWGKQDNSF-LGVAEKAYKSG---NYSKATSYFKKACNDGVS---EGCTQLGIIYEN 71
N +G D+ + LG K G + A+S F AC E C +G++ +
Sbjct: 61 NCEKYGHGDSCYKLGAYYVTGKGGLTQDLKAASSCFLMACEKPGKKSVESCHNVGLLAHD 120
Query: 72 GQGT---RIDYKKALEYYKTACQADDREGCFGLGGLYDEGL-GTTQNYQEAIDAYAKACV 127
GQ + D KA +YY AC CF L ++ +G G ++ A KAC
Sbjct: 121 GQVNEDGQPDLGKARDYYSRACDGGYAASCFNLSAMFLQGAPGFPKDMGLACKYSMKACD 180
Query: 128 LKHPESCYNLGIIY 141
L H +C N +Y
Sbjct: 181 LGHVWACANASRMY 194
>gb|AAH15313.1|AAH15313 (BC015313) hypothetical protein FLJ12439 [Homo sapiens]
Length = 231
Score = 74.3 bits (181), Expect = 2e-12
Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 129 KHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDM-AKGCYVLGVAYEKGFLEVKQSNH 187
K P+ CY L + Y I+ N D+A + +C + + CY LG Y G + Q
Sbjct: 32 KDPDGCYRL-VDYLEGIRKNFDEAAKVLKFNCEENQHSDSCYKLGAYYVTGKGGLTQDLK 90
Query: 188 KAVIYYLKACRLDDGQ---ACRALGSLFENGDAGLD--EDFEVAFDYLQKACGLNNSGGC 242
A +L AC + AC +G L +G D D A DY +AC + C
Sbjct: 91 AAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRACDGGYTSSC 150
Query: 243 ASLGSMYMLGRY-VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKA 298
+L +M++ G KD A + +ACD+G +C+ MY GD V KD KA
Sbjct: 151 FNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRMYKLGDGVDKDEAKA 207
Score = 65.1 bits (157), Expect = 1e-09
Identities = 55/181 (30%), Positives = 78/181 (42%), Gaps = 18/181 (9%)
Query: 94 DREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVL-KHPESCYNLGIIYDRKIKGNADQ- 151
D +GC+ L + G +N+ EA C +H +SCY LG Y KG Q
Sbjct: 33 DPDGCYRLVDYLE---GIRKNFDEAAKVLKFNCEENQHSDSCYKLGAYYVTG-KGGLTQD 88
Query: 152 ---AVTYYQKSCNFDMAKG---CYVLGVAYEKGFLEVKQSNH----KAVIYYLKACRLDD 201
A + +C K C+ +G+ G +V + KA YY +AC
Sbjct: 89 LKAAARCFLMACEKPGKKSIAACHNVGLLAHDG--QVNEDGQPDLGKARDYYTRACDGGY 146
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
+C L ++F G G +D ++A Y KAC L + CA+ MY LG V KD K
Sbjct: 147 TSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRMYKLGDGVDKDEAK 206
Query: 262 A 262
A
Sbjct: 207 A 207
Score = 58.9 bits (141), Expect = 8e-08
Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 177 KGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGL 236
K FLE + Y+ K D C L E G+ ++F+ A L+ C
Sbjct: 14 KSFLENMEVECNYHCYHEK-----DPDGCYRLVDYLE----GIRKNFDEAAKVLKFNCEE 64
Query: 237 N-NSGGCASLGSMYMLGRY-VKKDPQKAFNFFKQACDMG---SAVSCSRMGFMYSQG--- 288
N +S C LG+ Y+ G+ + +D + A F AC+ S +C +G + G
Sbjct: 65 NQHSDSCYKLGAYYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVN 124
Query: 289 -DAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN-----MKDKENAIMIYDKGCKLGM 342
D P DL KA D Y R CD G CF L+ M+ KD + A K C LG
Sbjct: 125 EDGQP-DLGKARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGH 183
Query: 343 KQACENLTKL 352
AC N +++
Sbjct: 184 IWACANASRM 193
Score = 56.6 bits (135), Expect = 4e-07
Identities = 47/163 (28%), Positives = 71/163 (42%), Gaps = 12/163 (7%)
Query: 167 GCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVA 226
GCY L V Y +G K + A + +C LG+ + G GL +D + A
Sbjct: 36 GCYRL-VDYLEGIR--KNFDEAAKVLKFNCEENQHSDSCYKLGAYYVTGKGGLTQDLKAA 92
Query: 227 FDYLQKAC---GLNNSGGCASLGSMYMLGRYVKKDPQ----KAFNFFKQACDMGSAVSCS 279
AC G + C ++G + G+ V +D Q KA +++ +ACD G SC
Sbjct: 93 ARCFLMACEKPGKKSIAACHNVGLLAHDGQ-VNEDGQPDLGKARDYYTRACDGGYTSSCF 151
Query: 280 RMGFMYSQG-DAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
+ M+ QG PKD+ A + CD+G C + MY
Sbjct: 152 NLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRMY 194
>ref|NP_075565.1| (NM_023077) hypothetical protein FLJ12439 [Homo sapiens]
dbj|BAB14063.1| (AK022501) unnamed protein product [Homo sapiens]
Length = 231
Score = 74.3 bits (181), Expect = 2e-12
Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 8/177 (4%)
Query: 129 KHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDM-AKGCYVLGVAYEKGFLEVKQSNH 187
K P+ CY L + Y I+ N D+A + +C + + CY LG Y G + Q
Sbjct: 32 KDPDGCYRL-VDYLEGIRKNFDEAAKVLKFNCEENQHSDSCYKLGAHYVTGKGGLTQDLK 90
Query: 188 KAVIYYLKACRLDDGQ---ACRALGSLFENGDAGLD--EDFEVAFDYLQKACGLNNSGGC 242
A +L AC + AC +G L +G D D A DY +AC + C
Sbjct: 91 AAARCFLMACEKPGKKSIAACHNVGLLAHDGQVNEDGQPDLGKARDYYTRACDGGYTSSC 150
Query: 243 ASLGSMYMLGRY-VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKA 298
+L +M++ G KD A + +ACD+G +C+ MY GD V KD KA
Sbjct: 151 FNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRMYKLGDGVDKDEAKA 207
Score = 64.3 bits (155), Expect = 2e-09
Identities = 55/181 (30%), Positives = 78/181 (42%), Gaps = 18/181 (9%)
Query: 94 DREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVL-KHPESCYNLGIIYDRKIKGNADQ- 151
D +GC+ L + G +N+ EA C +H +SCY LG Y KG Q
Sbjct: 33 DPDGCYRLVDYLE---GIRKNFDEAAKVLKFNCEENQHSDSCYKLGAHYVTG-KGGLTQD 88
Query: 152 ---AVTYYQKSCNFDMAKG---CYVLGVAYEKGFLEVKQSNH----KAVIYYLKACRLDD 201
A + +C K C+ +G+ G +V + KA YY +AC
Sbjct: 89 LKAAARCFLMACEKPGKKSIAACHNVGLLAHDG--QVNEDGQPDLGKARDYYTRACDGGY 146
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
+C L ++F G G +D ++A Y KAC L + CA+ MY LG V KD K
Sbjct: 147 TSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRMYKLGDGVDKDEAK 206
Query: 262 A 262
A
Sbjct: 207 A 207
Score = 58.5 bits (140), Expect = 1e-07
Identities = 57/190 (30%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 177 KGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGL 236
K FLE + Y+ K D C L E G+ ++F+ A L+ C
Sbjct: 14 KSFLENMEVECNYHCYHEK-----DPDGCYRLVDYLE----GIRKNFDEAAKVLKFNCEE 64
Query: 237 N-NSGGCASLGSMYMLGRY-VKKDPQKAFNFFKQACDMG---SAVSCSRMGFMYSQG--- 288
N +S C LG+ Y+ G+ + +D + A F AC+ S +C +G + G
Sbjct: 65 NQHSDSCYKLGAHYVTGKGGLTQDLKAAARCFLMACEKPGKKSIAACHNVGLLAHDGQVN 124
Query: 289 -DAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN-----MKDKENAIMIYDKGCKLGM 342
D P DL KA D Y R CD G CF L+ M+ KD + A K C LG
Sbjct: 125 EDGQP-DLGKARDYYTRACDGGYTSSCFNLSAMFLQGAPGFPKDMDLACKYSMKACDLGH 183
Query: 343 KQACENLTKL 352
AC N +++
Sbjct: 184 IWACANASRM 193
Score = 55.8 bits (133), Expect = 7e-07
Identities = 47/163 (28%), Positives = 71/163 (42%), Gaps = 12/163 (7%)
Query: 167 GCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVA 226
GCY L V Y +G K + A + +C LG+ + G GL +D + A
Sbjct: 36 GCYRL-VDYLEGIR--KNFDEAAKVLKFNCEENQHSDSCYKLGAHYVTGKGGLTQDLKAA 92
Query: 227 FDYLQKAC---GLNNSGGCASLGSMYMLGRYVKKDPQ----KAFNFFKQACDMGSAVSCS 279
AC G + C ++G + G+ V +D Q KA +++ +ACD G SC
Sbjct: 93 ARCFLMACEKPGKKSIAACHNVGLLAHDGQ-VNEDGQPDLGKARDYYTRACDGGYTSSCF 151
Query: 280 RMGFMYSQG-DAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
+ M+ QG PKD+ A + CD+G C + MY
Sbjct: 152 NLSAMFLQGAPGFPKDMDLACKYSMKACDLGHIWACANASRMY 194
>ref|NP_496487.1| (NM_064086) ZK20.4.p [Caenorhabditis elegans]
pir||T27773 hypothetical protein ZK20.4 - Caenorhabditis elegans
emb|CAA93779.1| (Z69904) cDNA EST yk428d5.3 comes from this gene~cDNA EST yk428d5.5
comes from this gene~cDNA EST yk537a3.3 comes from this
gene~cDNA EST yk621h11.3 comes from this gene~cDNA EST
yk537a3.5 comes from this gene~cDNA EST yk621h11.5 comes
from this gene [>
Length = 249
Score = 73.9 bits (180), Expect = 3e-12
Identities = 55/191 (28%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 129 KHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDM-AKGCYVLGVAYEKGFLEVKQSNH 187
K PESC LG Y ++ N AV ++K+C+ + K C+ G+ G + S
Sbjct: 35 KRPESCQLLGE-YMEALQQNFQAAVAIFKKNCDENSYPKSCFKYGMYMLAGKVGDDASLS 93
Query: 188 KAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGS 247
K + AC + Q CR L + NG+ D E A Y+++AC L + C L +
Sbjct: 94 KMIRPMKIACDANIPQGCRYLSLVHWNGEKDRKADSEKAERYMRRACELEDGEACWLLST 153
Query: 248 MYMLGR--------------------YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQ 287
YM + + +D K+ F +AC+M SC+ + M+
Sbjct: 154 WYMGNKEKFKTNAAGEAKELDRAELGSLSRDMDKSLQFAIRACEMDIPQSCANVSRMFKL 213
Query: 288 GDAVPKDLRKA 298
GD VPKDL +A
Sbjct: 214 GDGVPKDLDQA 224
Score = 70.9 bits (172), Expect = 2e-11
Identities = 58/221 (26%), Positives = 101/221 (45%), Gaps = 26/221 (11%)
Query: 73 QGTRIDYKKALEY-YKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKAC-VLKH 130
Q R +Y K + Y+ C + R L G Y E L QN+Q A+ + K C +
Sbjct: 13 QAERAEYVKNIGIEYRFGCYEEKRPESCQLLGEYMEAL--QQNFQAAVAIFKKNCDENSY 70
Query: 131 PESCYNLGI-IYDRKIKGNAD--QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNH 187
P+SC+ G+ + K+ +A + + + +C+ ++ +GC L + + G + K +
Sbjct: 71 PKSCFKYGMYMLAGKVGDDASLSKMIRPMKIACDANIPQGCRYLSLVHWNGEKDRKADSE 130
Query: 188 KAVIYYLKACRLDDGQACRALGSL-------FENGDAG------------LDEDFEVAFD 228
KA Y +AC L+DG+AC L + F+ AG L D + +
Sbjct: 131 KAERYMRRACELEDGEACWLLSTWYMGNKEKFKTNAAGEAKELDRAELGSLSRDMDKSLQ 190
Query: 229 YLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQA 269
+ +AC ++ CA++ M+ LG V KD +A + +A
Sbjct: 191 FAIRACEMDIPQSCANVSRMFKLGDGVPKDLDQAKKYADRA 231
Score = 48.1 bits (113), Expect = 1e-04
Identities = 35/137 (25%), Positives = 65/137 (46%), Gaps = 15/137 (10%)
Query: 33 VAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTR-IDYKKALEYYKTACQ 91
+A K + SK K AC+ + +GC L +++ NG+ R D +KA Y + AC+
Sbjct: 82 LAGKVGDDASLSKMIRPMKIACDANIPQGCRYLSLVHWNGEKDRKADSEKAERYMRRACE 141
Query: 92 ADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQ 151
+D E C+ L Y +G + ++ +A +A L E LG + + D+
Sbjct: 142 LEDGEACWLLSTWY---MGNKEKFK--TNAAGEAKELDRAE----LG-----SLSRDMDK 187
Query: 152 AVTYYQKSCNFDMAKGC 168
++ + ++C D+ + C
Sbjct: 188 SLQFAIRACEMDIPQSC 204
Score = 47.0 bits (110), Expect = 3e-04
Identities = 39/177 (22%), Positives = 68/177 (38%), Gaps = 31/177 (17%)
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQ-- 260
++C+ LG E L ++F+ A +K C N+ MYML V D
Sbjct: 38 ESCQLLGEYME----ALQQNFQAAVAIFKKNCDENSYPKSCFKYGMYMLAGKVGDDASLS 93
Query: 261 KAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPK-DLRKALDNYERGCDMGDEVGCFALAG 319
K K ACD C + ++ G+ K D KA R C++ D C+ L+
Sbjct: 94 KMIRPMKIACDANIPQGCRYLSLVHWNGEKDRKADSEKAERYMRRACELEDGEACWLLST 153
Query: 320 MYYNMKDK------------------------ENAIMIYDKGCKLGMKQACENLTKL 352
Y K+K + ++ + C++ + Q+C N++++
Sbjct: 154 WYMGNKEKFKTNAAGEAKELDRAELGSLSRDMDKSLQFAIRACEMDIPQSCANVSRM 210
>gb|AAL47063.1|AF326616_1 (AF326616) JHP1024-like protein [Helicobacter pylori]
Length = 122
Score = 73.6 bits (179), Expect = 3e-12
Identities = 37/75 (49%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 188 KAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGS 247
KA Y+ KAC L DG C LG L+ G+ G+++DF+ AF +KAC LNNSGGC +LG
Sbjct: 48 KAKKYFEKACELKDGGGCFNLGRLYYYGE-GVEKDFKKAFALFEKACDLNNSGGCGTLGM 106
Query: 248 MYMLGRYVKKDPQKA 262
+Y G+ V+K+ KA
Sbjct: 107 LYEFGQGVEKNLTKA 121
Score = 72.8 bits (177), Expect = 6e-12
Identities = 33/78 (42%), Positives = 49/78 (62%)
Query: 221 EDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSR 280
+D+ A Y +KAC L + GGC +LG +Y G V+KD +KAF F++ACD+ ++ C
Sbjct: 44 KDYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLNNSGGCGT 103
Query: 281 MGFMYSQGDAVPKDLRKA 298
+G +Y G V K+L KA
Sbjct: 104 LGMLYEFGQGVEKNLTKA 121
Score = 67.4 bits (163), Expect = 2e-10
Identities = 33/81 (40%), Positives = 46/81 (56%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREG 97
YK+ +Y KA YF+KAC GC LG +Y G+G D+KKA ++ AC ++ G
Sbjct: 41 YKAKDYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLNNSGG 100
Query: 98 CFGLGGLYDEGLGTTQNYQEA 118
C LG LY+ G G +N +A
Sbjct: 101 CGTLGMLYEFGQGVEKNLTKA 121
Score = 58.9 bits (141), Expect = 8e-08
Identities = 26/65 (40%), Positives = 40/65 (61%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNL 137
DY KA +Y++ AC+ D GCF LG LY G G +++++A + KAC L + C L
Sbjct: 45 DYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLNNSGGCGTL 104
Query: 138 GIIYD 142
G++Y+
Sbjct: 105 GMLYE 109
Score = 55.1 bits (131), Expect = 1e-06
Identities = 24/68 (35%), Positives = 38/68 (55%)
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVG 313
Y KD KA +F++AC++ C +G +Y G+ V KD +KA +E+ CD+ + G
Sbjct: 41 YKAKDYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKACDLNNSGG 100
Query: 314 CFALAGMY 321
C L +Y
Sbjct: 101 CGTLGMLY 108
Score = 45.4 bits (106), Expect = 0.001
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 4/79 (5%)
Query: 104 LYDEGLGT--TQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKS 159
L+D G+ ++Y +A + KAC LK C+NLG +Y ++ + +A ++K+
Sbjct: 33 LFDLGVENYKAKDYIKAKKYFEKACELKDGGGCFNLGRLYYYGEGVEKDFKKAFALFEKA 92
Query: 160 CNFDMAKGCYVLGVAYEKG 178
C+ + + GC LG+ YE G
Sbjct: 93 CDLNNSGGCGTLGMLYEFG 111
Score = 42.4 bits (98), Expect = 0.008
Identities = 28/86 (32%), Positives = 45/86 (51%), Gaps = 3/86 (3%)
Query: 130 HPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKA 189
+P+ ++LG+ + K K +A Y++K+C GC+ LG Y G V++ KA
Sbjct: 29 NPKELFDLGV-ENYKAKDYI-KAKKYFEKACELKDGGGCFNLGRLYYYGE-GVEKDFKKA 85
Query: 190 VIYYLKACRLDDGQACRALGSLFENG 215
+ KAC L++ C LG L+E G
Sbjct: 86 FALFEKACDLNNSGGCGTLGMLYEFG 111
>ref|NP_286370.1| (NC_002655) ybeQ gene product [Escherichia coli O157:H7 EDL933]
ref|NP_308709.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
gb|AAG54978.1|AE005243_7 (AE005243) ybeQ gene product [Escherichia coli O157:H7 EDL933]
dbj|BAB34105.1| (AP002552) hypothetical protein [Escherichia coli O157:H7]
Length = 195
Score = 73.2 bits (178), Expect = 4e-12
Identities = 55/204 (26%), Positives = 89/204 (42%), Gaps = 36/204 (17%)
Query: 101 LGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSC 160
LG +Y G G Q+Y A Y +A + H ++ NL +Y+
Sbjct: 8 LGWMYRNGNGAAQDYTLAFFWYKQAALQGHSDAQNNLADLYED----------------- 50
Query: 161 NFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLD 220
KG V Q+ A +YLK+ + + A + + G+ G+D
Sbjct: 51 ----GKG--------------VAQNETLAAFWYLKSAQQGNRHAQFQIAWDYNAGE-GVD 91
Query: 221 EDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSR 280
+D++ A + KA + G ++G MY G+ V+KD Q AF +F +A + A +
Sbjct: 92 QDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECNDATAWYN 151
Query: 281 MGFMYSQGDAVPKDLRKALDNYER 304
+ MY G+ P DLR+ALD Y +
Sbjct: 152 LAIMYHYGEGRPVDLRQALDLYRK 175
Score = 58.9 bits (141), Expect = 8e-08
Identities = 50/210 (23%), Positives = 88/210 (41%), Gaps = 36/210 (17%)
Query: 65 LGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAK 124
LG +Y NG G DY A +YK A + L LY++G G QN A Y K
Sbjct: 8 LGWMYRNGNGAAQDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLK 67
Query: 125 ACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQ 184
+ +GN +Q + +++ +G V Q
Sbjct: 68 SAQ------------------QGNRH---AQFQIAWDYNAGEG--------------VDQ 92
Query: 185 SNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCAS 244
+A+ +YLKA A +G ++++G G+++D++ AF++ KA N++ +
Sbjct: 93 DYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQ-GVEKDYQAAFEWFTKAAECNDATAWYN 151
Query: 245 LGSMYMLGRYVKKDPQKAFNFFKQACDMGS 274
L MY G D ++A + +++ G+
Sbjct: 152 LAIMYHYGEGRPVDLRQALDLYRKVQSSGT 181
Score = 56.2 bits (134), Expect = 6e-07
Identities = 38/148 (25%), Positives = 70/148 (46%), Gaps = 7/148 (4%)
Query: 38 YKSGN-----YSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQA 92
Y++GN Y+ A ++K+A G S+ L +YE+G+G + A +Y + Q
Sbjct: 12 YRNGNGAAQDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKSAQQ 71
Query: 93 DDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNAD 150
+R F + Y+ G G Q+Y++A+ Y KA + N+G +Y + ++ +
Sbjct: 72 GNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQ 131
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKG 178
A ++ K+ + A Y L + Y G
Sbjct: 132 AAFEWFTKAAECNDATAWYNLAIMYHYG 159
Score = 55.5 bits (132), Expect = 9e-07
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 3/131 (2%)
Query: 14 FFWSLNAHLWGKQD--NSFLGVAEKAYK-SGNYSKATSYFKKACNDGVSEGCTQLGIIYE 70
FFW A L G D N+ + E + N + A ++ K+ G Q+ Y
Sbjct: 26 FFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYLKSAQQGNRHAQFQIAWDYN 85
Query: 71 NGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKH 130
G+G DYK+A+ +Y A +G +Y G G ++YQ A + + KA
Sbjct: 86 AGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAECND 145
Query: 131 PESCYNLGIIY 141
+ YNL I+Y
Sbjct: 146 ATAWYNLAIMY 156
Score = 52.4 bits (124), Expect = 8e-06
Identities = 31/115 (26%), Positives = 54/115 (46%), Gaps = 7/115 (6%)
Query: 15 FWSLNAHLWGKQDNSFLGVAEKAYKSG-----NYSKATSYFKKACNDGVSEGCTQLGIIY 69
FW L + G + F + Y +G +Y +A ++ KA G +G +Y
Sbjct: 63 FWYLKSAQQGNRHAQFQIAWD--YNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMY 120
Query: 70 ENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAK 124
++GQG DY+ A E++ A + +D + L +Y G G + ++A+D Y K
Sbjct: 121 KHGQGVEKDYQAAFEWFTKAAECNDATAWYNLAIMYHYGEGRPVDLRQALDLYRK 175
Score = 52.4 bits (124), Expect = 8e-06
Identities = 40/165 (24%), Positives = 70/165 (42%), Gaps = 12/165 (7%)
Query: 189 AVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSM 248
A +Y +A A L L+E+G + AF YL K+ N +
Sbjct: 25 AFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYL-KSAQQGNRHAQFQIAWD 83
Query: 249 YMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDM 308
Y G V +D ++A ++ +A GS + +G+MY G V KD + A + + + +
Sbjct: 84 YNAGEGVDQDYKQAMYWYLKAAAQGSVGAYVNIGYMYKHGQGVEKDYQAAFEWFTKAAEC 143
Query: 309 GDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACENLTKLR 353
D + LA MY+ Y +G + ++QA + K++
Sbjct: 144 NDATAWYNLAIMYH-----------YGEGRPVDLRQALDLYRKVQ 177
Score = 42.4 bits (98), Expect = 0.008
Identities = 35/153 (22%), Positives = 71/153 (45%), Gaps = 7/153 (4%)
Query: 208 LGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFK 267
LG ++ NG+ G +D+ +AF + ++A +S +L +Y G+ V ++ A ++
Sbjct: 8 LGWMYRNGN-GAAQDYTLAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNETLAAFWYL 66
Query: 268 QACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN---- 323
++ G+ + ++ + Y+ G+ V +D ++A+ Y + G VG + G Y
Sbjct: 67 KSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYWYLKAAAQG-SVGAYVNIGYMYKHGQG 125
Query: 324 -MKDKENAIMIYDKGCKLGMKQACENLTKLRGY 355
KD + A + K + A NL + Y
Sbjct: 126 VEKDYQAAFEWFTKAAECNDATAWYNLAIMYHY 158
>ref|NP_592847.1| (NC_003424) similar to yeast protoplast regeneration and killer
toxin resistance protein [Schizosaccharomyces pombe]
sp|Q09897|YAIA_SCHPO Hypothetical protein C24B11.10c in chromosome I
pir||S62555 protoplast regeneration, killer toxin resistance protein homolog -
fission yeast (Schizosaccharomyces pombe)
pir||T38337 protoplast regeneration, killer toxin resistance protein homolog -
fission yeast (Schizosaccharomyces pombe)
emb|CAA91775.1| (Z67757) similar to yeast protoplast regeneration and killer toxin
resistance protein [Schizosaccharomyces pombe]
Length = 932
Score = 72.8 bits (177), Expect = 6e-12
Identities = 61/238 (25%), Positives = 98/238 (40%), Gaps = 9/238 (3%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
KA + A G ++ + + G G + D K + YK A + D E F + +
Sbjct: 661 KAFELYSLAAKKGHPLSNYRVAVCLQTGTGVKPDTSKCVAIYKKAAEMDVVEAMFRIALI 720
Query: 105 YDEGL-GTTQNYQEAIDAYAKACVLKHPESC---YNLGIIYDRK----IKGNADQAVTYY 156
Y GL G +N + +AC K PES Y L IY++ + ++ Y
Sbjct: 721 YLNGLLGQKRNISLGVQWLERACKSKGPESVRAMYELAKIYEQPDRYGVSATPERKFELY 780
Query: 157 QKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGD 216
++S + A LG YE G L +++ +Y +A D G+A L + G
Sbjct: 781 KQSAVYGYAAAQCKLGECYEHGLLGCLAEPRRSIFWYTRAAEQDYGEAELGLSGWYLTGS 840
Query: 217 AG-LDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMG 273
G L ++ E A + KA + ++G M G V DP A N++ +A G
Sbjct: 841 EGILPKNGEEALLWAHKAACKGLAKAQYAVGFMMEQGIGVAADPSSAHNWYIRAAKQG 898
>ref|NP_246550.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK03695.1| (AE006198) unknown [Pasteurella multocida]
Length = 172
Score = 72.4 bits (176), Expect = 7e-12
Identities = 36/135 (26%), Positives = 74/135 (54%), Gaps = 2/135 (1%)
Query: 36 KAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDR 95
+AYK G+++ A + G +G +Y++G G D ++AL++Y+ + + +
Sbjct: 35 EAYKRGDHATAFKLWLSRAEQGEMSAQFNVGRMYDDGDGVEQDKQQALKWYQKSAEQNHP 94
Query: 96 EGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNADQAV 153
+ + LG +Y EG G Q++++A Y+++ V + YNLG +Y I+ + D+A
Sbjct: 95 DAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGIERDWDRAK 154
Query: 154 TYYQKSCNFDMAKGC 168
Y++++C + +GC
Sbjct: 155 MYFKQACKAGLPEGC 169
Score = 61.6 bits (148), Expect = 1e-08
Identities = 36/142 (25%), Positives = 74/142 (51%), Gaps = 4/142 (2%)
Query: 175 YEKGFLEVKQSNHKAVIYYLKACRLDDGQACRA--LGSLFENGDAGLDEDFEVAFDYLQK 232
+E+G K+ +H A + L R + G+ +G ++++GD G+++D + A + QK
Sbjct: 30 FEQGVEAYKRGDH-ATAFKLWLSRAEQGEMSAQFNVGRMYDDGD-GVEQDKQQALKWYQK 87
Query: 233 ACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVP 292
+ N+ LG MY G + +D ++A+ ++ Q+ G A + +G +Y+ G+ +
Sbjct: 88 SAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYSQSAVQGDARALYNLGTLYANGEGIE 147
Query: 293 KDLRKALDNYERGCDMGDEVGC 314
+D +A +++ C G GC
Sbjct: 148 RDWDRAKMYFKQACKAGLPEGC 169
Score = 58.9 bits (141), Expect = 8e-08
Identities = 29/108 (26%), Positives = 57/108 (51%), Gaps = 4/108 (3%)
Query: 244 SLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYE 303
++G MY G V++D Q+A +++++ + + +G MYS+GD + +D ++A Y
Sbjct: 63 NVGRMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGDGIAQDFKQAYKWYS 122
Query: 304 RGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACE 347
+ GD + L +Y N +D + A M + + CK G+ + C+
Sbjct: 123 QSAVQGDARALYNLGTLYANGEGIERDWDRAKMYFKQACKAGLPEGCD 170
Score = 50.8 bits (120), Expect = 2e-05
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 4/110 (3%)
Query: 135 YNLGIIYDRK--IKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIY 192
+N+G +YD ++ + QA+ +YQKS + Y LG+ Y +G + Q +A +
Sbjct: 62 FNVGRMYDDGDGVEQDKQQALKWYQKSAEQNHPDAQYHLGLMYSEGD-GIAQDFKQAYKW 120
Query: 193 YLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
Y ++ D +A LG+L+ NG+ G++ D++ A Y ++AC GC
Sbjct: 121 YSQSAVQGDARALYNLGTLYANGE-GIERDWDRAKMYFKQACKAGLPEGC 169
>dbj|BAB25716.1| (AK008518) data source:SPTR, source key:Q9H9Z9,
evidence:ISS~homolog to CDNA FLJ12439 FIS, CLONE
NT2RM1000127~putative [Mus musculus]
Length = 204
Score = 70.1 bits (170), Expect = 4e-11
Identities = 53/175 (30%), Positives = 76/175 (43%), Gaps = 8/175 (4%)
Query: 131 PESCYNLGIIYDRKIKGNADQAVTYYQKSCN-FDMAKGCYVLGVAYEKGFLEVKQSNHKA 189
P CY L + Y I+ N D+A + +C + CY LG Y G + Q A
Sbjct: 7 PGGCYRL-VDYLEGIQKNFDEAAKVLKFNCEKYGHGDSCYKLGAYYVTGKGGLTQDLKAA 65
Query: 190 VIYYLKACRLDDG---QACRALGSLFENGDAGLD--EDFEVAFDYLQKACGLNNSGGCAS 244
+L AC ++C +G L +G D D A DY +AC + C +
Sbjct: 66 SSCFLMACEKPGKKSVESCHNVGLLAHDGQVNEDGQPDLGKARDYYSRACDGGYAASCFN 125
Query: 245 LGSMYMLGRY-VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKA 298
L +M++ G KD A + +ACD+G +C+ MY GD V KD KA
Sbjct: 126 LSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWACANASRMYKLGDGVDKDEAKA 180
Score = 63.5 bits (153), Expect = 3e-09
Identities = 57/180 (31%), Positives = 76/180 (41%), Gaps = 15/180 (8%)
Query: 95 REGCFGLGGLYDEGLGTTQNYQEAIDAYAKACV-LKHPESCYNLGIIYDRKIKGNADQ-- 151
REG G L D G +N+ EA C H +SCY LG Y KG Q
Sbjct: 4 REGPGGCYRLVDYLEGIQKNFDEAAKVLKFNCEKYGHGDSCYKLGAYYVTG-KGGLTQDL 62
Query: 152 --AVTYYQKSCNFDMAKG---CYVLGVAYEKGFLEVKQSNH----KAVIYYLKACRLDDG 202
A + + +C K C+ +G+ G +V + KA YY +AC
Sbjct: 63 KAASSCFLMACEKPGKKSVESCHNVGLLAHDG--QVNEDGQPDLGKARDYYSRACDGGYA 120
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKA 262
+C L ++F G G +D +A Y KAC L + CA+ MY LG V KD KA
Sbjct: 121 ASCFNLSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWACANASRMYKLGDGVDKDEAKA 180
Score = 63.2 bits (152), Expect = 5e-09
Identities = 49/163 (30%), Positives = 74/163 (45%), Gaps = 12/163 (7%)
Query: 167 GCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVA 226
GCY L V Y +G K + A + + G +C LG+ + G GL +D + A
Sbjct: 9 GCYRL-VDYLEGIQ--KNFDEAAKVLKFNCEKYGHGDSCYKLGAYYVTGKGGLTQDLKAA 65
Query: 227 FDYLQKAC---GLNNSGGCASLGSMYMLGRYVKKDPQ----KAFNFFKQACDMGSAVSCS 279
AC G + C ++G + G+ V +D Q KA +++ +ACD G A SC
Sbjct: 66 SSCFLMACEKPGKKSVESCHNVGLLAHDGQ-VNEDGQPDLGKARDYYSRACDGGYAASCF 124
Query: 280 RMGFMYSQG-DAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
+ M+ QG PKD+ A + CD+G C + MY
Sbjct: 125 NLSAMFLQGAPGFPKDMGLACKYSMKACDLGHVWACANASRMY 167
Score = 57.8 bits (138), Expect = 2e-07
Identities = 47/149 (31%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 218 GLDEDFEVAFDYLQKACGLNNSG-GCASLGSMYMLGRY-VKKDPQKAFNFFKQACDMG-- 273
G+ ++F+ A L+ C G C LG+ Y+ G+ + +D + A + F AC+
Sbjct: 19 GIQKNFDEAAKVLKFNCEKYGHGDSCYKLGAYYVTGKGGLTQDLKAASSCFLMACEKPGK 78
Query: 274 -SAVSCSRMGFMYSQG----DAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----- 323
S SC +G + G D P DL KA D Y R CD G CF L+ M+
Sbjct: 79 KSVESCHNVGLLAHDGQVNEDGQP-DLGKARDYYSRACDGGYAASCFNLSAMFLQGAPGF 137
Query: 324 MKDKENAIMIYDKGCKLGMKQACENLTKL 352
KD A K C LG AC N +++
Sbjct: 138 PKDMGLACKYSMKACDLGHVWACANASRM 166
Score = 43.5 bits (101), Expect = 0.004
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 11/134 (8%)
Query: 19 NAHLWGKQDNSF-LGVAEKAYKSG---NYSKATSYFKKACNDGVS---EGCTQLGIIYEN 71
N +G D+ + LG K G + A+S F AC E C +G++ +
Sbjct: 34 NCEKYGHGDSCYKLGAYYVTGKGGLTQDLKAASSCFLMACEKPGKKSVESCHNVGLLAHD 93
Query: 72 GQGT---RIDYKKALEYYKTACQADDREGCFGLGGLYDEGL-GTTQNYQEAIDAYAKACV 127
GQ + D KA +YY AC CF L ++ +G G ++ A KAC
Sbjct: 94 GQVNEDGQPDLGKARDYYSRACDGGYAASCFNLSAMFLQGAPGFPKDMGLACKYSMKACD 153
Query: 128 LKHPESCYNLGIIY 141
L H +C N +Y
Sbjct: 154 LGHVWACANASRMY 167
>ref|NP_177498.1| (NM_106015) hypothetical protein [Arabidopsis thaliana]
gb|AAG51809.1|AC079676_4 (AC079676) hypothetical protein; 26401-23451 [Arabidopsis thaliana]
Length = 604
Score = 69.7 bits (169), Expect = 5e-11
Identities = 63/263 (23%), Positives = 108/263 (40%), Gaps = 28/263 (10%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
NY+KA YF+ A N+ G LG++Y G G + D + A +Y+ A A + + L
Sbjct: 293 NYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQL 352
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCN 161
++ G+G T+N + A Y K + P S + + + +KG+ +A Y +
Sbjct: 353 AKMFHTGVGLTKNLEMATTFY-KLVAERGPWSSLSRWAL-EAYLKGDVGKAFILYSRMS- 409
Query: 162 FDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDE 221
E G+ EV QSN ++ G+ +G G E
Sbjct: 410 --------------ELGY-EVAQSNAAWIVDKY-------GERSMCMGVY---GFCTDKE 444
Query: 222 DFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRM 281
+ A +A N +G Y GR ++D +A + A +A + +
Sbjct: 445 RHDRAHSLWWRASEQGNEHAALLIGDAYYYGRGTERDFVRAAEAYMYAKSQSNAQAMFNL 504
Query: 282 GFMYSQGDAVPKDLRKALDNYER 304
G+M+ G+ +P DL A Y++
Sbjct: 505 GYMHEHGEGLPFDLHLAKRYYDQ 527
Score = 56.6 bits (135), Expect = 4e-07
Identities = 47/206 (22%), Positives = 86/206 (40%), Gaps = 7/206 (3%)
Query: 143 RKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDG 202
RK +G D+ + + + +G+ Y G +++ + KA+ ++ KA
Sbjct: 221 RKSRGEEDEDFQILEYQAEKGNSVAMHKIGLFYYFGLRGLRRDHAKALYWFSKA------ 274
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKA 262
LG L+ G ++ A +Y + A + G +LG +Y+ G VKKD + A
Sbjct: 275 -EFNGLGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHA 333
Query: 263 FNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYY 322
+F A + G + ++ M+ G + K+L A Y+ + G A Y
Sbjct: 334 TKYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYKLVAERGPWSSLSRWALEAY 393
Query: 323 NMKDKENAIMIYDKGCKLGMKQACEN 348
D A ++Y + +LG + A N
Sbjct: 394 LKGDVGKAFILYSRMSELGYEVAQSN 419
>gb|EAA00460.1| (AAAB01008986) agCP9334 [Anopheles gambiae str. PEST]
Length = 228
Score = 68.2 bits (165), Expect = 1e-10
Identities = 56/189 (29%), Positives = 82/189 (42%), Gaps = 31/189 (16%)
Query: 129 KHPESCYNLGIIYDRKIKGNADQAVTYYQKSCN-FDMAKGCYVLG--VAYEKGFLEVKQS 185
K PE C+ LG Y I+ + ++A Y+ +C+ ++ K C G KG K
Sbjct: 51 KKPEVCHLLGD-YLEGIRKDFEKAAKVYRSNCDDYNYGKSCLKYGNYTFLGKGRTSEKGD 109
Query: 186 NHKAVIYYLKACRLDDGQACRALGSLFENG--DAGLDEDFEVAFDYLQKACGLNNSGGCA 243
KA YY K C L+D AC G L + + D F+ L+K+C +NN+G C
Sbjct: 110 PAKAYAYYEKGCALNDPDACLHSGLLLVSKLMPKEITRDVPKGFELLKKSCEMNNAGACF 169
Query: 244 SLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYE 303
L MY+ G V K+ Q MY++GD +D +KA +
Sbjct: 170 YLSGMYISG--VLKEDQ-----------------------MYAKGDGTARDEKKAEKYKK 204
Query: 304 RGCDMGDEV 312
+M DEV
Sbjct: 205 LALEMQDEV 213
Score = 59.7 bits (143), Expect = 5e-08
Identities = 46/169 (27%), Positives = 75/169 (44%), Gaps = 14/169 (8%)
Query: 177 KGFLEVKQSNHKAVIYYLKACRLDDG-QACRALGSLFENGDAGLDEDFEVAFDYLQKACG 235
K EVK+ K + Y C + + C LG E G+ +DFE A + C
Sbjct: 27 KNETEVKEYIDKLGVEYRFGCYSEKKPEVCHLLGDYLE----GIRKDFEKAAKVYRSNCD 82
Query: 236 LNNSG-GCASLGSMYMLGR---YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQG--- 288
N G C G+ LG+ K DP KA+ ++++ C + +C G +
Sbjct: 83 DYNYGKSCLKYGNYTFLGKGRTSEKGDPAKAYAYYEKGCALNDPDACLHSGLLLVSKLMP 142
Query: 289 DAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDKG 337
+ +D+ K + ++ C+M + CF L+GMY + KE+ +Y KG
Sbjct: 143 KEITRDVPKGFELLKKSCEMNNAGACFYLSGMYISGVLKED--QMYAKG 189
Score = 49.3 bits (116), Expect = 7e-05
Identities = 39/136 (28%), Positives = 59/136 (42%), Gaps = 16/136 (11%)
Query: 60 EGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDR---EGCFGLGGLYDEGLGTTQNYQ 116
E C LG E G R D++KA + Y++ C DD + C G G G T
Sbjct: 54 EVCHLLGDYLE---GIRKDFEKAAKVYRSNC--DDYNYGKSCLKYGNYTFLGKGRTSEKG 108
Query: 117 EAIDAYA---KACVLKHPESCYNLGI-----IYDRKIKGNADQAVTYYQKSCNFDMAKGC 168
+ AYA K C L P++C + G+ + ++I + + +KSC + A C
Sbjct: 109 DPAKAYAYYEKGCALNDPDACLHSGLLLVSKLMPKEITRDVPKGFELLKKSCEMNNAGAC 168
Query: 169 YVLGVAYEKGFLEVKQ 184
+ L Y G L+ Q
Sbjct: 169 FYLSGMYISGVLKEDQ 184
>gb|AAH11926.1|AAH11926 (BC011926) Similar to KIAA0141 gene product [Homo sapiens]
Length = 515
Score = 66.6 bits (161), Expect = 4e-10
Identities = 55/191 (28%), Positives = 91/191 (46%), Gaps = 5/191 (2%)
Query: 29 SFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKT 88
+FLG KSG+++ A SYF+KA G S+ G+ +E+G+GT D KA+ YY+
Sbjct: 249 NFLGTENM--KSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQL 306
Query: 89 ACQADDREGCFGLGG--LYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIK 146
A + L D Q A+ +A E+ LG+++ ++
Sbjct: 307 AASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPY 366
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
+ +AV Y + N ++ Y LG+ YEKG L V+++ +A+ Y ++ L + A
Sbjct: 367 LDEQRAVKYLWLAANNGDSQSRYHLGICYEKG-LGVQRNLGEALRCYQQSAALGNEAAQE 425
Query: 207 ALGSLFENGDA 217
L +LF G A
Sbjct: 426 RLRALFSMGAA 436
>ref|NP_055588.1| (NM_014773) KIAA0141 gene product [Homo sapiens]
sp|Q14154|Y141_HUMAN Hypothetical protein KIAA0141
dbj|BAA09490.1| (D50931) The KIAA0141 gene product is novel. [Homo sapiens]
Length = 515
Score = 66.6 bits (161), Expect = 4e-10
Identities = 55/191 (28%), Positives = 91/191 (46%), Gaps = 5/191 (2%)
Query: 29 SFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKT 88
+FLG KSG+++ A SYF+KA G S+ G+ +E+G+GT D KA+ YY+
Sbjct: 249 NFLGTENM--KSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQL 306
Query: 89 ACQADDREGCFGLGG--LYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIK 146
A + L D Q A+ +A E+ LG+++ ++
Sbjct: 307 AASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPY 366
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
+ +AV Y + N ++ Y LG+ YEKG L V+++ +A+ Y ++ L + A
Sbjct: 367 LDEQRAVKYLWLAANNGDSQSRYHLGICYEKG-LGVQRNLGEALRCYQQSAALGNEAAQE 425
Query: 207 ALGSLFENGDA 217
L +LF G A
Sbjct: 426 RLRALFSMGAA 436
>gb|AAH07855.1|AAH07855 (BC007855) KIAA0141 gene product [Homo sapiens]
gb|AAH10452.1|AAH10452 (BC010452) KIAA0141 gene product [Homo sapiens]
gb|AAH11269.1|AAH11269 (BC011269) KIAA0141 gene product [Homo sapiens]
Length = 515
Score = 66.6 bits (161), Expect = 4e-10
Identities = 55/191 (28%), Positives = 91/191 (46%), Gaps = 5/191 (2%)
Query: 29 SFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKT 88
+FLG KSG+++ A SYF+KA G S+ G+ +E+G+GT D KA+ YY+
Sbjct: 249 NFLGTENM--KSGDHTAAFSYFQKAAARGYSKAQYNAGLCHEHGRGTPRDISKAVLYYQL 306
Query: 89 ACQADDREGCFGLGG--LYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIK 146
A + L D Q A+ +A E+ LG+++ ++
Sbjct: 307 AASQGHSLAQYRYARCLLRDPASSWNPERQRAVSLLKQAADSGLREAQAFLGVLFTKEPY 366
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
+ +AV Y + N ++ Y LG+ YEKG L V+++ +A+ Y ++ L + A
Sbjct: 367 LDEQRAVKYLWLAANNGDSQSRYHLGICYEKG-LGVQRNLGEALRCYQQSAALGNEAAQE 425
Query: 207 ALGSLFENGDA 217
L +LF G A
Sbjct: 426 RLRALFSMGAA 436
>ref|NP_459434.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL19393.1| (AE008716) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 427
Score = 66.2 bits (160), Expect = 5e-10
Identities = 68/273 (24%), Positives = 107/273 (38%), Gaps = 47/273 (17%)
Query: 77 IDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYN 136
+D +A++YY+ AC D GCF Y+ G+GT ++ +A AK K S N
Sbjct: 1 MDIPQAIKYYEQACDLDGDYGCFNAAYFYEYGIGTQKDITQA-KTLAKQLREKINLSNIN 59
Query: 137 L---------GIIYDRKIKGNAD--------QAVTYYQKSCNFDMAKGCYVLG------- 172
L G +Y K++ D Q +++Y + D K +G
Sbjct: 60 LDKKVSERIIGSVYSNKLEAYRDLSFRPHFIQGLSFYFYAPQSDERKLLSRIGFDSSHLA 119
Query: 173 -------------VAYEKGFL--------EVKQSNHKAVIYYLK-ACRLDDGQACRALGS 210
VAY+ L E K + + +L+ + D + LG
Sbjct: 120 RIAILWAREGDPEVAYQTAKLVSTLYFNNETKTIDIAEALKWLRISAEKGDADSQTLLGF 179
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
L+E+ GL D E A + + A N +LG MY G V D KA FFK+A
Sbjct: 180 LYEHAGLGLQPDGEKARKWYEMAAQQGNGEALYTLGRMYYSGVLVNVDYDKALYFFKKAY 239
Query: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYE 303
+ + + MY G +V D +++ Y+
Sbjct: 240 EKKLQEAADYLAQMYFNGQSVDVDCQQSWHYYD 272
>ref|NP_273467.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||F81200 conserved hypothetical protein NMB0419 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF40857.1| (AE002398) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 198
Score = 65.1 bits (157), Expect = 1e-09
Identities = 45/146 (30%), Positives = 75/146 (50%), Gaps = 2/146 (1%)
Query: 169 YVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFD 228
Y LG Y KG V++ + +AV +Y +A QA LG ++ NG G+ +D A
Sbjct: 45 YNLGAMYYKG-RGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANG-RGVRQDDTEAVR 102
Query: 229 YLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQG 288
+ ++A +LG +Y GR V++D +A +F+QA G A + + +G MY++
Sbjct: 103 WYRQAAAQGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQNNLGVMYAER 162
Query: 289 DAVPKDLRKALDNYERGCDMGDEVGC 314
V +D A + + + C GD+ GC
Sbjct: 163 RGVRQDRALAQEWFGKACQNGDQDGC 188
Score = 64.7 bits (156), Expect = 2e-09
Identities = 44/156 (28%), Positives = 78/156 (49%), Gaps = 3/156 (1%)
Query: 52 KACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGT 111
+A G + LG +Y G+G R D +A+ +Y+ A + + + LG +Y G G
Sbjct: 34 QAAAQGNAAAQYNLGAMYYKGRGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANGRGV 93
Query: 112 TQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCNFDMAKGCY 169
Q+ EA+ Y +A ++ YNLG+IY R ++ + +AV +++++ +A+
Sbjct: 94 RQDDTEAVRWYRQAAAQGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQN 153
Query: 170 VLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQAC 205
LGV Y + V+Q A ++ KAC+ D C
Sbjct: 154 NLGVMYAER-RGVRQDRALAQEWFGKACQNGDQDGC 188
Score = 60.8 bits (146), Expect = 2e-08
Identities = 34/127 (26%), Positives = 66/127 (51%), Gaps = 2/127 (1%)
Query: 44 SKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGG 103
++A ++++A G+++ LG +Y NG+G R D +A+ +Y+ A + + LG
Sbjct: 62 AEAVRWYRQAAEQGLAQAQYNLGWMYANGRGVRQDDTEAVRWYRQAAAQGVVQAQYNLGV 121
Query: 104 LYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVT--YYQKSCN 161
+Y EG G Q+ EA+ + +A ++ NLG++Y + D+A+ ++ K+C
Sbjct: 122 IYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQNNLGVMYAERRGVRQDRALAQEWFGKACQ 181
Query: 162 FDMAKGC 168
GC
Sbjct: 182 NGDQDGC 188
Score = 51.2 bits (121), Expect = 2e-05
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 4/122 (3%)
Query: 232 KACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAV 291
+A N+ +LG+MY GR V++D +A +++QA + G A + +G+MY+ G V
Sbjct: 34 QAAAQGNAAAQYNLGAMYYKGRGVRRDDAEAVRWYRQAAEQGLAQAQYNLGWMYANGRGV 93
Query: 292 PKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQACE 347
+D +A+ Y + G + L +Y +D A+ + + G+ QA
Sbjct: 94 RQDDTEAVRWYRQAAAQGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQN 153
Query: 348 NL 349
NL
Sbjct: 154 NL 155
Score = 47.0 bits (110), Expect = 3e-04
Identities = 26/93 (27%), Positives = 46/93 (48%)
Query: 44 SKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGG 103
++A ++++A GV + LG+IY G+G R D +A+ +++ A + LG
Sbjct: 98 TEAVRWYRQAAAQGVVQAQYNLGVIYAEGRGVRQDDVEAVRWFRQAAAQGVAQAQNNLGV 157
Query: 104 LYDEGLGTTQNYQEAIDAYAKACVLKHPESCYN 136
+Y E G Q+ A + + KAC + C N
Sbjct: 158 MYAERRGVRQDRALAQEWFGKACQNGDQDGCDN 190
>gb|AAC37164.1| (L05770) putative regulatory protein PobS [Acinetobacter sp. ADP1]
Length = 392
Score = 63.9 bits (154), Expect = 3e-09
Identities = 37/129 (28%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 52 KACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGT 111
K +G + QL +Y NG + AL +Y+ +D EG LG LY GLG
Sbjct: 226 KQAQEGCIKAQNQLASMYLNGLDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGI 285
Query: 112 TQNYQEAIDAYAKACVLKHPESCYNLGIIYDRK--IKGNADQAVTYYQKSCNFDMAKGCY 169
+NY+ + K+ +P++ + L +Y++ ++ + QA+ +Y+K+ N A Y
Sbjct: 286 EKNYELGLTWIKKSVKQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKAANLRHATSAY 345
Query: 170 VLGVAYEKG 178
LG +E G
Sbjct: 346 RLGQIFELG 354
Score = 63.5 bits (153), Expect = 3e-09
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 180 LEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNS 239
L+V Q+ A+ +Y K +D + LG L+ NG G+++++E+ +++K+ N
Sbjct: 247 LDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNG-LGIEKNYELGLTWIKKSVKQNYP 305
Query: 240 GGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKAL 299
+L +Y G V+KD Q+A F+K+A ++ A S R+G ++ G V DL+ A
Sbjct: 306 DAYFTLAELYEKGHIVQKDIQQALIFYKKAANLRHATSAYRLGQIFELGQGVTLDLKLAK 365
Query: 300 DNYER 304
Y +
Sbjct: 366 RFYHQ 370
Score = 57.8 bits (138), Expect = 2e-07
Identities = 37/124 (29%), Positives = 61/124 (48%), Gaps = 3/124 (2%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
N S A +++K + EG LG +Y NG G +Y+ L + K + + + + F L
Sbjct: 252 NMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELGLTWIKKSVKQNYPDAYFTL 311
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVT---YYQK 158
LY++G ++ Q+A+ Y KA L+H S Y LG I++ D + Y+Q
Sbjct: 312 AELYEKGHIVQKDIQQALIFYKKAANLRHATSAYRLGQIFELGQGVTLDLKLAKRFYHQA 371
Query: 159 SCNF 162
+ NF
Sbjct: 372 ASNF 375
Score = 42.4 bits (98), Expect = 0.008
Identities = 24/119 (20%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKA 262
+A L S++ NG + ++ +A + +K N+ G +LG +Y+ G ++K+ +
Sbjct: 234 KAQNQLASMYLNG-LDVTQNMSLALFWYEKTASQNDPEGELNLGKLYLNGLGIEKNYELG 292
Query: 263 FNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
+ K++ + + +Y +G V KD+++AL Y++ ++ + L ++
Sbjct: 293 LTWIKKSVKQNYPDAYFTLAELYEKGHIVQKDIQQALIFYKKAANLRHATSAYRLGQIF 351
>ref|NP_283034.1| (NC_003116) hypothetical protein NMA0184 [Neisseria meningitidis
Z2491]
pir||F82012 hypothetical protein NMA0184 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB83499.1| (AL162752) hypothetical protein NMA0184 [Neisseria meningitidis
Z2491]
Length = 468
Score = 61.2 bits (147), Expect = 2e-08
Identities = 66/295 (22%), Positives = 111/295 (37%), Gaps = 38/295 (12%)
Query: 29 SFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKT 88
++ +A + G+ A ++KA GV+ C QLG IY G G ++ +A Y +
Sbjct: 135 AYYHLARHHQRQGDVETAIEQYEKAAALGVTAACWQLGQIYFYGTGVSPNHAQAEHYLEP 194
Query: 89 ACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLG--IIYDRKIK 146
A QA L L Q EA++ Y +A + E+ L + +
Sbjct: 195 AAQAGHIAAQTLLADLL-----AAQRKPEALEWYRRAADKEQAEAQSKLAQYALTGELSE 249
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
+ QA Y + + D + ++G Y G L +K NH A YY +A L A +
Sbjct: 250 RDPFQAARYAKAAAEKDHPEALKIMGDLYRYG-LGIKADNHIAHDYYHRAAALGSAAAAQ 308
Query: 207 ALGS-------------------------LFENGDA-----GLDEDFEVAFDYLQKACGL 236
L S ++ +A G D+ A +A G
Sbjct: 309 KLISDAALYHPQQYEQIKTAALQQQQTETIYRLAEAQACAIGRPADYNAARKNYMEAAGF 368
Query: 237 NNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAV 291
++ A+LG +Y G +DP+ A +++ A + + + Y G V
Sbjct: 369 HHKNAAAALGRIYHYGLGTAQDPRAAAHWYAIAAEQNHPSAQYHLACFYYHGQGV 423
>ref|NP_284256.1| (NC_003116) hypothetical protein [Neisseria meningitidis Z2491]
pir||H81845 hypothetical protein NMA1541 [imported] - Neisseria meningitidis
(group A strain Z2491)
emb|CAB84768.1| (AL162756) hypothetical protein [Neisseria meningitidis Z2491]
Length = 477
Score = 60.8 bits (146), Expect = 2e-08
Identities = 66/295 (22%), Positives = 119/295 (39%), Gaps = 50/295 (16%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDY---------------------- 79
++ A ++KA G++ QLG+ Y GQGT++D
Sbjct: 166 DFETAHLLYRKAAAQGLAAAHWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPL 225
Query: 80 ---------KKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKH 130
+A+ +++ A Q +D + L +Y +G +NY+ A+ A +H
Sbjct: 226 AELILPTAPDEAVHWFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERH 285
Query: 131 PESCYNLGIIYDRKIKGNAD--QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHK 188
PE LG IY + +D +A+ YY+++ AY+K + NH
Sbjct: 286 PEGLRILGDIYRYGLGMTSDKEKALHYYRQAAEAGSL-------AAYQK-LISDSALNHP 337
Query: 189 AVIYYLKACRLDDGQACRALGSLFENGDA---GLD--EDFEVAFDYLQKACGLNNSGGCA 243
+K + +A R L++ A GL ++ A +A L +S
Sbjct: 338 DQYGGIKDSAIRRQRAER----LYQKAQALHYGLQCAPEYAAALKLYTEAAELGHSKAQT 393
Query: 244 SLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKA 298
+LGSMY G+ + D +A +F++A +++ + ++ G V D KA
Sbjct: 394 NLGSMYYFGQGMTADYNEARKWFEKAAAQKDSMALYNLACIHYNGHGVEPDKEKA 448
Score = 60.1 bits (144), Expect = 4e-08
Identities = 57/229 (24%), Positives = 98/229 (41%), Gaps = 5/229 (2%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
+A +F++A + + L IY G+ +YK AL + + A EG LG +
Sbjct: 236 EAVHWFQQAAQENDPDAHAALADIYLQGKHPERNYKLALHHAEAAAAERHPEGLRILGDI 295
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDM 164
Y GLG T + ++A+ Y +A + L I D + + DQ +
Sbjct: 296 YRYGLGMTSDKEKALHYYRQAAEAGSLAAYQKL--ISDSAL-NHPDQYGGIKDSAIRRQR 352
Query: 165 AKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFE 224
A+ Y A G L+ A+ Y +A L +A LGS++ G G+ D+
Sbjct: 353 AERLYQKAQALHYG-LQCAPEYAAALKLYTEAAELGHSKAQTNLGSMYYFGQ-GMTADYN 410
Query: 225 VAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMG 273
A + +KA +S +L ++ G V+ D +KA + ++A + G
Sbjct: 411 EARKWFEKAAAQKDSMALYNLACIHYNGHGVEPDKEKACRYLQEAINNG 459
>ref|NP_585979.1| (NC_003234) similarity to HYPOTHETICAL PROTEIN YBET_ECOLI
[Encephalitozoon cuniculi]
emb|CAD25583.1| (AL590447) similarity to HYPOTHETICAL PROTEIN YBET_ECOLI
[Encephalitozoon cuniculi]
Length = 458
Score = 60.1 bits (144), Expect = 4e-08
Identities = 59/241 (24%), Positives = 98/241 (40%), Gaps = 11/241 (4%)
Query: 65 LGIIYENGQ-GTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYA 123
LG+ +E G G R +++A E+Y A Q G F + Y++G+G +N + A+ Y
Sbjct: 164 LGLSHEKGLFGVRRSHRRAFEHYIIAAQLGSPAGTFRVAQCYEKGIGKKRNMRNALHFYR 223
Query: 124 KACVLKHPESCYNLGII--YDRKIKGNADQAVTYY----QKSCNFDMAKGCYVLGVAYE- 176
A L E+ + G+I + G + +Y K Y LG YE
Sbjct: 224 CAAKLGLVEAMHTYGVIILFGEVGDGTDLEIGVFYLRLAAKKATHAYPYALYDLGRCYEG 283
Query: 177 -KGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACG 235
KG + + A YLK LD + E G+ G ++D A ++ KA
Sbjct: 284 GKGPDIISPDDSYAFKLYLKGASLDCPNCQFRVARCLEAGEMGQEKDVARAVEWYAKATD 343
Query: 236 LNNSGGCASLGSMYMLG--RYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPK 293
L S L +++ G V+++ + F +A + + + Y QG V K
Sbjct: 344 LGQSDAQLRLSVLFLNGLENVVERNYKLGFRLGLKAAARENISAAYLVSDCYEQGVGVKK 403
Query: 294 D 294
+
Sbjct: 404 N 404
Score = 46.2 bits (108), Expect = 6e-04
Identities = 53/231 (22%), Positives = 96/231 (40%), Gaps = 15/231 (6%)
Query: 132 ESCYNLGIIYDRKIKG---NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHK 188
E Y LG+ +++ + G + +A +Y + G + + YEKG + K++
Sbjct: 159 EMHYYLGLSHEKGLFGVRRSHRRAFEHYIIAAQLGSPAGTFRVAQCYEKG-IGKKRNMRN 217
Query: 189 AVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSG---GCASL 245
A+ +Y A +L +A G + G+ G D E+ YL+ A L
Sbjct: 218 ALHFYRCAAKLGLVEAMHTYGVIILFGEVGDGTDLEIGVFYLRLAAKKATHAYPYALYDL 277
Query: 246 GSMYMLGR---YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGD-AVPKDLRKALDN 301
G Y G+ + D AF + + + R+ G+ KD+ +A++
Sbjct: 278 GRCYEGGKGPDIISPDDSYAFKLYLKGASLDCPNCQFRVARCLEAGEMGQEKDVARAVEW 337
Query: 302 YERGCDMGDEVGCFALAGMYYNMKDKENAI-MIYDKGCKLGMKQAC-ENLT 350
Y + D+G L+ ++ N EN + Y G +LG+K A EN++
Sbjct: 338 YAKATDLGQSDAQLRLSVLFLN--GLENVVERNYKLGFRLGLKAAARENIS 386
Score = 45.4 bits (106), Expect = 0.001
Identities = 54/227 (23%), Positives = 93/227 (40%), Gaps = 10/227 (4%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREG--CF 99
++ +A ++ A G G ++ YE G G + + + AL +Y+ A + E +
Sbjct: 178 SHRRAFEHYIIAAQLGSPAGTFRVAQCYEKGIGKKRNMRNALHFYRCAAKLGLVEAMHTY 237
Query: 100 GLGGLYDE-GLGTTQNYQE-AIDAYAKACVLKHPESCYNLGIIYDRK-----IKGNADQA 152
G+ L+ E G GT + AK +P + Y+LG Y+ I + A
Sbjct: 238 GVIILFGEVGDGTDLEIGVFYLRLAAKKATHAYPYALYDLGRCYEGGKGPDIISPDDSYA 297
Query: 153 VTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLF 212
Y K + D + + E G + ++ +AV +Y KA L A L LF
Sbjct: 298 FKLYLKGASLDCPNCQFRVARCLEAGEMGQEKDVARAVEWYAKATDLGQSDAQLRLSVLF 357
Query: 213 ENG-DAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKD 258
NG + ++ ++++ F KA N + Y G VKK+
Sbjct: 358 LNGLENVVERNYKLGFRLGLKAAARENISAAYLVSDCYEQGVGVKKN 404
>dbj|BAB22100.1| (AK002437) data source:SPTR, source key:Q14154,
evidence:ISS~homolog to HYPOTHETICAL PROTEIN
KIAA0141~putative [Mus musculus]
Length = 510
Score = 60.1 bits (144), Expect = 4e-08
Identities = 51/192 (26%), Positives = 91/192 (46%), Gaps = 5/192 (2%)
Query: 29 SFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKT 88
+FLG K+G+Y+ A SYF+KA + G S+ +G+ E+G+GT D KA+ +Y
Sbjct: 250 NFLGTEN--IKTGDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAILFYHL 307
Query: 89 ACQADDREGCFGLGG--LYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIK 146
A + L G + + A+ +A E+ LG+++ ++
Sbjct: 308 AAVQGHSLAQYRYARCLLQSPGSLSDPERERAVSLLKQAADSGLTEAQAFLGVLFTKEPH 367
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
+ +AV Y + + ++ + LG+ YEKG L +++ +AV Y +A + + A
Sbjct: 368 LDEQRAVKYLWLAASNGDSQSRFHLGICYEKG-LGAQRNLGEAVKCYQQAAAMGNEPARE 426
Query: 207 ALGSLFENGDAG 218
L +LF AG
Sbjct: 427 RLRTLFNVEAAG 438
Score = 50.8 bits (120), Expect = 2e-05
Identities = 29/110 (26%), Positives = 57/110 (51%), Gaps = 2/110 (1%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
+A S K+A + G++E LG+++ + +D ++A++Y A D + F LG
Sbjct: 338 RAVSLLKQAADSGLTEAQAFLGVLFT--KEPHLDEQRAVKYLWLAASNGDSQSRFHLGIC 395
Query: 105 YDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVT 154
Y++GLG +N EA+ Y +A + + + L +++ + G + A T
Sbjct: 396 YEKGLGAQRNLGEAVKCYQQAAAMGNEPARERLRTLFNVEAAGPSHLATT 445
Score = 47.4 bits (111), Expect = 3e-04
Identities = 38/165 (23%), Positives = 74/165 (44%), Gaps = 2/165 (1%)
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
G+ A +Y+QK+ + +K Y +G+ E G + + + Y+L A + R
Sbjct: 260 GDYTAAFSYFQKAADRGYSKAQYNVGLCLEHGRGTPRDLSKAILFYHLAAVQGHSLAQYR 319
Query: 207 ALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFF 266
L ++ + D + E A L++A + A LG ++ ++ D Q+A +
Sbjct: 320 YARCLLQSPGSLSDPERERAVSLLKQAADSGLTEAQAFLGVLFTKEPHL--DEQRAVKYL 377
Query: 267 KQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDE 311
A G + S +G Y +G ++L +A+ Y++ MG+E
Sbjct: 378 WLAASNGDSQSRFHLGICYEKGLGAQRNLGEAVKCYQQAAAMGNE 422
>ref|NP_539245.1| (NC_003317) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
gb|AAL51509.1| (AE009475) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
Length = 298
Score = 59.3 bits (142), Expect = 6e-08
Identities = 57/228 (25%), Positives = 94/228 (41%), Gaps = 3/228 (1%)
Query: 37 AYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDRE 96
A++ G Y A + K G + T + IY G G D KKA E+Y A + E
Sbjct: 30 AFQRGLYLTAFNLAKPQAEKGDAASQTLIAEIYARGLGVPADQKKAAEWYGKAAEQGITE 89
Query: 97 GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLG--IIYDRKIKGNADQAVT 154
F L +G ++ Q+A + KA + + +N G ++ K D A
Sbjct: 90 AQFRYAALLLQGTYVQKDPQKAEELMLKAAEGGNAMAQFNYGQMLMVKHPGKPGLDLAFP 149
Query: 155 YYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFEN 214
++QK+ + +A G Y + Y G ++ +++ KA Y + A + A LG
Sbjct: 150 WFQKAADAKLADGEYAISQIYANGTDKIARNDIKARQYLVLAAQRGYDTAQFDLGRWLIE 209
Query: 215 GDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKA 262
G G + ++E F ++ A A L +Y G + D KA
Sbjct: 210 GRGG-ERNYEQGFGWMHLAAQRGTVMAQAWLARLYRDGIGTEGDLVKA 256
>ref|NP_460954.1| (NC_003197) putative TPR repeat protein [Salmonella typhimurium
LT2]
gb|AAL20913.1| (AE008788) putative TPR repeat protein [Salmonella typhimurium LT2]
Length = 564
Score = 58.2 bits (139), Expect = 1e-07
Identities = 37/125 (29%), Positives = 64/125 (50%), Gaps = 2/125 (1%)
Query: 175 YEKGFLEVKQSNHKAVIYYL-KACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKA 233
Y G E + +N+ A + +L ++ + A L + +GD G+ +D + YL KA
Sbjct: 414 YHLGKYEFECTNYDAAMKWLTQSAEQNHPGALLFLAYAYNDGD-GVAQDSKKYLSYLFKA 472
Query: 234 CGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPK 293
L S +G + ++G + K+ +A+ + K++ D G+A + +G MY GD V K
Sbjct: 473 AELGESDAQLEVGYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGDGVEK 532
Query: 294 DLRKA 298
DL KA
Sbjct: 533 DLNKA 537
Score = 46.2 bits (108), Expect = 6e-04
Identities = 33/135 (24%), Positives = 63/135 (46%), Gaps = 4/135 (2%)
Query: 222 DFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRM 281
+++ A +L ++ N+ G L Y G V +D +K ++ +A ++G + + +
Sbjct: 425 NYDAAMKWLTQSAEQNHPGALLFLAYAYNDGDGVAQDSKKYLSYLFKAAELGESDAQLEV 484
Query: 282 GFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKG 337
G++ G+ +PK+L +A ++ D G+ + L MY N KD A +
Sbjct: 485 GYLNLIGEGMPKNLPEAYKWIKKSADQGNAQAHYNLGLMYRNGDGVEKDLNKAKLHLTAA 544
Query: 338 CKLGMKQACENLTKL 352
K G+K A L +L
Sbjct: 545 VKGGVKPALAALKEL 559
>ref|NP_010078.1| (NC_001136) Hypothetical ORF; Ydl203cp [Saccharomyces cerevisiae]
pir||S67762 hypothetical protein YDL203c - yeast (Saccharomyces cerevisiae)
emb|CAA98781.1| (Z74251) ORF YDL203c [Saccharomyces cerevisiae]
emb|CAA67465.1| (X99000) ORF D1066 [Saccharomyces cerevisiae]
Length = 623
Score = 57.8 bits (138), Expect = 2e-07
Identities = 74/302 (24%), Positives = 118/302 (38%), Gaps = 46/302 (15%)
Query: 30 FLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTR-ID--------YK 80
+L + K N KA Y+ KA S+ C + G+ +E +GT +D K
Sbjct: 333 YLPIKNKNIVIKNDEKALEYYCKAAKLNNSDACYRAGVCFEYQRGTSSLDPSPTKEQCIK 392
Query: 81 KALEYYKTACQADDREGCF---GLGGLYDEGLGTTQNYQEAIDAYAKACVL-KHPESCYN 136
KA +YY+ + C G+ LY + T + AI + KA P++ Y
Sbjct: 393 KAFQYYQHGAEVCSNSACMYKLGMSHLYGLNMQKT-DVLLAIKWFDKAAQKGDSPQTLYE 451
Query: 137 LGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKA 196
LG IY+ + Q N A G +++ + A+ YY +
Sbjct: 452 LGKIYEFSVLPPEIQ---------NLLFANG--------------IRKDSQLAIKYYQQC 488
Query: 197 CR-LDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGG---CASLGSMYMLG 252
+ + A LG+ +E GD GL + + + KA G SL Y+ G
Sbjct: 489 AKDFEYPLAQWKLGNCYEFGDLGLPVVAKKSIYWYSKAAAAQPKGNPMAMLSLSGWYLTG 548
Query: 253 --RYVKKDPQKAFNFFKQA--CDMGSAVSCS-RMGFMYSQGDAVPKDLRKALDNYERGCD 307
+K + ++AFN+ ++ C G +GF Y +G DL A Y+R
Sbjct: 549 APNILKPNNKEAFNWALKSSKCSDGKLARTEFALGFYYEKGVGCEVDLDLAKQYYQRAAR 608
Query: 308 MG 309
MG
Sbjct: 609 MG 610
Score = 43.1 bits (100), Expect = 0.005
Identities = 40/149 (26%), Positives = 69/149 (45%), Gaps = 19/149 (12%)
Query: 169 YVLGVAYE-KGFLEVKQSN------HKAVIYYLKACRLDDGQACRALGSLFE--NGDAGL 219
Y++G Y + +L +K N KA+ YY KA +L++ AC G FE G + L
Sbjct: 322 YLMGTLYSHQPYLPIKNKNIVIKNDEKALEYYCKAAKLNNSDACYRAGVCFEYQRGTSSL 381
Query: 220 D------EDFEVAFDYLQKACGLNNSGGCA-SLGSMYMLGRYVKK-DPQKAFNFFKQACD 271
D + + AF Y Q + ++ C LG ++ G ++K D A +F +A
Sbjct: 382 DPSPTKEQCIKKAFQYYQHGAEVCSNSACMYKLGMSHLYGLNMQKTDVLLAIKWFDKAAQ 441
Query: 272 MG-SAVSCSRMGFMYSQGDAVPKDLRKAL 299
G S + +G +Y + +P +++ L
Sbjct: 442 KGDSPQTLYELGKIY-EFSVLPPEIQNLL 469
>ref|XP_134130.1| (XM_134130) similar to Ank repeat containing protein~data
source:Pfam, source key:PF00023, evidence:ISS~putative
[Mus musculus]
Length = 367
Score = 57.8 bits (138), Expect = 2e-07
Identities = 78/304 (25%), Positives = 130/304 (42%), Gaps = 50/304 (16%)
Query: 82 ALEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII 140
AL++ K + D F G LY +EG Y+EA+ + + H ++ Y LG++
Sbjct: 66 ALQFLKERIRRGDAMAYFLRGQLYFEEGW-----YEEALAQFEEIQEKDH-QAIYQLGVM 119
Query: 141 YDRKIK--GNADQAVTYYQK----SCNFDMA---KGCYVLGVAYEKGFLEVKQSNHKAVI 191
Y + NA++ V Y +K SC M Y LG AY +G VK+S+ +A
Sbjct: 120 YYDGLGTIANAEKGVNYMRKILDSSCPQTMHLKFAAAYNLGRAYFEG-KGVKRSDEEAER 178
Query: 192 YYLKACRLDDG------QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASL 245
+L A D+G +A LG + + ++ E AF + +ACG + +L
Sbjct: 179 LWLLAA--DNGNPKASVKAQSILGLFYSMKEP---KELEKAFFWHSEACGNGSLESQGAL 233
Query: 246 GSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPK--DLRKALDNYE 303
G MY G+ +++D A + ++A + G+ + + Y + K K + +Y+
Sbjct: 234 GLMYFYGQGIRQDTDAALHCLREAAERGNVYAQGTLVEYYYKMKFFTKCVSFSKRIADYD 293
Query: 304 RGCDM---GDEVGCF--------ALAGMYYN---------MKDKENAIMIYDKGCKLGMK 343
D+ C A+A Y+ MKD+E+A Y K C+L
Sbjct: 294 EVHDIPMIAHVTDCLPEFIIKGMAMAAFYHGRCLQLGLGIMKDEESAKHYYSKACRLNPT 353
Query: 344 QACE 347
A E
Sbjct: 354 LADE 357
>ref|NP_080554.1| (NM_026278) RIKEN cDNA 2310006J04 [Mus musculus]
dbj|BAB30345.1| (AK016626) Ank repeat containing protein~data source:Pfam, source
key:PF00023, evidence:ISS~putative [Mus musculus]
Length = 346
Score = 57.8 bits (138), Expect = 2e-07
Identities = 78/304 (25%), Positives = 130/304 (42%), Gaps = 50/304 (16%)
Query: 82 ALEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII 140
AL++ K + D F G LY +EG Y+EA+ + + H ++ Y LG++
Sbjct: 45 ALQFLKERIRRGDAMAYFLRGQLYFEEGW-----YEEALAQFEEIQEKDH-QAIYQLGVM 98
Query: 141 YDRKIK--GNADQAVTYYQK----SCNFDMA---KGCYVLGVAYEKGFLEVKQSNHKAVI 191
Y + NA++ V Y +K SC M Y LG AY +G VK+S+ +A
Sbjct: 99 YYDGLGTIANAEKGVNYMRKILDSSCPQTMHLKFAAAYNLGRAYFEG-KGVKRSDEEAER 157
Query: 192 YYLKACRLDDG------QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASL 245
+L A D+G +A LG + + ++ E AF + +ACG + +L
Sbjct: 158 LWLLAA--DNGNPKASVKAQSILGLFYSMKEP---KELEKAFFWHSEACGNGSLESQGAL 212
Query: 246 GSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPK--DLRKALDNYE 303
G MY G+ +++D A + ++A + G+ + + Y + K K + +Y+
Sbjct: 213 GLMYFYGQGIRQDTDAALHCLREAAERGNVYAQGTLVEYYYKMKFFTKCVSFSKRIADYD 272
Query: 304 RGCDM---GDEVGCF--------ALAGMYYN---------MKDKENAIMIYDKGCKLGMK 343
D+ C A+A Y+ MKD+E+A Y K C+L
Sbjct: 273 EVHDIPMIAHVTDCLPEFIIKGMAMAAFYHGRCLQLGLGIMKDEESAKHYYSKACRLNPT 332
Query: 344 QACE 347
A E
Sbjct: 333 LADE 336
>ref|NP_661851.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM72193.1| (AE012860) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 248
Score = 57.8 bits (138), Expect = 2e-07
Identities = 40/172 (23%), Positives = 84/172 (48%), Gaps = 3/172 (1%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
+Y++A + + + G +G +Y+ G G DY +A+++Y+ A D+ +
Sbjct: 66 DYAEALKWLRLSAAKGNDAAEYAIGFMYQKGLGVPQDYAEAMKWYRLAAAKDNDNAQNQI 125
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQKS 159
G LY G G +Y EA+ Y + + + N+G++Y+ + ++ + +A+ +Y+ S
Sbjct: 126 GYLYHHGWGVETDYAEAMKWYRISAAKGNFAAEDNIGVLYEHGQGVEQDYAEAMRWYRIS 185
Query: 160 CNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSL 211
+ +G Y+ G L V+ +KAV +Y A + +A + L ++
Sbjct: 186 AAKGNGEAELNIGNFYQHG-LGVELDLNKAVKWYRSAAAKGNEEAAQKLSAM 236
Score = 57.4 bits (137), Expect = 2e-07
Identities = 45/186 (24%), Positives = 88/186 (47%), Gaps = 12/186 (6%)
Query: 69 YENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVL 128
Y G+ DY +AL++ + + + + +G +Y +GLG Q+Y EA+ Y A
Sbjct: 57 YYYGRDVDRDYAEALKWLRLSAAKGNDAAEYAIGFMYQKGLGVPQDYAEAMKWYRLAAAK 116
Query: 129 KHPESCYNLGIIYDR--KIKGNADQAVTYYQKSCNFDMAKGCYV----LGVAYEKGFLEV 182
+ + +G +Y ++ + +A+ +Y+ S AKG + +GV YE G V
Sbjct: 117 DNDNAQNQIGYLYHHGWGVETDYAEAMKWYRISA----AKGNFAAEDNIGVLYEHG-QGV 171
Query: 183 KQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGC 242
+Q +A+ +Y + +G+A +G+ +++G G++ D A + + A N
Sbjct: 172 EQDYAEAMRWYRISAAKGNGEAELNIGNFYQHG-LGVELDLNKAVKWYRSAAAKGNEEAA 230
Query: 243 ASLGSM 248
L +M
Sbjct: 231 QKLSAM 236
>ref|NP_274346.1| (NC_003112) conserved hypothetical protein [Neisseria meningitidis
MC58]
pir||B81095 conserved hypothetical protein NMB1327 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF41702.1| (AE002481) conserved hypothetical protein [Neisseria meningitidis
MC58]
Length = 467
Score = 57.4 bits (137), Expect = 2e-07
Identities = 63/297 (21%), Positives = 114/297 (38%), Gaps = 54/297 (18%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDY---------------------- 79
++ A ++K+ G+ E QLG+ Y GQGT++D
Sbjct: 156 DFETAHLLYRKSAAQGLPEAHWQLGLQYRFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPL 215
Query: 80 ---------KKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKH 130
+A+ +++ A Q +D + L +Y +G +N++ A+ A +H
Sbjct: 216 AELILPTAPDEAVHWFQQAAQENDPDAHAALADIYLQGKHLERNHKLALHHAEAAAAERH 275
Query: 131 PESCYNLGII--YDRKIKGNADQAVTYYQKSCNFDMAKGCYVL----GVAYEKGFLEVKQ 184
PE LG I Y I + ++A YY+++ L + + + +K
Sbjct: 276 PEGLRILGDICRYGLGIAPDTEKARHYYRQAAEAGSLSAYQKLISDSALNHPDQYGGIKD 335
Query: 185 S---NHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGG 241
S +A Y KA L G C ++ A +A L +S
Sbjct: 336 SAIRRQRAERLYQKAQALHYGLQCA--------------PEYAAALKLYTEAAELGHSKA 381
Query: 242 CASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKA 298
+LGSMY G+ + D +A +F++A +++ + ++ G V D KA
Sbjct: 382 QTNLGSMYYFGQGMTADYNEARKWFEKAAAKKDSMAFYNLACIHYSGHGVEPDKEKA 438
Score = 47.4 bits (111), Expect = 3e-04
Identities = 45/205 (21%), Positives = 92/205 (43%), Gaps = 25/205 (12%)
Query: 79 YKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLG 138
+++ALE+ KT+ + ++ G + L GT +++ A Y K+ PE+ + LG
Sbjct: 123 FEEALEWAKTSAKNNNPHGQYLLAQYCR--YGTPPDFETAHLLYRKSAAQGLPEAHWQLG 180
Query: 139 IIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGF---------LEVKQSNHKA 189
+ Y + + D A+ L A ++G+ L + + +A
Sbjct: 181 LQY-------------RFGQGTKVDTAQAVNHLRAAAQQGYIPAYTPLAELILPTAPDEA 227
Query: 190 VIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMY 249
V ++ +A + +D A AL ++ G L+ + ++A + + A + G LG +
Sbjct: 228 VHWFQQAAQENDPDAHAALADIYLQG-KHLERNHKLALHHAEAAAAERHPEGLRILGDIC 286
Query: 250 MLGRYVKKDPQKAFNFFKQACDMGS 274
G + D +KA ++++QA + GS
Sbjct: 287 RYGLGIAPDTEKARHYYRQAAEAGS 311
>ref|NP_103302.1| (NC_002678) unknown protein [Mesorhizobium loti]
dbj|BAB49088.1| (AP002998) unknown protein [Mesorhizobium loti]
Length = 716
Score = 57.4 bits (137), Expect = 2e-07
Identities = 57/241 (23%), Positives = 89/241 (36%), Gaps = 37/241 (15%)
Query: 79 YKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLG 138
Y A +Y+ A +G + G+G +Y A D Y +A L + + ++G
Sbjct: 447 YSWAEHFYELAGNQQYSAALINMGYMARVGMGREIDYGRAFDPYVRAAALGNLRARTDIG 506
Query: 139 IIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACR 198
Y I G V + + V++Y A
Sbjct: 507 SAY---IAGQG--------------------------------VPKLPEEGVLWYRLAAS 531
Query: 199 LDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKD 258
A ALG + G G+ +D+ A A A+LG Y+ G VKKD
Sbjct: 532 SGWANAITALGDAYRLG-TGVKQDYVQAASLYSAAADTGQIDAMANLGQAYLAGEGVKKD 590
Query: 259 PQKAFNFFKQACDMGSAVSCSRMGFMYSQGD-AVPKDLRKALDNYERGCDMGDEVGCFAL 317
+ ++A DMG+ + M +Y +GD +P D R+AL E + G+E L
Sbjct: 591 VPRGLELLQRANDMGNRYAPYFMAQLYLKGDRKLPADPRRALALLELSANRGNEYAYVRL 650
Query: 318 A 318
A
Sbjct: 651 A 651
Score = 53.1 bits (126), Expect = 5e-06
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 1/129 (0%)
Query: 193 YLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLG 252
Y++A L + +A +GS + G G+ + E + + A + +LG Y LG
Sbjct: 490 YVRAAALGNLRARTDIGSAYIAGQ-GVPKLPEEGVLWYRLAASSGWANAITALGDAYRLG 548
Query: 253 RYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEV 312
VK+D +A + + A D G + + +G Y G+ V KD+ + L+ +R DMG+
Sbjct: 549 TGVKQDYVQAASLYSAAADTGQIDAMANLGQAYLAGEGVKKDVPRGLELLQRANDMGNRY 608
Query: 313 GCFALAGMY 321
+ +A +Y
Sbjct: 609 APYFMAQLY 617
Score = 46.6 bits (109), Expect = 4e-04
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 218 GLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVS 277
G + D+ AFD +A L N +GS Y+ G+ V K P++ +++ A G A +
Sbjct: 478 GREIDYGRAFDPYVRAAALGNLRARTDIGSAYIAGQGVPKLPEEGVLWYRLAASSGWANA 537
Query: 278 CSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYY 322
+ +G Y G V +D +A Y D G ++ A G Y
Sbjct: 538 ITALGDAYRLGTGVKQDYVQAASLYSAAADTG-QIDAMANLGQAY 581
>ref|NP_102363.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB48149.1| (AP002995) hypothetical protein [Mesorhizobium loti]
Length = 577
Score = 57.0 bits (136), Expect = 3e-07
Identities = 63/296 (21%), Positives = 112/296 (37%), Gaps = 8/296 (2%)
Query: 24 GKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKAL 83
GK + L + A K +++ A + KA G + G LG I +G + D A
Sbjct: 102 GKGPSEHLFKPDSAGKP-DFTAAFDFATKAAEAGSATGQAILGYILTSGPASMRDADAAH 160
Query: 84 EYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDR 143
+Y+ + A EGC G L G +N + +A P + Y L ++ +
Sbjct: 161 RWYEKSASAGCAEGCLGFA-LSLARRGKRENRVRIAEEVRRAADAGLPTATYLLAVLTEH 219
Query: 144 KIKGNADQAVT--YYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD 201
+ D A YQ + + + LG+A G L V Q + +A +
Sbjct: 220 GLGVARDMAAAAQLYQAAAEKGLPSAQFRLGLALIDGAL-VGQDVAAGEAWMRRAALAGN 278
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
+A LG DF A ++ ++A + +L S+Y+ G V +D ++
Sbjct: 279 IEAAYLLGDRHAKTQR---PDFAEAANWYRRAAEAGHQAAARALASLYLTGNGVAEDVEE 335
Query: 262 AFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFAL 317
+ + + G+ + + + + G P D +E GD + F L
Sbjct: 336 GARWLRSSASAGNQQAQTDLANLILGGAGEPDDGASVAGWFEAAASSGDLIAAFNL 391
Score = 48.5 bits (114), Expect = 1e-04
Identities = 66/330 (20%), Positives = 130/330 (39%), Gaps = 21/330 (6%)
Query: 31 LGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTAC 90
L + + A + + ++ ++A G E LG + Q R D+ +A +Y+ A
Sbjct: 251 LALIDGALVGQDVAAGEAWMRRAALAGNIEAAYLLGDRHAKTQ--RPDFAEAANWYRRAA 308
Query: 91 QADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD 150
+A + L LY G G ++ +E + + ++ +L + I G A
Sbjct: 309 EAGHQAAARALASLYLTGNGVAEDVEEGARWLRSSASAGNQQAQTDLANL----ILGGAG 364
Query: 151 Q------AVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQA 204
+ +++ + + + LG+ + KG + V+Q +A ++L+ +A
Sbjct: 365 EPDDGASVAGWFEAAASSGDLIAAFNLGLCFAKG-VGVRQDEGQAA-HWLRRAAEGVAEA 422
Query: 205 CRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFN 264
L ++G G+ D A + +A +L M + GR +P+ A
Sbjct: 423 QYMYARLLQDG-RGVAADPTQARVWFARAADAGVLDARVALAEMLLNGRGGMPEPEAAMQ 481
Query: 265 FFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDE-----VGCFALAG 319
F+QA G A + +G +Y G +P D A Y G +G + L G
Sbjct: 482 LFEQAAADGHAGAMFAIGALYGAGHGLPLDQTTAQKWYAAAAGRGHSQAQFMLGRYLLKG 541
Query: 320 MYYNMKDKENAIMIYDKGCKLGMKQACENL 349
+ +D A + ++ G+ +A + L
Sbjct: 542 L-AGERDPVAARLWLERAAAHGISEAADEL 570
>ref|NP_596825.1| (NC_003423) hypothetical protein [Schizosaccharomyces pombe]
pir||T39470 hypothetical protein SPBC1539.11c - fission yeast
(Schizosaccharomyces pombe) (fragment)
emb|CAB51343.1| (AL096874) hypothetical protein [Schizosaccharomyces pombe]
Length = 346
Score = 56.6 bits (135), Expect = 4e-07
Identities = 60/256 (23%), Positives = 106/256 (40%), Gaps = 21/256 (8%)
Query: 116 QEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAY 175
Q A D Y+ + L + S Y LG++ + +GN ++AV Y++K + + + C+ L +
Sbjct: 13 QRAWDLYSSSANLGYTRSLYRLGVLLED--QGNLEEAVEYFEKGVSENDSACCWRLSLLI 70
Query: 176 EKGFLE---VKQSNHKAVIYYLKA------CRLDDGQACRALGSLFENG---DAGLDE-- 221
+G L+ H + + L+ + G AL +L E+ D G +
Sbjct: 71 LEGMLDGVGEYAHRHASGLELLERSADTADADVPSGLYSHALVNLHEHPGLVDLGSENIR 130
Query: 222 ---DFEVAFDYLQKACGLNNSGGCASLGSMYMLGRY-VKKDPQKAFNFFKQACDMGSAVS 277
D A KA L +S +G++Y G+Y P+ + ++ A G +
Sbjct: 131 VPIDEATALKSFAKAAFLGHSSAQLRMGAVYEFGKYGCPVVPRYSLFYYSAAAKRGETEA 190
Query: 278 CSRMGFMYSQG-DAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKENAIMIYDK 336
+ Y G D +P D A + ER G+ F + ++ + E A Y++
Sbjct: 191 DLAVAKWYLNGSDGIPVDEDLAFMHAERASMAGNANAQFLMGYLFDTRGNTEQATYWYNE 250
Query: 337 GCKLGMKQACENLTKL 352
K G +A E L L
Sbjct: 251 AAKAGHSEAIERLALL 266
Score = 43.9 bits (102), Expect = 0.003
Identities = 50/264 (18%), Positives = 106/264 (39%), Gaps = 29/264 (10%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGL 104
+A + + N G + +LG++ E+ QG + ++A+EY++ +D C+ L L
Sbjct: 14 RAWDLYSSSANLGYTRSLYRLGVLLED-QG---NLEEAVEYFEKGVSENDSACCWRLSLL 69
Query: 105 YDEG-LGTTQNYQ-------EAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD------ 150
EG L Y E ++ A P Y+ ++ + G D
Sbjct: 70 ILEGMLDGVGEYAHRHASGLELLERSADTADADVPSGLYSHALVNLHEHPGLVDLGSENI 129
Query: 151 -------QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQ 203
A+ + K+ + +G YE G ++ YY A + + +
Sbjct: 130 RVPIDEATALKSFAKAAFLGHSSAQLRMGAVYEFGKYGCPVVPRYSLFYYSAAAKRGETE 189
Query: 204 ACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAF 263
A A+ + NG G+ D ++AF + ++A N+ +G ++ + + ++A
Sbjct: 190 ADLAVAKWYLNGSDGIPVDEDLAFMHAERASMAGNANAQFLMGYLF----DTRGNTEQAT 245
Query: 264 NFFKQACDMGSAVSCSRMGFMYSQ 287
++ +A G + + R+ + +Q
Sbjct: 246 YWYNEAAKAGHSEAIERLALLENQ 269
>ref|NP_405544.1| (NC_003143) putative exported protein [Yersinia pestis]
emb|CAC90802.1| (AJ414150) putative exported protein [Yersinia pestis]
Length = 720
Score = 56.2 bits (134), Expect = 6e-07
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 4/136 (2%)
Query: 221 EDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSR 280
+D++ +L+K+ N L MY G VK+D K F++ +A +G + +
Sbjct: 581 QDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYLLKAAQLGLSDAQVE 640
Query: 281 MGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDK 336
+G++Y G+ V K+L +A + + + G+ + L +Y N K+ + A +
Sbjct: 641 IGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIYQNGDGTEKNLDKAKFHFTV 700
Query: 337 GCKLGMKQACENLTKL 352
K GM++A E L KL
Sbjct: 701 AAKSGMREAYEELKKL 716
Score = 53.1 bits (126), Expect = 5e-06
Identities = 29/91 (31%), Positives = 49/91 (52%), Gaps = 1/91 (1%)
Query: 208 LGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFK 267
L ++ GD G+ ED F YL KA L S +G +Y++G V+K+ +A+ +
Sbjct: 605 LAQMYNEGD-GVKEDQTKYFSYLLKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHI 663
Query: 268 QACDMGSAVSCSRMGFMYSQGDAVPKDLRKA 298
+A + G+ + +G++Y GD K+L KA
Sbjct: 664 KAAEQGNVHAHYNLGWIYQNGDGTEKNLDKA 694
Score = 44.3 bits (103), Expect = 0.002
Identities = 30/115 (26%), Positives = 48/115 (41%)
Query: 27 DNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYY 86
DN+ + + Y +Y + + +K+ + + L +Y G G + D K Y
Sbjct: 567 DNAQYELGKYHYTCQDYDRGLKWLEKSADHKNIKALFLLAQMYNEGDGVKEDQTKYFSYL 626
Query: 87 KTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY 141
A Q + +G LY G G +N EA + KA + + YNLG IY
Sbjct: 627 LKAAQLGLSDAQVEIGYLYLVGEGVEKNLPEAYQWHIKAAEQGNVHAHYNLGWIY 681
>ref|XP_003620.2| (XM_003620) similar to hypothetical protein DKFZp761O0113 [Homo
sapiens]
Length = 347
Score = 56.2 bits (134), Expect = 6e-07
Identities = 62/227 (27%), Positives = 105/227 (45%), Gaps = 37/227 (16%)
Query: 81 KALEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGI 139
KAL+ K D F G LY +EG Y+EA++ + + H ++ Y LG+
Sbjct: 45 KALQLLKERILKGDTLAYFLRGQLYFEEGW-----YEEALEQFEEIKEKDH-QATYQLGV 98
Query: 140 IYDRKIKG--NADQAVTYYQKSCNFDMAKG-------CYVLGVAYEKGFLEVKQSNHKAV 190
+Y + +A++ V Y +K + K Y LG AY +G VK+SN +A
Sbjct: 99 MYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEG-KGVKRSNEEAE 157
Query: 191 IYYLKACRLDDG------QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCAS 244
+L A D+G +A LG + + ++ E AF + +ACG N +
Sbjct: 158 RLWLIAA--DNGNPKASVKAQSMLGLYYSTKEP---KELEKAFYWHSEACGNGNLESQGA 212
Query: 245 LGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAV 291
LG MY+ G+ +++D + A ++A + G+ +Y+QG+ V
Sbjct: 213 LGLMYLYGQGIRQDTEAALQCLREAAERGN---------VYAQGNLV 250
Score = 45.4 bits (106), Expect = 0.001
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDRE- 96
++ G Y +A F++ + + QLG++Y +G GT +D +K ++Y K + +
Sbjct: 70 FEEGWYEEALEQFEEI-KEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKA 128
Query: 97 ------GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYN----LGIIYDRKIK 146
+ LG Y EG G ++ +EA + A +P++ LG+ Y K
Sbjct: 129 RHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEP 188
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKG 178
++A ++ ++C + LG+ Y G
Sbjct: 189 KELEKAFYWHSEACGNGNLESQGALGLMYLYG 220
>dbj|BAA92563.1| (AB037746) KIAA1325 protein [Homo sapiens]
Length = 354
Score = 56.2 bits (134), Expect = 6e-07
Identities = 62/227 (27%), Positives = 105/227 (45%), Gaps = 37/227 (16%)
Query: 81 KALEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGI 139
KAL+ K D F G LY +EG Y+EA++ + + H ++ Y LG+
Sbjct: 52 KALQLLKERILKGDTLAYFLRGQLYFEEGW-----YEEALEQFEEIKEKDH-QATYQLGV 105
Query: 140 IYDRKIKG--NADQAVTYYQKSCNFDMAKG-------CYVLGVAYEKGFLEVKQSNHKAV 190
+Y + +A++ V Y +K + K Y LG AY +G VK+SN +A
Sbjct: 106 MYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEG-KGVKRSNEEAE 164
Query: 191 IYYLKACRLDDG------QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCAS 244
+L A D+G +A LG + + ++ E AF + +ACG N +
Sbjct: 165 RLWLIAA--DNGNPKASVKAQSMLGLYYSTKEP---KELEKAFYWHSEACGNGNLESQGA 219
Query: 245 LGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAV 291
LG MY+ G+ +++D + A ++A + G+ +Y+QG+ V
Sbjct: 220 LGLMYLYGQGIRQDTEAALQCLREAAERGN---------VYAQGNLV 257
Score = 45.4 bits (106), Expect = 0.001
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDRE- 96
++ G Y +A F++ + + QLG++Y +G GT +D +K ++Y K + +
Sbjct: 77 FEEGWYEEALEQFEEI-KEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKA 135
Query: 97 ------GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYN----LGIIYDRKIK 146
+ LG Y EG G ++ +EA + A +P++ LG+ Y K
Sbjct: 136 RHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEP 195
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKG 178
++A ++ ++C + LG+ Y G
Sbjct: 196 KELEKAFYWHSEACGNGNLESQGALGLMYLYG 227
>ref|NP_060879.1| (NM_018409) hypothetical protein DKFZp761O0113 [Homo sapiens]
pir||T47138 hypothetical protein DKFZp761O0113.1 - human
emb|CAB82313.1| (AL161975) hypothetical protein [Homo sapiens]
Length = 321
Score = 56.2 bits (134), Expect = 6e-07
Identities = 62/227 (27%), Positives = 105/227 (45%), Gaps = 37/227 (16%)
Query: 81 KALEYYKTACQADDREGCFGLGGLY-DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGI 139
KAL+ K D F G LY +EG Y+EA++ + + H ++ Y LG+
Sbjct: 19 KALQLLKERILKGDTLAYFLRGQLYFEEGW-----YEEALEQFEEIKEKDH-QATYQLGV 72
Query: 140 IYDRKIKG--NADQAVTYYQKSCNFDMAKG-------CYVLGVAYEKGFLEVKQSNHKAV 190
+Y + +A++ V Y +K + K Y LG AY +G VK+SN +A
Sbjct: 73 MYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEG-KGVKRSNEEAE 131
Query: 191 IYYLKACRLDDG------QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCAS 244
+L A D+G +A LG + + ++ E AF + +ACG N +
Sbjct: 132 RLWLIAA--DNGNPKASVKAQSMLGLYYSTKEP---KELEKAFYWHSEACGNGNLESQGA 186
Query: 245 LGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAV 291
LG MY+ G+ +++D + A ++A + G+ +Y+QG+ V
Sbjct: 187 LGLMYLYGQGIRQDTEAALQCLREAAERGN---------VYAQGNLV 224
Score = 45.4 bits (106), Expect = 0.001
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDRE- 96
++ G Y +A F++ + + QLG++Y +G GT +D +K ++Y K + +
Sbjct: 44 FEEGWYEEALEQFEEI-KEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKA 102
Query: 97 ------GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYN----LGIIYDRKIK 146
+ LG Y EG G ++ +EA + A +P++ LG+ Y K
Sbjct: 103 RHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEP 162
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKG 178
++A ++ ++C + LG+ Y G
Sbjct: 163 KELEKAFYWHSEACGNGNLESQGALGLMYLYG 194
>gb|AAH30908.1| (BC030908) Unknown (protein for IMAGE:4504268) [Mus musculus]
Length = 292
Score = 54.3 bits (129), Expect = 2e-06
Identities = 71/282 (25%), Positives = 117/282 (41%), Gaps = 54/282 (19%)
Query: 103 GLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIK--GNADQAVTYYQK-- 158
G Y+E L + QE K ++ Y LG++Y + NA++ V Y +K
Sbjct: 18 GWYEEALAQFEEIQE-----------KDHQAIYQLGVMYYDGLGTIANAEKGVNYMRKIL 66
Query: 159 --SCNFDMA---KGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDG------QACRA 207
SC M Y LG AY +G VK+S+ +A +L A D+G +A
Sbjct: 67 DSSCPQTMHLKFAAAYNLGRAYFEG-KGVKRSDEEAERLWLLAA--DNGNPKASVKAQSI 123
Query: 208 LGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFK 267
LG + + ++ E AF + +ACG + +LG MY G+ +++D A + +
Sbjct: 124 LGLFYSMKEP---KELEKAFFWHSEACGNGSLESQGALGLMYFYGQGIRQDTDAALHCLR 180
Query: 268 QACDMGSAVSCSRMGFMYSQGDAVPK--DLRKALDNYERGCDM---GDEVGCF------- 315
+A + G+ + + Y + K K + +Y+ D+ C
Sbjct: 181 EAAERGNVYAQGTLVEYYYKMKFFTKCVSFSKRIADYDEVHDIPMIAHVTDCLPEFIIKG 240
Query: 316 -ALAGMYYN---------MKDKENAIMIYDKGCKLGMKQACE 347
A+A Y+ MKD+E+A Y K C+L A E
Sbjct: 241 MAMAAFYHGRCLQLGLGIMKDEESAKHYYSKACRLNPTLADE 282
>ref|NP_104918.1| (NC_002678) hypothetical protein [Mesorhizobium loti]
dbj|BAB50704.1| (AP003003) hypothetical protein [Mesorhizobium loti]
Length = 346
Score = 54.3 bits (129), Expect = 2e-06
Identities = 59/226 (26%), Positives = 90/226 (39%), Gaps = 17/226 (7%)
Query: 79 YKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESC--YN 136
YK A T Q D + + GLG N EA YA A PE+ Y
Sbjct: 86 YKTAYNLALTRAQNGDPAAQTLVAEILSRGLGVPLNAAEASKWYALAAEQGVPEAQFQYA 145
Query: 137 LGIIYDRKIKGNADQAVTYYQKSCN-------FDMAKGCYVLGVAYEKGFLEVKQSNHKA 189
L ++ R +K + +A Q + F+ A+ + V + G + KA
Sbjct: 146 LMLLDGRYVKKDPKEAYALMQAAAEAGNQLAQFNFAQ----MLVRQDPGDTGLA----KA 197
Query: 190 VIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMY 249
V YY +A A A+ ++ NG G D A +L +A N L +
Sbjct: 198 VSYYERAAATGLADAQYAMSQIYANGVGGKPRDDAQARRFLAQAARQNYDTAQIDLAAWM 257
Query: 250 MLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDL 295
+ GR +D + AF + KQA + G+ + +R+ +Y QG DL
Sbjct: 258 IEGRGGARDLKSAFGWTKQAAEGGNVAAQNRLAKLYMQGIGTDPDL 303
Score = 42.7 bits (99), Expect = 0.006
Identities = 24/76 (31%), Positives = 39/76 (50%)
Query: 248 MYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
M + GRYVKKDP++A+ + A + G+ ++ M + D L KA+ YER
Sbjct: 147 MLLDGRYVKKDPKEAYALMQAAAEAGNQLAQFNFAQMLVRQDPGDTGLAKAVSYYERAAA 206
Query: 308 MGDEVGCFALAGMYYN 323
G +A++ +Y N
Sbjct: 207 TGLADAQYAMSQIYAN 222
>ref|NP_585810.1| (NC_003233) putative SKT5-like protein [Encephalitozoon cuniculi]
emb|CAD25414.1| (AL590446) putative SKT5-like protein [Encephalitozoon cuniculi]
Length = 388
Score = 53.9 bits (128), Expect = 3e-06
Identities = 48/185 (25%), Positives = 84/185 (44%), Gaps = 9/185 (4%)
Query: 58 VSEGCTQLGIIYENGQ-GTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQ 116
+SE T +G+ YE G G R D + A+ YY +A + + G F +G ++G+G +N++
Sbjct: 95 LSEAQTYMGLGYEFGLFGLRKDGRMAIGYYSSAARQNHPVGTFRMGQCLEKGIGKPRNHR 154
Query: 117 EAIDAYAKACVLKHPESCYNLG-IIYDRKIKGNAD-QAVTYYQKSCNFDMAK----GCYV 170
A+D Y + L + G I+ + I D Q+ +Y K +K Y
Sbjct: 155 HALDFYRCSAKLGFVVGMHAYGSILINGDIGSKKDLQSGLFYLKLAARKASKEYPYPYYD 214
Query: 171 LGVAYEKGFL--EVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFD 228
L YE E++ + A YL+ LD + +E G+ D++ VA +
Sbjct: 215 LAQTYESSTAPSEIQPDDEYAFRMYLRGAELDCPNCQYRVARCYELGELMQDKNLPVAVE 274
Query: 229 YLQKA 233
+ ++A
Sbjct: 275 WYRRA 279
Score = 43.9 bits (102), Expect = 0.003
Identities = 51/254 (20%), Positives = 101/254 (39%), Gaps = 10/254 (3%)
Query: 46 ATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLY 105
A Y+ A G ++G E G G +++ AL++Y+ + + G G +
Sbjct: 120 AIGYYSSAARQNHPVGTFRMGQCLEKGIGKPRNHRHALDFYRCSAKLGFVVGMHAYGSIL 179
Query: 106 DEG-LGTTQNYQEA---IDAYAKACVLKHPESCYNLGIIYD-----RKIKGNADQAVTYY 156
G +G+ ++ Q + A+ ++P Y+L Y+ +I+ + + A Y
Sbjct: 180 INGDIGSKKDLQSGLFYLKLAARKASKEYPYPYYDLAQTYESSTAPSEIQPDDEYAFRMY 239
Query: 157 QKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS-LFENG 215
+ D Y + YE G L ++ AV +Y +A L A LF
Sbjct: 240 LRGAELDCPNCQYRVARCYELGELMQDKNLPVAVEWYRRASLLGQIDAQMIYSRILFTGV 299
Query: 216 DAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSA 275
+ + + + +F + KA +S S+ G K+ A ++ + + G+
Sbjct: 300 EEAVQPNLKESFFWALKAAVRGHSQAAFSVAEFIETGCGTSKNTFLALWWYTISYESGNT 359
Query: 276 VSCSRMGFMYSQGD 289
+ SR+ + +Q D
Sbjct: 360 QAKSRLMILQNQID 373
>ref|NP_439767.1| (NC_000907) H. influenzae predicted coding region HI1625
[Haemophilus influenzae Rd]
sp|P44277|YG25_HAEIN Hypothetical protein HI1625
pir||H64038 hypothetical protein HI1625 - Haemophilus influenzae (strain Rd
KW20)
gb|AAC23273.1| (U32835) H. influenzae predicted coding region HI1625 [Haemophilus
influenzae Rd]
Length = 165
Score = 53.5 bits (127), Expect = 4e-06
Identities = 36/131 (27%), Positives = 58/131 (43%), Gaps = 5/131 (3%)
Query: 201 DGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQ 260
D QA L F N +D F+ + N ++LG +Y LGR +D +
Sbjct: 33 DDQARMNLAQEFANKQQWID-----VFNIMYPMALEGNITAQSNLGMLYNLGRGTVRDYE 87
Query: 261 KAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGM 320
KA+ +F +A + GS + +G MY +GD V ++ +A+ +ER D L+ +
Sbjct: 88 KAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLFERTAQAKDTDAMMMLSNI 147
Query: 321 YYNMKDKENAI 331
Y E I
Sbjct: 148 YRLQNQPEKII 158
Score = 44.3 bits (103), Expect = 0.002
Identities = 28/95 (29%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 63 TQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAY 122
+ LG++Y G+GT DY+KA ++ A + +G LG +Y G QN ++AI +
Sbjct: 70 SNLGMLYNLGRGTVRDYEKAYWWFSEAAEKGSVKGLNNLGVMYLRGDYVKQNTEQAIKLF 129
Query: 123 AKACVLKHPESCYNLGIIY-----DRKIKGNADQA 152
+ K ++ L IY KI G A+++
Sbjct: 130 ERTAQAKDTDAMMMLSNIYRLQNQPEKIIGMAEES 164
>gb|AAG30966.1|AC012396_2 (AC012396) hypothetical protein, 3' partial [Arabidopsis thaliana]
Length = 392
Score = 53.5 bits (127), Expect = 4e-06
Identities = 26/81 (32%), Positives = 42/81 (51%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
NY+KA YF+ A N+ G LG++Y G G + D + A +Y+ A A + + L
Sbjct: 293 NYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQL 352
Query: 102 GGLYDEGLGTTQNYQEAIDAY 122
++ G+G T+N + A Y
Sbjct: 353 AKMFHTGVGLTKNLEMATTFY 373
Score = 50.8 bits (120), Expect = 2e-05
Identities = 38/167 (22%), Positives = 72/167 (42%), Gaps = 7/167 (4%)
Query: 143 RKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDG 202
RK +G D+ + + + +G+ Y G +++ + KA+ ++ KA
Sbjct: 221 RKSRGEEDEDFQILEYQAEKGNSVAMHKIGLFYYFGLRGLRRDHAKALYWFSKA------ 274
Query: 203 QACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKA 262
LG L+ G ++ A +Y + A + G +LG +Y+ G VKKD + A
Sbjct: 275 -EFNGLGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHYNLGVLYLKGTGVKKDVRHA 333
Query: 263 FNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMG 309
+F A + G + ++ M+ G + K+L A Y+ + G
Sbjct: 334 TKYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYKLVAERG 380
Score = 50.4 bits (119), Expect = 3e-05
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 10/119 (8%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGT-RIDYKKALEYYKTACQADDREGCFG 100
+++KA +F KA +G LG +Y G G + +Y KA EY++ A +D G +
Sbjct: 263 DHAKALYWFSKAEFNG-------LGYLYVKGYGVDKRNYTKAREYFEMAANNEDPSGHYN 315
Query: 101 LGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKI--KGNADQAVTYYQ 157
LG LY +G G ++ + A + A P++ Y L ++ + N + A T+Y+
Sbjct: 316 LGVLYLKGTGVKKDVRHATKYFFVAANAGQPKAFYQLAKMFHTGVGLTKNLEMATTFYK 374
>ref|NP_588282.1| (NC_003421) hypothetical protein [Schizosaccharomyces pombe]
pir||T41340 hypothetical protein SPCC417.05c - fission yeast
(Schizosaccharomyces pombe)
emb|CAA22651.1| (AL035076) hypothetical protein [Schizosaccharomyces pombe]
Length = 512
Score = 52.8 bits (125), Expect = 6e-06
Identities = 56/229 (24%), Positives = 92/229 (39%), Gaps = 23/229 (10%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQ-GTRIDYKKALEYYKTACQADDRE 96
Y + S+ S+F G SE L + Y G T I+ K+A YK A + +
Sbjct: 209 YLTSFVSQGNSFF------GYSEALYLLAVCYGTGALRTEINEKEAYRLYKMAADLNHVQ 262
Query: 97 GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDR---KIKGNADQAV 153
+ + G G TQN +EAI + +A +H + + + +IY R +K + +A+
Sbjct: 263 AAYRVAICLQMGFGVTQNTEEAIHYFFRAASGQHVGAMHRMALIYFRGLMSVKRDPVKAM 322
Query: 154 TYYQ----------KSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQ 203
Y +D+A+ Y G +Y G LE+ S KA + Y A +
Sbjct: 323 YYLNLGALEADHEFPQALYDLAE-LYEHGSSYLDGLLEL--SPRKAFVLYHIAAKYGLKD 379
Query: 204 ACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLG 252
A + FE G D + +F + ++ N L Y+ G
Sbjct: 380 AQLRVARCFELGQLECDINLVRSFVWYRRLARKRNPEAMWKLSQFYLNG 428
>ref|XP_130572.1| (XM_130572) similar to dJ842G6.2 (novel protein imilar to SEL1L
(sel-1 (suppressor of lin-12, C.elegans)-like)) [Mus
musculus]
Length = 273
Score = 52.4 bits (124), Expect = 8e-06
Identities = 59/269 (21%), Positives = 103/269 (37%), Gaps = 41/269 (15%)
Query: 68 IYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACV 127
+Y +G G DYK A +Y+ A Q+ + L +Y G G ++ + A++ Y C
Sbjct: 1 MYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCE 60
Query: 128 LKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNH 187
L H A++ +T Y + D+ + E G+ EV QSN
Sbjct: 61 LGH-----------------WAEKFLTAYFAYKDGDIDSSLIQYALLAEMGY-EVAQSNS 102
Query: 188 KAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGS 247
++ KA L G ++ + +A +A N+ +G
Sbjct: 103 AFILESKKAKIL------------------GKEKLYPMALLLWNRAAIQGNAFARVKIGD 144
Query: 248 MYMLGRYVKKDPQKAFNFFKQACDM-GSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGC 306
+ G KKD + A + A D SA + + +MY G + KD+ A Y
Sbjct: 145 YHYYGYGTKKDYETAATHYSIAADKHHSAQAMFNLAYMYEHGLGIAKDIHLARRLY---- 200
Query: 307 DMGDEVGCFALAGMYYNMKDKENAIMIYD 335
DM + A +++ + E +++D
Sbjct: 201 DMAAQTSPDAHIPVFFALMKLETMHLLHD 229
Score = 43.9 bits (102), Expect = 0.003
Identities = 28/101 (27%), Positives = 48/101 (46%)
Query: 248 MYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCD 307
MY G V KD + AF +F A G ++ + MY+ G V + R A++ Y+ C+
Sbjct: 1 MYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCE 60
Query: 308 MGDEVGCFALAGMYYNMKDKENAIMIYDKGCKLGMKQACEN 348
+G F A Y D +++++ Y ++G + A N
Sbjct: 61 LGHWAEKFLTAYFAYKDGDIDSSLIQYALLAEMGYEVAQSN 101
>ref|NP_245305.1| (NC_002663) unknown [Pasteurella multocida]
gb|AAK02452.1| (AE006073) unknown [Pasteurella multocida]
Length = 242
Score = 52.4 bits (124), Expect = 8e-06
Identities = 35/129 (27%), Positives = 59/129 (45%), Gaps = 3/129 (2%)
Query: 65 LGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAK 124
LGI+Y GQG D++KA ++ A + + L Y +G G Q+ + +I + K
Sbjct: 94 LGILYARGQGVPQDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIRHSITLFEK 153
Query: 125 ACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQ 184
++ LG IY+ ++ QA +Y+K+ + L V YE G E +
Sbjct: 154 TANSGSLDAMLVLGQIYENEL-NQMTQAFKWYKKAAEAGNHDAQFRLAVMYENG--EGTK 210
Query: 185 SNHKAVIYY 193
N K +Y+
Sbjct: 211 KNKKQAVYW 219
Score = 50.4 bits (119), Expect = 3e-05
Identities = 29/104 (27%), Positives = 51/104 (48%), Gaps = 1/104 (0%)
Query: 243 ASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNY 302
A+LG +Y G+ V +D +KA+ +F +A + GS + + + Y QG V +D+R ++ +
Sbjct: 92 ANLGILYARGQGVPQDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIRHSITLF 151
Query: 303 ERGCDMGDEVGCFALAGMYYN-MKDKENAIMIYDKGCKLGMKQA 345
E+ + G L +Y N + A Y K + G A
Sbjct: 152 EKTANSGSLDAMLVLGQIYENELNQMTQAFKWYKKAAEAGNHDA 195
Score = 49.7 bits (117), Expect = 5e-05
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 201 DGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQ 260
D QA LG L+ G G+ +DFE A+ + +A + +L Y+ G VK+D +
Sbjct: 87 DYQAQANLGILYARGQ-GVPQDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIR 145
Query: 261 KAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGM 320
+ F++ + GS + +G +Y + + +A Y++ + G+ F LA M
Sbjct: 146 HSITLFEKTANSGSLDAMLVLGQIY---ENELNQMTQAFKWYKKAAEAGNHDAQFRLAVM 202
Query: 321 YYN----MKDKENAIMIYDK 336
Y N K+K+ A+ Y K
Sbjct: 203 YENGEGTKKNKKQAVYWYQK 222
Score = 45.8 bits (107), Expect = 7e-04
Identities = 26/78 (33%), Positives = 40/78 (50%), Gaps = 3/78 (3%)
Query: 50 FKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGL 109
F+K N G + LG IYEN +A ++YK A +A + + F L +Y+ G
Sbjct: 151 FEKTANSGSLDAMLVLGQIYENELN---QMTQAFKWYKKAAEAGNHDAQFRLAVMYENGE 207
Query: 110 GTTQNYQEAIDAYAKACV 127
GT +N ++A+ Y K V
Sbjct: 208 GTKKNKKQAVYWYQKVSV 225
Score = 45.8 bits (107), Expect = 7e-04
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGL 101
++ KA +F +A G + L + Y G G + D + ++ ++ + + L
Sbjct: 107 DFEKAYWWFSEAAEKGSIKAINNLAVFYLQGHGVKQDIRHSITLFEKTANSGSLDAMLVL 166
Query: 102 GGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYD--RKIKGNADQAVTYYQK 158
G +Y+ L +A Y KA + ++ + L ++Y+ K N QAV +YQK
Sbjct: 167 GQIYENEL---NQMTQAFKWYKKAAEAGNHDAQFRLAVMYENGEGTKKNKKQAVYWYQK 222
Score = 42.4 bits (98), Expect = 0.008
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 11/149 (7%)
Query: 171 LGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYL 230
LG+ Y +G V Q KA ++ +A +A L + G G+ +D +
Sbjct: 94 LGILYARG-QGVPQDFEKAYWWFSEAAEKGSIKAINNLAVFYLQGH-GVKQDIRHSITLF 151
Query: 231 QKACGLNNSGGCASLGSMYMLGRYVKKDPQK---AFNFFKQACDMGSAVSCSRMGFMYSQ 287
+K NSG SL +M +LG+ + + + AF ++K+A + G+ + R+ MY
Sbjct: 152 EKTA---NSG---SLDAMLVLGQIYENELNQMTQAFKWYKKAAEAGNHDAQFRLAVMYEN 205
Query: 288 GDAVPKDLRKALDNYERGCDMGDEVGCFA 316
G+ K+ ++A+ Y++ +E+ A
Sbjct: 206 GEGTKKNKKQAVYWYQKVSVQQNELAALA 234
>ref|NP_643252.1| (NC_003919) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
gb|AAM37788.1| (AE011936) conserved hypothetical protein [Xanthomonas axonopodis
pv. citri str. 306]
Length = 252
Score = 52.0 bits (123), Expect = 1e-05
Identities = 34/116 (29%), Positives = 57/116 (48%), Gaps = 2/116 (1%)
Query: 46 ATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLY 105
A +++ A N G +E QLG +E G GT I+ A+ +Y+ A + G + L +Y
Sbjct: 58 AMLWYEVAANAGCAEAMNQLGRCHELGFGTAINAVLAVLWYRRAAEHGLAWGMYNLAHMY 117
Query: 106 DEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD--QAVTYYQKS 159
G G Q++ +A+ Y +A H +S L D+ + AD A +Y++S
Sbjct: 118 ASGRGVAQDHAQALALYHRAAEAGHAKSMNFLARYLDQGLACAADPLAACVWYRRS 173
Score = 42.4 bits (98), Expect = 0.008
Identities = 31/126 (24%), Positives = 56/126 (43%), Gaps = 4/126 (3%)
Query: 230 LQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGD 289
L KA ++ G L MY GR + DP A +++ A + G A + +++G + G
Sbjct: 26 LHKAAANHDVGAQLLLAQMYAEGRGIAADPAAAMLWYEVAANAGCAEAMNQLGRCHELGF 85
Query: 290 AVPKDLRKALDNYERGCDMGDEVGCFALAGMYYN----MKDKENAIMIYDKGCKLGMKQA 345
+ A+ Y R + G G + LA MY + +D A+ +Y + + G ++
Sbjct: 86 GTAINAVLAVLWYRRAAEHGLAWGMYNLAHMYASGRGVAQDHAQALALYHRAAEAGHAKS 145
Query: 346 CENLTK 351
L +
Sbjct: 146 MNFLAR 151
>ref|NP_435252.1| (NC_003037) hypothetical protein [Sinorhizobium meliloti]
gb|AAK64664.1| (AE007195) hypothetical protein [Sinorhizobium meliloti]
Length = 244
Score = 50.8 bits (120), Expect = 2e-05
Identities = 37/164 (22%), Positives = 74/164 (44%), Gaps = 1/164 (0%)
Query: 147 GNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
G+ A+ ++ +A+ +G + +G L V ++ A + A D R
Sbjct: 11 GDYGSALRIWEPLARAGVARAQNNIGACFAEG-LGVPENRELACKWLRLAAEAGDPVGQR 69
Query: 207 ALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFF 266
+L G AG D D+ +A +Y ++A ++ L + + G + DP +A +
Sbjct: 70 NYAALHMQGLAGTDADYGIAAEYYRRAAEKGDAPAQDMLSWLLLEGEIMTADPLEARRWA 129
Query: 267 KQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGD 310
+ A + G A S +R+G ++ V +D +KA+ + + + GD
Sbjct: 130 ECAAEAGIASSMTRLGMLHHNALGVERDAQKAVYWWLKAAERGD 173
>ref|NP_459433.1| (NC_003197) putative periplasmic protein [Salmonella typhimurium
LT2]
gb|AAL19392.1| (AE008715) putative periplasmic protein [Salmonella typhimurium
LT2]
Length = 503
Score = 50.8 bits (120), Expect = 2e-05
Identities = 66/333 (19%), Positives = 128/333 (37%), Gaps = 55/333 (16%)
Query: 1 MGVKFLKILVCG--LFFWSLNAHLW-GKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDG 57
M +KFL + + LF +NA GK D + + +K + K S
Sbjct: 1 MEIKFLSLCILAGVLFVSQVNASANNGKDDVKYAALTQKDLDALPVEKRASVLD------ 54
Query: 58 VSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQE 117
+LG I+E G ++ ++AL+YYK AC+ GC+ + Y G G ++ +
Sbjct: 55 ------ELGFIHEYGLSVPMNRERALQYYKQACELGGNYGCYNVKYAYQYGDGVAKDSAQ 108
Query: 118 AIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEK 177
A + YAK L + ++ +++ Q + + + D ++ + +
Sbjct: 109 A-NKYAKKMNLDN--------LLIEQEYIDKFSQEIYMAKALADTDKSQRAAFISI---- 155
Query: 178 GFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLN 237
+ + ++ + + + R ++GD + DY LN
Sbjct: 156 -LIHALNNRPESDALFFSRIGFNQEKTFRLATLWSQDGDPQM--------DYQMGRLTLN 206
Query: 238 NSGGCASLGSMYMLGRYVKKDPQ---KAFNFFKQACDMGSAVSCSRMGFMYSQGD----A 290
+ GRY + Q + +F+ A + G + S +G +YS G+
Sbjct: 207 D-----------FSGRYADEPYQARPASLKWFRAAAEKGVVEAQSLLGGIYSGGEGDEWG 255
Query: 291 VPKDLRKALDNYERGCDMGDEVGCFALAGMYYN 323
+ D+++A Y + GD AL +YY+
Sbjct: 256 IKPDIQEAQKWYGQAAKQGDSDAQIALGKIYYS 288
>gb|AAK54860.1| (AF304855) SEL1L [Rattus norvegicus]
Length = 151
Score = 50.1 bits (118), Expect = 4e-05
Identities = 34/128 (26%), Positives = 59/128 (45%), Gaps = 1/128 (0%)
Query: 195 KACRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRY 254
K ++ + +A G NG ++ E A+ YLQKA G+N++ + + G Y
Sbjct: 5 KRRQMQEAEAIYQSGMKILNGSTRKNQKRE-AYRYLQKAAGMNHTKALERVSYALLFGDY 63
Query: 255 VKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGC 314
+ ++ Q A F++ + GS + +GF+Y+ G V KAL Y G G+ +
Sbjct: 64 LTQNIQAAKEMFEKLTEEGSPKGQTGLGFLYASGLGVNSSQAKALVYYTFGALGGNLIAH 123
Query: 315 FALAGMYY 322
L Y+
Sbjct: 124 MVLGYRYW 131
Score = 43.9 bits (102), Expect = 0.003
Identities = 26/85 (30%), Positives = 37/85 (42%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREG 97
Y + N A F+K +G +G T LG +Y +G G KAL YY +
Sbjct: 63 YLTQNIQAAKEMFEKLTEEGSPKGQTGLGFLYASGLGVNSSQAKALVYYTFGALGGNLIA 122
Query: 98 CFGLGGLYDEGLGTTQNYQEAIDAY 122
LG Y G+G Q+ + A+ Y
Sbjct: 123 HMVLGYRYWAGIGVLQSCESALTHY 147
>ref|NP_249051.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||F83599 hypothetical protein PA0360 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG03749.1|AE004474_1 (AE004474) hypothetical protein [Pseudomonas aeruginosa]
Length = 328
Score = 49.7 bits (117), Expect = 5e-05
Identities = 45/186 (24%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREG 97
Y+ NY+ A ++ KA G+ QL ++Y +G G D +A +++ A + D
Sbjct: 72 YQQQNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQDKTEAARWFRKAAEQGDAAA 131
Query: 98 CFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQ 157
+G LY G G Q+ +A + +A ++ NLG Y
Sbjct: 132 QNEMGVLYWRGEGVDQDRVKAGTWFERAAASGSEDAETNLGWFY---------------- 175
Query: 158 KSCNFDMAKGCYVLGVAYEKGFLE-VKQSNHKAVIYYLKACRLDDGQACRALGSLFENGD 216
D ++G Y E L+ S KA ++ KA D +A +G + NG
Sbjct: 176 ----LDDSQGVYSATSDEEAALLDRYAGSREKAFQWFCKAATQGDARAQFKVGEAYWNGS 231
Query: 217 -AGLDE 221
AG+++
Sbjct: 232 GAGMNK 237
Score = 42.7 bits (99), Expect = 0.006
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 8/120 (6%)
Query: 221 EDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSR 280
+++ A ++ KA L +Y G +D +A +F++A + G A + +
Sbjct: 75 QNYASAREWWGKAAAAGMVRAQIQLAMLYRDGDGGPQDKTEAARWFRKAAEQGDAAAQNE 134
Query: 281 MGFMYSQGDAVPKDLRKALDNYERGCDMGDE-----VGCFAL---AGMYYNMKDKENAIM 332
MG +Y +G+ V +D KA +ER G E +G F L G+Y D+E A++
Sbjct: 135 MGVLYWRGEGVDQDRVKAGTWFERAAASGSEDAETNLGWFYLDDSQGVYSATSDEEAALL 194
>ref|NP_350039.1| (NC_003030) TPR-repeat-containing protein [Clostridium
acetobutylicum]
gb|AAK81379.1|AE007842_7 (AE007842) TPR-repeat-containing protein [Clostridium
acetobutylicum]
Length = 305
Score = 49.3 bits (116), Expect = 7e-05
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 19/146 (13%)
Query: 26 QDNSFLGVAEKAYKSGNYSKATSYFKKA---CNDGVSEGCTQLGIIYEN-GQGTRIDYKK 81
Q + +L AE+A+ K+ Y+ K N + L +IY++ G+ +K
Sbjct: 6 QIDKYLKKAEEAFLDNKLVKSLDYYNKVYELTNGEDVDTIINLALIYDSLGK-----VEK 60
Query: 82 ALEYYKTACQADDRE--GCFGLGGLYDEGLGTTQNYQEAIDAYAKACVL--KHPESCYNL 137
A EYYK A DD E +GL +YDE ++Y+EAI Y KA + + ++ + L
Sbjct: 61 AEEYYKEALSIDDYEERAYYGLATIYDE----KEDYEEAIKLYNKAIYINPNYHKAYFFL 116
Query: 138 GIIYDRKIKGNADQAVTYYQKSCNFD 163
YD + G + A+ Y+K + D
Sbjct: 117 ANAYD--LSGQKNLAIETYEKLLSLD 140
>ref|NP_386885.1| (NC_003047) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
emb|CAC47358.1| (AL591791) HYPOTHETICAL PROTEIN [Sinorhizobium meliloti]
Length = 381
Score = 48.5 bits (114), Expect = 1e-04
Identities = 58/248 (23%), Positives = 97/248 (38%), Gaps = 10/248 (4%)
Query: 26 QDNSFLGVAEKAY---KSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKA 82
++ F G ++AY + G Y A G T + I E G G D K A
Sbjct: 99 EEKPFTGKIDEAYGAFQRGYYLTAMDLALPRAQLGDPAAQTLVAAILEQGLGVARDAKAA 158
Query: 83 LEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLG--II 140
+Y A D F + EG ++ + A + KA L + + +N G ++
Sbjct: 159 AFWYGQAANNGDPAAMFKYALILMEGRYVKRDRERADELMKKAADLGNASAQFNYGQTLV 218
Query: 141 YDRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAY--EKGFLEVKQSNHKAVIYYLKACR 198
D + A+ YY+KS +A Y L Y G E K++ +A + L+A R
Sbjct: 219 ADMPGERGLKAAMPYYEKSAEQGIADAQYALSQIYLNVDGIEESKRA--RAREWLLRAAR 276
Query: 199 LDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKD 258
A + G AG D + E F ++++A N L +Y+ + +
Sbjct: 277 AGYDTAQLDIAIWLIEGIAG-DRNLEEGFAWMKRAAESGNVVAQNRLSHLYVNAIGTRPN 335
Query: 259 PQKAFNFF 266
P +A ++
Sbjct: 336 PVEAAKWY 343
Score = 47.8 bits (112), Expect = 2e-04
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 8/146 (5%)
Query: 192 YYLKA-------CRLDDGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCAS 244
YYL A +L D A + ++ E G G+ D + A + +A +
Sbjct: 118 YYLTAMDLALPRAQLGDPAAQTLVAAILEQG-LGVARDAKAAAFWYGQAANNGDPAAMFK 176
Query: 245 LGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYER 304
+ M GRYVK+D ++A K+A D+G+A + G + L+ A+ YE+
Sbjct: 177 YALILMEGRYVKRDRERADELMKKAADLGNASAQFNYGQTLVADMPGERGLKAAMPYYEK 236
Query: 305 GCDMGDEVGCFALAGMYYNMKDKENA 330
+ G +AL+ +Y N+ E +
Sbjct: 237 SAEQGIADAQYALSQIYLNVDGIEES 262
>ref|NP_106249.1| (NC_002678) unknown protein [Mesorhizobium loti]
dbj|BAB52035.1| (AP003007) unknown protein [Mesorhizobium loti]
Length = 1360
Score = 48.1 bits (113), Expect = 1e-04
Identities = 31/124 (25%), Positives = 61/124 (49%), Gaps = 4/124 (3%)
Query: 230 LQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGD 289
L+ A ++ +GS Y R VK+D A +++++ ++G A + R+G Y +G
Sbjct: 1088 LRDAAAGGDAKALFEIGSRYAESRGVKEDMAAAAKWYEKSAELGFAPAEYRIGNFYEKGI 1147
Query: 290 AVPKDLRKALDNYERGCDMGDEVGCFALAGMYY----NMKDKENAIMIYDKGCKLGMKQA 345
V +D++K+ Y+ + G+ LA ++ + D E+A + + LG+K +
Sbjct: 1148 GVARDIKKSKTWYQLAAEQGNASAMHNLAVLFAMAADGVTDNESAAHWFQEAADLGVKDS 1207
Query: 346 CENL 349
NL
Sbjct: 1208 QFNL 1211
Score = 45.1 bits (105), Expect = 0.001
Identities = 28/156 (17%), Positives = 72/156 (45%), Gaps = 3/156 (1%)
Query: 51 KKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLG 110
+ A G ++ ++G Y +G + D A ++Y+ + + + +G Y++G+G
Sbjct: 1089 RDAAAGGDAKALFEIGSRYAESRGVKEDMAAAAKWYEKSAELGFAPAEYRIGNFYEKGIG 1148
Query: 111 TTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNAD--QAVTYYQKSCNFDMAKGC 168
++ +++ Y A + + +NL +++ G D A ++Q++ + +
Sbjct: 1149 VARDIKKSKTWYQLAAEQGNASAMHNLAVLFAMAADGVTDNESAAHWFQEAADLGVKDSQ 1208
Query: 169 YVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQA 204
+ LG+ KG + +KQ+ ++ ++ + D A
Sbjct: 1209 FNLGILAAKG-VGMKQNLEESYKWFALVAKTGDKDA 1243
>ref|NP_521481.1| (NC_003295) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
emb|CAD17150.1| (AL646074) CONSERVED HYPOTHETICAL PROTEIN [Ralstonia solanacearum]
Length = 276
Score = 47.4 bits (111), Expect = 3e-04
Identities = 35/123 (28%), Positives = 51/123 (41%)
Query: 201 DGQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQ 260
D +A ALG G G+ D+ A L++A ++ LG MY G +
Sbjct: 124 DARAQLALGKALLLGTGGVARDYPRALHLLRQAADRGDAAAAYYLGLMYRSGYGTAANTA 183
Query: 261 KAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGM 320
A ++F A G + + Y GD VP+D +AL YE+ + ALA
Sbjct: 184 LAAHWFDGAARHGIPAAMFMLANAYRDGDGVPRDEARALALYEQAAEHELPEAVQALAMA 243
Query: 321 YYN 323
Y N
Sbjct: 244 YQN 246
>ref|NP_253206.1| (NC_002516) hypothetical protein [Pseudomonas aeruginosa]
pir||F83081 hypothetical protein PA4516 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG07904.1|AE004865_5 (AE004865) hypothetical protein [Pseudomonas aeruginosa]
Length = 271
Score = 47.4 bits (111), Expect = 3e-04
Identities = 25/77 (32%), Positives = 43/77 (55%)
Query: 244 SLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYE 303
+L +++ GR V +D +A+ ++QA + G A S + +G + +G V +DL +A Y
Sbjct: 117 NLANLHATGRGVPQDQPRAYALYRQAAEQGHAKSMNLVGRYHEEGLVVARDLAQAAHWYR 176
Query: 304 RGCDMGDEVGCFALAGM 320
R + GD G F+ A M
Sbjct: 177 RSAEGGDFRGQFSHAAM 193
>gb|AAH26655.1| (BC026655) Similar to KIAA0746 protein [Mus musculus]
Length = 426
Score = 47.4 bits (111), Expect = 3e-04
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 21/267 (7%)
Query: 67 IIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKAC 126
I+ GQG + + + ALE K A + GLG Y + +NY +A + KA
Sbjct: 29 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHK---FRKNYAKAAKYWLKAE 85
Query: 127 VLKHPESCYNLGIIY-DRKIKG----NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLE 181
+ +P++ YNLG++Y D G N A Y+ K+ +G + Y G LE
Sbjct: 86 EMGNPDASYNLGVLYLDGIFPGVPGRNLTLAGEYFHKAAQGGHIEGTLWCSLYYITGNLE 145
Query: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENG-DAGLDEDFEVAFDYLQKACGLNNSG 240
+ + + + K +G LG + G +A L+ + A Y A
Sbjct: 146 TFPRDPEKAVVWAKHVAEKNGY----LGHVIRKGLNAYLEGLWHEALLYYVLAAETGIEV 201
Query: 241 GCASLGSMY-----MLGRYVKKD-PQKAFNFFKQACDMGSAVSCSRMGFMYSQG-DAVPK 293
+L + + GRY+ + + +NF D S + +MG +Y G +
Sbjct: 202 SQTNLAHICEERPDLAGRYLGVNCVWRYYNFSVFQIDAPS-FAYLKMGDLYYYGHQNQSQ 260
Query: 294 DLRKALDNYERGCDMGDEVGCFALAGM 320
DL ++ Y + GD G F LA +
Sbjct: 261 DLELSVQMYAQAALDGDSQGFFNLAAL 287
>ref|NP_595669.1| (NC_003423) hypothetical protein [Schizosaccharomyces pombe]
pir||T40051 hypothetical protein SPBC28F2.08c - fission yeast
(Schizosaccharomyces pombe)
emb|CAB57937.1| (AL121795) hypothetical protein [Schizosaccharomyces pombe]
Length = 713
Score = 47.0 bits (110), Expect = 3e-04
Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 225 VAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMG-SAVSCSRMGF 283
+A +Y +A N+ +G Y +G P+ AF+++ QA + SA++ R+G+
Sbjct: 476 IAMNYYSRAAARNHIHSLIKIGDFYRMGLGTSAKPELAFSYYSQAAAIHPSALAYWRLGW 535
Query: 284 MYSQGDAVPKDLRKALDNYE 303
M+ G VP D A NY+
Sbjct: 536 MHEYGVGVPVDFEMAKKNYD 555
>ref|NP_541444.1| (NC_003318) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
gb|AAL53708.1| (AE009683) TETRATRICOPEPTIDE REPEAT FAMILY PROTEIN [Brucella
melitensis]
Length = 317
Score = 47.0 bits (110), Expect = 3e-04
Identities = 29/130 (22%), Positives = 58/130 (44%), Gaps = 2/130 (1%)
Query: 51 KKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLG 110
++A G ++G Y G+G + K+A ++Y+ A + +G ++GLG
Sbjct: 45 REAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIGSFNEKGLG 104
Query: 111 TTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQ--AVTYYQKSCNFDMAKGC 168
+N ++A Y A + + +NL +++ G D AV ++ ++ +
Sbjct: 105 MARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQ 164
Query: 169 YVLGVAYEKG 178
Y LG+ KG
Sbjct: 165 YNLGILAAKG 174
Score = 45.4 bits (106), Expect = 0.001
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 4/124 (3%)
Query: 230 LQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGD 289
L++A + +G+ YM GR V ++ ++A +++ A D G A + R+G +G
Sbjct: 44 LREAAAKGDIRALFEIGNRYMEGRGVAENVKEAAKWYQLAADQGFAPAQYRIGSFNEKGL 103
Query: 290 AVPKDLRKALDNYERGCDMGDEVGCFALAGMY----YNMKDKENAIMIYDKGCKLGMKQA 345
+ ++L KA Y+ D G+ LA ++ D A+ + + +LG+K +
Sbjct: 104 GMARNLEKAKSWYQLAADQGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDS 163
Query: 346 CENL 349
NL
Sbjct: 164 QYNL 167
Score = 43.1 bits (100), Expect = 0.005
Identities = 29/109 (26%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 32 GVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQ 91
GVAE N +A +++ A + G + ++G E G G + +KA +Y+ A
Sbjct: 68 GVAE------NVKEAAKWYQLAADQGFAPAQYRIGSFNEKGLGMARNLEKAKSWYQLAAD 121
Query: 92 ADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII 140
+ L L+ G T + A+ + +A L +S YNLGI+
Sbjct: 122 QGNASAMHNLAVLFATGTNGTPDNAAAVRWFTEAAELGVKDSQYNLGIL 170
>ref|NP_662672.1| (NC_002932) conserved hypothetical protein [Chlorobium tepidum TLS]
gb|AAM73014.1| (AE012932) conserved hypothetical protein [Chlorobium tepidum TLS]
Length = 92
Score = 45.4 bits (106), Expect = 0.001
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 254 YVKKDPQKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVG 313
Y + QK F+ K+A + G A + +G MY G V +D R A + Y + CD G++ G
Sbjct: 21 YCQPPSQKEFSELKKAAEQGDAQAQCMLGLMYELGLGVRQDKRTAKEWYGKACDNGNQKG 80
Query: 314 C 314
C
Sbjct: 81 C 81
Score = 43.1 bits (100), Expect = 0.005
Identities = 21/54 (38%), Positives = 30/54 (54%)
Query: 45 KATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGC 98
K S KKA G ++ LG++YE G G R D + A E+Y AC +++GC
Sbjct: 28 KEFSELKKAAEQGDAQAQCMLGLMYELGLGVRQDKRTAKEWYGKACDNGNQKGC 81
>ref|NP_602587.1| (NC_003454) Tetratricopeptide repeat family protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gb|AAL93886.1| (AE010481) Tetratricopeptide repeat family protein [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
Length = 628
Score = 45.1 bits (105), Expect = 0.001
Identities = 79/327 (24%), Positives = 126/327 (38%), Gaps = 65/327 (19%)
Query: 42 NYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCF-- 99
N + A+ Y+ +AC+ S Y KA+E Y A + + + C+
Sbjct: 57 NLNNASYYYNRACSYYCSN-----------------KYDKAIEDYDKAIKLNPNDACYFN 99
Query: 100 GLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKS 159
G Y Y EAI+ Y KA L + Y + D+A+ Y K+
Sbjct: 100 NRGHSY----FALNKYSEAIEDYDKAIKLDPNNASYYYKRGFSYYALNKYDKAIEDYNKA 155
Query: 160 CNFDMAKGCYVLG----VAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGSLFENG 215
D Y YEK + +K++ Y KA +LD A F
Sbjct: 156 IKLDPNNAAYFSSRGDIYYYEKAY-------NKSIEDYNKAIKLDPNNA-------FYYD 201
Query: 216 DAGLD----EDFEVAFDYLQKACGL--NNSGGCASLGSMY-MLGRYVKKDPQKAFNFFKQ 268
+ GL + ++ A + KA L NN+ C + G Y L +Y ++A N + +
Sbjct: 202 NRGLAYEKLKKYKEAINDYNKAIKLNPNNAFYCYNRGFTYNKLKKY-----KEAINDYDK 256
Query: 269 A--CDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAG---MYYN 323
A D +A + G Y+ + KAL++Y++ + FA + N
Sbjct: 257 AIKLDPNNASYFNNRGVAYNN----LGEYSKALEDYDKAIKLNPNY-TFAYNNKGITFDN 311
Query: 324 MKDKENAIMIYDKGCKL--GMKQACEN 348
+ + E AIM Y+K +L K A EN
Sbjct: 312 LGEFEEAIMNYNKAIELDPSYKSAIEN 338
>ref|NP_472966.1| (NC_000910) predicted membrane associated protein [Plasmodium
falciparum]
pir||B71621 probable membrane associated protein PFB0190c - malaria parasite
(Plasmodium falciparum)
gb|AAC71827.1| (AE001379) predicted membrane associated protein [Plasmodium
falciparum 3D7]
Length = 2295
Score = 45.1 bits (105), Expect = 0.001
Identities = 33/109 (30%), Positives = 50/109 (45%), Gaps = 10/109 (9%)
Query: 227 FDYLQKACGLNNSGGCASLGSMYMLGRY---VKKDPQKAFNFFKQACDMGSAVSCSRMGF 283
F+Y K NS A+LG +Y LG +++D KAF F+K+A D G S G+
Sbjct: 1079 FEYFVKLADNRNSYALAALGEIYYLGNESIGIERDEIKAFEFWKKAADQGDTTSALSTGY 1138
Query: 284 MYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDKENAIM 332
Y D K L+K + + D D + + + KDK+N +
Sbjct: 1139 AYL--DEYKKFLKK--EELVKNMDRED---ILTMIHLENSTKDKKNVTL 1180
>gb|EAA03532.1| (AAAB01008794) agCP14246 [Anopheles gambiae str. PEST]
Length = 443
Score = 44.7 bits (104), Expect = 0.002
Identities = 24/101 (23%), Positives = 42/101 (40%), Gaps = 3/101 (2%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNL 137
+Y A+ + K F LG Y++G G ++ A++ Y A HP++ YN+
Sbjct: 301 EYASAVSHLKLGTSHQHAGAAFNLGICYEQGYGIPKDMAMALECYQLAAKQGHPQAIYNV 360
Query: 138 GIIYDRKIKG---NADQAVTYYQKSCNFDMAKGCYVLGVAY 175
G+ + R G + A Y+ + + LG Y
Sbjct: 361 GVFHARGFAGLRPSRSMAKKYFLAAAELGLQDAIVALGPKY 401
>ref|NP_473246.1| (NC_000521) predicted using hexExon; MAL3P4.5 (PFC0550w),
Hypothetical protein, len: 808 aa [Plasmodium
falciparum]
pir||T18454 hypothetical protein C0550w - malaria parasite (Plasmodium
falciparum)
emb|CAA15596.1| (AL008970) hypothetical protein, PFC0550w [Plasmodium falciparum
3D7]
Length = 807
Score = 44.7 bits (104), Expect = 0.002
Identities = 22/85 (25%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 247 SMYMLGRYVKKDP--QKAFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYER 304
+MY LG+ K++ ++AF + +A + ++ +G +Y G V KD+ K+++N+ +
Sbjct: 453 AMYDLGKKYKEEKNFKQAFKYINEASKKNNLLALKELGIIYLYGYGVQKDINKSIENFSK 512
Query: 305 GCDMGDEVGCFALAGMYYNMKDKEN 329
+ GD L +YY + +N
Sbjct: 513 AAEAGDVESKCYLGYIYYFIDGYKN 537
Score = 42.4 bits (98), Expect = 0.008
Identities = 21/66 (31%), Positives = 36/66 (53%)
Query: 220 DEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQACDMGSAVSCS 279
+++F+ AF Y+ +A NN LG +Y+ G V+KD K+ F +A + G S
Sbjct: 464 EKNFKQAFKYINEASKKNNLLALKELGIIYLYGYGVQKDINKSIENFSKAAEAGDVESKC 523
Query: 280 RMGFMY 285
+G++Y
Sbjct: 524 YLGYIY 529
>ref|XP_132104.1| (XM_132104) similar to Sel-1 homolog precursor (Suppressor of
lin-12-like protein) (Sel-1L) [Mus musculus]
Length = 253
Score = 44.7 bits (104), Expect = 0.002
Identities = 38/132 (28%), Positives = 60/132 (44%), Gaps = 9/132 (6%)
Query: 67 IIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKAC 126
I+ GQG + + + ALE K A + GLG Y + +NY +A + KA
Sbjct: 38 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHK---FRKNYAKAAKYWLKAE 94
Query: 127 VLKHPESCYNLGIIY-DRKIKG----NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLE 181
+ +P++ YNLG++Y D G N A Y+ K+ +G + Y G LE
Sbjct: 95 EMGNPDASYNLGVLYLDGIFPGVPGRNLTLAGEYFHKAAQGGHIEGTLWCSLYYITGNLE 154
Query: 182 V-KQSNHKAVIY 192
+ KAV++
Sbjct: 155 TFPRDPEKAVVW 166
>ref|NP_223186.1| (NC_000921) putative [Helicobacter pylori J99]
pir||A71927 hypothetical protein jhp0468 - Helicobacter pylori (strain J99)
gb|AAD06051.1| (AE001481) putative [Helicobacter pylori J99]
Length = 283
Score = 44.7 bits (104), Expect = 0.002
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDR-- 95
+ G Y +A FK A + G L +Y G+G ++DYKKA Y + A +
Sbjct: 68 FNQGQYKQAFKDFKLAQEYSIGLGNVYLAKMYLEGKGVKVDYKKAQFYAQNAIKGYGSGL 127
Query: 96 -EGCFGLGGLYDEGLGTTQNYQEAIDAY 122
G LG + EGLG ++ ++A+ Y
Sbjct: 128 LGGALILGRMQAEGLGMKKDLKQALKTY 155
>ref|NP_531202.1| (NC_003304) conserved hypothetical protein [Agrobacterium tumefaciens
str. C58 (U. Washington)]
gb|AAL41518.1| (AE009019) conserved hypothetical protein [Agrobacterium tumefaciens
str. C58 (U. Washington)]
Length = 1248
Score = 44.3 bits (103), Expect = 0.002
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 3/157 (1%)
Query: 52 KACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGT 111
+A G ++ ++ Y +G+G D +A ++YK A + L LY++ G
Sbjct: 977 EAAAKGDTQALFEIAARYTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGV 1036
Query: 112 TQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVT--YYQKSCNFDMAKGCY 169
+N EA Y A + + +NL ++ G D A + ++ K+ + +
Sbjct: 1037 ERNLVEAKRYYTLAAEQGNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVRDSQF 1096
Query: 170 VLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
L + Y +G VKQ ++ ++ A + D A +
Sbjct: 1097 NLAILYARG-SGVKQDIEESYKWFAIAAKDGDADAAQ 1132
>ref|NP_207316.1| (NC_000915) conserved hypothetical protein [Helicobacter pylori
26695]
pir||G64584 conserved hypothetical protein HP0519 - Helicobacter pylori
(strain 26695)
gb|AAD07587.1| (AE000566) conserved hypothetical protein [Helicobacter pylori
26695]
Length = 276
Score = 44.3 bits (103), Expect = 0.002
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDR-- 95
+ G Y +A F+ A + G L +Y G+G ++DYKKA Y + A +
Sbjct: 60 FNQGQYQQAFKDFRLAQEYSIGLGSVYLAKMYLEGKGVKVDYKKAQFYAENAIKGYGSGL 119
Query: 96 -EGCFGLGGLYDEGLGTTQNYQEAIDAY 122
G LG + EGLG ++ ++A+ Y
Sbjct: 120 LGGALILGRMQAEGLGMKKDLKQALKTY 147
>gb|AAK18804.1|AF305612_1 (AF305612) LMP1 [Borrelia burgdorferi]
Length = 1013
Score = 44.3 bits (103), Expect = 0.002
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 28 NSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYK 87
++++ +A+ KSGN ++A S +K N LGI+Y+N + +Y+KA+E ++
Sbjct: 874 SAYINLAKAYEKSGNKTQAISTLEKIINKNNKLALNNLGILYKNQK----NYQKAIEIFE 929
Query: 88 TACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGII 140
A D E + L E + ++ + Y K +PE+ Y LGII
Sbjct: 930 KAIINSDIEAKYNLATTLIE-INDNTRAKDLLKEYTK-LKPNNPEALYALGII 980
>ref|NP_353527.1| (NC_003062) AGR_C_883p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK86312.1| (AE007985) AGR_C_883p [Agrobacterium tumefaciens str. C58 (Cereon)]
Length = 1214
Score = 44.3 bits (103), Expect = 0.002
Identities = 34/157 (21%), Positives = 67/157 (42%), Gaps = 3/157 (1%)
Query: 52 KACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGT 111
+A G ++ ++ Y +G+G D +A ++YK A + L LY++ G
Sbjct: 943 EAAAKGDTQALFEIAARYTDGRGVTADRAEAAKWYKMAADRGLAPAQYRLANLYEKANGV 1002
Query: 112 TQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVT--YYQKSCNFDMAKGCY 169
+N EA Y A + + +NL ++ G D A + ++ K+ + +
Sbjct: 1003 ERNLVEAKRYYTLAAEQGNAGAMHNLAVLLASDAAGQPDFATSAQWFIKASELGVRDSQF 1062
Query: 170 VLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACR 206
L + Y +G VKQ ++ ++ A + D A +
Sbjct: 1063 NLAILYARG-SGVKQDIEESYKWFAIAAKDGDADAAQ 1098
>ref|NP_485860.1| (NC_003272) hypothetical protein [Nostoc sp. PCC 7120]
dbj|BAB73519.1| (AP003587) ORF_ID:all1820~hypothetical protein [Nostoc sp. PCC
7120]
Length = 1009
Score = 44.3 bits (103), Expect = 0.002
Identities = 85/376 (22%), Positives = 149/376 (39%), Gaps = 85/376 (22%)
Query: 28 NSFLGVAEKAYKSGNYSKATSYF------KKACNDGVSE--GCTQLGIIYEN-GQGTRID 78
NS + + ++ Y KA YF ++ D +E + +G +Y N GQ
Sbjct: 80 NSLVNIGYVYFRKAEYGKALEYFQSSLDIRRKIKDRQNEWIPLSYIGEVYVNLGQ----- 134
Query: 79 YKKALEYYKTAC-------QADDREGCFG---------LGGLYDEGLGTTQNYQEAIDAY 122
Y KALEYY+ A A+ ++ + +G +Y Y +A+D Y
Sbjct: 135 YPKALEYYQPALAIIKELKAANSKDSSYATSEKTLLADIGAVYFR----MGQYTKALDFY 190
Query: 123 AKACVLKHP--------ESCYNLGIIYDRKIKGNADQAVTYYQK---------------- 158
+ ++ ++ N+G++Y GN QA+ YQ+
Sbjct: 191 QQTLAMQKADDDKIGGIQTLNNIGVVYVN--LGNYKQALDAYQQGLADLQECCSNYTGTK 248
Query: 159 --------SCNFDMAKGCYVLGVAYEKG--FLEVKQSNHKAVIYYLKACRLDDGQACRAL 208
S NF + + L +A E + ++ KA +K GQ +AL
Sbjct: 249 AAIINNLASTNFSLGQYKKSLELAEESANIYSKINHDAEKATKQEIKLLYDYLGQNSQAL 308
Query: 209 GSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYM-LGRY--VKKDPQKAFNF 265
+ + G D + +F + +A LNN +G +Y+ LG+Y K Q+A N
Sbjct: 309 QQVASRANVG-DGFGKDSFQFQGRALNLNN------IGQIYLSLGKYDQALKLYQQALNI 361
Query: 266 FKQ-ACDMGSAVSCSRMGFMYSQGDAVPKDL---RKALDNY-ERGCDMGDEVGCFALAGM 320
+K+ + G AV+ + + + S P+ L ++AL Y E G G+ V L +
Sbjct: 362 YKENSYKPGIAVTLNNIAKVQSNSGKYPQALELNQQALTIYQEIGDRTGEGVTMSNLGQI 421
Query: 321 YYNMKDKENAIMIYDK 336
+ +E A +Y +
Sbjct: 422 HQKQGQQEKASGLYQQ 437
>ref|NP_356872.1| (NC_003063) AGR_L_2168p [Agrobacterium tumefaciens] [Agrobacterium
tumefaciens str. C58 (Cereon)]
gb|AAK89657.1| (AE008308) AGR_L_2168p [Agrobacterium tumefaciens str. C58
(Cereon)]
Length = 370
Score = 43.9 bits (102), Expect = 0.003
Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 26/185 (14%)
Query: 142 DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD 201
+++ KG D+A ++Q+ E Q+ KA L + D
Sbjct: 89 EKEFKGRVDEAYGHFQRG---------------------EYVQALDKA----LTRAQNGD 123
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
A + + G G+ D + A + Q+A + + M G++V +D K
Sbjct: 124 ASAQTLVAEMMSRG-LGIARDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVTRDKAK 182
Query: 262 AFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
A +F ++A + G+A + G + + K L AL YE+ + G +A++ +Y
Sbjct: 183 ADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAVSQIY 242
Query: 322 YNMKD 326
+++KD
Sbjct: 243 WSVKD 247
>ref|NP_455031.1| (NC_003198) probable secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
emb|CAD08893.1| (AL627266) probable secreted protein [Salmonella enterica subsp.
enterica serovar Typhi]
Length = 223
Score = 43.9 bits (102), Expect = 0.003
Identities = 34/127 (26%), Positives = 57/127 (44%), Gaps = 16/127 (12%)
Query: 1 MGVKFLKILVCG--LFFWSLNA-HLWGKQDNSFLGVAEKAYKSGNYSKATSYFKKACNDG 57
M +KFL + + LF +NA K D + + +K + + K S
Sbjct: 1 MKIKFLSLCILAGVLFANQVNASENNSKDDVKYAALTQKDFDALPVEKRASVLD------ 54
Query: 58 VSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQE 117
+LG I+E G ++ ++AL+YYK AC+ GC+ + Y G G ++ +
Sbjct: 55 ------ELGFIHEYGLNVPMNREQALQYYKQACELGGNYGCYNVKYAYQHGDGVAKDSAQ 108
Query: 118 AIDAYAK 124
A + YAK
Sbjct: 109 A-NKYAK 114
>ref|NP_534243.1| (NC_003305) enhanced entry protein [Agrobacterium tumefaciens str.
C58 (U. Washington)]
gb|AAL44559.1| (AE009306) enhanced entry protein [Agrobacterium tumefaciens str.
C58 (U. Washington)]
Length = 328
Score = 43.9 bits (102), Expect = 0.003
Identities = 40/185 (21%), Positives = 77/185 (41%), Gaps = 26/185 (14%)
Query: 142 DRKIKGNADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD 201
+++ KG D+A ++Q+ E Q+ KA L + D
Sbjct: 47 EKEFKGRVDEAYGHFQRG---------------------EYVQALDKA----LTRAQNGD 81
Query: 202 GQACRALGSLFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQK 261
A + + G G+ D + A + Q+A + + M G++V +D K
Sbjct: 82 ASAQTLVAEMMSRG-LGIARDEKTAAFWYQQAAEGGDPVAMFKFALILMEGKFVTRDKAK 140
Query: 262 AFNFFKQACDMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMY 321
A +F ++A + G+A + G + + K L AL YE+ + G +A++ +Y
Sbjct: 141 ADDFMRRAAEAGNASAQFNWGQILVSENPGAKGLLMALPFYEKSAEQGIADAQYAVSQIY 200
Query: 322 YNMKD 326
+++KD
Sbjct: 201 WSVKD 205
>gb|EAA08334.1| (AAAB01008879) agCP2877 [Anopheles gambiae str. PEST]
Length = 443
Score = 43.9 bits (102), Expect = 0.003
Identities = 24/101 (23%), Positives = 41/101 (39%), Gaps = 3/101 (2%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNL 137
+Y A+ + K F LG Y++G G ++ A + Y A HP++ YN+
Sbjct: 301 EYASAVSHLKLGTSHQHAGAAFNLGICYEQGYGIPKDMAMAFECYQLAAKQGHPQAIYNV 360
Query: 138 GIIYDRKIKG---NADQAVTYYQKSCNFDMAKGCYVLGVAY 175
G+ + R G + A Y+ + + LG Y
Sbjct: 361 GVFHARGFAGLRPSRSMAKKYFLAAAELGLQDAIVALGPKY 401
>ref|NP_629352.1| (NC_003888) hypothetical protein SC7E4.02 [Streptomyces coelicolor
A3(2)]
emb|CAB94590.1| (AL359214) hypothetical protein SC7E4.02 [Streptomyces coelicolor
A3(2)]
Length = 607
Score = 43.5 bits (101), Expect = 0.004
Identities = 68/322 (21%), Positives = 124/322 (38%), Gaps = 39/322 (12%)
Query: 40 SGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCF 99
+G+ A ++ +A DG LG ++ R + + A +Y+ A A D G +
Sbjct: 268 AGDTESAAVWWLRAAQDGDGNAANALGALHAE----RGETQTAERWYRAAMDAGDDNGAY 323
Query: 100 GLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKIKGNADQAVTYYQKS 159
LG L E TTQ A Y +A H E+ L I+ R G+ A ++ K+
Sbjct: 324 NLGLLCAEQGRTTQ----AEQWYRRAAYAGHREASNALAILLLR--AGDESGAEPWFSKA 377
Query: 160 CNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVI-YYLKACRLDDGQACRALGSLFENGDAG 218
+ LG+ L +S +A + +Y +A +A +G G
Sbjct: 378 AEAGSVDAAFNLGI------LHAGRSEERAALRWYERAAAAGHTEAALQVGMARLRGG-- 429
Query: 219 LDEDFEVAFDYLQKACGLNNSGGCASLGSM----------YMLGRYVKKDPQKAFNFFKQ 268
D + A +L+ A G ++ L ++ + LG +D + ++++
Sbjct: 430 ---DEQEAERFLRCAAGGGSAEAAYRLATVLDARRPPEPAHELGE-PAQDKSECEEWYER 485
Query: 269 ACDMGSAVSCSRMGFM-YSQGDAVPKDLRKALDNYERGCDMGDEVGCFALAGMYYNMKDK 327
A G + R+G + ++GD V +A Y + G G F L + +
Sbjct: 486 AASQGHRRAQVRVGMLAAARGDVV-----EAARWYREAAEAGSRNGAFNLGLLLAREGSE 540
Query: 328 ENAIMIYDKGCKLGMKQACENL 349
A++ + + G +A L
Sbjct: 541 PEAVVWWRRAADAGHGRAALRL 562
>ref|NP_638122.1| (NC_003902) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
gb|AAM42046.1| (AE012390) conserved hypothetical protein [Xanthomonas campestris
pv. campestris str. ATCC 33913]
Length = 252
Score = 43.1 bits (100), Expect = 0.005
Identities = 41/165 (24%), Positives = 69/165 (40%), Gaps = 5/165 (3%)
Query: 44 SKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGG 103
++A + +KA + L +Y G+G D +A+ +Y+ A A E LG
Sbjct: 20 AQAVALLRKAADRQDVAAQLLLAQLYAEGRGVAADPIQAMLWYEVAANAGHPEAMNQLGR 79
Query: 104 LYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIY--DRKIKGNADQAVTYYQKSCN 161
++ G GT N + A + +A YNL +Y R + + QA+ Y+++
Sbjct: 80 CHELGFGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASGRGVAQDHTQALALYRRAAE 139
Query: 162 FDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDD--GQA 204
AK + E+G L H A +Y ++ D GQA
Sbjct: 140 HGHAKSMNFVARYLEQG-LAGAADPHAARAWYRRSAEAGDFRGQA 183
Score = 43.1 bits (100), Expect = 0.005
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 2/160 (1%)
Query: 151 QAVTYYQKSCNFDMAKGCYVLGVAYEKGFLEVKQSNHKAVIYYLKACRLDDGQACRALGS 210
QAV +K+ + +L Y +G V +A+++Y A +A LG
Sbjct: 21 QAVALLRKAADRQDVAAQLLLAQLYAEG-RGVAADPIQAMLWYEVAANAGHPEAMNQLGR 79
Query: 211 LFENGDAGLDEDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKKDPQKAFNFFKQAC 270
E G G + E+A + ++A G +L +Y GR V +D +A +++A
Sbjct: 80 CHELG-FGTPCNLELAALWFRRAAAHGLDWGMYNLAHLYASGRGVAQDHTQALALYRRAA 138
Query: 271 DMGSAVSCSRMGFMYSQGDAVPKDLRKALDNYERGCDMGD 310
+ G A S + + QG A D A Y R + GD
Sbjct: 139 EHGHAKSMNFVARYLEQGLAGAADPHAARAWYRRSAEAGD 178
>gb|AAH09945.1|AAH09945 (BC009945) Unknown (protein for IMAGE:4123572) [Homo sapiens]
Length = 705
Score = 43.1 bits (100), Expect = 0.005
Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 21/265 (7%)
Query: 67 IIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKAC 126
I+ GQG + + + ALE K A + GLG Y + +NY +A + KA
Sbjct: 308 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHK---FKKNYAKAAKYWLKAE 364
Query: 127 VLKHPESCYNLGIIY-DRKIKG----NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLE 181
+ +P++ YNLG+++ D G N A Y+ K+ +G + Y G LE
Sbjct: 365 EMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLE 424
Query: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENG-DAGLDEDFEVAFDYLQKACGLNNSG 240
+ + + + K +G LG + G +A L+ + A Y A
Sbjct: 425 TFPRDPEKAVVWAKHVAEKNGY----LGHVIRKGLNAYLEGSWHEALLYYVLAAETGIEV 480
Query: 241 GCASLGSMY-----MLGRYVKKD-PQKAFNFFKQACDMGSAVSCSRMGFMYSQG-DAVPK 293
+L + + RY+ + + +NF D S + +MG +Y G +
Sbjct: 481 SQTNLAHICEERPDLARRYLGVNCVWRYYNFSVFQIDAPS-FAYLKMGDLYYYGHQNQSQ 539
Query: 294 DLRKALDNYERGCDMGDEVGCFALA 318
DL ++ Y + GD G F LA
Sbjct: 540 DLELSVQMYAQAALDGDSQGFFNLA 564
>ref|XP_045277.1| (XM_045277) KIAA0746 protein [Homo sapiens]
Length = 979
Score = 43.1 bits (100), Expect = 0.005
Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 21/265 (7%)
Query: 67 IIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKAC 126
I+ GQG + + + ALE K A + GLG Y + +NY +A + KA
Sbjct: 582 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHK---FKKNYAKAAKYWLKAE 638
Query: 127 VLKHPESCYNLGIIY-DRKIKG----NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLE 181
+ +P++ YNLG+++ D G N A Y+ K+ +G + Y G LE
Sbjct: 639 EMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLE 698
Query: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENG-DAGLDEDFEVAFDYLQKACGLNNSG 240
+ + + + K +G LG + G +A L+ + A Y A
Sbjct: 699 TFPRDPEKAVVWAKHVAEKNGY----LGHVIRKGLNAYLEGSWHEALLYYVLAAETGIEV 754
Query: 241 GCASLGSMY-----MLGRYVKKD-PQKAFNFFKQACDMGSAVSCSRMGFMYSQG-DAVPK 293
+L + + RY+ + + +NF D S + +MG +Y G +
Sbjct: 755 SQTNLAHICEERPDLARRYLGVNCVWRYYNFSVFQIDAPS-FAYLKMGDLYYYGHQNQSQ 813
Query: 294 DLRKALDNYERGCDMGDEVGCFALA 318
DL ++ Y + GD G F LA
Sbjct: 814 DLELSVQMYAQAALDGDSQGFFNLA 838
>dbj|BAA34466.1| (AB018289) KIAA0746 protein [Homo sapiens]
Length = 1029
Score = 43.1 bits (100), Expect = 0.005
Identities = 64/265 (24%), Positives = 107/265 (40%), Gaps = 21/265 (7%)
Query: 67 IIYENGQGTRIDYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKAC 126
I+ GQG + + + ALE K A + GLG Y + +NY +A + KA
Sbjct: 632 IVLFKGQGVKKNRRLALELMKKAASKGLHQAVNGLGWYYHK---FKKNYAKAAKYWLKAE 688
Query: 127 VLKHPESCYNLGIIY-DRKIKG----NADQAVTYYQKSCNFDMAKGCYVLGVAYEKGFLE 181
+ +P++ YNLG+++ D G N A Y+ K+ +G + Y G LE
Sbjct: 689 EMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQGGHMEGTLWCSLYYITGNLE 748
Query: 182 VKQSNHKAVIYYLKACRLDDGQACRALGSLFENG-DAGLDEDFEVAFDYLQKACGLNNSG 240
+ + + + K +G LG + G +A L+ + A Y A
Sbjct: 749 TFPRDPEKAVVWAKHVAEKNGY----LGHVIRKGLNAYLEGSWHEALLYYVLAAETGIEV 804
Query: 241 GCASLGSMY-----MLGRYVKKD-PQKAFNFFKQACDMGSAVSCSRMGFMYSQG-DAVPK 293
+L + + RY+ + + +NF D S + +MG +Y G +
Sbjct: 805 SQTNLAHICEERPDLARRYLGVNCVWRYYNFSVFQIDAPS-FAYLKMGDLYYYGHQNQSQ 863
Query: 294 DLRKALDNYERGCDMGDEVGCFALA 318
DL ++ Y + GD G F LA
Sbjct: 864 DLELSVQMYAQAALDGDSQGFFNLA 888
>ref|NP_011022.1| (NC_001137) sporulation-specific homolog of csd4; Shc1p
[Saccharomyces cerevisiae]
sp|P39000|YES6_YEAST HYPOTHETICAL 56.6 KD PROTEIN IN RAD51-UBP9 INTERGENIC REGION
pir||S50599 SHC1 protein - yeast (Saccharomyces cerevisiae)
gb|AAB64651.1| (U18839) Yer096wp [Saccharomyces cerevisiae]
Length = 512
Score = 42.7 bits (99), Expect = 0.006
Identities = 46/200 (23%), Positives = 81/200 (40%), Gaps = 13/200 (6%)
Query: 26 QDNSFLGVAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEY 85
+ NSF + K Y + A KK G + LG Y +G +I ++A
Sbjct: 288 ESNSFSVDSLKEYLVND---AKVILKKLSAVGYPDAQYLLGDAYSSGVFGKIKNRRAFLL 344
Query: 86 YKTACQADDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYNLGIIYDRKI 145
+ A + E + Y+ GLG T+N +A++ A HP + Y LG+ +
Sbjct: 345 FSAAAKRMHIESVYRTAICYECGLGVTRNAPKAVNFLTFAATKNHPAAMYKLGVYSYHGL 404
Query: 146 KGNADQAVT------YYQKSCNFDMAKGC---YVLGVAYEKGFLEVKQSN-HKAVIYYLK 195
G D +T + +++ + + C + L Y G+ ++ S+ A+ Y K
Sbjct: 405 MGLPDDILTKMDGYRWLRRATSMASSFVCGAPFELANIYMTGYKDLIISDPDYAMALYEK 464
Query: 196 ACRLDDGQACRALGSLFENG 215
A L ++ R L +G
Sbjct: 465 AAALGHTESARILEDARRSG 484
>gb|AAL47061.1|AF326613_1 (AF326613) JHP318-like protein [Helicobacter pylori]
Length = 46
Score = 42.7 bits (99), Expect = 0.006
Identities = 18/37 (48%), Positives = 26/37 (69%)
Query: 221 EDFEVAFDYLQKACGLNNSGGCASLGSMYMLGRYVKK 257
+D+ A Y +KACGLNN GGC +L +Y+ G+ V+K
Sbjct: 9 KDYIQAKKYFEKACGLNNGGGCGALAVLYINGQGVEK 45
>gb|AAL83953.1|AF354056_1 (AF354056) temperature-induced protein [Helicobacter pylori]
Length = 112
Score = 42.7 bits (99), Expect = 0.006
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 38 YKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENG---QGTRIDYKKALEYYKT--ACQA 92
Y ++++A YF+KAC ++GCT L IY + R +KALE+ T AC+
Sbjct: 40 YTDKDFTRAKEYFEKACRLNDADGCTILREIYSKAIMRENARESIEKALEHTATAKACEL 99
Query: 93 DDREGC 98
+ RE C
Sbjct: 100 ELREAC 105
Score = 42.4 bits (98), Expect = 0.008
Identities = 25/73 (34%), Positives = 44/73 (60%), Gaps = 10/73 (13%)
Query: 78 DYKKALEYYKTACQADDREGCFGLGGLYDEGLGTTQNYQEAID------AYAKACVLKHP 131
D+ +A EY++ AC+ +D +GC L +Y + + +N +E+I+ A AKAC L+
Sbjct: 44 DFTRAKEYFEKACRLNDADGCTILREIYSKAI-MRENARESIEKALEHTATAKACELELR 102
Query: 132 ESCYNLGIIYDRK 144
E+C GI+ ++K
Sbjct: 103 EAC---GILKEQK 112
>ref|NP_290711.1| (NC_002655) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
ref|NP_313087.1| (NC_002695) hypothetical protein [Escherichia coli O157:H7]
ref|NP_418502.1| (NC_000913) orf, hypothetical protein [Escherichia coli K12]
sp|P32713|YJCO_ECOLI Hypothetical protein yjcO precursor
pir||E65216 hypothetical 25.1 kD protein in gltp-fdhf intergenic region -
Escherichia coli (strain K-12)
gb|AAC43172.1| (U00006) No definition line found [Escherichia coli]
gb|AAD13461.1| (AE000481) orf, hypothetical protein [Escherichia coli K12]
gb|AAG59276.1|AE005641_1 (AE005641) orf, hypothetical protein [Escherichia coli O157:H7
EDL933]
dbj|BAB38483.1| (AP002568) hypothetical protein [Escherichia coli O157:H7]
Length = 229
Score = 42.7 bits (99), Expect = 0.006
Identities = 45/175 (25%), Positives = 79/175 (44%), Gaps = 13/175 (7%)
Query: 33 VAEKAYKSGNYSKATSYFKKACNDGVSEGCTQLGIIYENGQGTRIDYKKALEYYKTACQA 92
+A+ + SG+ SKA + +KA + G ++ C L I + +DY +A + A QA
Sbjct: 41 LADSWFSSGDLSKAEYWAQKAADSGDADACALLAQI-KITNPVSLDYPQAKVLAEKAAQA 99
Query: 93 DDREGCFGLGGLYDEGLGTTQNYQEAIDAYAKACVLKHPESCYN----LGIIYDR--KIK 146
+EG L + +Y +AI A +S + LG+IY IK
Sbjct: 100 GSKEGEVTLAHILVNTQAGKPDYPKAISLLENASEDLENDSAVDAQMLLGLIYANGVGIK 159
Query: 147 GNADQAVTYYQKSCNFD-MAKGCYVLGVAY---EKGFLEVKQSNHKAVIYYLKAC 197
+ D+A Y+++S Y G+ + E+GF+E ++ KA+ + +C
Sbjct: 160 ADDDKATWYFKRSSAISRTGYSEYWAGMMFLNGEEGFIE--KNKQKALHWLNLSC 212
Database: /home/scwang/download_20020708_db/nr
Posted date: Aug 7, 2002 12:55 PM
Number of letters in database: 324,149,939
Number of sequences in database: 1,026,957
Lambda K H
0.321 0.139 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 238,125,230
Number of Sequences: 1026957
Number of extensions: 10373599
Number of successful extensions: 20466
Number of sequences better than 1.0e-02: 139
Number of HSP's better than 0.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 18644
Number of HSP's gapped (non-prelim): 680
length of query: 355
length of database: 324,149,939
effective HSP length: 122
effective length of query: 233
effective length of database: 198,861,185
effective search space: 46334656105
effective search space used: 46334656105
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 98 (42.4 bits)